X-63406040-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24063406040
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24063406040
    reference: chr 0
allele count: 2
allele frequency: 2.293157218858925e-5
allele num: 87216
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000384722
  ensembl transcript: ENST00000403336
  gene symbol: AMER1
  hgvsc: ENST00000403336.1:c.2372C>T
  hgvsp: ENSP00000384722.1:p.Thr791Ile
  variant of: http://identifiers.org/hgnc/26837
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000364003
  ensembl transcript: ENST00000374869
  gene symbol: AMER1
  hgvsc: ENST00000374869.3:c.2372C>T
  hgvsp: ENSP00000364003.3:p.Thr791Ile
  variant of: http://identifiers.org/hgnc/26837
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000329117
  ensembl transcript: ENST00000330258
  gene symbol: AMER1
  hgvsc: ENST00000330258.3:c.*3719C>T
  variant of: http://identifiers.org/hgnc/26837
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.75e1
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genotype depth: GenotypeDepth
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  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 868
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 3.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 7.75e1
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 8.25e1
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genotype quality: GenotypeQuality
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  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Thr791Ile
num of homozygotes: 0
population: East Asian
population: Other
population: Latino
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff

X-63406049-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24063406049
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24063406049
    reference: chr 0
allele count: 1
allele frequency: 1.14681529392876e-5
allele num: 87198
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000364003
  ensembl transcript: ENST00000374869
  gene symbol: AMER1
  hgvsc: ENST00000374869.3:c.2363G>T
  hgvsp: ENSP00000364003.3:p.Cys788Phe
  variant of: http://identifiers.org/hgnc/26837
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000329117
  ensembl transcript: ENST00000330258
  gene symbol: AMER1
  hgvsc: ENST00000330258.3:c.*3710G>T
  variant of: http://identifiers.org/hgnc/26837
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000384722
  ensembl transcript: ENST00000403336
  gene symbol: AMER1
  hgvsc: ENST00000403336.1:c.2363G>T
  hgvsp: ENSP00000384722.1:p.Cys788Phe
  variant of: http://identifiers.org/hgnc/26837
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4969
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 505
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 1105
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 2787
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Cys788Phe
num of homozygotes: 0
population: Other
population: African
population: South Asian
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum

X-63406050-ATCT-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24063406050
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24063406047
    reference: chr 0
allele count: 10
allele frequency: 1.146762688929153e-4
allele num: 87202
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  consequence: splice_region_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000384722
  ensembl transcript: ENST00000403336
  gene symbol: AMER1
  hgvsc: ENST00000403336.1:c.2359_2361delAGA
  hgvsp: ENSP00000384722.1:p.Arg787del
  variant of: http://identifiers.org/hgnc/26837
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000329117
  ensembl transcript: ENST00000330258
  gene symbol: AMER1
  hgvsc: ENST00000330258.3:c.*3706_*3708delAGA
  variant of: http://identifiers.org/hgnc/26837
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  consequence: splice_region_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000364003
  ensembl transcript: ENST00000374869
  gene symbol: AMER1
  hgvsc: ENST00000374869.3:c.2359_2361delAGA
  hgvsp: ENSP00000364003.3:p.Arg787del
  variant of: http://identifiers.org/hgnc/26837
canonical: false
consequence: inframe deletion
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 23819
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2720
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 505
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 1
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 2
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 2
genotype depth: GenotypeDepth
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  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
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  variant carriers: 1
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 160
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  variant carriers: 0
hgvs: p.Arg787del
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: European (Finnish)
population: South Asian
reference allele: ATCT
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD

X-63406056-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24063406056
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24063406056
    reference: chr 0
allele count: 1
allele frequency: 1.146973137889111e-5
allele num: 87186
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000329117
  ensembl transcript: ENST00000330258
  gene symbol: AMER1
  hgvsc: ENST00000330258.3:c.*3703A>G
  variant of: http://identifiers.org/hgnc/26837
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000364003
  ensembl transcript: ENST00000374869
  gene symbol: AMER1
  hgvsc: ENST00000374869.3:c.2358-2A>G
  variant of: http://identifiers.org/hgnc/26837
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000384722
  ensembl transcript: ENST00000403336
  gene symbol: AMER1
  hgvsc: ENST00000403336.1:c.2358-2A>G
  variant of: http://identifiers.org/hgnc/26837
canonical: false
consequence: splice acceptor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 2289
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3287
  bin: 7.75e1
  variant carriers: 0
hgvs: c.2358-2A>G
num of homozygotes: 0
population: Latino
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: T
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum

X-63406063-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24063406063
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24063406063
    reference: chr 0
allele count: 1
allele frequency: 1.14740743290535e-5
allele num: 87153
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000364003
  ensembl transcript: ENST00000374869
  gene symbol: AMER1
  hgvsc: ENST00000374869.3:c.2358-9G>A
  variant of: http://identifiers.org/hgnc/26837
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000329117
  ensembl transcript: ENST00000330258
  gene symbol: AMER1
  hgvsc: ENST00000330258.3:c.*3696G>A
  variant of: http://identifiers.org/hgnc/26837
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000384722
  ensembl transcript: ENST00000403336
  gene symbol: AMER1
  hgvsc: ENST00000403336.1:c.2358-9G>A
  variant of: http://identifiers.org/hgnc/26837
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
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  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
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  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7211
  bin: 3.25e1
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genotype depth: GenotypeDepth
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  bin: 2.75e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.25e1
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genotype depth: GenotypeDepth
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  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.75e1
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genotype depth: GenotypeDepth
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  bin: 7.5e0
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1105
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4971
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
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genotype depth: GenotypeDepth
  all individuals: 506
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genotype depth: GenotypeDepth
  all individuals: 867
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 2.75e1
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genotype quality: GenotypeQuality
  all individuals: 27
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genotype quality: GenotypeQuality
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  bin: 3.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 5860
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genotype quality: GenotypeQuality
  all individuals: 2782
  bin: 8.25e1
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genotype quality: GenotypeQuality
  all individuals: 53
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: South Asian
population: East Asian
population: African
population: European (Finnish)
population: Latino
reference allele: C
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: FS

X-63406070-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24063406070
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24063406070
    reference: chr 0
allele count: 1
allele frequency: 1.147657630775587e-5
allele num: 87134
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000384722
  ensembl transcript: ENST00000403336
  gene symbol: AMER1
  hgvsc: ENST00000403336.1:c.2358-16A>G
  variant of: http://identifiers.org/hgnc/26837
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000364003
  ensembl transcript: ENST00000374869
  gene symbol: AMER1
  hgvsc: ENST00000374869.3:c.2358-16A>G
  variant of: http://identifiers.org/hgnc/26837
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000329117
  ensembl transcript: ENST00000330258
  gene symbol: AMER1
  hgvsc: ENST00000330258.3:c.*3689A>G
  variant of: http://identifiers.org/hgnc/26837
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2344
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  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: East Asian
population: Latino
population: European (Non-Finnish)
population: South Asian
population: African
reference allele: T
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum

X-63406071-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24063406071
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24063406071
    reference: chr 0
allele count: 1
allele frequency: 1.147802532052386e-5
allele num: 87123
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000384722
  ensembl transcript: ENST00000403336
  gene symbol: AMER1
  hgvsc: ENST00000403336.1:c.2358-17C>G
  variant of: http://identifiers.org/hgnc/26837
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000329117
  ensembl transcript: ENST00000330258
  gene symbol: AMER1
  hgvsc: ENST00000330258.3:c.*3688C>G
  variant of: http://identifiers.org/hgnc/26837
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000364003
  ensembl transcript: ENST00000374869
  gene symbol: AMER1
  hgvsc: ENST00000374869.3:c.2358-17C>G
  variant of: http://identifiers.org/hgnc/26837
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 506
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 727
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 369
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 5834
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: African
population: Other
population: Latino
population: European (Finnish)
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: DP

X-63406071-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24063406071
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24063406071
    reference: chr 0
allele count: 3
allele frequency: 3.443407596157157e-5
allele num: 87123
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000329117
  ensembl transcript: ENST00000330258
  gene symbol: AMER1
  hgvsc: ENST00000330258.3:c.*3688C>A
  variant of: http://identifiers.org/hgnc/26837
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000384722
  ensembl transcript: ENST00000403336
  gene symbol: AMER1
  hgvsc: ENST00000403336.1:c.2358-17C>A
  variant of: http://identifiers.org/hgnc/26837
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000364003
  ensembl transcript: ENST00000374869
  gene symbol: AMER1
  hgvsc: ENST00000374869.3:c.2358-17C>A
  variant of: http://identifiers.org/hgnc/26837
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4987
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 217
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
population: South Asian
reference allele: G
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum

X-63406072-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24063406072
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24063406072
    reference: chr 0
allele count: 1
allele frequency: 1.147842056932966e-5
allele num: 87120
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000384722
  ensembl transcript: ENST00000403336
  gene symbol: AMER1
  hgvsc: ENST00000403336.1:c.2358-18C>G
  variant of: http://identifiers.org/hgnc/26837
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000364003
  ensembl transcript: ENST00000374869
  gene symbol: AMER1
  hgvsc: ENST00000374869.3:c.2358-18C>G
  variant of: http://identifiers.org/hgnc/26837
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000329117
  ensembl transcript: ENST00000330258
  gene symbol: AMER1
  hgvsc: ENST00000330258.3:c.*3687C>G
  variant of: http://identifiers.org/hgnc/26837
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 494
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11440
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1105
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: East Asian
population: Latino
population: European (Finnish)
population: South Asian
population: African
reference allele: G
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
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site quality: DP
site quality: FS
site quality: MQ
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X-63406076-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24063406076
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24063406076
    reference: chr 0
allele count: 1
allele frequency: 1.147881584535739e-5
allele num: 87117
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000329117
  ensembl transcript: ENST00000330258
  gene symbol: AMER1
  hgvsc: ENST00000330258.3:c.*3683C>T
  variant of: http://identifiers.org/hgnc/26837
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000364003
  ensembl transcript: ENST00000374869
  gene symbol: AMER1
  hgvsc: ENST00000374869.3:c.2358-22C>T
  variant of: http://identifiers.org/hgnc/26837
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000384722
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  gene symbol: AMER1
  hgvsc: ENST00000403336.1:c.2358-22C>T
  variant of: http://identifiers.org/hgnc/26837
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Other
reference allele: G
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: FS

X-63406083-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24063406083
    reference: chr 0
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    type: ExactPosition
    position: 24063406083
    reference: chr 0
allele count: 9
allele frequency: 1.033710446218343e-4
allele num: 87065
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000329117
  ensembl transcript: ENST00000330258
  gene symbol: AMER1
  hgvsc: ENST00000330258.3:c.*3676G>A
  variant of: http://identifiers.org/hgnc/26837
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000364003
  ensembl transcript: ENST00000374869
  gene symbol: AMER1
  hgvsc: ENST00000374869.3:c.2358-29G>A
  variant of: http://identifiers.org/hgnc/26837
annotation: Annotation
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  consequence: intron_variant
  ensembl gene: ENSG00000184675
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  gene symbol: AMER1
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  variant of: http://identifiers.org/hgnc/26837
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
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population: African
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: East Asian
population: Latino
population: Other
reference allele: C
site quality: FS
site quality: QD
site quality: DP
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site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
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X-63406084-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24063406084
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24063406084
    reference: chr 0
allele count: 5
allele frequency: 5.742637938163275e-5
allele num: 87068
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000384722
  ensembl transcript: ENST00000403336
  gene symbol: AMER1
  hgvsc: ENST00000403336.1:c.2358-30C>T
  variant of: http://identifiers.org/hgnc/26837
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000329117
  ensembl transcript: ENST00000330258
  gene symbol: AMER1
  hgvsc: ENST00000330258.3:c.*3675C>T
  variant of: http://identifiers.org/hgnc/26837
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000364003
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  gene symbol: AMER1
  hgvsc: ENST00000374869.3:c.2358-30C>T
  variant of: http://identifiers.org/hgnc/26837
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
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population: European (Finnish)
population: European (Non-Finnish)
population: Other
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population: Latino
population: South Asian
population: African
reference allele: G
site quality: BaseQRankSum
site quality: ClippingRankSum
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X-63406097-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24063406097
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24063406097
    reference: chr 0
allele count: 1
allele frequency: 1.150178852811612e-5
allele num: 86943
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000384722
  ensembl transcript: ENST00000403336
  gene symbol: AMER1
  hgvsc: ENST00000403336.1:c.2358-43G>A
  variant of: http://identifiers.org/hgnc/26837
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000364003
  ensembl transcript: ENST00000374869
  gene symbol: AMER1
  hgvsc: ENST00000374869.3:c.2358-43G>A
  variant of: http://identifiers.org/hgnc/26837
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000329117
  ensembl transcript: ENST00000330258
  gene symbol: AMER1
  hgvsc: ENST00000330258.3:c.*3662G>A
  variant of: http://identifiers.org/hgnc/26837
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: African
population: East Asian
population: Other
population: South Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
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site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
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site quality: DP

X-63406102-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24063406102
    reference: chr 0
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    type: ExactPosition
    position: 24063406102
    reference: chr 0
allele count: 1
allele frequency: 1.150496439213521e-5
allele num: 86919
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000384722
  ensembl transcript: ENST00000403336
  gene symbol: AMER1
  hgvsc: ENST00000403336.1:c.2358-48T>C
  variant of: http://identifiers.org/hgnc/26837
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000364003
  ensembl transcript: ENST00000374869
  gene symbol: AMER1
  hgvsc: ENST00000374869.3:c.2358-48T>C
  variant of: http://identifiers.org/hgnc/26837
annotation: Annotation
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  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000329117
  ensembl transcript: ENST00000330258
  gene symbol: AMER1
  hgvsc: ENST00000330258.3:c.*3657T>C
  variant of: http://identifiers.org/hgnc/26837
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: East Asian
population: Other
population: Latino
population: South Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
reference allele: A
site quality: ClippingRankSum
site quality: MQ
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site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff

X-63409709-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24063409709
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24063409709
    reference: chr 0
allele count: 0
allele frequency: 0.0e0
allele num: 41122
alternate allele: T
annotation: Annotation
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  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000384722
  ensembl transcript: ENST00000403336
  gene symbol: AMER1
  hgvsc: ENST00000403336.1:c.2357+1101G>A
  variant of: http://identifiers.org/hgnc/26837
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000329117
  ensembl transcript: ENST00000330258
  gene symbol: AMER1
  hgvsc: ENST00000330258.3:c.*50G>A
  variant of: http://identifiers.org/hgnc/26837
annotation: Annotation
  canonical: false
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  gene symbol: AMER1
  hgvsc: ENST00000374869.3:c.2357+1101G>A
  variant of: http://identifiers.org/hgnc/26837
canonical: true
consequence: 3' UTR
filter: AC_Adj0_Filter
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population: African
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Latino
population: South Asian
reference allele: C
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: InbreedingCoeff

X-63409728-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24063409728
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24063409728
    reference: chr 0
allele count: 0
allele frequency: 0.0e0
allele num: 44690
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000384722
  ensembl transcript: ENST00000403336
  gene symbol: AMER1
  hgvsc: ENST00000403336.1:c.2357+1082G>T
  variant of: http://identifiers.org/hgnc/26837
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000364003
  ensembl transcript: ENST00000374869
  gene symbol: AMER1
  hgvsc: ENST00000374869.3:c.2357+1082G>T
  variant of: http://identifiers.org/hgnc/26837
annotation: Annotation
  canonical: true
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  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000329117
  ensembl transcript: ENST00000330258
  gene symbol: AMER1
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  variant of: http://identifiers.org/hgnc/26837
canonical: true
consequence: 3' UTR
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num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Other
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population: Latino
reference allele: C
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: DP

X-63409731-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24063409731
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24063409731
    reference: chr 0
allele count: 2
allele frequency: 4.362240446693422e-5
allele num: 45848
alternate allele: A
annotation: Annotation
  canonical: true
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  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000329117
  ensembl transcript: ENST00000330258
  gene symbol: AMER1
  hgvsc: ENST00000330258.3:c.*28G>T
  variant of: http://identifiers.org/hgnc/26837
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000364003
  ensembl transcript: ENST00000374869
  gene symbol: AMER1
  hgvsc: ENST00000374869.3:c.2357+1079G>T
  variant of: http://identifiers.org/hgnc/26837
annotation: Annotation
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  gene symbol: AMER1
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  variant of: http://identifiers.org/hgnc/26837
canonical: true
consequence: 3' UTR
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genotype quality: GenotypeQuality
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  bin: 2.5e0
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genotype quality: GenotypeQuality
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  bin: 6.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 2796
  bin: 2.75e1
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genotype quality: GenotypeQuality
  all individuals: 392
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 610
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: Latino
population: South Asian
population: European (Finnish)
population: African
population: East Asian
reference allele: C
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum

X-63409731-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24063409731
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24063409731
    reference: chr 0
allele count: 2
allele frequency: 4.362240446693422e-5
allele num: 45848
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000364003
  ensembl transcript: ENST00000374869
  gene symbol: AMER1
  hgvsc: ENST00000374869.3:c.2357+1079G>A
  variant of: http://identifiers.org/hgnc/26837
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000329117
  ensembl transcript: ENST00000330258
  gene symbol: AMER1
  hgvsc: ENST00000330258.3:c.*28G>A
  variant of: http://identifiers.org/hgnc/26837
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000384722
  ensembl transcript: ENST00000403336
  gene symbol: AMER1
  hgvsc: ENST00000403336.1:c.2357+1079G>A
  variant of: http://identifiers.org/hgnc/26837
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 25078
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 2
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 98
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: African
population: East Asian
population: South Asian
population: Latino
population: European (Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: QD

X-63409732-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24063409732
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24063409732
    reference: chr 0
allele count: 3
allele frequency: 6.443160585038982e-5
allele num: 46561
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000384722
  ensembl transcript: ENST00000403336
  gene symbol: AMER1
  hgvsc: ENST00000403336.1:c.2357+1078C>T
  variant of: http://identifiers.org/hgnc/26837
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000364003
  ensembl transcript: ENST00000374869
  gene symbol: AMER1
  hgvsc: ENST00000374869.3:c.2357+1078C>T
  variant of: http://identifiers.org/hgnc/26837
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000329117
  ensembl transcript: ENST00000330258
  gene symbol: AMER1
  hgvsc: ENST00000330258.3:c.*27C>T
  variant of: http://identifiers.org/hgnc/26837
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 1
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 17939
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: East Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: South Asian
reference allele: G
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: VQSLOD

X-63409735-TCC-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24063409735
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24063409733
    reference: chr 0
allele count: 1
allele frequency: 2.082812630175789e-5
allele num: 48012
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000329117
  ensembl transcript: ENST00000330258
  gene symbol: AMER1
  hgvsc: ENST00000330258.3:c.*22_*23delGG
  variant of: http://identifiers.org/hgnc/26837
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000384722
  ensembl transcript: ENST00000403336
  gene symbol: AMER1
  hgvsc: ENST00000403336.1:c.2357+1073_2357+1074delGG
  variant of: http://identifiers.org/hgnc/26837
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000364003
  ensembl transcript: ENST00000374869
  gene symbol: AMER1
  hgvsc: ENST00000374869.3:c.2357+1073_2357+1074delGG
  variant of: http://identifiers.org/hgnc/26837
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 1
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Other
population: African
population: European (Non-Finnish)
population: Latino
population: East Asian
reference allele: TCC
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: QD

X-63409740-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24063409740
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24063409740
    reference: chr 0
allele count: 1
allele frequency: 1.983182611454863e-5
allele num: 50424
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000364003
  ensembl transcript: ENST00000374869
  gene symbol: AMER1
  hgvsc: ENST00000374869.3:c.2357+1070T>C
  variant of: http://identifiers.org/hgnc/26837
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000384722
  ensembl transcript: ENST00000403336
  gene symbol: AMER1
  hgvsc: ENST00000403336.1:c.2357+1070T>C
  variant of: http://identifiers.org/hgnc/26837
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000329117
  ensembl transcript: ENST00000330258
  gene symbol: AMER1
  hgvsc: ENST00000330258.3:c.*19T>C
  variant of: http://identifiers.org/hgnc/26837
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4104
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Finnish)
population: African
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: A
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff

X-63409752-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24063409752
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24063409752
    reference: chr 0
allele count: 4
allele frequency: 7.315556530963093e-5
allele num: 54678
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000329117
  ensembl transcript: ENST00000330258
  gene symbol: AMER1
  hgvsc: ENST00000330258.3:c.*7T>C
  variant of: http://identifiers.org/hgnc/26837
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000364003
  ensembl transcript: ENST00000374869
  gene symbol: AMER1
  hgvsc: ENST00000374869.3:c.2357+1058T>C
  variant of: http://identifiers.org/hgnc/26837
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000384722
  ensembl transcript: ENST00000403336
  gene symbol: AMER1
  hgvsc: ENST00000403336.1:c.2357+1058T>C
  variant of: http://identifiers.org/hgnc/26837
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
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  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 1
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 949
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 3.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 595
  bin: 5.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 2.5e0
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 329
  bin: 9.75e1
  variant carriers: 3
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
population: African
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: ClippingRankSum

X-63409755-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24063409755
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24063409755
    reference: chr 0
allele count: 1
allele frequency: 1.810872478360074e-5
allele num: 55222
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000384722
  ensembl transcript: ENST00000403336
  gene symbol: AMER1
  hgvsc: ENST00000403336.1:c.2357+1055T>C
  variant of: http://identifiers.org/hgnc/26837
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000329117
  ensembl transcript: ENST00000330258
  gene symbol: AMER1
  hgvsc: ENST00000330258.3:c.*4T>C
  variant of: http://identifiers.org/hgnc/26837
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000364003
  ensembl transcript: ENST00000374869
  gene symbol: AMER1
  hgvsc: ENST00000374869.3:c.2357+1055T>C
  variant of: http://identifiers.org/hgnc/26837
canonical: true
consequence: 3' UTR
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 22449
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 490
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  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Other
population: African
population: Latino
population: East Asian
reference allele: A
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ

X-63409759-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24063409759
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24063409759
    reference: chr 0
allele count: 66
allele frequency: 1.180363051059644e-3
allele num: 55915
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000384722
  ensembl transcript: ENST00000403336
  gene symbol: AMER1
  hgvsc: ENST00000403336.1:c.2357+1051G>A
  variant of: http://identifiers.org/hgnc/26837
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000364003
  ensembl transcript: ENST00000374869
  gene symbol: AMER1
  hgvsc: ENST00000374869.3:c.2357+1051G>A
  variant of: http://identifiers.org/hgnc/26837
annotation: Annotation
  canonical: true
  consequence: stop_retained_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000329117
  ensembl transcript: ENST00000330258
  gene symbol: AMER1
  hgvsc: ENST00000330258.3:c.3408G>A
  hgvsp: ENST00000330258.3:c.3408G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/26837
canonical: true
consequence: stop retained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 74
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  variant carriers: 0
hgvs: p.Ter1136Ter
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: Other
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: FS
site quality: InbreedingCoeff

X-63409760-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24063409760
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24063409760
    reference: chr 0
allele count: 1
allele frequency: 1.780848752515449e-5
allele num: 56153
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: stop_lost
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000329117
  ensembl transcript: ENST00000330258
  gene symbol: AMER1
  hgvsc: ENST00000330258.3:c.3407A>T
  hgvsp: ENSP00000329117.3:p.Ter1136LeuextTer7
  variant of: http://identifiers.org/hgnc/26837
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000384722
  ensembl transcript: ENST00000403336
  gene symbol: AMER1
  hgvsc: ENST00000403336.1:c.2357+1050A>T
  variant of: http://identifiers.org/hgnc/26837
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000364003
  ensembl transcript: ENST00000374869
  gene symbol: AMER1
  hgvsc: ENST00000374869.3:c.2357+1050A>T
  variant of: http://identifiers.org/hgnc/26837
canonical: true
consequence: stop lost
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 23593
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 379
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  variant carriers: 0
hgvs: p.Ter1136LeuextTer7
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: Other
population: South Asian
population: African
population: East Asian
population: European (Non-Finnish)
reference allele: T
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum

X-63409772-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24063409772
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24063409772
    reference: chr 0
allele count: 1
allele frequency: 1.742706772158517e-5
allele num: 57382
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000329117
  ensembl transcript: ENST00000330258
  gene symbol: AMER1
  hgvsc: ENST00000330258.3:c.3395A>G
  hgvsp: ENSP00000329117.3:p.Asn1132Ser
  variant of: http://identifiers.org/hgnc/26837
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000364003
  ensembl transcript: ENST00000374869
  gene symbol: AMER1
  hgvsc: ENST00000374869.3:c.2357+1038A>G
  variant of: http://identifiers.org/hgnc/26837
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000384722
  ensembl transcript: ENST00000403336
  gene symbol: AMER1
  hgvsc: ENST00000403336.1:c.2357+1038A>G
  variant of: http://identifiers.org/hgnc/26837
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
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  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1693
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Asn1132Ser
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Other
population: African
population: East Asian
population: Latino
reference allele: T
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum

X-63409784-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24063409784
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24063409784
    reference: chr 0
allele count: 2
allele frequency: 3.458292986581823e-5
allele num: 57832
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000364003
  ensembl transcript: ENST00000374869
  gene symbol: AMER1
  hgvsc: ENST00000374869.3:c.2357+1026C>T
  variant of: http://identifiers.org/hgnc/26837
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000384722
  ensembl transcript: ENST00000403336
  gene symbol: AMER1
  hgvsc: ENST00000403336.1:c.2357+1026C>T
  variant of: http://identifiers.org/hgnc/26837
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000329117
  ensembl transcript: ENST00000330258
  gene symbol: AMER1
  hgvsc: ENST00000330258.3:c.3383C>T
  hgvsp: ENSP00000329117.3:p.Ala1128Val
  variant of: http://identifiers.org/hgnc/26837
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2012
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Ala1128Val
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD

X-63409790-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24063409790
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24063409790
    reference: chr 0
allele count: 0
allele frequency: 0.0e0
allele num: 57950
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000329117
  ensembl transcript: ENST00000330258
  gene symbol: AMER1
  hgvsc: ENST00000330258.3:c.3377C>G
  hgvsp: ENSP00000329117.3:p.Ser1126Cys
  variant of: http://identifiers.org/hgnc/26837
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000364003
  ensembl transcript: ENST00000374869
  gene symbol: AMER1
  hgvsc: ENST00000374869.3:c.2357+1020C>G
  variant of: http://identifiers.org/hgnc/26837
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000384722
  ensembl transcript: ENST00000403336
  gene symbol: AMER1
  hgvsc: ENST00000403336.1:c.2357+1020C>G
  variant of: http://identifiers.org/hgnc/26837
canonical: true
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 6945
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 471
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  variant carriers: 0
hgvs: p.Ser1126Cys
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
population: South Asian
population: European (Finnish)
population: Other
reference allele: G
site quality: FS
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ

X-63409809-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24063409809
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24063409809
    reference: chr 0
allele count: 0
allele frequency: 0.0e0
allele num: 57531
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000329117
  ensembl transcript: ENST00000330258
  gene symbol: AMER1
  hgvsc: ENST00000330258.3:c.3358C>T
  hgvsp: ENSP00000329117.3:p.Leu1120Phe
  variant of: http://identifiers.org/hgnc/26837
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000364003
  ensembl transcript: ENST00000374869
  gene symbol: AMER1
  hgvsc: ENST00000374869.3:c.2357+1001C>T
  variant of: http://identifiers.org/hgnc/26837
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000384722
  ensembl transcript: ENST00000403336
  gene symbol: AMER1
  hgvsc: ENST00000403336.1:c.2357+1001C>T
  variant of: http://identifiers.org/hgnc/26837
canonical: true
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 106
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Leu1120Phe
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: South Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: African
reference allele: G
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: DP

X-63409813-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24063409813
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24063409813
    reference: chr 0
allele count: 1
allele frequency: 1.743283998396179e-5
allele num: 57363
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000384722
  ensembl transcript: ENST00000403336
  gene symbol: AMER1
  hgvsc: ENST00000403336.1:c.2357+997C>T
  variant of: http://identifiers.org/hgnc/26837
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000329117
  ensembl transcript: ENST00000330258
  gene symbol: AMER1
  hgvsc: ENST00000330258.3:c.3354C>T
  hgvsp: ENST00000330258.3:c.3354C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26837
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000364003
  ensembl transcript: ENST00000374869
  gene symbol: AMER1
  hgvsc: ENST00000374869.3:c.2357+997C>T
  variant of: http://identifiers.org/hgnc/26837
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
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genotype depth: GenotypeDepth
  all individuals: 20980
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 1.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 330
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Ala1118Ala
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: G
site quality: DP
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD

X-63409827-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24063409827
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24063409827
    reference: chr 0
allele count: 1
allele frequency: 1.758891194990678e-5
allele num: 56854
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000329117
  ensembl transcript: ENST00000330258
  gene symbol: AMER1
  hgvsc: ENST00000330258.3:c.3340G>T
  hgvsp: ENSP00000329117.3:p.Ala1114Ser
  variant of: http://identifiers.org/hgnc/26837
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000384722
  ensembl transcript: ENST00000403336
  gene symbol: AMER1
  hgvsc: ENST00000403336.1:c.2357+983G>T
  variant of: http://identifiers.org/hgnc/26837
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000364003
  ensembl transcript: ENST00000374869
  gene symbol: AMER1
  hgvsc: ENST00000374869.3:c.2357+983G>T
  variant of: http://identifiers.org/hgnc/26837
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
hgvs: p.Ala1114Ser
num of homozygotes: 0
population: Other
population: European (Finnish)
population: East Asian
population: Latino
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: QD

X-63409827-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24063409827
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24063409827
    reference: chr 0
allele count: 3
allele frequency: 5.276673584972034e-5
allele num: 56854
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000364003
  ensembl transcript: ENST00000374869
  gene symbol: AMER1
  hgvsc: ENST00000374869.3:c.2357+983G>A
  variant of: http://identifiers.org/hgnc/26837
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000329117
  ensembl transcript: ENST00000330258
  gene symbol: AMER1
  hgvsc: ENST00000330258.3:c.3340G>A
  hgvsp: ENSP00000329117.3:p.Ala1114Thr
  variant of: http://identifiers.org/hgnc/26837
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000384722
  ensembl transcript: ENST00000403336
  gene symbol: AMER1
  hgvsc: ENST00000403336.1:c.2357+983G>A
  variant of: http://identifiers.org/hgnc/26837
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
hgvs: p.Ala1114Thr
num of homozygotes: 0
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
population: Latino
population: South Asian
population: European (Finnish)
reference allele: C
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum

X-63409831-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24063409831
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24063409831
    reference: chr 0
allele count: 36
allele frequency: 6.321667515409064e-4
allele num: 56947
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000364003
  ensembl transcript: ENST00000374869
  gene symbol: AMER1
  hgvsc: ENST00000374869.3:c.2357+979G>A
  variant of: http://identifiers.org/hgnc/26837
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000384722
  ensembl transcript: ENST00000403336
  gene symbol: AMER1
  hgvsc: ENST00000403336.1:c.2357+979G>A
  variant of: http://identifiers.org/hgnc/26837
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000329117
  ensembl transcript: ENST00000330258
  gene symbol: AMER1
  hgvsc: ENST00000330258.3:c.3336G>A
  hgvsp: ENST00000330258.3:c.3336G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/26837
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5810
  bin: 1.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
hgvs: p.Glu1112Glu
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: Latino
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP

X-63409833-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24063409833
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24063409833
    reference: chr 0
allele count: 0
allele frequency: 0.0e0
allele num: 56954
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000384722
  ensembl transcript: ENST00000403336
  gene symbol: AMER1
  hgvsc: ENST00000403336.1:c.2357+977G>A
  variant of: http://identifiers.org/hgnc/26837
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000364003
  ensembl transcript: ENST00000374869
  gene symbol: AMER1
  hgvsc: ENST00000374869.3:c.2357+977G>A
  variant of: http://identifiers.org/hgnc/26837
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000329117
  ensembl transcript: ENST00000330258
  gene symbol: AMER1
  hgvsc: ENST00000330258.3:c.3334G>A
  hgvsp: ENSP00000329117.3:p.Glu1112Lys
  variant of: http://identifiers.org/hgnc/26837
canonical: true
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 324
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1726
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
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  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.75e1
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genotype quality: GenotypeQuality
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  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1603
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Glu1112Lys
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: African
population: European (Non-Finnish)
population: Latino
population: South Asian
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: MQ

X-63409837-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24063409837
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24063409837
    reference: chr 0
allele count: 1
allele frequency: 1.754970955230691e-5
allele num: 56981
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000364003
  ensembl transcript: ENST00000374869
  gene symbol: AMER1
  hgvsc: ENST00000374869.3:c.2357+973A>T
  variant of: http://identifiers.org/hgnc/26837
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000329117
  ensembl transcript: ENST00000330258
  gene symbol: AMER1
  hgvsc: ENST00000330258.3:c.3330A>T
  hgvsp: ENST00000330258.3:c.3330A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26837
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000384722
  ensembl transcript: ENST00000403336
  gene symbol: AMER1
  hgvsc: ENST00000403336.1:c.2357+973A>T
  variant of: http://identifiers.org/hgnc/26837
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 325
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Ser1110Ser
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: African
population: Latino
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: T
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: DP

X-63409837-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24063409837
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24063409837
    reference: chr 0
allele count: 1
allele frequency: 1.754970955230691e-5
allele num: 56981
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000329117
  ensembl transcript: ENST00000330258
  gene symbol: AMER1
  hgvsc: ENST00000330258.3:c.3330A>G
  hgvsp: ENST00000330258.3:c.3330A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/26837
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000364003
  ensembl transcript: ENST00000374869
  gene symbol: AMER1
  hgvsc: ENST00000374869.3:c.2357+973A>G
  variant of: http://identifiers.org/hgnc/26837
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000384722
  ensembl transcript: ENST00000403336
  gene symbol: AMER1
  hgvsc: ENST00000403336.1:c.2357+973A>G
  variant of: http://identifiers.org/hgnc/26837
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
hgvs: p.Ser1110Ser
num of homozygotes: 0
population: Other
population: South Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: East Asian
reference allele: T
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum

X-63409848-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24063409848
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24063409848
    reference: chr 0
allele count: 0
allele frequency: 0.0e0
allele num: 57073
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000329117
  ensembl transcript: ENST00000330258
  gene symbol: AMER1
  hgvsc: ENST00000330258.3:c.3319C>G
  hgvsp: ENSP00000329117.3:p.Leu1107Val
  variant of: http://identifiers.org/hgnc/26837
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000384722
  ensembl transcript: ENST00000403336
  gene symbol: AMER1
  hgvsc: ENST00000403336.1:c.2357+962C>G
  variant of: http://identifiers.org/hgnc/26837
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000364003
  ensembl transcript: ENST00000374869
  gene symbol: AMER1
  hgvsc: ENST00000374869.3:c.2357+962C>G
  variant of: http://identifiers.org/hgnc/26837
canonical: true
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 403
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  variant carriers: 0
hgvs: p.Leu1107Val
num of homozygotes: 0
population: European (Finnish)
population: Other
population: Latino
population: European (Non-Finnish)
population: East Asian
population: African
population: South Asian
reference allele: G
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: DP

X-63409863-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24063409863
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24063409863
    reference: chr 0
allele count: 1
allele frequency: 1.726966583196615e-5
allele num: 57905
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000329117
  ensembl transcript: ENST00000330258
  gene symbol: AMER1
  hgvsc: ENST00000330258.3:c.3304T>C
  hgvsp: ENSP00000329117.3:p.Tyr1102His
  variant of: http://identifiers.org/hgnc/26837
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000364003
  ensembl transcript: ENST00000374869
  gene symbol: AMER1
  hgvsc: ENST00000374869.3:c.2357+947T>C
  variant of: http://identifiers.org/hgnc/26837
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000384722
  ensembl transcript: ENST00000403336
  gene symbol: AMER1
  hgvsc: ENST00000403336.1:c.2357+947T>C
  variant of: http://identifiers.org/hgnc/26837
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 4816
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 9.25e1
  variant carriers: 0
hgvs: p.Tyr1102His
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: A
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP

X-63409878-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24063409878
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24063409878
    reference: chr 0
allele count: 1
allele frequency: 1.710717646052519e-5
allele num: 58455
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000384722
  ensembl transcript: ENST00000403336
  gene symbol: AMER1
  hgvsc: ENST00000403336.1:c.2357+932C>A
  variant of: http://identifiers.org/hgnc/26837
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000364003
  ensembl transcript: ENST00000374869
  gene symbol: AMER1
  hgvsc: ENST00000374869.3:c.2357+932C>A
  variant of: http://identifiers.org/hgnc/26837
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000329117
  ensembl transcript: ENST00000330258
  gene symbol: AMER1
  hgvsc: ENST00000330258.3:c.3289C>A
  hgvsp: ENSP00000329117.3:p.Pro1097Thr
  variant of: http://identifiers.org/hgnc/26837
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Pro1097Thr
num of homozygotes: 0
population: South Asian
population: Latino
population: African
population: European (Finnish)
population: Other
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: DP
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD

X-63409894-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24063409894
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24063409894
    reference: chr 0
allele count: 59
allele frequency: 9.983417374530442e-4
allele num: 59098
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000384722
  ensembl transcript: ENST00000403336
  gene symbol: AMER1
  hgvsc: ENST00000403336.1:c.2357+916G>A
  variant of: http://identifiers.org/hgnc/26837
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000329117
  ensembl transcript: ENST00000330258
  gene symbol: AMER1
  hgvsc: ENST00000330258.3:c.3273G>A
  hgvsp: ENST00000330258.3:c.3273G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/26837
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000364003
  ensembl transcript: ENST00000374869
  gene symbol: AMER1
  hgvsc: ENST00000374869.3:c.2357+916G>A
  variant of: http://identifiers.org/hgnc/26837
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
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  variant carriers: 1
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Arg1091Arg
num of homozygotes: 0
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
population: South Asian
reference allele: C
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP

X-63409895-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24063409895
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24063409895
    reference: chr 0
allele count: 1
allele frequency: 1.690159889125511e-5
allele num: 59166
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000384722
  ensembl transcript: ENST00000403336
  gene symbol: AMER1
  hgvsc: ENST00000403336.1:c.2357+915G>A
  variant of: http://identifiers.org/hgnc/26837
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000364003
  ensembl transcript: ENST00000374869
  gene symbol: AMER1
  hgvsc: ENST00000374869.3:c.2357+915G>A
  variant of: http://identifiers.org/hgnc/26837
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000329117
  ensembl transcript: ENST00000330258
  gene symbol: AMER1
  hgvsc: ENST00000330258.3:c.3272G>A
  hgvsp: ENSP00000329117.3:p.Arg1091Gln
  variant of: http://identifiers.org/hgnc/26837
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
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  bin: 2.25e1
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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hgvs: p.Arg1091Gln
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Latino
population: African
population: Other
population: East Asian
reference allele: C
site quality: InbreedingCoeff
site quality: ReadPosRankSum
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site quality: ClippingRankSum
site quality: BaseQRankSum
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site quality: MQ
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X-63409896-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24063409896
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24063409896
    reference: chr 0
allele count: 5
allele frequency: 8.438533720380746e-5
allele num: 59252
alternate allele: A
annotation: Annotation
  canonical: false
  clinical significance: not_provided
  consequence: intron_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000364003
  ensembl transcript: ENST00000374869
  gene symbol: AMER1
  hgvsc: ENST00000374869.3:c.2357+914C>T
  variant of: http://identifiers.org/hgnc/26837
annotation: Annotation
  canonical: false
  clinical significance: not_provided
  consequence: intron_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000384722
  ensembl transcript: ENST00000403336
  gene symbol: AMER1
  hgvsc: ENST00000403336.1:c.2357+914C>T
  variant of: http://identifiers.org/hgnc/26837
annotation: Annotation
  canonical: true
  clinical significance: not_provided
  consequence: missense_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000329117
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  gene symbol: AMER1
  hgvsc: ENST00000330258.3:c.3271C>T
  hgvsp: ENSP00000329117.3:p.Arg1091Trp
  variant of: http://identifiers.org/hgnc/26837
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
  all individuals: 85
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 504
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Arg1091Trp
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Latino
population: African
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: VQSLOD

X-63409955-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24063409955
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24063409955
    reference: chr 0
allele count: 0
allele frequency: 0.0e0
allele num: 57936
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000384722
  ensembl transcript: ENST00000403336
  gene symbol: AMER1
  hgvsc: ENST00000403336.1:c.2357+855C>G
  variant of: http://identifiers.org/hgnc/26837
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000364003
  ensembl transcript: ENST00000374869
  gene symbol: AMER1
  hgvsc: ENST00000374869.3:c.2357+855C>G
  variant of: http://identifiers.org/hgnc/26837
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000329117
  ensembl transcript: ENST00000330258
  gene symbol: AMER1
  hgvsc: ENST00000330258.3:c.3212C>G
  hgvsp: ENSP00000329117.3:p.Pro1071Arg
  variant of: http://identifiers.org/hgnc/26837
canonical: true
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 9693
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 5.25e1
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genotype quality: GenotypeQuality
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  bin: 2.5e0
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genotype quality: GenotypeQuality
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  bin: 9.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 2640
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 383
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Pro1071Arg
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Other
population: East Asian
reference allele: G
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: ClippingRankSum

X-63409959-TG-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24063409959
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24063409958
    reference: chr 0
allele count: 1
allele frequency: 1.723840717117738e-5
allele num: 58010
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000329117
  ensembl transcript: ENST00000330258
  gene symbol: AMER1
  hgvsc: ENST00000330258.3:c.3207delC
  hgvsp: ENSP00000329117.3:p.Ser1070AlafsTer60
  variant of: http://identifiers.org/hgnc/26837
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000384722
  ensembl transcript: ENST00000403336
  gene symbol: AMER1
  hgvsc: ENST00000403336.1:c.2357+850delC
  variant of: http://identifiers.org/hgnc/26837
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000364003
  ensembl transcript: ENST00000374869
  gene symbol: AMER1
  hgvsc: ENST00000374869.3:c.2357+850delC
  variant of: http://identifiers.org/hgnc/26837
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 328
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Ser1070AlafsTer60
num of homozygotes: 0
population: Other
population: Latino
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: TG
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum

X-63409976-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24063409976
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24063409976
    reference: chr 0
allele count: 1
allele frequency: 1.714119199849158e-5
allele num: 58339
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000364003
  ensembl transcript: ENST00000374869
  gene symbol: AMER1
  hgvsc: ENST00000374869.3:c.2357+834C>T
  variant of: http://identifiers.org/hgnc/26837
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000384722
  ensembl transcript: ENST00000403336
  gene symbol: AMER1
  hgvsc: ENST00000403336.1:c.2357+834C>T
  variant of: http://identifiers.org/hgnc/26837
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000329117
  ensembl transcript: ENST00000330258
  gene symbol: AMER1
  hgvsc: ENST00000330258.3:c.3191C>T
  hgvsp: ENSP00000329117.3:p.Ser1064Phe
  variant of: http://identifiers.org/hgnc/26837
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.75e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
hgvs: p.Ser1064Phe
num of homozygotes: 0
population: Other
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
reference allele: G
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: MQ

X-63409983-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24063409983
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24063409983
    reference: chr 0
allele count: 4
allele frequency: 6.78334011667345e-5
allele num: 58968
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000364003
  ensembl transcript: ENST00000374869
  gene symbol: AMER1
  hgvsc: ENST00000374869.3:c.2357+827T>A
  variant of: http://identifiers.org/hgnc/26837
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000384722
  ensembl transcript: ENST00000403336
  gene symbol: AMER1
  hgvsc: ENST00000403336.1:c.2357+827T>A
  variant of: http://identifiers.org/hgnc/26837
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000329117
  ensembl transcript: ENST00000330258
  gene symbol: AMER1
  hgvsc: ENST00000330258.3:c.3184T>A
  hgvsp: ENSP00000329117.3:p.Ser1062Thr
  variant of: http://identifiers.org/hgnc/26837
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3929
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 335
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  variant carriers: 3
hgvs: p.Ser1062Thr
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: African
population: Other
population: East Asian
population: South Asian
population: European (Non-Finnish)
reference allele: A
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: BaseQRankSum

X-63409986-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24063409986
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24063409986
    reference: chr 0
allele count: 0
allele frequency: 0.0e0
allele num: 59216
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000329117
  ensembl transcript: ENST00000330258
  gene symbol: AMER1
  hgvsc: ENST00000330258.3:c.3181T>A
  hgvsp: ENSP00000329117.3:p.Ser1061Thr
  variant of: http://identifiers.org/hgnc/26837
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000364003
  ensembl transcript: ENST00000374869
  gene symbol: AMER1
  hgvsc: ENST00000374869.3:c.2357+824T>A
  variant of: http://identifiers.org/hgnc/26837
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000384722
  ensembl transcript: ENST00000403336
  gene symbol: AMER1
  hgvsc: ENST00000403336.1:c.2357+824T>A
  variant of: http://identifiers.org/hgnc/26837
canonical: true
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 6.25e1
  variant carriers: 0
hgvs: p.Ser1061Thr
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
population: South Asian
population: East Asian
population: Other
reference allele: A
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: DP

X-63409994-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24063409994
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24063409994
    reference: chr 0
allele count: 1
allele frequency: 1.671569938486226e-5
allele num: 59824
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000384722
  ensembl transcript: ENST00000403336
  gene symbol: AMER1
  hgvsc: ENST00000403336.1:c.2357+816C>T
  variant of: http://identifiers.org/hgnc/26837
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000364003
  ensembl transcript: ENST00000374869
  gene symbol: AMER1
  hgvsc: ENST00000374869.3:c.2357+816C>T
  variant of: http://identifiers.org/hgnc/26837
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000329117
  ensembl transcript: ENST00000330258
  gene symbol: AMER1
  hgvsc: ENST00000330258.3:c.3173C>T
  hgvsp: ENSP00000329117.3:p.Pro1058Leu
  variant of: http://identifiers.org/hgnc/26837
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Pro1058Leu
num of homozygotes: 0
population: African
population: South Asian
population: Latino
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD

X-63410003-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24063410003
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24063410003
    reference: chr 0
allele count: 1
allele frequency: 1.647989452867502e-5
allele num: 60680
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000364003
  ensembl transcript: ENST00000374869
  gene symbol: AMER1
  hgvsc: ENST00000374869.3:c.2357+807T>A
  variant of: http://identifiers.org/hgnc/26837
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000329117
  ensembl transcript: ENST00000330258
  gene symbol: AMER1
  hgvsc: ENST00000330258.3:c.3164T>A
  hgvsp: ENSP00000329117.3:p.Val1055Asp
  variant of: http://identifiers.org/hgnc/26837
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000384722
  ensembl transcript: ENST00000403336
  gene symbol: AMER1
  hgvsc: ENST00000403336.1:c.2357+807T>A
  variant of: http://identifiers.org/hgnc/26837
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Val1055Asp
num of homozygotes: 0
population: East Asian
population: South Asian
population: Other
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
reference allele: A
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum

X-63410016-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24063410016
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24063410016
    reference: chr 0
allele count: 1
allele frequency: 1.614283177555007e-5
allele num: 61947
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000329117
  ensembl transcript: ENST00000330258
  gene symbol: AMER1
  hgvsc: ENST00000330258.3:c.3151G>T
  hgvsp: ENSP00000329117.3:p.Val1051Leu
  variant of: http://identifiers.org/hgnc/26837
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000364003
  ensembl transcript: ENST00000374869
  gene symbol: AMER1
  hgvsc: ENST00000374869.3:c.2357+794G>T
  variant of: http://identifiers.org/hgnc/26837
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000384722
  ensembl transcript: ENST00000403336
  gene symbol: AMER1
  hgvsc: ENST00000403336.1:c.2357+794G>T
  variant of: http://identifiers.org/hgnc/26837
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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hgvs: p.Val1051Leu
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
population: Other
population: South Asian
reference allele: C
site quality: DP
site quality: BaseQRankSum
site quality: MQ
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site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum

X-63410017-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24063410017
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24063410017
    reference: chr 0
allele count: 1
allele frequency: 1.607587814484366e-5
allele num: 62205
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000364003
  ensembl transcript: ENST00000374869
  gene symbol: AMER1
  hgvsc: ENST00000374869.3:c.2357+793T>A
  variant of: http://identifiers.org/hgnc/26837
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000329117
  ensembl transcript: ENST00000330258
  gene symbol: AMER1
  hgvsc: ENST00000330258.3:c.3150T>A
  hgvsp: ENSP00000329117.3:p.Asp1050Glu
  variant of: http://identifiers.org/hgnc/26837
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000384722
  ensembl transcript: ENST00000403336
  gene symbol: AMER1
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canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
hgvs: p.Asp1050Glu
num of homozygotes: 0
population: East Asian
population: Other
population: South Asian
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
reference allele: A
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
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X-63410022-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24063410022
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24063410022
    reference: chr 0
allele count: 1
allele frequency: 1.590938017054855e-5
allele num: 62856
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000384722
  ensembl transcript: ENST00000403336
  gene symbol: AMER1
  hgvsc: ENST00000403336.1:c.2357+788C>G
  variant of: http://identifiers.org/hgnc/26837
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000364003
  ensembl transcript: ENST00000374869
  gene symbol: AMER1
  hgvsc: ENST00000374869.3:c.2357+788C>G
  variant of: http://identifiers.org/hgnc/26837
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000329117
  ensembl transcript: ENST00000330258
  gene symbol: AMER1
  hgvsc: ENST00000330258.3:c.3145C>G
  hgvsp: ENSP00000329117.3:p.Arg1049Gly
  variant of: http://identifiers.org/hgnc/26837
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Arg1049Gly
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Latino
population: East Asian
population: African
population: Other
reference allele: G
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: DP

X-63410029-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24063410029
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24063410029
    reference: chr 0
allele count: 1
allele frequency: 1.558627784098879e-5
allele num: 64159
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000384722
  ensembl transcript: ENST00000403336
  gene symbol: AMER1
  hgvsc: ENST00000403336.1:c.2357+781C>T
  variant of: http://identifiers.org/hgnc/26837
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000329117
  ensembl transcript: ENST00000330258
  gene symbol: AMER1
  hgvsc: ENST00000330258.3:c.3138C>T
  hgvsp: ENST00000330258.3:c.3138C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26837
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000364003
  ensembl transcript: ENST00000374869
  gene symbol: AMER1
  hgvsc: ENST00000374869.3:c.2357+781C>T
  variant of: http://identifiers.org/hgnc/26837
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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hgvs: p.Ala1046Ala
num of homozygotes: 0
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
population: South Asian
population: Latino
population: European (Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: QD

X-63410033-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24063410033
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24063410033
    reference: chr 0
allele count: 1
allele frequency: 1.539764416044345e-5
allele num: 64945
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000364003
  ensembl transcript: ENST00000374869
  gene symbol: AMER1
  hgvsc: ENST00000374869.3:c.2357+777G>A
  variant of: http://identifiers.org/hgnc/26837
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000384722
  ensembl transcript: ENST00000403336
  gene symbol: AMER1
  hgvsc: ENST00000403336.1:c.2357+777G>A
  variant of: http://identifiers.org/hgnc/26837
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000329117
  ensembl transcript: ENST00000330258
  gene symbol: AMER1
  hgvsc: ENST00000330258.3:c.3134G>A
  hgvsp: ENSP00000329117.3:p.Arg1045Lys
  variant of: http://identifiers.org/hgnc/26837
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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hgvs: p.Arg1045Lys
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Other
population: East Asian
population: Latino
reference allele: C
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: BaseQRankSum

X-63410037-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24063410037
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24063410037
    reference: chr 0
allele count: 1
allele frequency: 1.523716649651831e-5
allele num: 65629
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000329117
  ensembl transcript: ENST00000330258
  gene symbol: AMER1
  hgvsc: ENST00000330258.3:c.3130A>G
  hgvsp: ENSP00000329117.3:p.Met1044Val
  variant of: http://identifiers.org/hgnc/26837
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000384722
  ensembl transcript: ENST00000403336
  gene symbol: AMER1
  hgvsc: ENST00000403336.1:c.2357+773A>G
  variant of: http://identifiers.org/hgnc/26837
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000364003
  ensembl transcript: ENST00000374869
  gene symbol: AMER1
  hgvsc: ENST00000374869.3:c.2357+773A>G
  variant of: http://identifiers.org/hgnc/26837
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Met1044Val
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: African
population: Other
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: T
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: FS

X-63410038-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24063410038
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24063410038
    reference: chr 0
allele count: 2
allele frequency: 3.046365685736916e-5
allele num: 65652
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000364003
  ensembl transcript: ENST00000374869
  gene symbol: AMER1
  hgvsc: ENST00000374869.3:c.2357+772C>T
  variant of: http://identifiers.org/hgnc/26837
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000384722
  ensembl transcript: ENST00000403336
  gene symbol: AMER1
  hgvsc: ENST00000403336.1:c.2357+772C>T
  variant of: http://identifiers.org/hgnc/26837
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000329117
  ensembl transcript: ENST00000330258
  gene symbol: AMER1
  hgvsc: ENST00000330258.3:c.3129C>T
  hgvsp: ENST00000330258.3:c.3129C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26837
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Ser1043Ser
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: South Asian
population: African
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
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X-63410039-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24063410039
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24063410039
    reference: chr 0
allele count: 1
allele frequency: 1.51851064475962e-5
allele num: 65854
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000329117
  ensembl transcript: ENST00000330258
  gene symbol: AMER1
  hgvsc: ENST00000330258.3:c.3128G>A
  hgvsp: ENSP00000329117.3:p.Ser1043Asn
  variant of: http://identifiers.org/hgnc/26837
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000384722
  ensembl transcript: ENST00000403336
  gene symbol: AMER1
  hgvsc: ENST00000403336.1:c.2357+771G>A
  variant of: http://identifiers.org/hgnc/26837
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000364003
  ensembl transcript: ENST00000374869
  gene symbol: AMER1
  hgvsc: ENST00000374869.3:c.2357+771G>A
  variant of: http://identifiers.org/hgnc/26837
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Ser1043Asn
num of homozygotes: 0
population: African
population: Latino
population: South Asian
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: QD

X-63410040-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24063410040
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24063410040
    reference: chr 0
allele count: 5
allele frequency: 7.558693253110402e-5
allele num: 66149
alternate allele: C
annotation: Annotation
  canonical: false
  clinical significance: not_provided
  consequence: intron_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000364003
  ensembl transcript: ENST00000374869
  gene symbol: AMER1
  hgvsc: ENST00000374869.3:c.2357+770A>G
  variant of: http://identifiers.org/hgnc/26837
annotation: Annotation
  canonical: true
  clinical significance: not_provided
  consequence: missense_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000329117
  ensembl transcript: ENST00000330258
  gene symbol: AMER1
  hgvsc: ENST00000330258.3:c.3127A>G
  hgvsp: ENSP00000329117.3:p.Ser1043Gly
  variant of: http://identifiers.org/hgnc/26837
annotation: Annotation
  canonical: false
  clinical significance: not_provided
  consequence: intron_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000384722
  ensembl transcript: ENST00000403336
  gene symbol: AMER1
  hgvsc: ENST00000403336.1:c.2357+770A>G
  variant of: http://identifiers.org/hgnc/26837
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
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  variant carriers: 2
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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hgvs: p.Ser1043Gly
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Other
population: Latino
population: South Asian
population: East Asian
reference allele: T
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum

X-63410058-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24063410058
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24063410058
    reference: chr 0
allele count: 1
allele frequency: 1.437835195329911e-5
allele num: 69549
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000364003
  ensembl transcript: ENST00000374869
  gene symbol: AMER1
  hgvsc: ENST00000374869.3:c.2357+752C>T
  variant of: http://identifiers.org/hgnc/26837
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000329117
  ensembl transcript: ENST00000330258
  gene symbol: AMER1
  hgvsc: ENST00000330258.3:c.3109C>T
  hgvsp: ENSP00000329117.3:p.Gln1037Ter
  variant of: http://identifiers.org/hgnc/26837
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000384722
  ensembl transcript: ENST00000403336
  gene symbol: AMER1
  hgvsc: ENST00000403336.1:c.2357+752C>T
  variant of: http://identifiers.org/hgnc/26837
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 25
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 7.25e1
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genotype quality: GenotypeQuality
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  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
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  bin: 5.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 2702
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 570
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Gln1037Ter
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: African
population: Latino
population: East Asian
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: QD

X-63410060-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24063410060
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24063410060
    reference: chr 0
allele count: 99
allele frequency: 1.502435767076928e-3
allele num: 65893
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000364003
  ensembl transcript: ENST00000374869
  gene symbol: AMER1
  hgvsc: ENST00000374869.3:c.2357+750T>C
  variant of: http://identifiers.org/hgnc/26837
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000384722
  ensembl transcript: ENST00000403336
  gene symbol: AMER1
  hgvsc: ENST00000403336.1:c.2357+750T>C
  variant of: http://identifiers.org/hgnc/26837
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000329117
  ensembl transcript: ENST00000330258
  gene symbol: AMER1
  hgvsc: ENST00000330258.3:c.3107T>C
  hgvsp: ENSP00000329117.3:p.Leu1036Pro
  variant of: http://identifiers.org/hgnc/26837
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.90to99.95
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 28
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  variant carriers: 2
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 4
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 5.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 113
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  variant carriers: 4
hgvs: p.Leu1036Pro
num of homozygotes: 0
population: Latino
population: Other
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: African
population: East Asian
reference allele: A
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: QD
site quality: MQ

X-63410063-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24063410063
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24063410063
    reference: chr 0
allele count: 3
allele frequency: 4.266211604095563e-5
allele num: 70320
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000329117
  ensembl transcript: ENST00000330258
  gene symbol: AMER1
  hgvsc: ENST00000330258.3:c.3104A>C
  hgvsp: ENSP00000329117.3:p.Asn1035Thr
  variant of: http://identifiers.org/hgnc/26837
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000364003
  ensembl transcript: ENST00000374869
  gene symbol: AMER1
  hgvsc: ENST00000374869.3:c.2357+747A>C
  variant of: http://identifiers.org/hgnc/26837
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000384722
  ensembl transcript: ENST00000403336
  gene symbol: AMER1
  hgvsc: ENST00000403336.1:c.2357+747A>C
  variant of: http://identifiers.org/hgnc/26837
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 853
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Asn1035Thr
num of homozygotes: 0
population: Other
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Latino
reference allele: T
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD

X-63410065-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24063410065
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24063410065
    reference: chr 0
allele count: 1
allele frequency: 1.404277429048883e-5
allele num: 71211
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000384722
  ensembl transcript: ENST00000403336
  gene symbol: AMER1
  hgvsc: ENST00000403336.1:c.2357+745T>C
  variant of: http://identifiers.org/hgnc/26837
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000364003
  ensembl transcript: ENST00000374869
  gene symbol: AMER1
  hgvsc: ENST00000374869.3:c.2357+745T>C
  variant of: http://identifiers.org/hgnc/26837
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000329117
  ensembl transcript: ENST00000330258
  gene symbol: AMER1
  hgvsc: ENST00000330258.3:c.3102T>C
  hgvsp: ENST00000330258.3:c.3102T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/26837
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 482
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13918
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 574
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  variant carriers: 1
hgvs: p.Tyr1034Tyr
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: Latino
population: African
population: South Asian
population: East Asian
reference allele: A
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: MQ

X-63410071-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24063410071
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24063410071
    reference: chr 0
allele count: 1
allele frequency: 1.373305684112227e-5
allele num: 72817
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000364003
  ensembl transcript: ENST00000374869
  gene symbol: AMER1
  hgvsc: ENST00000374869.3:c.2357+739T>C
  variant of: http://identifiers.org/hgnc/26837
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000384722
  ensembl transcript: ENST00000403336
  gene symbol: AMER1
  hgvsc: ENST00000403336.1:c.2357+739T>C
  variant of: http://identifiers.org/hgnc/26837
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000329117
  ensembl transcript: ENST00000330258
  gene symbol: AMER1
  hgvsc: ENST00000330258.3:c.3096T>C
  hgvsp: ENST00000330258.3:c.3096T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/26837
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 9264
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8022
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Pro1032Pro
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: European (Finnish)
population: African
population: Other
reference allele: A
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
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site quality: VQSLOD
site quality: QD
site quality: DP

X-63410075-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24063410075
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24063410075
    reference: chr 0
allele count: 5
allele frequency: 6.791724962305926e-5
allele num: 73619
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000364003
  ensembl transcript: ENST00000374869
  gene symbol: AMER1
  hgvsc: ENST00000374869.3:c.2357+735G>A
  variant of: http://identifiers.org/hgnc/26837
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000329117
  ensembl transcript: ENST00000330258
  gene symbol: AMER1
  hgvsc: ENST00000330258.3:c.3092G>A
  hgvsp: ENSP00000329117.3:p.Gly1031Asp
  variant of: http://identifiers.org/hgnc/26837
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000384722
  ensembl transcript: ENST00000403336
  gene symbol: AMER1
  hgvsc: ENST00000403336.1:c.2357+735G>A
  variant of: http://identifiers.org/hgnc/26837
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Gly1031Asp
num of homozygotes: 0
population: East Asian
population: Other
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD

X-63410086-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24063410086
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24063410086
    reference: chr 0
allele count: 1
allele frequency: 1.308831998324695e-5
allele num: 76404
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000329117
  ensembl transcript: ENST00000330258
  gene symbol: AMER1
  hgvsc: ENST00000330258.3:c.3081C>G
  hgvsp: ENSP00000329117.3:p.His1027Gln
  variant of: http://identifiers.org/hgnc/26837
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000384722
  ensembl transcript: ENST00000403336
  gene symbol: AMER1
  hgvsc: ENST00000403336.1:c.2357+724C>G
  variant of: http://identifiers.org/hgnc/26837
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000364003
  ensembl transcript: ENST00000374869
  gene symbol: AMER1
  hgvsc: ENST00000374869.3:c.2357+724C>G
  variant of: http://identifiers.org/hgnc/26837
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.His1027Gln
num of homozygotes: 0
population: South Asian
population: Latino
population: East Asian
population: European (Finnish)
population: Other
population: African
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
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X-63410094-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24063410094
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24063410094
    reference: chr 0
allele count: 8
allele frequency: 1.025351823844557e-4
allele num: 78022
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000384722
  ensembl transcript: ENST00000403336
  gene symbol: AMER1
  hgvsc: ENST00000403336.1:c.2357+716C>G
  variant of: http://identifiers.org/hgnc/26837
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000364003
  ensembl transcript: ENST00000374869
  gene symbol: AMER1
  hgvsc: ENST00000374869.3:c.2357+716C>G
  variant of: http://identifiers.org/hgnc/26837
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000329117
  ensembl transcript: ENST00000330258
  gene symbol: AMER1
  hgvsc: ENST00000330258.3:c.3073C>G
  hgvsp: ENSP00000329117.3:p.His1025Asp
  variant of: http://identifiers.org/hgnc/26837
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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hgvs: p.His1025Asp
num of homozygotes: 0
population: East Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: African
population: South Asian
population: European (Finnish)
reference allele: G
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
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site quality: MQRankSum
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X-63410096-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24063410096
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24063410096
    reference: chr 0
allele count: 1
allele frequency: 1.276079882600651e-5
allele num: 78365
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000384722
  ensembl transcript: ENST00000403336
  gene symbol: AMER1
  hgvsc: ENST00000403336.1:c.2357+714C>T
  variant of: http://identifiers.org/hgnc/26837
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000329117
  ensembl transcript: ENST00000330258
  gene symbol: AMER1
  hgvsc: ENST00000330258.3:c.3071C>T
  hgvsp: ENSP00000329117.3:p.Ser1024Leu
  variant of: http://identifiers.org/hgnc/26837
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000364003
  ensembl transcript: ENST00000374869
  gene symbol: AMER1
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  variant of: http://identifiers.org/hgnc/26837
canonical: true
consequence: missense
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1211
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4181
  bin: 6.75e1
  variant carriers: 1
hgvs: p.Ser1024Leu
num of homozygotes: 0
population: Other
population: South Asian
population: European (Finnish)
population: East Asian
population: Latino
population: European (Non-Finnish)
population: African
reference allele: G
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: FS
site quality: VQSLOD

X-63410102-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24063410102
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24063410102
    reference: chr 0
allele count: 1
allele frequency: 1.262993040908345e-5
allele num: 79177
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000364003
  ensembl transcript: ENST00000374869
  gene symbol: AMER1
  hgvsc: ENST00000374869.3:c.2357+708G>A
  variant of: http://identifiers.org/hgnc/26837
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000329117
  ensembl transcript: ENST00000330258
  gene symbol: AMER1
  hgvsc: ENST00000330258.3:c.3065G>A
  hgvsp: ENSP00000329117.3:p.Arg1022His
  variant of: http://identifiers.org/hgnc/26837
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000384722
  ensembl transcript: ENST00000403336
  gene symbol: AMER1
  hgvsc: ENST00000403336.1:c.2357+708G>A
  variant of: http://identifiers.org/hgnc/26837
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2384
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12180
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
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  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 1.25e1
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genotype quality: GenotypeQuality
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  bin: 4.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 5.25e1
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genotype quality: GenotypeQuality
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  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 5.75e1
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genotype quality: GenotypeQuality
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  bin: 3.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 607
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Arg1022His
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: African
population: Latino
population: South Asian
population: Other
reference allele: C
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: BaseQRankSum

X-63410110-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24063410110
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24063410110
    reference: chr 0
allele count: 8427
allele frequency: 1.040665868086e-1
allele num: 80977
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000329117
  ensembl transcript: ENST00000330258
  gene symbol: AMER1
  hgvsc: ENST00000330258.3:c.3057A>G
  hgvsp: ENST00000330258.3:c.3057A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/26837
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000384722
  ensembl transcript: ENST00000403336
  gene symbol: AMER1
  hgvsc: ENST00000403336.1:c.2357+700A>G
  variant of: http://identifiers.org/hgnc/26837
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000364003
  ensembl transcript: ENST00000374869
  gene symbol: AMER1
  hgvsc: ENST00000374869.3:c.2357+700A>G
  variant of: http://identifiers.org/hgnc/26837
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2244
  bin: 1.75e1
  variant carriers: 534
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 6.25e1
  variant carriers: 242
genotype depth: GenotypeDepth
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  variant carriers: 640
genotype depth: GenotypeDepth
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  variant carriers: 177
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 531
genotype depth: GenotypeDepth
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  bin: 3.75e1
  variant carriers: 568
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 636
genotype depth: GenotypeDepth
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  variant carriers: 146
genotype depth: GenotypeDepth
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  bin: 7.25e1
  variant carriers: 155
genotype depth: GenotypeDepth
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  bin: 9.75e1
  variant carriers: 500
genotype depth: GenotypeDepth
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  bin: 8.25e1
  variant carriers: 101
genotype depth: GenotypeDepth
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  bin: 8.75e1
  variant carriers: 73
genotype depth: GenotypeDepth
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  bin: 4.75e1
  variant carriers: 451
genotype quality: GenotypeQuality
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  bin: 1.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 7.5e0
  variant carriers: 55
genotype quality: GenotypeQuality
  all individuals: 551
  bin: 5.75e1
  variant carriers: 104
genotype quality: GenotypeQuality
  all individuals: 712
  bin: 4.75e1
  variant carriers: 192
genotype quality: GenotypeQuality
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  bin: 9.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 100
genotype quality: GenotypeQuality
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  bin: 9.25e1
  variant carriers: 147
genotype quality: GenotypeQuality
  all individuals: 194
  bin: 8.75e1
  variant carriers: 95
hgvs: p.Gln1019Gln
num of homozygotes: 2091
population: South Asian
population: East Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: African
population: Other
reference allele: T
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: DP

X-63410111-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24063410111
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24063410111
    reference: chr 0
allele count: 8
allele frequency: 9.855736654716586e-5
allele num: 81171
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000364003
  ensembl transcript: ENST00000374869
  gene symbol: AMER1
  hgvsc: ENST00000374869.3:c.2357+699A>G
  variant of: http://identifiers.org/hgnc/26837
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000329117
  ensembl transcript: ENST00000330258
  gene symbol: AMER1
  hgvsc: ENST00000330258.3:c.3056A>G
  hgvsp: ENSP00000329117.3:p.Gln1019Arg
  variant of: http://identifiers.org/hgnc/26837
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000384722
  ensembl transcript: ENST00000403336
  gene symbol: AMER1
  hgvsc: ENST00000403336.1:c.2357+699A>G
  variant of: http://identifiers.org/hgnc/26837
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 290
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
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  variant carriers: 1
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 3
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 484
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  variant carriers: 0
hgvs: p.Gln1019Arg
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: T
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD

X-63410123-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24063410123
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24063410123
    reference: chr 0
allele count: 1
allele frequency: 1.215923737263199e-5
allele num: 82242
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000384722
  ensembl transcript: ENST00000403336
  gene symbol: AMER1
  hgvsc: ENST00000403336.1:c.2357+687A>T
  variant of: http://identifiers.org/hgnc/26837
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000364003
  ensembl transcript: ENST00000374869
  gene symbol: AMER1
  hgvsc: ENST00000374869.3:c.2357+687A>T
  variant of: http://identifiers.org/hgnc/26837
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000329117
  ensembl transcript: ENST00000330258
  gene symbol: AMER1
  hgvsc: ENST00000330258.3:c.3044A>T
  hgvsp: ENSP00000329117.3:p.Glu1015Val
  variant of: http://identifiers.org/hgnc/26837
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14657
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2872
  bin: 3.25e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 682
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Glu1015Val
num of homozygotes: 0
population: East Asian
population: African
population: European (Non-Finnish)
population: South Asian
population: Other
population: European (Finnish)
population: Latino
reference allele: T
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD

X-63410129-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24063410129
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24063410129
    reference: chr 0
allele count: 3
allele frequency: 3.629544492166233e-5
allele num: 82655
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000364003
  ensembl transcript: ENST00000374869
  gene symbol: AMER1
  hgvsc: ENST00000374869.3:c.2357+681C>T
  variant of: http://identifiers.org/hgnc/26837
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000329117
  ensembl transcript: ENST00000330258
  gene symbol: AMER1
  hgvsc: ENST00000330258.3:c.3038C>T
  hgvsp: ENSP00000329117.3:p.Pro1013Leu
  variant of: http://identifiers.org/hgnc/26837
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000384722
  ensembl transcript: ENST00000403336
  gene symbol: AMER1
  hgvsc: ENST00000403336.1:c.2357+681C>T
  variant of: http://identifiers.org/hgnc/26837
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
hgvs: p.Pro1013Leu
num of homozygotes: 0
population: African
population: Other
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS

X-63410141-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24063410141
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24063410141
    reference: chr 0
allele count: 4
allele frequency: 4.802785615657081e-5
allele num: 83285
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000364003
  ensembl transcript: ENST00000374869
  gene symbol: AMER1
  hgvsc: ENST00000374869.3:c.2357+669A>G
  variant of: http://identifiers.org/hgnc/26837
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000384722
  ensembl transcript: ENST00000403336
  gene symbol: AMER1
  hgvsc: ENST00000403336.1:c.2357+669A>G
  variant of: http://identifiers.org/hgnc/26837
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000329117
  ensembl transcript: ENST00000330258
  gene symbol: AMER1
  hgvsc: ENST00000330258.3:c.3026A>G
  hgvsp: ENSP00000329117.3:p.Glu1009Gly
  variant of: http://identifiers.org/hgnc/26837
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
hgvs: p.Glu1009Gly
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Other
reference allele: T
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum

X-63410152-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24063410152
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24063410152
    reference: chr 0
allele count: 1
allele frequency: 1.197934760472945e-5
allele num: 83477
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000329117
  ensembl transcript: ENST00000330258
  gene symbol: AMER1
  hgvsc: ENST00000330258.3:c.3015A>G
  hgvsp: ENST00000330258.3:c.3015A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/26837
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000384722
  ensembl transcript: ENST00000403336
  gene symbol: AMER1
  hgvsc: ENST00000403336.1:c.2357+658A>G
  variant of: http://identifiers.org/hgnc/26837
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000364003
  ensembl transcript: ENST00000374869
  gene symbol: AMER1
  hgvsc: ENST00000374869.3:c.2357+658A>G
  variant of: http://identifiers.org/hgnc/26837
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Leu1005Leu
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: T
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: QD

X-63410157-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24063410157
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24063410157
    reference: chr 0
allele count: 1
allele frequency: 1.197633476250928e-5
allele num: 83498
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000364003
  ensembl transcript: ENST00000374869
  gene symbol: AMER1
  hgvsc: ENST00000374869.3:c.2357+653T>C
  variant of: http://identifiers.org/hgnc/26837
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000329117
  ensembl transcript: ENST00000330258
  gene symbol: AMER1
  hgvsc: ENST00000330258.3:c.3010T>C
  hgvsp: ENSP00000329117.3:p.Ser1004Pro
  variant of: http://identifiers.org/hgnc/26837
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000384722
  ensembl transcript: ENST00000403336
  gene symbol: AMER1
  hgvsc: ENST00000403336.1:c.2357+653T>C
  variant of: http://identifiers.org/hgnc/26837
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 66
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
hgvs: p.Ser1004Pro
num of homozygotes: 0
population: South Asian
population: Other
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: East Asian
reference allele: A
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: FS
site quality: BaseQRankSum

X-63410158-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24063410158
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24063410158
    reference: chr 0
allele count: 2
allele frequency: 2.394951442359506e-5
allele num: 83509
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000384722
  ensembl transcript: ENST00000403336
  gene symbol: AMER1
  hgvsc: ENST00000403336.1:c.2357+652A>G
  variant of: http://identifiers.org/hgnc/26837
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000364003
  ensembl transcript: ENST00000374869
  gene symbol: AMER1
  hgvsc: ENST00000374869.3:c.2357+652A>G
  variant of: http://identifiers.org/hgnc/26837
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000329117
  ensembl transcript: ENST00000330258
  gene symbol: AMER1
  hgvsc: ENST00000330258.3:c.3009A>G
  hgvsp: ENSP00000329117.3:p.Ile1003Met
  variant of: http://identifiers.org/hgnc/26837
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3488
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31386
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3807
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15520
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1873
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2897
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1182
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 638
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1081
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 498
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 144
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1137
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 387
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4730
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5415
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 172
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 448
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 141
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 739
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 309
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41996
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 898
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Ile1003Met
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: African
population: Latino
population: European (Finnish)
population: Other
reference allele: T
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD

X-63410159-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24063410159
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24063410159
    reference: chr 0
allele count: 1
allele frequency: 1.197633476250928e-5
allele num: 83498
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000384722
  ensembl transcript: ENST00000403336
  gene symbol: AMER1
  hgvsc: ENST00000403336.1:c.2357+651T>C
  variant of: http://identifiers.org/hgnc/26837
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000364003
  ensembl transcript: ENST00000374869
  gene symbol: AMER1
  hgvsc: ENST00000374869.3:c.2357+651T>C
  variant of: http://identifiers.org/hgnc/26837
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000184675
  ensembl protein: ENSP00000329117
  ensembl transcript: ENST00000330258
  gene symbol: AMER1
  hgvsc: ENST00000330258.3:c.3008T>C
  hgvsp: ENSP00000329117.3:p.Ile1003Thr
  variant of: http://identifiers.org/hgnc/26837
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2895
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1891
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31301
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 604
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3491
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3881
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15514
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Ile1003Thr
num of homozygotes: 0
reference allele: A

GenotypeQuality
all individuals: 16
bin: 4.75e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.506477854775535e-4
allele num: 6638
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 630
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9318
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8453
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.103093650760269e-5
allele num: 47549
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10098
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.42e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.98e0

MQ
type: SiteQuality
SIO_000300: 5.957e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.62e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.51e-1

QD
type: SiteQuality
SIO_000300: 1.392e1

MQRankSum
type: SiteQuality
SIO_000300: -1.33e-1

FS
type: SiteQuality
SIO_000300: 1.386e0

DP
type: SiteQuality
SIO_000300: 1.974116e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

GenotypeQuality
all individuals: 18
bin: 4.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 630
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8452
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10091
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4528
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6638
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.103403306549998e-5
allele num: 47542
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9317
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.102e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 1.29e0

VQSLOD
type: SiteQuality
SIO_000300: 1.52e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.1e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.084e0

DP
type: SiteQuality
SIO_000300: 1.973562e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

QD
type: SiteQuality
SIO_000300: 9.800000000000001e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.46e-1

GenotypeQuality
all individuals: 1471
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 5.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8452
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6637
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 7
allele frequency: 1.472320376914016e-4
allele num: 47544
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.073191672032625e-4
allele num: 9318
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 630
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 2
allele frequency: 4.415011037527594e-4
allele num: 4530
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10091
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.44e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.26e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.926e-1

DP
type: SiteQuality
SIO_000300: 1.97355e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.09e-1

MQ
type: SiteQuality
SIO_000300: 5.806e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.88e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.97e0

QD
type: SiteQuality
SIO_000300: 2.144e1

GenotypeQuality
all individuals: 48
bin: 3.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9318
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8453
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.506931886678722e-4
allele num: 6636
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47538
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 630
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10081
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.947e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.16e-2

DP
type: SiteQuality
SIO_000300: 1.97244e6

VQSLOD
type: SiteQuality
SIO_000300: 5.8e-2

QD
type: SiteQuality
SIO_000300: 9.529999999999999e0

MQRankSum
type: SiteQuality
SIO_000300: -5.01e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.65e-1

FS
type: SiteQuality
SIO_000300: 3.547e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.96e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.58e-1

GenotypeQuality
all individuals: 3282
bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47535
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 628
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10058
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.507386192342478e-4
allele num: 6634
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8452
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9316
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.975e1

VQSLOD
type: SiteQuality
SIO_000300: 2.67e0

QD
type: SiteQuality
SIO_000300: 3.062e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.08e-2

DP
type: SiteQuality
SIO_000300: 1.970467e6

FS
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
all individuals: 451
bin: 2.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 628
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6635
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9314
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47531
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10044
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.183151916706105e-4
allele num: 8452
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -4.221e-1

QD
type: SiteQuality
SIO_000300: 1.337e1

MQRankSum
type: SiteQuality
SIO_000300: -1.54e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 9.34e0

DP
type: SiteQuality
SIO_000300: 1.966989e6

BaseQRankSum
type: SiteQuality
SIO_000300: 4.36e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.82e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.4e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 5.46e-1

GenotypeQuality
all individuals: 2341
bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6635
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47525
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.183291918116199e-4
allele num: 8451
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 628
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9314
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10040
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 4.97e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.27e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.19e-2

MQ
type: SiteQuality
SIO_000300: 5.891e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.5e0

FS
type: SiteQuality
SIO_000300: 7.381e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.91e-1

VQSLOD
type: SiteQuality
SIO_000300: -7.768e-1

QD
type: SiteQuality
SIO_000300: 1.84e1

DP
type: SiteQuality
SIO_000300: 1.966988e6

GenotypeQuality
all individuals: 3274
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9314
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 6.312467122567069e-5
allele num: 47525
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8451
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 6635
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 628
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10040
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.966988e6

BaseQRankSum
type: SiteQuality
SIO_000300: 3.5e0

MQ
type: SiteQuality
SIO_000300: 5.891e1

FS
type: SiteQuality
SIO_000300: 7.381e0

QD
type: SiteQuality
SIO_000300: 1.84e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.19e-2

MQRankSum
type: SiteQuality
SIO_000300: 4.97e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.27e-1

VQSLOD
type: SiteQuality
SIO_000300: -7.768e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.91e-1

GenotypeQuality
all individuals: 2341
bin: 7.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 628
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47528
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 6635
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 9313
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10036
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.183431952662722e-4
allele num: 8450
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.97e0

QD
type: SiteQuality
SIO_000300: 1.645e1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.169999999999999e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.36e0

DP
type: SiteQuality
SIO_000300: 1.966042e6

FS
type: SiteQuality
SIO_000300: 2.644e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.31e-2

VQSLOD
type: SiteQuality
SIO_000300: -2.406e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.9e-1

GenotypeQuality
all individuals: 5777
bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8452
num of homozygotes: 0

South Asian
type: Population
allele count: 0
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Latino
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allele frequency: 0.0e0
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European (Non-Finnish)
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num of homozygotes: 0

European (Finnish)
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East Asian
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Other
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MQRankSum
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MQ
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ReadPosRankSum
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VQSLOD
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BaseQRankSum
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ClippingRankSum
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QD
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InbreedingCoeff
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DP
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FS
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GenotypeQuality
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African
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European (Non-Finnish)
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European (Finnish)
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South Asian
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East Asian
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Latino
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Other
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FS
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QD
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DP
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MQRankSum
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VQSLOD
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ClippingRankSum
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InbreedingCoeff
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MQ
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BaseQRankSum
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ReadPosRankSum
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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Other
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East Asian
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Latino
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South Asian
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African
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BaseQRankSum
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ClippingRankSum
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ReadPosRankSum
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FS
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DP
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VQSLOD
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MQRankSum
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InbreedingCoeff
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MQ
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QD
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GenotypeQuality
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African
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allele frequency: 0.0e0
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East Asian
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Other
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South Asian
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European (Finnish)
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Latino
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European (Non-Finnish)
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allele frequency: 2.106194317487731e-5
allele num: 47479
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InbreedingCoeff
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ReadPosRankSum
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BaseQRankSum
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MQRankSum
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MQ
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FS
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VQSLOD
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ClippingRankSum
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QD
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DP
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GenotypeQuality
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East Asian
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Other
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Latino
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South Asian
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European (Non-Finnish)
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African
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European (Finnish)
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ClippingRankSum
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MQ
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MQRankSum
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DP
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BaseQRankSum
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ReadPosRankSum
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FS
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QD
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VQSLOD
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InbreedingCoeff
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GenotypeQuality
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African
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
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East Asian
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Latino
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South Asian
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QD
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DP
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VQSLOD
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MQ
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FS
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InbreedingCoeff
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GenotypeQuality
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bin: 5.75e1
variant carriers: 0

South Asian
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European (Finnish)
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European (Non-Finnish)
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East Asian
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Other
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African
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Latino
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MQ
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QD
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InbreedingCoeff
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FS
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VQSLOD
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DP
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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Other
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Latino
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South Asian
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European (Finnish)
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African
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East Asian
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BaseQRankSum
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VQSLOD
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InbreedingCoeff
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MQRankSum
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QD
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FS
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MQ
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DP
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ReadPosRankSum
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ClippingRankSum
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GenotypeQuality
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variant carriers: 0

Other
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European (Non-Finnish)
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allele frequency: 0.0e0
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African
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East Asian
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South Asian
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Latino
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European (Finnish)
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BaseQRankSum
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MQRankSum
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ClippingRankSum
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ReadPosRankSum
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VQSLOD
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FS
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InbreedingCoeff
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DP
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MQ
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QD
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GenotypeQuality
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variant carriers: 0

African
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Other
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East Asian
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European (Non-Finnish)
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Latino
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European (Finnish)
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South Asian
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DP
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ClippingRankSum
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InbreedingCoeff
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MQ
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MQRankSum
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ReadPosRankSum
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BaseQRankSum
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FS
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QD
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VQSLOD
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GenotypeQuality
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South Asian
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European (Finnish)
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Other
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African
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European (Non-Finnish)
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Latino
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East Asian
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BaseQRankSum
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ClippingRankSum
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InbreedingCoeff
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MQ
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MQRankSum
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VQSLOD
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FS
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ReadPosRankSum
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DP
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QD
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GenotypeQuality
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South Asian
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Latino
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European (Finnish)
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African
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East Asian
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Other
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European (Non-Finnish)
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VQSLOD
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MQRankSum
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DP
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BaseQRankSum
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QD
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MQ
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ClippingRankSum
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ReadPosRankSum
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FS
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InbreedingCoeff
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GenotypeQuality
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East Asian
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European (Finnish)
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Latino
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South Asian
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African
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European (Non-Finnish)
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Other
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QD
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BaseQRankSum
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DP
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VQSLOD
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MQRankSum
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InbreedingCoeff
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FS
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MQ
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ClippingRankSum
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GenotypeQuality
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European (Finnish)
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European (Non-Finnish)
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South Asian
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Other
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African
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Latino
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East Asian
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DP
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FS
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BaseQRankSum
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QD
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VQSLOD
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ReadPosRankSum
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ClippingRankSum
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MQRankSum
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InbreedingCoeff
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MQ
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GenotypeQuality
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European (Finnish)
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allele frequency: 9.385265133740028e-4
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Latino
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East Asian
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Other
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allele frequency: 0.0e0
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African
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allele frequency: 1.995211492418196e-4
allele num: 5012
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European (Non-Finnish)
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allele count: 63
allele frequency: 2.096157045416736e-3
allele num: 30055
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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VQSLOD
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MQ
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ClippingRankSum
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ReadPosRankSum
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BaseQRankSum
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MQRankSum
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DP
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QD
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FS
type: SiteQuality
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InbreedingCoeff
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GenotypeQuality
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bin: 3.75e1
variant carriers: 0

European (Finnish)
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
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South Asian
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allele frequency: 1.497454327643007e-4
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African
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East Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
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QD
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BaseQRankSum
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VQSLOD
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ReadPosRankSum
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MQ
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DP
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MQRankSum
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FS
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InbreedingCoeff
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ClippingRankSum
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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South Asian
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allele frequency: 1.475143826523086e-4
allele num: 6779
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Other
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allele frequency: 0.0e0
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African
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East Asian
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Latino
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MQ
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ClippingRankSum
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DP
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MQRankSum
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InbreedingCoeff
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FS
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VQSLOD
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ReadPosRankSum
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QD
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BaseQRankSum
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GenotypeQuality
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South Asian
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East Asian
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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African
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Latino
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European (Non-Finnish)
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allele frequency: 6.401843730994526e-5
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Other
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DP
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ReadPosRankSum
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BaseQRankSum
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FS
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QD
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ClippingRankSum
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InbreedingCoeff
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MQ
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MQRankSum
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VQSLOD
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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African
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East Asian
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Latino
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South Asian
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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Other
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FS
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DP
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QD
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VQSLOD
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BaseQRankSum
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ClippingRankSum
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InbreedingCoeff
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MQRankSum
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ReadPosRankSum
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MQ
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GenotypeQuality
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variant carriers: 0

East Asian
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allele frequency: 0.0e0
allele num: 4871
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 2164
num of homozygotes: 0

South Asian
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Other
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allele count: 0
allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
allele num: 6923
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 31231
num of homozygotes: 0

African
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MQRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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ClippingRankSum
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FS
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MQ
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VQSLOD
type: SiteQuality
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InbreedingCoeff
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QD
type: SiteQuality
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ReadPosRankSum
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DP
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

Latino
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allele frequency: 0.0e0
allele num: 6911
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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Other
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allele count: 0
allele frequency: 0.0e0
allele num: 386
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European (Non-Finnish)
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allele frequency: 3.211097553143665e-5
allele num: 31142
num of homozygotes: 0

African
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South Asian
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DP
type: SiteQuality
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FS
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MQ
type: SiteQuality
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VQSLOD
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InbreedingCoeff
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QD
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

Other
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allele frequency: 0.0e0
allele num: 389
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European (Finnish)
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 3.233943470668133e-5
allele num: 30922
num of homozygotes: 0

African
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South Asian
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ReadPosRankSum
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MQRankSum
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InbreedingCoeff
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BaseQRankSum
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ClippingRankSum
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DP
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FS
type: SiteQuality
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MQ
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VQSLOD
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QD
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GenotypeQuality
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variant carriers: 0

East Asian
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 9.701830412004398e-5
allele num: 30922
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Other
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Latino
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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European (Finnish)
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MQRankSum
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ReadPosRankSum
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MQ
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QD
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VQSLOD
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DP
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FS
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InbreedingCoeff
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ClippingRankSum
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BaseQRankSum
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GenotypeQuality
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variant carriers: 1

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 5.569425772997887e-3
allele num: 5207
num of homozygotes: 0

East Asian
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Latino
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allele frequency: 2.933411557641537e-4
allele num: 6818
num of homozygotes: 0

South Asian
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allele frequency: 7.606876616461281e-4
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European (Non-Finnish)
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
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MQRankSum
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QD
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BaseQRankSum
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InbreedingCoeff
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FS
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VQSLOD
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MQ
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ClippingRankSum
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ReadPosRankSum
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DP
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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African
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European (Non-Finnish)
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Latino
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South Asian
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Other
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InbreedingCoeff
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FS
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DP
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QD
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VQSLOD
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MQ
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GenotypeQuality
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variant carriers: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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African
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Latino
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East Asian
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Other
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European (Non-Finnish)
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num of homozygotes: 0

VQSLOD
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BaseQRankSum
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ReadPosRankSum
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InbreedingCoeff
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FS
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MQ
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ClippingRankSum
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QD
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MQRankSum
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DP
type: SiteQuality
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GenotypeQuality
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bin: 2.75e1
variant carriers: 0

Other
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South Asian
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Latino
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European (Non-Finnish)
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European (Finnish)
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African
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East Asian
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DP
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MQ
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ReadPosRankSum
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InbreedingCoeff
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QD
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VQSLOD
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BaseQRankSum
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MQRankSum
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FS
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ClippingRankSum
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GenotypeQuality
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European (Finnish)
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Other
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Latino
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European (Non-Finnish)
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num of homozygotes: 0

East Asian
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African
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South Asian
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MQ
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InbreedingCoeff
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QD
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FS
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VQSLOD
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DP
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GenotypeQuality
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European (Finnish)
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num of homozygotes: 0

African
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East Asian
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Latino
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Other
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European (Non-Finnish)
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allele frequency: 3.149705502535513e-5
allele num: 31749
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South Asian
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allele frequency: 0.0e0
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MQ
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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FS
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InbreedingCoeff
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VQSLOD
type: SiteQuality
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QD
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ReadPosRankSum
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MQRankSum
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BaseQRankSum
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DP
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 3.105204322444417e-5
allele num: 32204
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DP
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QD
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FS
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InbreedingCoeff
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MQ
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VQSLOD
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GenotypeQuality
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variant carriers: 5

Other
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allele frequency: 9.75609756097561e-3
allele num: 410
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European (Finnish)
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allele frequency: 4.58295142071494e-3
allele num: 2182
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European (Non-Finnish)
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allele frequency: 1.252520315268528e-3
allele num: 32734
num of homozygotes: 0

African
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East Asian
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allele frequency: 0.0e0
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Latino
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allele frequency: 2.91587694999271e-4
allele num: 6859
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South Asian
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allele frequency: 3.166059838530948e-4
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num of homozygotes: 0

BaseQRankSum
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InbreedingCoeff
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QD
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ClippingRankSum
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FS
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VQSLOD
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MQ
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MQRankSum
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ReadPosRankSum
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DP
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 32788
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South Asian
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allele frequency: 1.587553579933323e-4
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European (Finnish)
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allele frequency: 0.0e0
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Latino
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African
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Other
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East Asian
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InbreedingCoeff
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ReadPosRankSum
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MQRankSum
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FS
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ClippingRankSum
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BaseQRankSum
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QD
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MQ
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DP
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VQSLOD
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele frequency: 0.0e0
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South Asian
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allele frequency: 3.173092178327781e-4
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East Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 1
allele frequency: 3.040992579978105e-5
allele num: 32884
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Latino
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allele frequency: 0.0e0
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African
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allele frequency: 3.514320857494289e-4
allele num: 5691
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Other
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allele count: 0
allele frequency: 0.0e0
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BaseQRankSum
type: SiteQuality
SIO_000300: 1.24e-1

ClippingRankSum
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FS
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MQ
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DP
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ReadPosRankSum
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InbreedingCoeff
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MQRankSum
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QD
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VQSLOD
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

African
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allele frequency: 0.0e0
allele num: 5758
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Latino
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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South Asian
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Other
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allele frequency: 0.0e0
allele num: 388
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East Asian
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MQ
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ReadPosRankSum
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VQSLOD
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InbreedingCoeff
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BaseQRankSum
type: SiteQuality
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FS
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MQRankSum
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QD
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DP
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ClippingRankSum
type: SiteQuality
SIO_000300: 8.49e-1

GenotypeQuality
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variant carriers: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 383
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 6630
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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African
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allele frequency: 1.729804532087874e-4
allele num: 5781
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South Asian
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allele frequency: 0.0e0
allele num: 5963
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VQSLOD
type: SiteQuality
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FS
type: SiteQuality
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InbreedingCoeff
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QD
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MQ
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ReadPosRankSum
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BaseQRankSum
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MQRankSum
type: SiteQuality
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DP
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ClippingRankSum
type: SiteQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

Other
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allele frequency: 0.0e0
allele num: 402
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African
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East Asian
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allele frequency: 0.0e0
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South Asian
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 3.073801985676083e-5
allele num: 32533
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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DP
type: SiteQuality
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InbreedingCoeff
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FS
type: SiteQuality
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VQSLOD
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QD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

European (Finnish)
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allele count: 4
allele frequency: 1.777777777777778e-3
allele num: 2250
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Latino
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 32927
num of homozygotes: 0

ReadPosRankSum
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InbreedingCoeff
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ClippingRankSum
type: SiteQuality
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FS
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VQSLOD
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QD
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MQRankSum
type: SiteQuality
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DP
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MQ
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BaseQRankSum
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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Latino
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African
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South Asian
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East Asian
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Other
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InbreedingCoeff
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MQ
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QD
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FS
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VQSLOD
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DP
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GenotypeQuality
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variant carriers: 0

African
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South Asian
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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East Asian
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European (Non-Finnish)
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allele frequency: 2.993295019157088e-5
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Other
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ClippingRankSum
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MQ
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FS
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BaseQRankSum
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MQRankSum
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ReadPosRankSum
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DP
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InbreedingCoeff
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QD
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VQSLOD
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GenotypeQuality
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variant carriers: 0

East Asian
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South Asian
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Other
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African
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European (Finnish)
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Latino
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European (Non-Finnish)
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allele frequency: 2.948026296394564e-5
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QD
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InbreedingCoeff
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DP
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MQ
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FS
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ClippingRankSum
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VQSLOD
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BaseQRankSum
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MQRankSum
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ReadPosRankSum
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GenotypeQuality
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bin: 1.25e1
variant carriers: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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African
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East Asian
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Latino
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Other
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South Asian
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DP
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BaseQRankSum
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MQ
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MQRankSum
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ClippingRankSum
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FS
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VQSLOD
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InbreedingCoeff
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QD
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ReadPosRankSum
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GenotypeQuality
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East Asian
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Other
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South Asian
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Latino
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European (Finnish)
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African
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European (Non-Finnish)
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InbreedingCoeff
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FS
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MQRankSum
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MQ
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DP
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ReadPosRankSum
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QD
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VQSLOD
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BaseQRankSum
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ClippingRankSum
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GenotypeQuality
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European (Finnish)
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South Asian
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Latino
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East Asian
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African
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allele frequency: 0.0e0
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Other
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VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
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FS
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QD
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InbreedingCoeff
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DP
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

East Asian
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allele frequency: 0.0e0
allele num: 5159
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African
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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South Asian
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allele frequency: 1.565680288085173e-4
allele num: 6387
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 7261
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European (Finnish)
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allele frequency: 0.0e0
allele num: 2669
num of homozygotes: 0

BaseQRankSum
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FS
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InbreedingCoeff
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MQRankSum
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VQSLOD
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ClippingRankSum
type: SiteQuality
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MQ
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DP
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ReadPosRankSum
type: SiteQuality
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QD
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GenotypeQuality
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variant carriers: 0

African
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allele frequency: 0.0e0
allele num: 6388
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 2.750426316078992e-5
allele num: 36358
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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South Asian
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Other
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allele frequency: 0.0e0
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East Asian
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Latino
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allele frequency: 0.0e0
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QD
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MQRankSum
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InbreedingCoeff
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MQ
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ClippingRankSum
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ReadPosRankSum
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VQSLOD
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DP
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FS
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BaseQRankSum
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 2788
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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Other
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East Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 2.717908297774033e-5
allele num: 36793
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South Asian
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MQ
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ReadPosRankSum
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QD
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BaseQRankSum
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MQRankSum
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InbreedingCoeff
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ClippingRankSum
type: SiteQuality
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VQSLOD
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DP
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FS
type: SiteQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

Latino
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allele frequency: 0.0e0
allele num: 7443
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 2788
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 2
allele frequency: 5.435964340073929e-5
allele num: 36792
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Other
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allele frequency: 0.0e0
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DP
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MQRankSum
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VQSLOD
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QD
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InbreedingCoeff
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FS
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BaseQRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
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ReadPosRankSum
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GenotypeQuality
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variant carriers: 0

African
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allele frequency: 0.0e0
allele num: 6444
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Latino
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allele frequency: 0.0e0
allele num: 7470
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South Asian
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allele frequency: 1.553518719900575e-4
allele num: 6437
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 36932
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Other
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allele frequency: 0.0e0
allele num: 453
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FS
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SIO_000300: 0.0e0

MQ
type: SiteQuality
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InbreedingCoeff
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DP
type: SiteQuality
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VQSLOD
type: SiteQuality
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QD
type: SiteQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 1

European (Non-Finnish)
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allele count: 4
allele frequency: 1.077847538465684e-4
allele num: 37111
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 6463
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 2812
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 457
num of homozygotes: 0

Latino
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allele count: 1
allele frequency: 1.335648457326032e-4
allele num: 7487
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
allele num: 5334
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VQSLOD
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BaseQRankSum
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QD
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DP
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ReadPosRankSum
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FS
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MQRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: 2.3e-1

GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 3070
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 2.559115569659126e-5
allele num: 39076
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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African
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allele count: 0
allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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East Asian
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allele count: 0
allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
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InbreedingCoeff
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MQRankSum
type: SiteQuality
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VQSLOD
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MQ
type: SiteQuality
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ClippingRankSum
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ReadPosRankSum
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BaseQRankSum
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FS
type: SiteQuality
SIO_000300: 9.342000000000001e0

DP
type: SiteQuality
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QD
type: SiteQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 3

Latino
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allele count: 1
allele frequency: 1.286008230452675e-4
allele num: 7776
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 408
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European (Non-Finnish)
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allele frequency: 1.706947003359705e-3
allele num: 36908
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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European (Finnish)
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allele count: 18
allele frequency: 7.214428857715431e-3
allele num: 2495
num of homozygotes: 0

African
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allele count: 16
allele frequency: 2.620802620802621e-3
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East Asian
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allele frequency: 1.798237727027513e-4
allele num: 5561
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MQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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InbreedingCoeff
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BaseQRankSum
type: SiteQuality
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DP
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 1.11851e2

QD
type: SiteQuality
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MQ
type: SiteQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

Other
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allele frequency: 0.0e0
allele num: 475
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European (Finnish)
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allele frequency: 0.0e0
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African
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European (Non-Finnish)
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allele frequency: 7.585335018963337e-5
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South Asian
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East Asian
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Latino
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MQRankSum
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FS
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MQ
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BaseQRankSum
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VQSLOD
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ClippingRankSum
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DP
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ReadPosRankSum
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InbreedingCoeff
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QD
type: SiteQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 40027
num of homozygotes: 0

Other
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European (Finnish)
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allele frequency: 0.0e0
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Latino
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African
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South Asian
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East Asian
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InbreedingCoeff
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DP
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MQRankSum
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ClippingRankSum
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VQSLOD
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FS
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BaseQRankSum
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ReadPosRankSum
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QD
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MQ
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GenotypeQuality
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variant carriers: 0

Latino
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num of homozygotes: 0

European (Non-Finnish)
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East Asian
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South Asian
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European (Finnish)
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African
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Other
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InbreedingCoeff
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BaseQRankSum
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MQ
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ClippingRankSum
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MQRankSum
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FS
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ReadPosRankSum
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VQSLOD
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QD
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DP
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GenotypeQuality
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variant carriers: 4

East Asian
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Other
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European (Finnish)
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African
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Latino
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European (Non-Finnish)
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allele frequency: 1.206854936036688e-4
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South Asian
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DP
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ClippingRankSum
type: SiteQuality
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MQRankSum
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BaseQRankSum
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FS
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ReadPosRankSum
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MQ
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VQSLOD
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InbreedingCoeff
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QD
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GenotypeQuality
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South Asian
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Latino
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East Asian
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European (Finnish)
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Other
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African
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European (Non-Finnish)
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InbreedingCoeff
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ClippingRankSum
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ReadPosRankSum
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FS
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VQSLOD
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QD
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MQRankSum
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BaseQRankSum
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MQ
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DP
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GenotypeQuality
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variant carriers: 0

East Asian
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Other
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European (Non-Finnish)
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allele frequency: 1.595987232102143e-4
allele num: 43860
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Latino
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African
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allele frequency: 1.36986301369863e-4
allele num: 7300
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South Asian
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allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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MQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 1.94e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 9.02e-1

FS
type: SiteQuality
SIO_000300: 3.408e0

DP
type: SiteQuality
SIO_000300: 1.237581e6

QD
type: SiteQuality
SIO_000300: 1.539e1

GenotypeQuality
all individuals: 173
bin: 8.75e1
variant carriers: 0

Other
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allele frequency: 0.0e0
allele num: 542
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7676
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 3760
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East Asian
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allele count: 0
allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
allele num: 8762
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European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.269941435510964e-5
allele num: 44054
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 7321
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MQRankSum
type: SiteQuality
SIO_000300: 1.2e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.44e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.88e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.9e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -2.546e0

DP
type: SiteQuality
SIO_000300: 1.246327e6

QD
type: SiteQuality
SIO_000300: 2.788e1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -2.509e0

GenotypeQuality
all individuals: 514
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3822
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 44532
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6311
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African
type: Population
allele count: 1
allele frequency: 1.358511071865236e-4
allele num: 7361
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8835
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 550
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MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.179999999999999e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.7e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 8.3e-1

FS
type: SiteQuality
SIO_000300: 3.687e0

MQRankSum
type: SiteQuality
SIO_000300: 1.01e0

VQSLOD
type: SiteQuality
SIO_000300: 5.679999999999999e-1

QD
type: SiteQuality
SIO_000300: 1.514e1

DP
type: SiteQuality
SIO_000300: 1.267122e6

BaseQRankSum
type: SiteQuality
SIO_000300: -7.27e-1

GenotypeQuality
all individuals: 35660
bin: 6.25e1
variant carriers: 204

South Asian
type: Population
allele count: 343
allele frequency: 4.20343137254902e-2
allele num: 8160
num of homozygotes: 2

East Asian
type: Population
allele count: 95
allele frequency: 1.486232790988736e-2
allele num: 6392
num of homozygotes: 1

European (Finnish)
type: Population
allele count: 68
allele frequency: 1.726764855256475e-2
allele num: 3938
num of homozygotes: 1

Latino
type: Population
allele count: 756
allele frequency: 8.481041059008301e-2
allele num: 8914
num of homozygotes: 23

European (Non-Finnish)
type: Population
allele count: 693
allele frequency: 1.532304426657233e-2
allele num: 45226
num of homozygotes: 5

African
type: Population
allele count: 6442
allele frequency: 8.273824813768302e-1
allele num: 7786
num of homozygotes: 2058

Other
type: Population
allele count: 30
allele frequency: 5.3475935828877e-2
allele num: 561
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BaseQRankSum
type: SiteQuality
SIO_000300: 2.36e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.617e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.092e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.29e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 2.749e1

MQRankSum
type: SiteQuality
SIO_000300: 1.37e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.41e-1

MQ
type: SiteQuality
SIO_000300: 5.974e1

DP
type: SiteQuality
SIO_000300: 1.444698e6

GenotypeQuality
all individuals: 4578
bin: 6.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3952
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7751
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.560305819940708e-4
allele num: 6409
num of homozygotes: 0

Latino
type: Population
allele count: 7
allele frequency: 7.808142777467931e-4
allele num: 8965
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 45350
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 561
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South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8183
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ClippingRankSum
type: SiteQuality
SIO_000300: -8.159999999999999e-1

QD
type: SiteQuality
SIO_000300: 1.478e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.83e-2

FS
type: SiteQuality
SIO_000300: 5.27e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.71e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -2.7e-2

DP
type: SiteQuality
SIO_000300: 1.319591e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.88e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.18e0

GenotypeQuality
all individuals: 151
bin: 8.75e1
variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 6451
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.290655653071761e-4
allele num: 7748
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 45893
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8481
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 572
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4060
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 9037
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ReadPosRankSum
type: SiteQuality
SIO_000300: 4.2e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 1.48e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.0e-4

DP
type: SiteQuality
SIO_000300: 1.348081e6

QD
type: SiteQuality
SIO_000300: 4.79e0

MQRankSum
type: SiteQuality
SIO_000300: 2.37e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.29e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.01e-1

VQSLOD
type: SiteQuality
SIO_000300: -8.459e-1

GenotypeQuality
all individuals: 485
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7743
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 576
num of homozygotes: 0

European (Non-Finnish)
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allele count: 3
allele frequency: 6.511405812514923e-5
allele num: 46073
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 6468
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4092
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 9056
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8647
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MQRankSum
type: SiteQuality
SIO_000300: -3.25e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.4e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.999999999999999e-3

BaseQRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.97e1

QD
type: SiteQuality
SIO_000300: 1.788e1

DP
type: SiteQuality
SIO_000300: 1.359163e6

ClippingRankSum
type: SiteQuality
SIO_000300: -3.87e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.056e-1

FS
type: SiteQuality
SIO_000300: 1.959e0

GenotypeQuality
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bin: 8.75e1
variant carriers: 1

African
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allele count: 0
allele frequency: 0.0e0
allele num: 7738
num of homozygotes: 0

Latino
type: Population
allele count: 4
allele frequency: 4.398504508467121e-4
allele num: 9094
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6485
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 46315
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4136
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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Other
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allele count: 0
allele frequency: 0.0e0
allele num: 581
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QD
type: SiteQuality
SIO_000300: 2.38e1

VQSLOD
type: SiteQuality
SIO_000300: -1.442e0

MQRankSum
type: SiteQuality
SIO_000300: -1.272e0

DP
type: SiteQuality
SIO_000300: 1.371442e6

ClippingRankSum
type: SiteQuality
SIO_000300: 6.96e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.32e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 2.02e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 2.99e0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4151
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 6485
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 7724
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9096
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 2.156473734149918e-5
allele num: 46372
num of homozygotes: 0

Other
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allele count: 0
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South Asian
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allele count: 0
allele frequency: 0.0e0
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VQSLOD
type: SiteQuality
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MQRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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MQ
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: -8.51e-1

InbreedingCoeff
type: SiteQuality
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FS
type: SiteQuality
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DP
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: 2.76e-1

QD
type: SiteQuality
SIO_000300: 1.845e1

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

South Asian
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allele frequency: 0.0e0
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 580
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 7720
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 9102
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 46370
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East Asian
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allele frequency: 1.543448062972681e-4
allele num: 6479
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ReadPosRankSum
type: SiteQuality
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DP
type: SiteQuality
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MQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
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QD
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FS
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 6479
num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 4.312854462726155e-5
allele num: 46373
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South Asian
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African
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 9100
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4159
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 580
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.945e1

VQSLOD
type: SiteQuality
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DP
type: SiteQuality
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MQRankSum
type: SiteQuality
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FS
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 5.77e-2

ReadPosRankSum
type: SiteQuality
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QD
type: SiteQuality
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