17-7106987-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7106987
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7106987
    reference: chr 17
allele count: 47
allele frequency: 3.915361546151283e-4
allele num: 120040
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000382425
  ensembl transcript: ENST00000399506
  gene symbol: DLG4
  hgvsc: ENST00000399506.2:c.335+24G>A
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000307471
  ensembl transcript: ENST00000302955
  gene symbol: DLG4
  hgvsc: ENST00000302955.6:c.326+24G>A
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000388122
  ensembl transcript: ENST00000447163
  gene symbol: DLG4
  hgvsc: ENST00000447163.1:c.425+24G>A
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000465789
  ensembl transcript: ENST00000493294
  gene symbol: DLG4
  hgvsc: ENST00000493294.1:c.155+24G>A
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000382428
  ensembl transcript: ENST00000399510
  gene symbol: DLG4
  hgvsc: ENST00000399510.2:c.464+24G>A
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000460625
  ensembl transcript: ENST00000485100
  gene symbol: DLG4
  hgvsc: ENST00000485100.1:c.326+24G>A
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000407918
  ensembl transcript: ENST00000451807
  gene symbol: DLG4
  hgvsc: ENST00000451807.2:c.434+24G>A
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000465720
  ensembl transcript: ENST00000486626
  gene symbol: DLG4
  hgvsc: ENST00000486626.3:c.155+24G>A
  variant of: http://identifiers.org/hgnc/2903
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28444
  bin: 2.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 20710
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 614
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 1206
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 717
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7018
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 525
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 6.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 7896
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 292
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 230
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: South Asian
population: African
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: InbreedingCoeff

17-7106993-CCT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7106993
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7106991
    reference: chr 17
allele count: 1
allele frequency: 8.323899580475461e-6
allele num: 120136
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000465789
  ensembl transcript: ENST00000493294
  gene symbol: DLG4
  hgvsc: ENST00000493294.1:c.155+16_155+17delAG
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000388122
  ensembl transcript: ENST00000447163
  gene symbol: DLG4
  hgvsc: ENST00000447163.1:c.425+16_425+17delAG
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000460625
  ensembl transcript: ENST00000485100
  gene symbol: DLG4
  hgvsc: ENST00000485100.1:c.326+16_326+17delAG
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000307471
  ensembl transcript: ENST00000302955
  gene symbol: DLG4
  hgvsc: ENST00000302955.6:c.326+16_326+17delAG
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000465720
  ensembl transcript: ENST00000486626
  gene symbol: DLG4
  hgvsc: ENST00000486626.3:c.155+16_155+17delAG
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000382425
  ensembl transcript: ENST00000399506
  gene symbol: DLG4
  hgvsc: ENST00000399506.2:c.335+16_335+17delAG
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000407918
  ensembl transcript: ENST00000451807
  gene symbol: DLG4
  hgvsc: ENST00000451807.2:c.434+16_434+17delAG
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000382428
  ensembl transcript: ENST00000399510
  gene symbol: DLG4
  hgvsc: ENST00000399510.2:c.464+16_464+17delAG
  variant of: http://identifiers.org/hgnc/2903
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7056
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20866
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 525
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28591
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1212
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 228
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 184
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 290
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 221
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 715
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: South Asian
population: East Asian
reference allele: CCT
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD

17-7106995-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7106995
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7106995
    reference: chr 17
allele count: 2
allele frequency: 1.66441970007157e-5
allele num: 120162
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000382428
  ensembl transcript: ENST00000399510
  gene symbol: DLG4
  hgvsc: ENST00000399510.2:c.464+16A>G
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000407918
  ensembl transcript: ENST00000451807
  gene symbol: DLG4
  hgvsc: ENST00000451807.2:c.434+16A>G
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000307471
  ensembl transcript: ENST00000302955
  gene symbol: DLG4
  hgvsc: ENST00000302955.6:c.326+16A>G
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000465720
  ensembl transcript: ENST00000486626
  gene symbol: DLG4
  hgvsc: ENST00000486626.3:c.155+16A>G
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000388122
  ensembl transcript: ENST00000447163
  gene symbol: DLG4
  hgvsc: ENST00000447163.1:c.425+16A>G
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000460625
  ensembl transcript: ENST00000485100
  gene symbol: DLG4
  hgvsc: ENST00000485100.1:c.326+16A>G
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000382425
  ensembl transcript: ENST00000399506
  gene symbol: DLG4
  hgvsc: ENST00000399506.2:c.335+16A>G
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000465789
  ensembl transcript: ENST00000493294
  gene symbol: DLG4
  hgvsc: ENST00000493294.1:c.155+16A>G
  variant of: http://identifiers.org/hgnc/2903
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28622
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 557
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20928
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7071
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1213
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 295
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 204
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 561
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 715
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1532
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
population: Other
population: South Asian
population: European (Finnish)
reference allele: T
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: QD

17-7107003-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7107003
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7107003
    reference: chr 17
allele count: 1
allele frequency: 8.315731701232391e-6
allele num: 120254
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000465789
  ensembl transcript: ENST00000493294
  gene symbol: DLG4
  hgvsc: ENST00000493294.1:c.155+8G>C
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000382428
  ensembl transcript: ENST00000399510
  gene symbol: DLG4
  hgvsc: ENST00000399510.2:c.464+8G>C
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000307471
  ensembl transcript: ENST00000302955
  gene symbol: DLG4
  hgvsc: ENST00000302955.6:c.326+8G>C
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000407918
  ensembl transcript: ENST00000451807
  gene symbol: DLG4
  hgvsc: ENST00000451807.2:c.434+8G>C
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000388122
  ensembl transcript: ENST00000447163
  gene symbol: DLG4
  hgvsc: ENST00000447163.1:c.425+8G>C
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000382425
  ensembl transcript: ENST00000399506
  gene symbol: DLG4
  hgvsc: ENST00000399506.2:c.335+8G>C
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000465720
  ensembl transcript: ENST00000486626
  gene symbol: DLG4
  hgvsc: ENST00000486626.3:c.155+8G>C
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000460625
  ensembl transcript: ENST00000485100
  gene symbol: DLG4
  hgvsc: ENST00000485100.1:c.326+8G>C
  variant of: http://identifiers.org/hgnc/2903
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20970
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28817
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1219
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7123
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1931
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 720
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 159
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 4.75e1
  variant carriers: 0
hgvs: c.464+8G>C
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: QD
site quality: BaseQRankSum

17-7107004-TC-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7107004
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7107003
    reference: chr 17
allele count: 1
allele frequency: 8.314348903337379e-6
allele num: 120274
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000388122
  ensembl transcript: ENST00000447163
  gene symbol: DLG4
  hgvsc: ENST00000447163.1:c.425+6delG
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000465789
  ensembl transcript: ENST00000493294
  gene symbol: DLG4
  hgvsc: ENST00000493294.1:c.155+6delG
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000382428
  ensembl transcript: ENST00000399510
  gene symbol: DLG4
  hgvsc: ENST00000399510.2:c.464+6delG
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000307471
  ensembl transcript: ENST00000302955
  gene symbol: DLG4
  hgvsc: ENST00000302955.6:c.326+6delG
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000382425
  ensembl transcript: ENST00000399506
  gene symbol: DLG4
  hgvsc: ENST00000399506.2:c.335+6delG
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000465720
  ensembl transcript: ENST00000486626
  gene symbol: DLG4
  hgvsc: ENST00000486626.3:c.155+6delG
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000460625
  ensembl transcript: ENST00000485100
  gene symbol: DLG4
  hgvsc: ENST00000485100.1:c.326+6delG
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000407918
  ensembl transcript: ENST00000451807
  gene symbol: DLG4
  hgvsc: ENST00000451807.2:c.434+6delG
  variant of: http://identifiers.org/hgnc/2903
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20993
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1220
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7127
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28831
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45234
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 290
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 128
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1554
  bin: 7.75e1
  variant carriers: 0
hgvs: c.464+6delG
num of homozygotes: 0
population: East Asian
population: Other
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: TC
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum

17-7107007-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7107007
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7107007
    reference: chr 17
allele count: 1
allele frequency: 8.313381218409152e-6
allele num: 120288
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000460625
  ensembl transcript: ENST00000485100
  gene symbol: DLG4
  hgvsc: ENST00000485100.1:c.326+4G>A
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000382425
  ensembl transcript: ENST00000399506
  gene symbol: DLG4
  hgvsc: ENST00000399506.2:c.335+4G>A
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000307471
  ensembl transcript: ENST00000302955
  gene symbol: DLG4
  hgvsc: ENST00000302955.6:c.326+4G>A
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000465789
  ensembl transcript: ENST00000493294
  gene symbol: DLG4
  hgvsc: ENST00000493294.1:c.155+4G>A
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000407918
  ensembl transcript: ENST00000451807
  gene symbol: DLG4
  hgvsc: ENST00000451807.2:c.434+4G>A
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000382428
  ensembl transcript: ENST00000399510
  gene symbol: DLG4
  hgvsc: ENST00000399510.2:c.464+4G>A
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000388122
  ensembl transcript: ENST00000447163
  gene symbol: DLG4
  hgvsc: ENST00000447163.1:c.425+4G>A
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000465720
  ensembl transcript: ENST00000486626
  gene symbol: DLG4
  hgvsc: ENST00000486626.3:c.155+4G>A
  variant of: http://identifiers.org/hgnc/2903
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28864
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1229
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20974
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7161
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 299
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1950
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1564
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 136
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45247
  bin: 6.25e1
  variant carriers: 0
hgvs: c.464+4G>A
num of homozygotes: 0
population: Latino
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Other
population: African
population: European (Finnish)
reference allele: C
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: MQ

17-7107016-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7107016
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7107016
    reference: chr 17
allele count: 1
allele frequency: 8.310617645103384e-6
allele num: 120328
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000465789
  ensembl transcript: ENST00000493294
  gene symbol: DLG4
  hgvsc: ENST00000493294.1:c.150C>T
  hgvsp: ENST00000493294.1:c.150C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000382425
  ensembl transcript: ENST00000399506
  gene symbol: DLG4
  hgvsc: ENST00000399506.2:c.330C>T
  hgvsp: ENST00000399506.2:c.330C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000307471
  ensembl transcript: ENST00000302955
  gene symbol: DLG4
  hgvsc: ENST00000302955.6:c.321C>T
  hgvsp: ENST00000302955.6:c.321C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000465720
  ensembl transcript: ENST00000486626
  gene symbol: DLG4
  hgvsc: ENST00000486626.3:c.150C>T
  hgvsp: ENST00000486626.3:c.150C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000388122
  ensembl transcript: ENST00000447163
  gene symbol: DLG4
  hgvsc: ENST00000447163.1:c.420C>T
  hgvsp: ENST00000447163.1:c.420C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000407918
  ensembl transcript: ENST00000451807
  gene symbol: DLG4
  hgvsc: ENST00000451807.2:c.429C>T
  hgvsp: ENST00000451807.2:c.429C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000460625
  ensembl transcript: ENST00000485100
  gene symbol: DLG4
  hgvsc: ENST00000485100.1:c.321C>T
  hgvsp: ENST00000485100.1:c.321C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000382428
  ensembl transcript: ENST00000399510
  gene symbol: DLG4
  hgvsc: ENST00000399510.2:c.459C>T
  hgvsp: ENST00000399510.2:c.459C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2903
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7180
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29007
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1218
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20970
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45372
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Arg153Arg
num of homozygotes: 0
population: South Asian
population: East Asian
population: Other
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: DP

17-7107026-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7107026
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7107026
    reference: chr 17
allele count: 1
allele frequency: 8.304820117596252e-6
allele num: 120412
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000465720
  ensembl transcript: ENST00000486626
  gene symbol: DLG4
  hgvsc: ENST00000486626.3:c.140A>G
  hgvsp: ENSP00000465720.1:p.Gln47Arg
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000465789
  ensembl transcript: ENST00000493294
  gene symbol: DLG4
  hgvsc: ENST00000493294.1:c.140A>G
  hgvsp: ENSP00000465789.1:p.Gln47Arg
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000307471
  ensembl transcript: ENST00000302955
  gene symbol: DLG4
  hgvsc: ENST00000302955.6:c.311A>G
  hgvsp: ENSP00000307471.6:p.Gln104Arg
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000382425
  ensembl transcript: ENST00000399506
  gene symbol: DLG4
  hgvsc: ENST00000399506.2:c.320A>G
  hgvsp: ENSP00000382425.2:p.Gln107Arg
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000407918
  ensembl transcript: ENST00000451807
  gene symbol: DLG4
  hgvsc: ENST00000451807.2:c.419A>G
  hgvsp: ENSP00000407918.2:p.Gln140Arg
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000460625
  ensembl transcript: ENST00000485100
  gene symbol: DLG4
  hgvsc: ENST00000485100.1:c.311A>G
  hgvsp: ENSP00000460625.1:p.Gln104Arg
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000382428
  ensembl transcript: ENST00000399510
  gene symbol: DLG4
  hgvsc: ENST00000399510.2:c.449A>G
  hgvsp: ENSP00000382428.2:p.Gln150Arg
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000388122
  ensembl transcript: ENST00000447163
  gene symbol: DLG4
  hgvsc: ENST00000447163.1:c.410A>G
  hgvsp: ENSP00000388122.1:p.Gln137Arg
  variant of: http://identifiers.org/hgnc/2903
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7226
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 29159
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20970
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1217
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45638
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1577
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 300
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Gln150Arg
num of homozygotes: 0
population: South Asian
population: African
population: Other
population: Latino
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
reference allele: T
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: QD

17-7107070-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7107070
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7107070
    reference: chr 17
allele count: 7
allele frequency: 5.80508193458502e-5
allele num: 120584
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000465789
  ensembl transcript: ENST00000493294
  gene symbol: DLG4
  hgvsc: ENST00000493294.1:c.96A>C
  hgvsp: ENST00000493294.1:c.96A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000407918
  ensembl transcript: ENST00000451807
  gene symbol: DLG4
  hgvsc: ENST00000451807.2:c.375A>C
  hgvsp: ENST00000451807.2:c.375A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000460625
  ensembl transcript: ENST00000485100
  gene symbol: DLG4
  hgvsc: ENST00000485100.1:c.267A>C
  hgvsp: ENST00000485100.1:c.267A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000382425
  ensembl transcript: ENST00000399506
  gene symbol: DLG4
  hgvsc: ENST00000399506.2:c.276A>C
  hgvsp: ENST00000399506.2:c.276A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000465720
  ensembl transcript: ENST00000486626
  gene symbol: DLG4
  hgvsc: ENST00000486626.3:c.96A>C
  hgvsp: ENST00000486626.3:c.96A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000388122
  ensembl transcript: ENST00000447163
  gene symbol: DLG4
  hgvsc: ENST00000447163.1:c.366A>C
  hgvsp: ENST00000447163.1:c.366A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000382428
  ensembl transcript: ENST00000399510
  gene symbol: DLG4
  hgvsc: ENST00000399510.2:c.405A>C
  hgvsp: ENST00000399510.2:c.405A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000307471
  ensembl transcript: ENST00000302955
  gene symbol: DLG4
  hgvsc: ENST00000302955.6:c.267A>C
  hgvsp: ENST00000302955.6:c.267A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2903
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1222
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 525
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7256
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21069
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29248
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 139
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Pro135Pro
num of homozygotes: 0
population: Latino
population: Other
population: European (Finnish)
population: African
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS

17-7107076-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7107076
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7107076
    reference: chr 17
allele count: 1
allele frequency: 8.297102651754007e-6
allele num: 120524
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000460625
  ensembl transcript: ENST00000485100
  gene symbol: DLG4
  hgvsc: ENST00000485100.1:c.261C>T
  hgvsp: ENST00000485100.1:c.261C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000465789
  ensembl transcript: ENST00000493294
  gene symbol: DLG4
  hgvsc: ENST00000493294.1:c.90C>T
  hgvsp: ENST00000493294.1:c.90C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000382425
  ensembl transcript: ENST00000399506
  gene symbol: DLG4
  hgvsc: ENST00000399506.2:c.270C>T
  hgvsp: ENST00000399506.2:c.270C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000407918
  ensembl transcript: ENST00000451807
  gene symbol: DLG4
  hgvsc: ENST00000451807.2:c.369C>T
  hgvsp: ENST00000451807.2:c.369C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000307471
  ensembl transcript: ENST00000302955
  gene symbol: DLG4
  hgvsc: ENST00000302955.6:c.261C>T
  hgvsp: ENST00000302955.6:c.261C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000382428
  ensembl transcript: ENST00000399510
  gene symbol: DLG4
  hgvsc: ENST00000399510.2:c.399C>T
  hgvsp: ENST00000399510.2:c.399C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000388122
  ensembl transcript: ENST00000447163
  gene symbol: DLG4
  hgvsc: ENST00000447163.1:c.360C>T
  hgvsp: ENST00000447163.1:c.360C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000465720
  ensembl transcript: ENST00000486626
  gene symbol: DLG4
  hgvsc: ENST00000486626.3:c.90C>T
  hgvsp: ENST00000486626.3:c.90C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2903
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7249
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1231
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29172
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21061
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1601
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Asp133Asp
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: East Asian
population: African
population: European (Finnish)
population: South Asian
population: Other
reference allele: G
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP

17-7107082-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7107082
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7107082
    reference: chr 17
allele count: 1
allele frequency: 8.299719469481931e-6
allele num: 120486
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000382428
  ensembl transcript: ENST00000399510
  gene symbol: DLG4
  hgvsc: ENST00000399510.2:c.393C>T
  hgvsp: ENST00000399510.2:c.393C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000465720
  ensembl transcript: ENST00000486626
  gene symbol: DLG4
  hgvsc: ENST00000486626.3:c.84C>T
  hgvsp: ENST00000486626.3:c.84C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000465789
  ensembl transcript: ENST00000493294
  gene symbol: DLG4
  hgvsc: ENST00000493294.1:c.84C>T
  hgvsp: ENST00000493294.1:c.84C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000407918
  ensembl transcript: ENST00000451807
  gene symbol: DLG4
  hgvsc: ENST00000451807.2:c.363C>T
  hgvsp: ENST00000451807.2:c.363C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000388122
  ensembl transcript: ENST00000447163
  gene symbol: DLG4
  hgvsc: ENST00000447163.1:c.354C>T
  hgvsp: ENST00000447163.1:c.354C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000382425
  ensembl transcript: ENST00000399506
  gene symbol: DLG4
  hgvsc: ENST00000399506.2:c.264C>T
  hgvsp: ENST00000399506.2:c.264C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000307471
  ensembl transcript: ENST00000302955
  gene symbol: DLG4
  hgvsc: ENST00000302955.6:c.255C>T
  hgvsp: ENST00000302955.6:c.255C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000460625
  ensembl transcript: ENST00000485100
  gene symbol: DLG4
  hgvsc: ENST00000485100.1:c.255C>T
  hgvsp: ENST00000485100.1:c.255C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2903
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7228
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1221
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21063
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29152
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 293
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1966
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 147
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Ile131Ile
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Other
population: South Asian
population: Latino
population: African
population: European (Non-Finnish)
reference allele: G
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP

17-7107090-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7107090
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7107090
    reference: chr 17
allele count: 1
allele frequency: 8.306199747491528e-6
allele num: 120392
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000407918
  ensembl transcript: ENST00000451807
  gene symbol: DLG4
  hgvsc: ENST00000451807.2:c.355C>A
  hgvsp: ENSP00000407918.2:p.Pro119Thr
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000465789
  ensembl transcript: ENST00000493294
  gene symbol: DLG4
  hgvsc: ENST00000493294.1:c.76C>A
  hgvsp: ENSP00000465789.1:p.Pro26Thr
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000465720
  ensembl transcript: ENST00000486626
  gene symbol: DLG4
  hgvsc: ENST00000486626.3:c.76C>A
  hgvsp: ENSP00000465720.1:p.Pro26Thr
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000307471
  ensembl transcript: ENST00000302955
  gene symbol: DLG4
  hgvsc: ENST00000302955.6:c.247C>A
  hgvsp: ENSP00000307471.6:p.Pro83Thr
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000382428
  ensembl transcript: ENST00000399510
  gene symbol: DLG4
  hgvsc: ENST00000399510.2:c.385C>A
  hgvsp: ENSP00000382428.2:p.Pro129Thr
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000382425
  ensembl transcript: ENST00000399506
  gene symbol: DLG4
  hgvsc: ENST00000399506.2:c.256C>A
  hgvsp: ENSP00000382425.2:p.Pro86Thr
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000460625
  ensembl transcript: ENST00000485100
  gene symbol: DLG4
  hgvsc: ENST00000485100.1:c.247C>A
  hgvsp: ENSP00000460625.1:p.Pro83Thr
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000388122
  ensembl transcript: ENST00000447163
  gene symbol: DLG4
  hgvsc: ENST00000447163.1:c.346C>A
  hgvsp: ENSP00000388122.1:p.Pro116Thr
  variant of: http://identifiers.org/hgnc/2903
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20995
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1214
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29073
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7189
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 300
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 155
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45429
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1962
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 379
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Pro129Thr
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: East Asian
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: QD

17-7107091-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7107091
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7107091
    reference: chr 17
allele count: 1
allele frequency: 8.306199747491528e-6
allele num: 120392
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000382428
  ensembl transcript: ENST00000399510
  gene symbol: DLG4
  hgvsc: ENST00000399510.2:c.384C>T
  hgvsp: ENST00000399510.2:c.384C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000465789
  ensembl transcript: ENST00000493294
  gene symbol: DLG4
  hgvsc: ENST00000493294.1:c.75C>T
  hgvsp: ENST00000493294.1:c.75C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000407918
  ensembl transcript: ENST00000451807
  gene symbol: DLG4
  hgvsc: ENST00000451807.2:c.354C>T
  hgvsp: ENST00000451807.2:c.354C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000388122
  ensembl transcript: ENST00000447163
  gene symbol: DLG4
  hgvsc: ENST00000447163.1:c.345C>T
  hgvsp: ENST00000447163.1:c.345C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000460625
  ensembl transcript: ENST00000485100
  gene symbol: DLG4
  hgvsc: ENST00000485100.1:c.246C>T
  hgvsp: ENST00000485100.1:c.246C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000307471
  ensembl transcript: ENST00000302955
  gene symbol: DLG4
  hgvsc: ENST00000302955.6:c.246C>T
  hgvsp: ENST00000302955.6:c.246C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000465720
  ensembl transcript: ENST00000486626
  gene symbol: DLG4
  hgvsc: ENST00000486626.3:c.75C>T
  hgvsp: ENST00000486626.3:c.75C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000382425
  ensembl transcript: ENST00000399506
  gene symbol: DLG4
  hgvsc: ENST00000399506.2:c.255C>T
  hgvsp: ENST00000399506.2:c.255C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2903
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21011
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7188
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29061
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1214
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1966
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 376
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 729
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45492
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Asn128Asn
num of homozygotes: 0
population: Other
population: African
population: South Asian
population: Latino
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum

17-7107121-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7107121
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7107121
    reference: chr 17
allele count: 2
allele frequency: 1.682651859330305e-5
allele num: 118860
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000382425
  ensembl transcript: ENST00000399506
  gene symbol: DLG4
  hgvsc: ENST00000399506.2:c.225G>A
  hgvsp: ENST00000399506.2:c.225G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000465720
  ensembl transcript: ENST00000486626
  gene symbol: DLG4
  hgvsc: ENST00000486626.3:c.45G>A
  hgvsp: ENST00000486626.3:c.45G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000407918
  ensembl transcript: ENST00000451807
  gene symbol: DLG4
  hgvsc: ENST00000451807.2:c.324G>A
  hgvsp: ENST00000451807.2:c.324G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000382428
  ensembl transcript: ENST00000399510
  gene symbol: DLG4
  hgvsc: ENST00000399510.2:c.354G>A
  hgvsp: ENST00000399510.2:c.354G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000307471
  ensembl transcript: ENST00000302955
  gene symbol: DLG4
  hgvsc: ENST00000302955.6:c.216G>A
  hgvsp: ENST00000302955.6:c.216G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000465789
  ensembl transcript: ENST00000493294
  gene symbol: DLG4
  hgvsc: ENST00000493294.1:c.45G>A
  hgvsp: ENST00000493294.1:c.45G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000460625
  ensembl transcript: ENST00000485100
  gene symbol: DLG4
  hgvsc: ENST00000485100.1:c.216G>A
  hgvsp: ENST00000485100.1:c.216G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000388122
  ensembl transcript: ENST00000447163
  gene symbol: DLG4
  hgvsc: ENST00000447163.1:c.315G>A
  hgvsp: ENST00000447163.1:c.315G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2903
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27617
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2083
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19731
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6826
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 911
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1175
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 726
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 619
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 206
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1089
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 321
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Leu118Leu
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: European (Finnish)
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD

17-7107124-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7107124
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7107124
    reference: chr 17
allele count: 1
allele frequency: 8.452228007302725e-6
allele num: 118312
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000460625
  ensembl transcript: ENST00000485100
  gene symbol: DLG4
  hgvsc: ENST00000485100.1:c.213T>C
  hgvsp: ENST00000485100.1:c.213T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000407918
  ensembl transcript: ENST00000451807
  gene symbol: DLG4
  hgvsc: ENST00000451807.2:c.321T>C
  hgvsp: ENST00000451807.2:c.321T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000388122
  ensembl transcript: ENST00000447163
  gene symbol: DLG4
  hgvsc: ENST00000447163.1:c.312T>C
  hgvsp: ENST00000447163.1:c.312T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000382428
  ensembl transcript: ENST00000399510
  gene symbol: DLG4
  hgvsc: ENST00000399510.2:c.351T>C
  hgvsp: ENST00000399510.2:c.351T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000465720
  ensembl transcript: ENST00000486626
  gene symbol: DLG4
  hgvsc: ENST00000486626.3:c.42T>C
  hgvsp: ENST00000486626.3:c.42T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000465789
  ensembl transcript: ENST00000493294
  gene symbol: DLG4
  hgvsc: ENST00000493294.1:c.42T>C
  hgvsp: ENST00000493294.1:c.42T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000307471
  ensembl transcript: ENST00000302955
  gene symbol: DLG4
  hgvsc: ENST00000302955.6:c.213T>C
  hgvsp: ENST00000302955.6:c.213T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000382425
  ensembl transcript: ENST00000399506
  gene symbol: DLG4
  hgvsc: ENST00000399506.2:c.222T>C
  hgvsp: ENST00000399506.2:c.222T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2903
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 19096
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1178
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1014
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1165
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6710
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26994
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 507
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2919
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 478
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 487
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 260
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2834
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 163
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 285
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Gly117Gly
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: European (Finnish)
population: African
population: Other
reference allele: A
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff

17-7107138-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7107138
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7107138
    reference: chr 17
allele count: 1
allele frequency: 8.618906433151761e-6
allele num: 116024
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000382425
  ensembl transcript: ENST00000399506
  gene symbol: DLG4
  hgvsc: ENST00000399506.2:c.211-3C>A
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000465720
  ensembl transcript: ENST00000486626
  gene symbol: DLG4
  hgvsc: ENST00000486626.3:c.31-3C>A
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000307471
  ensembl transcript: ENST00000302955
  gene symbol: DLG4
  hgvsc: ENST00000302955.6:c.202-3C>A
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000465789
  ensembl transcript: ENST00000493294
  gene symbol: DLG4
  hgvsc: ENST00000493294.1:c.31-3C>A
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000460625
  ensembl transcript: ENST00000485100
  gene symbol: DLG4
  hgvsc: ENST00000485100.1:c.202-3C>A
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000388122
  ensembl transcript: ENST00000447163
  gene symbol: DLG4
  hgvsc: ENST00000447163.1:c.301-3C>A
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000382428
  ensembl transcript: ENST00000399510
  gene symbol: DLG4
  hgvsc: ENST00000399510.2:c.340-3C>A
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000407918
  ensembl transcript: ENST00000451807
  gene symbol: DLG4
  hgvsc: ENST00000451807.2:c.310-3C>A
  variant of: http://identifiers.org/hgnc/2903
canonical: true
consequence: splice region
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 494
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2695
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23250
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7528
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2200
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5937
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16319
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1123
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2376
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 278
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 445
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 512
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 1.25e1
  variant carriers: 0
hgvs: c.340-3C>A
num of homozygotes: 0
population: South Asian
population: Other
population: Latino
population: East Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
reference allele: G
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff

17-7107139-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7107139
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7107139
    reference: chr 17
allele count: 4
allele frequency: 3.447919180774402e-5
allele num: 116012
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000465720
  ensembl transcript: ENST00000486626
  gene symbol: DLG4
  hgvsc: ENST00000486626.3:c.31-4C>T
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000307471
  ensembl transcript: ENST00000302955
  gene symbol: DLG4
  hgvsc: ENST00000302955.6:c.202-4C>T
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000460625
  ensembl transcript: ENST00000485100
  gene symbol: DLG4
  hgvsc: ENST00000485100.1:c.202-4C>T
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000382425
  ensembl transcript: ENST00000399506
  gene symbol: DLG4
  hgvsc: ENST00000399506.2:c.211-4C>T
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000465789
  ensembl transcript: ENST00000493294
  gene symbol: DLG4
  hgvsc: ENST00000493294.1:c.31-4C>T
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000382428
  ensembl transcript: ENST00000399510
  gene symbol: DLG4
  hgvsc: ENST00000399510.2:c.340-4C>T
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000407918
  ensembl transcript: ENST00000451807
  gene symbol: DLG4
  hgvsc: ENST00000451807.2:c.310-4C>T
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000388122
  ensembl transcript: ENST00000447163
  gene symbol: DLG4
  hgvsc: ENST00000447163.1:c.301-4C>T
  variant of: http://identifiers.org/hgnc/2903
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2215
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1107
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16411
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 494
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5839
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7554
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23255
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2673
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 278
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 849
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6112
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6235
  bin: 6.75e1
  variant carriers: 0
hgvs: c.340-4C>T
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
population: European (Finnish)
population: Latino
reference allele: G
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum

17-7107142-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7107142
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7107142
    reference: chr 17
allele count: 1
allele frequency: 8.666112035496396e-6
allele num: 115392
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000465720
  ensembl transcript: ENST00000486626
  gene symbol: DLG4
  hgvsc: ENST00000486626.3:c.31-7C>T
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000382428
  ensembl transcript: ENST00000399510
  gene symbol: DLG4
  hgvsc: ENST00000399510.2:c.340-7C>T
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000307471
  ensembl transcript: ENST00000302955
  gene symbol: DLG4
  hgvsc: ENST00000302955.6:c.202-7C>T
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000388122
  ensembl transcript: ENST00000447163
  gene symbol: DLG4
  hgvsc: ENST00000447163.1:c.301-7C>T
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000407918
  ensembl transcript: ENST00000451807
  gene symbol: DLG4
  hgvsc: ENST00000451807.2:c.310-7C>T
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000465789
  ensembl transcript: ENST00000493294
  gene symbol: DLG4
  hgvsc: ENST00000493294.1:c.31-7C>T
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000382425
  ensembl transcript: ENST00000399506
  gene symbol: DLG4
  hgvsc: ENST00000399506.2:c.211-7C>T
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000460625
  ensembl transcript: ENST00000485100
  gene symbol: DLG4
  hgvsc: ENST00000485100.1:c.202-7C>T
  variant of: http://identifiers.org/hgnc/2903
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2482
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9521
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3651
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15336
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5399
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1083
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21553
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 499
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 230
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30787
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7190
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1458
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5575
  bin: 6.75e1
  variant carriers: 0
hgvs: c.340-7C>T
num of homozygotes: 0
population: East Asian
population: African
population: South Asian
population: European (Finnish)
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: ReadPosRankSum

17-7107145-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7107145
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7107145
    reference: chr 17
allele count: 1
allele frequency: 8.668966832532898e-6
allele num: 115354
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000460625
  ensembl transcript: ENST00000485100
  gene symbol: DLG4
  hgvsc: ENST00000485100.1:c.202-10C>G
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000307471
  ensembl transcript: ENST00000302955
  gene symbol: DLG4
  hgvsc: ENST00000302955.6:c.202-10C>G
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000465789
  ensembl transcript: ENST00000493294
  gene symbol: DLG4
  hgvsc: ENST00000493294.1:c.31-10C>G
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000382428
  ensembl transcript: ENST00000399510
  gene symbol: DLG4
  hgvsc: ENST00000399510.2:c.340-10C>G
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000465720
  ensembl transcript: ENST00000486626
  gene symbol: DLG4
  hgvsc: ENST00000486626.3:c.31-10C>G
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000388122
  ensembl transcript: ENST00000447163
  gene symbol: DLG4
  hgvsc: ENST00000447163.1:c.301-10C>G
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000407918
  ensembl transcript: ENST00000451807
  gene symbol: DLG4
  hgvsc: ENST00000451807.2:c.310-10C>G
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000382425
  ensembl transcript: ENST00000399506
  gene symbol: DLG4
  hgvsc: ENST00000399506.2:c.211-10C>G
  variant of: http://identifiers.org/hgnc/2903
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9567
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2517
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3606
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1063
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21483
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5253
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15545
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 491
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2663
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3215
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1251
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5547
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32688
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 221
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: African
population: South Asian
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: G
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum

17-7107146-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7107146
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7107146
    reference: chr 17
allele count: 1
allele frequency: 8.703523186185769e-6
allele num: 114896
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000465720
  ensembl transcript: ENST00000486626
  gene symbol: DLG4
  hgvsc: ENST00000486626.3:c.31-11C>G
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000307471
  ensembl transcript: ENST00000302955
  gene symbol: DLG4
  hgvsc: ENST00000302955.6:c.202-11C>G
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000382428
  ensembl transcript: ENST00000399510
  gene symbol: DLG4
  hgvsc: ENST00000399510.2:c.340-11C>G
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000407918
  ensembl transcript: ENST00000451807
  gene symbol: DLG4
  hgvsc: ENST00000451807.2:c.310-11C>G
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000460625
  ensembl transcript: ENST00000485100
  gene symbol: DLG4
  hgvsc: ENST00000485100.1:c.202-11C>G
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000465789
  ensembl transcript: ENST00000493294
  gene symbol: DLG4
  hgvsc: ENST00000493294.1:c.31-11C>G
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000382425
  ensembl transcript: ENST00000399506
  gene symbol: DLG4
  hgvsc: ENST00000399506.2:c.211-11C>G
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000388122
  ensembl transcript: ENST00000447163
  gene symbol: DLG4
  hgvsc: ENST00000447163.1:c.301-11C>G
  variant of: http://identifiers.org/hgnc/2903
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2697
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14518
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11409
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1060
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 485
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4902
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19584
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4841
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4125
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8166
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 739
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 140
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1465
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1140
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
population: Other
population: South Asian
reference allele: G
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ

17-7107148-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7107148
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7107148
    reference: chr 17
allele count: 1
allele frequency: 8.709890952165279e-6
allele num: 114812
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000388122
  ensembl transcript: ENST00000447163
  gene symbol: DLG4
  hgvsc: ENST00000447163.1:c.301-13C>T
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000382428
  ensembl transcript: ENST00000399510
  gene symbol: DLG4
  hgvsc: ENST00000399510.2:c.340-13C>T
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000460625
  ensembl transcript: ENST00000485100
  gene symbol: DLG4
  hgvsc: ENST00000485100.1:c.202-13C>T
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000407918
  ensembl transcript: ENST00000451807
  gene symbol: DLG4
  hgvsc: ENST00000451807.2:c.310-13C>T
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000382425
  ensembl transcript: ENST00000399506
  gene symbol: DLG4
  hgvsc: ENST00000399506.2:c.211-13C>T
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000465789
  ensembl transcript: ENST00000493294
  gene symbol: DLG4
  hgvsc: ENST00000493294.1:c.31-13C>T
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000307471
  ensembl transcript: ENST00000302955
  gene symbol: DLG4
  hgvsc: ENST00000302955.6:c.202-13C>T
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000465720
  ensembl transcript: ENST00000486626
  gene symbol: DLG4
  hgvsc: ENST00000486626.3:c.31-13C>T
  variant of: http://identifiers.org/hgnc/2903
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14721
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11432
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2720
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4687
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19520
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1047
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4886
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1087
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 283
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 758
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29323
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4130
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1211
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2473
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: Latino
population: European (Non-Finnish)
population: South Asian
population: African
population: European (Finnish)
reference allele: G
site quality: QD
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum

17-7107149-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7107149
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7107149
    reference: chr 17
allele count: 0
allele frequency: 0.0e0
allele num: 114742
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000465720
  ensembl transcript: ENST00000486626
  gene symbol: DLG4
  hgvsc: ENST00000486626.3:c.31-14C>T
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000382425
  ensembl transcript: ENST00000399506
  gene symbol: DLG4
  hgvsc: ENST00000399506.2:c.211-14C>T
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000388122
  ensembl transcript: ENST00000447163
  gene symbol: DLG4
  hgvsc: ENST00000447163.1:c.301-14C>T
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000382428
  ensembl transcript: ENST00000399510
  gene symbol: DLG4
  hgvsc: ENST00000399510.2:c.340-14C>T
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000465789
  ensembl transcript: ENST00000493294
  gene symbol: DLG4
  hgvsc: ENST00000493294.1:c.31-14C>T
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000407918
  ensembl transcript: ENST00000451807
  gene symbol: DLG4
  hgvsc: ENST00000451807.2:c.310-14C>T
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000460625
  ensembl transcript: ENST00000485100
  gene symbol: DLG4
  hgvsc: ENST00000485100.1:c.202-14C>T
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000307471
  ensembl transcript: ENST00000302955
  gene symbol: DLG4
  hgvsc: ENST00000302955.6:c.202-14C>T
  variant of: http://identifiers.org/hgnc/2903
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4869
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14735
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 481
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4622
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2738
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19537
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11469
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1045
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 121
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1085
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1347
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 608
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4128
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1201
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 269
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: African
population: European (Non-Finnish)
population: Other
population: East Asian
population: European (Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum

17-7107157-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7107157
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7107157
    reference: chr 17
allele count: 1
allele frequency: 8.799718409010911e-6
allele num: 113640
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000307471
  ensembl transcript: ENST00000302955
  gene symbol: DLG4
  hgvsc: ENST00000302955.6:c.202-22C>G
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000407918
  ensembl transcript: ENST00000451807
  gene symbol: DLG4
  hgvsc: ENST00000451807.2:c.310-22C>G
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000465720
  ensembl transcript: ENST00000486626
  gene symbol: DLG4
  hgvsc: ENST00000486626.3:c.31-22C>G
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000382425
  ensembl transcript: ENST00000399506
  gene symbol: DLG4
  hgvsc: ENST00000399506.2:c.211-22C>G
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000465789
  ensembl transcript: ENST00000493294
  gene symbol: DLG4
  hgvsc: ENST00000493294.1:c.31-22C>G
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000460625
  ensembl transcript: ENST00000485100
  gene symbol: DLG4
  hgvsc: ENST00000485100.1:c.202-22C>G
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000382428
  ensembl transcript: ENST00000399510
  gene symbol: DLG4
  hgvsc: ENST00000399510.2:c.340-22C>G
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000388122
  ensembl transcript: ENST00000447163
  gene symbol: DLG4
  hgvsc: ENST00000447163.1:c.301-22C>G
  variant of: http://identifiers.org/hgnc/2903
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14807
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12592
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14936
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 990
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8692
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3786
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3130
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1145
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4506
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1099
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 417
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 248
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6162
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 143
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9654
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: South Asian
population: Other
population: African
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ

http://identifiers.org/exac.variant/17-7107160-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7107160
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7107160
    reference: chr 17
allele count: 1
allele frequency: 8.862576882854458e-6
allele num: 112834
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000382428
  ensembl transcript: ENST00000399510
  gene symbol: DLG4
  hgvsc: ENST00000399510.2:c.340-25G>T
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000465720
  ensembl transcript: ENST00000486626
  gene symbol: DLG4
  hgvsc: ENST00000486626.3:c.31-25G>T
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000460625
  ensembl transcript: ENST00000485100
  gene symbol: DLG4
  hgvsc: ENST00000485100.1:c.202-25G>T
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000307471
  ensembl transcript: ENST00000302955
  gene symbol: DLG4
  hgvsc: ENST00000302955.6:c.202-25G>T
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000382425
  ensembl transcript: ENST00000399506
  gene symbol: DLG4
  hgvsc: ENST00000399506.2:c.211-25G>T
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000407918
  ensembl transcript: ENST00000451807
  gene symbol: DLG4
  hgvsc: ENST00000451807.2:c.310-25G>T
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000388122
  ensembl transcript: ENST00000447163
  gene symbol: DLG4
  hgvsc: ENST00000447163.1:c.301-25G>T
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000465789
  ensembl transcript: ENST00000493294
  gene symbol: DLG4
  hgvsc: ENST00000493294.1:c.31-25G>T
  variant of: http://identifiers.org/hgnc/2903
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12614
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11253
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3377
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11697
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15641
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3315
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 481
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 970
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3879
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 913
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9859
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18342
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 270
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1257
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 508
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 396
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: Latino
reference allele: C
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: QD

17-7107160-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7107160
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7107160
    reference: chr 17
allele count: 1
allele frequency: 8.862576882854458e-6
allele num: 112834
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000407918
  ensembl transcript: ENST00000451807
  gene symbol: DLG4
  hgvsc: ENST00000451807.2:c.310-25G>A
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000460625
  ensembl transcript: ENST00000485100
  gene symbol: DLG4
  hgvsc: ENST00000485100.1:c.202-25G>A
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000382425
  ensembl transcript: ENST00000399506
  gene symbol: DLG4
  hgvsc: ENST00000399506.2:c.211-25G>A
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000465789
  ensembl transcript: ENST00000493294
  gene symbol: DLG4
  hgvsc: ENST00000493294.1:c.31-25G>A
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000382428
  ensembl transcript: ENST00000399510
  gene symbol: DLG4
  hgvsc: ENST00000399510.2:c.340-25G>A
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000388122
  ensembl transcript: ENST00000447163
  gene symbol: DLG4
  hgvsc: ENST00000447163.1:c.301-25G>A
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000307471
  ensembl transcript: ENST00000302955
  gene symbol: DLG4
  hgvsc: ENST00000302955.6:c.202-25G>A
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000465720
  ensembl transcript: ENST00000486626
  gene symbol: DLG4
  hgvsc: ENST00000486626.3:c.31-25G>A
  variant of: http://identifiers.org/hgnc/2903
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12614
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11697
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3377
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 481
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 970
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15641
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3315
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11253
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1779
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 913
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3879
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7056
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1576
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9859
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4762
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 508
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: Latino
population: European (Finnish)
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD

17-7107174-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7107174
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7107174
    reference: chr 17
allele count: 1
allele frequency: 9.074410163339384e-6
allele num: 110200
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000407918
  ensembl transcript: ENST00000451807
  gene symbol: DLG4
  hgvsc: ENST00000451807.2:c.310-39C>T
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000465720
  ensembl transcript: ENST00000486626
  gene symbol: DLG4
  hgvsc: ENST00000486626.3:c.31-39C>T
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000307471
  ensembl transcript: ENST00000302955
  gene symbol: DLG4
  hgvsc: ENST00000302955.6:c.202-39C>T
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000382425
  ensembl transcript: ENST00000399506
  gene symbol: DLG4
  hgvsc: ENST00000399506.2:c.211-39C>T
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000460625
  ensembl transcript: ENST00000485100
  gene symbol: DLG4
  hgvsc: ENST00000485100.1:c.202-39C>T
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000465789
  ensembl transcript: ENST00000493294
  gene symbol: DLG4
  hgvsc: ENST00000493294.1:c.31-39C>T
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000388122
  ensembl transcript: ENST00000447163
  gene symbol: DLG4
  hgvsc: ENST00000447163.1:c.301-39C>T
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000382428
  ensembl transcript: ENST00000399510
  gene symbol: DLG4
  hgvsc: ENST00000399510.2:c.340-39C>T
  variant of: http://identifiers.org/hgnc/2903
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8326
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4447
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 480
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10663
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 928
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 506
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15973
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2654
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15782
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2958
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 271
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 203
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 748
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12340
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3484
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1480
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 916
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: Latino
reference allele: G
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: FS

17-7107284-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7107284
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7107284
    reference: chr 17
allele count: 1
allele frequency: 1.083118514827892e-5
allele num: 92326
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000382425
  ensembl transcript: ENST00000399506
  gene symbol: DLG4
  hgvsc: ENST00000399506.2:c.210+43T>C
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000307471
  ensembl transcript: ENST00000302955
  gene symbol: DLG4
  hgvsc: ENST00000302955.6:c.201+43T>C
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000465789
  ensembl transcript: ENST00000493294
  gene symbol: DLG4
  hgvsc: ENST00000493294.1:c.30+43T>C
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000465720
  ensembl transcript: ENST00000486626
  gene symbol: DLG4
  hgvsc: ENST00000486626.3:c.30+43T>C
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000382428
  ensembl transcript: ENST00000399510
  gene symbol: DLG4
  hgvsc: ENST00000399510.2:c.339+43T>C
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000460625
  ensembl transcript: ENST00000485100
  gene symbol: DLG4
  hgvsc: ENST00000485100.1:c.201+43T>C
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000407918
  ensembl transcript: ENST00000451807
  gene symbol: DLG4
  hgvsc: ENST00000451807.2:c.309+43T>C
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000388122
  ensembl transcript: ENST00000447163
  gene symbol: DLG4
  hgvsc: ENST00000447163.1:c.300+43T>C
  variant of: http://identifiers.org/hgnc/2903
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1065
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12729
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1157
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5825
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1207
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1164
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 679
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18350
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2235
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1188
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 912
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9638
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2830
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6728
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1134
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1229
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5360
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1606
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 444
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 199
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15484
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: European (Non-Finnish)
population: East Asian
population: Other
population: European (Finnish)
population: South Asian
reference allele: A
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ

17-7107287-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7107287
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7107287
    reference: chr 17
allele count: 713
allele frequency: 7.81541159706237e-3
allele num: 91230
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000307471
  ensembl transcript: ENST00000302955
  gene symbol: DLG4
  hgvsc: ENST00000302955.6:c.201+40G>A
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000460625
  ensembl transcript: ENST00000485100
  gene symbol: DLG4
  hgvsc: ENST00000485100.1:c.201+40G>A
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000407918
  ensembl transcript: ENST00000451807
  gene symbol: DLG4
  hgvsc: ENST00000451807.2:c.309+40G>A
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000465720
  ensembl transcript: ENST00000486626
  gene symbol: DLG4
  hgvsc: ENST00000486626.3:c.30+40G>A
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000382425
  ensembl transcript: ENST00000399506
  gene symbol: DLG4
  hgvsc: ENST00000399506.2:c.210+40G>A
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000388122
  ensembl transcript: ENST00000447163
  gene symbol: DLG4
  hgvsc: ENST00000447163.1:c.300+40G>A
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000465789
  ensembl transcript: ENST00000493294
  gene symbol: DLG4
  hgvsc: ENST00000493294.1:c.30+40G>A
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000382428
  ensembl transcript: ENST00000399510
  gene symbol: DLG4
  hgvsc: ENST00000399510.2:c.339+40G>A
  variant of: http://identifiers.org/hgnc/2903
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1162
  bin: 3.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 9305
  bin: 1.75e1
  variant carriers: 185
genotype depth: GenotypeDepth
  all individuals: 1068
  bin: 4.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 1212
  bin: 4.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 677
  bin: 5.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 1181
  bin: 3.25e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 1114
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 12652
  bin: 7.5e0
  variant carriers: 88
genotype depth: GenotypeDepth
  all individuals: 2833
  bin: 9.75e1
  variant carriers: 109
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 6.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 6.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 2364
  bin: 2.75e1
  variant carriers: 28
genotype depth: GenotypeDepth
  all individuals: 6322
  bin: 2.25e1
  variant carriers: 77
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 7.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 9.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 912
  bin: 5.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 18159
  bin: 1.25e1
  variant carriers: 206
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2050
  bin: 1.75e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 1053
  bin: 1.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 4836
  bin: 2.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 1022
  bin: 6.75e1
  variant carriers: 12
genotype quality: GenotypeQuality
  all individuals: 502
  bin: 8.25e1
  variant carriers: 19
genotype quality: GenotypeQuality
  all individuals: 6432
  bin: 3.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 434
  bin: 7.25e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 518
  bin: 9.25e1
  variant carriers: 12
num of homozygotes: 32
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: South Asian
population: Latino
population: Other
population: East Asian
reference allele: C
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD

17-7107288-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7107288
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7107288
    reference: chr 17
allele count: 3
allele frequency: 3.257682701704854e-5
allele num: 92090
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000382428
  ensembl transcript: ENST00000399510
  gene symbol: DLG4
  hgvsc: ENST00000399510.2:c.339+39C>T
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000307471
  ensembl transcript: ENST00000302955
  gene symbol: DLG4
  hgvsc: ENST00000302955.6:c.201+39C>T
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000465720
  ensembl transcript: ENST00000486626
  gene symbol: DLG4
  hgvsc: ENST00000486626.3:c.30+39C>T
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000407918
  ensembl transcript: ENST00000451807
  gene symbol: DLG4
  hgvsc: ENST00000451807.2:c.309+39C>T
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000382425
  ensembl transcript: ENST00000399506
  gene symbol: DLG4
  hgvsc: ENST00000399506.2:c.210+39C>T
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000465789
  ensembl transcript: ENST00000493294
  gene symbol: DLG4
  hgvsc: ENST00000493294.1:c.30+39C>T
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000460625
  ensembl transcript: ENST00000485100
  gene symbol: DLG4
  hgvsc: ENST00000485100.1:c.201+39C>T
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000388122
  ensembl transcript: ENST00000447163
  gene symbol: DLG4
  hgvsc: ENST00000447163.1:c.300+39C>T
  variant of: http://identifiers.org/hgnc/2903
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 915
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2491
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7027
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1192
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17972
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1066
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12709
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1162
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1208
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8654
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1072
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 675
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2831
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15935
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 382
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 894
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1113
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6465
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4903
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1368
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 319
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: Latino
population: African
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: G
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: MQRankSum

17-7107297-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7107297
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7107297
    reference: chr 17
allele count: 1
allele frequency: 1.07870210562651e-5
allele num: 92704
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000465720
  ensembl transcript: ENST00000486626
  gene symbol: DLG4
  hgvsc: ENST00000486626.3:c.30+30G>C
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000388122
  ensembl transcript: ENST00000447163
  gene symbol: DLG4
  hgvsc: ENST00000447163.1:c.300+30G>C
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000382428
  ensembl transcript: ENST00000399510
  gene symbol: DLG4
  hgvsc: ENST00000399510.2:c.339+30G>C
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000465789
  ensembl transcript: ENST00000493294
  gene symbol: DLG4
  hgvsc: ENST00000493294.1:c.30+30G>C
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000307471
  ensembl transcript: ENST00000302955
  gene symbol: DLG4
  hgvsc: ENST00000302955.6:c.201+30G>C
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000460625
  ensembl transcript: ENST00000485100
  gene symbol: DLG4
  hgvsc: ENST00000485100.1:c.201+30G>C
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000407918
  ensembl transcript: ENST00000451807
  gene symbol: DLG4
  hgvsc: ENST00000451807.2:c.309+30G>C
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000382425
  ensembl transcript: ENST00000399506
  gene symbol: DLG4
  hgvsc: ENST00000399506.2:c.210+30G>C
  variant of: http://identifiers.org/hgnc/2903
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2923
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 914
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5433
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12707
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1236
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16045
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1212
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 676
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11966
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 809
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1166
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2832
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1067
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 592
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 282
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 323
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8164
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1221
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5594
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 716
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 472
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: Other
population: East Asian
population: South Asian
population: African
population: European (Finnish)
reference allele: C
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD

17-7107297-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7107297
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7107297
    reference: chr 17
allele count: 6
allele frequency: 6.472212633759061e-5
allele num: 92704
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000407918
  ensembl transcript: ENST00000451807
  gene symbol: DLG4
  hgvsc: ENST00000451807.2:c.309+30G>A
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000382425
  ensembl transcript: ENST00000399506
  gene symbol: DLG4
  hgvsc: ENST00000399506.2:c.210+30G>A
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000382428
  ensembl transcript: ENST00000399510
  gene symbol: DLG4
  hgvsc: ENST00000399510.2:c.339+30G>A
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000465789
  ensembl transcript: ENST00000493294
  gene symbol: DLG4
  hgvsc: ENST00000493294.1:c.30+30G>A
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000460625
  ensembl transcript: ENST00000485100
  gene symbol: DLG4
  hgvsc: ENST00000485100.1:c.201+30G>A
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000465720
  ensembl transcript: ENST00000486626
  gene symbol: DLG4
  hgvsc: ENST00000486626.3:c.30+30G>A
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000307471
  ensembl transcript: ENST00000302955
  gene symbol: DLG4
  hgvsc: ENST00000302955.6:c.201+30G>A
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000388122
  ensembl transcript: ENST00000447163
  gene symbol: DLG4
  hgvsc: ENST00000447163.1:c.300+30G>A
  variant of: http://identifiers.org/hgnc/2903
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11966
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1067
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5433
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 914
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 809
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 676
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2923
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16045
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1236
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1166
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12707
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2832
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1212
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 474
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 592
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1221
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1292
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 938
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 323
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1128
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4489
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Latino
population: African
population: Other
reference allele: C
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD

17-7107298-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7107298
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7107298
    reference: chr 17
allele count: 0
allele frequency: 0.0e0
allele num: 93076
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000460625
  ensembl transcript: ENST00000485100
  gene symbol: DLG4
  hgvsc: ENST00000485100.1:c.201+29C>T
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000382428
  ensembl transcript: ENST00000399510
  gene symbol: DLG4
  hgvsc: ENST00000399510.2:c.339+29C>T
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000465789
  ensembl transcript: ENST00000493294
  gene symbol: DLG4
  hgvsc: ENST00000493294.1:c.30+29C>T
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000382425
  ensembl transcript: ENST00000399506
  gene symbol: DLG4
  hgvsc: ENST00000399506.2:c.210+29C>T
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000307471
  ensembl transcript: ENST00000302955
  gene symbol: DLG4
  hgvsc: ENST00000302955.6:c.201+29C>T
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000465720
  ensembl transcript: ENST00000486626
  gene symbol: DLG4
  hgvsc: ENST00000486626.3:c.30+29C>T
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000407918
  ensembl transcript: ENST00000451807
  gene symbol: DLG4
  hgvsc: ENST00000451807.2:c.309+29C>T
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000388122
  ensembl transcript: ENST00000447163
  gene symbol: DLG4
  hgvsc: ENST00000447163.1:c.300+29C>T
  variant of: http://identifiers.org/hgnc/2903
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2831
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1255
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1211
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3066
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12672
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 756
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 914
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 675
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4824
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15586
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1169
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1068
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12963
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 851
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 272
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 327
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 525
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1388
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 296
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 939
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17106
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: MQ
site quality: ClippingRankSum

17-7107301-GA-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7107301
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7107300
    reference: chr 17
allele count: 4
allele frequency: 4.264846998613925e-5
allele num: 93790
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000307471
  ensembl transcript: ENST00000302955
  gene symbol: DLG4
  hgvsc: ENST00000302955.6:c.201+25delT
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000407918
  ensembl transcript: ENST00000451807
  gene symbol: DLG4
  hgvsc: ENST00000451807.2:c.309+25delT
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000465789
  ensembl transcript: ENST00000493294
  gene symbol: DLG4
  hgvsc: ENST00000493294.1:c.30+25delT
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000465720
  ensembl transcript: ENST00000486626
  gene symbol: DLG4
  hgvsc: ENST00000486626.3:c.30+25delT
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000460625
  ensembl transcript: ENST00000485100
  gene symbol: DLG4
  hgvsc: ENST00000485100.1:c.201+25delT
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000382428
  ensembl transcript: ENST00000399510
  gene symbol: DLG4
  hgvsc: ENST00000399510.2:c.339+25delT
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000382425
  ensembl transcript: ENST00000399506
  gene symbol: DLG4
  hgvsc: ENST00000399506.2:c.210+25delT
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000388122
  ensembl transcript: ENST00000447163
  gene symbol: DLG4
  hgvsc: ENST00000447163.1:c.300+25delT
  variant of: http://identifiers.org/hgnc/2903
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 675
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3155
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1166
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12643
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14101
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 715
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1211
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14904
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1068
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1262
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2831
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 914
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4354
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 678
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 937
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5000
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2886
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14421
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 739
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17124
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4251
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Other
population: African
population: Latino
population: South Asian
reference allele: GA
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: MQ

17-7107307-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7107307
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7107307
    reference: chr 17
allele count: 1
allele frequency: 1.060108131029365e-5
allele num: 94330
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000465720
  ensembl transcript: ENST00000486626
  gene symbol: DLG4
  hgvsc: ENST00000486626.3:c.30+20G>A
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000382428
  ensembl transcript: ENST00000399510
  gene symbol: DLG4
  hgvsc: ENST00000399510.2:c.339+20G>A
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000307471
  ensembl transcript: ENST00000302955
  gene symbol: DLG4
  hgvsc: ENST00000302955.6:c.201+20G>A
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000382425
  ensembl transcript: ENST00000399506
  gene symbol: DLG4
  hgvsc: ENST00000399506.2:c.210+20G>A
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000460625
  ensembl transcript: ENST00000485100
  gene symbol: DLG4
  hgvsc: ENST00000485100.1:c.201+20G>A
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000388122
  ensembl transcript: ENST00000447163
  gene symbol: DLG4
  hgvsc: ENST00000447163.1:c.300+20G>A
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000465789
  ensembl transcript: ENST00000493294
  gene symbol: DLG4
  hgvsc: ENST00000493294.1:c.30+20G>A
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000407918
  ensembl transcript: ENST00000451807
  gene symbol: DLG4
  hgvsc: ENST00000451807.2:c.309+20G>A
  variant of: http://identifiers.org/hgnc/2903
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1211
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 629
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 914
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1069
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 675
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3552
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13640
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1320
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12367
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15861
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2831
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3752
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1176
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4386
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 531
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 676
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 736
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16944
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 763
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 153
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 522
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: African
population: South Asian
population: Latino
population: European (Finnish)
population: East Asian
reference allele: C
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum

17-7107310-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7107310
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7107310
    reference: chr 17
allele count: 1
allele frequency: 1.053052800067395e-5
allele num: 94962
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000388122
  ensembl transcript: ENST00000447163
  gene symbol: DLG4
  hgvsc: ENST00000447163.1:c.300+17A>G
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000407918
  ensembl transcript: ENST00000451807
  gene symbol: DLG4
  hgvsc: ENST00000451807.2:c.309+17A>G
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000465720
  ensembl transcript: ENST00000486626
  gene symbol: DLG4
  hgvsc: ENST00000486626.3:c.30+17A>G
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000307471
  ensembl transcript: ENST00000302955
  gene symbol: DLG4
  hgvsc: ENST00000302955.6:c.201+17A>G
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000382425
  ensembl transcript: ENST00000399506
  gene symbol: DLG4
  hgvsc: ENST00000399506.2:c.210+17A>G
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000460625
  ensembl transcript: ENST00000485100
  gene symbol: DLG4
  hgvsc: ENST00000485100.1:c.201+17A>G
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000465789
  ensembl transcript: ENST00000493294
  gene symbol: DLG4
  hgvsc: ENST00000493294.1:c.30+17A>G
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000382428
  ensembl transcript: ENST00000399510
  gene symbol: DLG4
  hgvsc: ENST00000399510.2:c.339+17A>G
  variant of: http://identifiers.org/hgnc/2903
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3626
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13151
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2831
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 914
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16683
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1175
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12256
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1210
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3489
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 675
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1071
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1325
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 329
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 204
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16755
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8165
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 543
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 676
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 532
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: Other
population: European (Non-Finnish)
population: Latino
population: South Asian
population: European (Finnish)
reference allele: T
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum

17-7107315-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7107315
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7107315
    reference: chr 17
allele count: 1
allele frequency: 1.047339757017176e-5
allele num: 95480
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000382428
  ensembl transcript: ENST00000399510
  gene symbol: DLG4
  hgvsc: ENST00000399510.2:c.339+12C>T
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000465720
  ensembl transcript: ENST00000486626
  gene symbol: DLG4
  hgvsc: ENST00000486626.3:c.30+12C>T
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000465789
  ensembl transcript: ENST00000493294
  gene symbol: DLG4
  hgvsc: ENST00000493294.1:c.30+12C>T
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000388122
  ensembl transcript: ENST00000447163
  gene symbol: DLG4
  hgvsc: ENST00000447163.1:c.300+12C>T
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000382425
  ensembl transcript: ENST00000399506
  gene symbol: DLG4
  hgvsc: ENST00000399506.2:c.210+12C>T
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000307471
  ensembl transcript: ENST00000302955
  gene symbol: DLG4
  hgvsc: ENST00000302955.6:c.201+12C>T
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000460625
  ensembl transcript: ENST00000485100
  gene symbol: DLG4
  hgvsc: ENST00000485100.1:c.201+12C>T
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000407918
  ensembl transcript: ENST00000451807
  gene symbol: DLG4
  hgvsc: ENST00000451807.2:c.309+12C>T
  variant of: http://identifiers.org/hgnc/2903
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12066
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3204
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2831
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1212
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 543
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1070
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 914
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17727
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1351
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3847
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1177
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12389
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 675
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 185
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3518
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3727
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8167
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 16723
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 572
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 692
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: African
population: Other
population: Latino
population: European (Finnish)
reference allele: G
site quality: QD
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum

17-7107316-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7107316
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7107316
    reference: chr 17
allele count: 1
allele frequency: 1.04606887317461e-5
allele num: 95596
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000465789
  ensembl transcript: ENST00000493294
  gene symbol: DLG4
  hgvsc: ENST00000493294.1:c.30+11T>C
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000382425
  ensembl transcript: ENST00000399506
  gene symbol: DLG4
  hgvsc: ENST00000399506.2:c.210+11T>C
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000465720
  ensembl transcript: ENST00000486626
  gene symbol: DLG4
  hgvsc: ENST00000486626.3:c.30+11T>C
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000407918
  ensembl transcript: ENST00000451807
  gene symbol: DLG4
  hgvsc: ENST00000451807.2:c.309+11T>C
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000307471
  ensembl transcript: ENST00000302955
  gene symbol: DLG4
  hgvsc: ENST00000302955.6:c.201+11T>C
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000382428
  ensembl transcript: ENST00000399510
  gene symbol: DLG4
  hgvsc: ENST00000399510.2:c.339+11T>C
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000388122
  ensembl transcript: ENST00000447163
  gene symbol: DLG4
  hgvsc: ENST00000447163.1:c.300+11T>C
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000460625
  ensembl transcript: ENST00000485100
  gene symbol: DLG4
  hgvsc: ENST00000485100.1:c.201+11T>C
  variant of: http://identifiers.org/hgnc/2903
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1070
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17899
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1179
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12047
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1210
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 675
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3147
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12261
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2831
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3892
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 914
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1347
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3497
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 526
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 661
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1655
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3660
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 760
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8167
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: A
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: QD

17-7107317-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7107317
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7107317
    reference: chr 17
allele count: 1
allele frequency: 1.045806316670153e-5
allele num: 95620
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000382425
  ensembl transcript: ENST00000399506
  gene symbol: DLG4
  hgvsc: ENST00000399506.2:c.210+10C>G
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000407918
  ensembl transcript: ENST00000451807
  gene symbol: DLG4
  hgvsc: ENST00000451807.2:c.309+10C>G
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000465789
  ensembl transcript: ENST00000493294
  gene symbol: DLG4
  hgvsc: ENST00000493294.1:c.30+10C>G
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000307471
  ensembl transcript: ENST00000302955
  gene symbol: DLG4
  hgvsc: ENST00000302955.6:c.201+10C>G
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000382428
  ensembl transcript: ENST00000399510
  gene symbol: DLG4
  hgvsc: ENST00000399510.2:c.339+10C>G
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000388122
  ensembl transcript: ENST00000447163
  gene symbol: DLG4
  hgvsc: ENST00000447163.1:c.300+10C>G
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000460625
  ensembl transcript: ENST00000485100
  gene symbol: DLG4
  hgvsc: ENST00000485100.1:c.201+10C>G
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000465720
  ensembl transcript: ENST00000486626
  gene symbol: DLG4
  hgvsc: ENST00000486626.3:c.30+10C>G
  variant of: http://identifiers.org/hgnc/2903
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 675
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18184
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1070
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 914
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1210
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3956
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3068
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1182
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12048
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1361
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11978
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2831
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3549
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 525
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 893
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16652
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 530
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1688
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 562
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: South Asian
reference allele: G
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: QD
site quality: VQSLOD

17-7107318-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7107318
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7107318
    reference: chr 17
allele count: 1
allele frequency: 1.045325305234989e-5
allele num: 95664
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000382428
  ensembl transcript: ENST00000399510
  gene symbol: DLG4
  hgvsc: ENST00000399510.2:c.339+9G>A
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000465789
  ensembl transcript: ENST00000493294
  gene symbol: DLG4
  hgvsc: ENST00000493294.1:c.30+9G>A
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000407918
  ensembl transcript: ENST00000451807
  gene symbol: DLG4
  hgvsc: ENST00000451807.2:c.309+9G>A
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000460625
  ensembl transcript: ENST00000485100
  gene symbol: DLG4
  hgvsc: ENST00000485100.1:c.201+9G>A
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000465720
  ensembl transcript: ENST00000486626
  gene symbol: DLG4
  hgvsc: ENST00000486626.3:c.30+9G>A
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000388122
  ensembl transcript: ENST00000447163
  gene symbol: DLG4
  hgvsc: ENST00000447163.1:c.300+9G>A
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000382425
  ensembl transcript: ENST00000399506
  gene symbol: DLG4
  hgvsc: ENST00000399506.2:c.210+9G>A
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000307471
  ensembl transcript: ENST00000302955
  gene symbol: DLG4
  hgvsc: ENST00000302955.6:c.201+9G>A
  variant of: http://identifiers.org/hgnc/2903
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12070
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1182
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2831
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17997
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3165
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4022
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 675
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 914
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1210
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11970
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1367
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1071
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1663
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 184
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17990
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 551
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 555
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1050
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8168
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 540
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: African
population: Latino
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS

17-7107345-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7107345
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7107345
    reference: chr 17
allele count: 1
allele frequency: 1.037818091244967e-5
allele num: 96356
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000382428
  ensembl transcript: ENST00000399510
  gene symbol: DLG4
  hgvsc: ENST00000399510.2:c.321G>A
  hgvsp: ENST00000399510.2:c.321G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000382425
  ensembl transcript: ENST00000399506
  gene symbol: DLG4
  hgvsc: ENST00000399506.2:c.192G>A
  hgvsp: ENST00000399506.2:c.192G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000388122
  ensembl transcript: ENST00000447163
  gene symbol: DLG4
  hgvsc: ENST00000447163.1:c.282G>A
  hgvsp: ENST00000447163.1:c.282G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000460625
  ensembl transcript: ENST00000485100
  gene symbol: DLG4
  hgvsc: ENST00000485100.1:c.183G>A
  hgvsp: ENST00000485100.1:c.183G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000465720
  ensembl transcript: ENST00000486626
  gene symbol: DLG4
  hgvsc: ENST00000486626.3:c.12G>A
  hgvsp: ENST00000486626.3:c.12G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000307471
  ensembl transcript: ENST00000302955
  gene symbol: DLG4
  hgvsc: ENST00000302955.6:c.183G>A
  hgvsp: ENST00000302955.6:c.183G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000465789
  ensembl transcript: ENST00000493294
  gene symbol: DLG4
  hgvsc: ENST00000493294.1:c.12G>A
  hgvsp: ENST00000493294.1:c.12G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000407918
  ensembl transcript: ENST00000451807
  gene symbol: DLG4
  hgvsc: ENST00000451807.2:c.291G>A
  hgvsp: ENST00000451807.2:c.291G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2903
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4858
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11639
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 675
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1431
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1182
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1210
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1071
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17378
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11981
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 914
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3319
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2831
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 660
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 576
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 526
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 194
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3261
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 745
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Glu107Glu
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: Latino
population: East Asian
population: South Asian
population: African
reference allele: C
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff

17-7107348-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7107348
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7107348
    reference: chr 17
allele count: 1
allele frequency: 1.040820999604488e-5
allele num: 96078
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000407918
  ensembl transcript: ENST00000451807
  gene symbol: DLG4
  hgvsc: ENST00000451807.2:c.288C>T
  hgvsp: ENST00000451807.2:c.288C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000465789
  ensembl transcript: ENST00000493294
  gene symbol: DLG4
  hgvsc: ENST00000493294.1:c.9C>T
  hgvsp: ENST00000493294.1:c.9C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000460625
  ensembl transcript: ENST00000485100
  gene symbol: DLG4
  hgvsc: ENST00000485100.1:c.180C>T
  hgvsp: ENST00000485100.1:c.180C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000465720
  ensembl transcript: ENST00000486626
  gene symbol: DLG4
  hgvsc: ENST00000486626.3:c.9C>T
  hgvsp: ENST00000486626.3:c.9C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000382428
  ensembl transcript: ENST00000399510
  gene symbol: DLG4
  hgvsc: ENST00000399510.2:c.318C>T
  hgvsp: ENST00000399510.2:c.318C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000382425
  ensembl transcript: ENST00000399506
  gene symbol: DLG4
  hgvsc: ENST00000399506.2:c.189C>T
  hgvsp: ENST00000399506.2:c.189C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000388122
  ensembl transcript: ENST00000447163
  gene symbol: DLG4
  hgvsc: ENST00000447163.1:c.279C>T
  hgvsp: ENST00000447163.1:c.279C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000307471
  ensembl transcript: ENST00000302955
  gene symbol: DLG4
  hgvsc: ENST00000302955.6:c.180C>T
  hgvsp: ENST00000302955.6:c.180C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2903
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2831
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 499
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3445
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16902
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11670
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 914
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1184
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1071
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4923
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 675
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1455
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12198
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1210
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3526
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 560
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 524
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1570
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 326
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17388
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Tyr106Tyr
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Finnish)
population: South Asian
population: African
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: DP

17-7107363-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7107363
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7107363
    reference: chr 17
allele count: 0
allele frequency: 0.0e0
allele num: 93832
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000382428
  ensembl transcript: ENST00000399510
  gene symbol: DLG4
  hgvsc: ENST00000399510.2:c.303G>A
  hgvsp: ENST00000399510.2:c.303G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000382425
  ensembl transcript: ENST00000399506
  gene symbol: DLG4
  hgvsc: ENST00000399506.2:c.174G>A
  hgvsp: ENST00000399506.2:c.174G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000388122
  ensembl transcript: ENST00000447163
  gene symbol: DLG4
  hgvsc: ENST00000447163.1:c.264G>A
  hgvsp: ENST00000447163.1:c.264G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000307471
  ensembl transcript: ENST00000302955
  gene symbol: DLG4
  hgvsc: ENST00000302955.6:c.165G>A
  hgvsp: ENST00000302955.6:c.165G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000460625
  ensembl transcript: ENST00000485100
  gene symbol: DLG4
  hgvsc: ENST00000485100.1:c.165G>A
  hgvsp: ENST00000485100.1:c.165G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000465789
  ensembl transcript: ENST00000493294
  gene symbol: DLG4
  hgvsc: ENST00000493294.1:c.-7G>A
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000407918
  ensembl transcript: ENST00000451807
  gene symbol: DLG4
  hgvsc: ENST00000451807.2:c.273G>A
  hgvsp: ENST00000451807.2:c.273G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000465720
  ensembl transcript: ENST00000486626
  gene symbol: DLG4
  hgvsc: ENST00000486626.3:c.-7G>A
  variant of: http://identifiers.org/hgnc/2903
canonical: true
consequence: synonymous
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 1211
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2831
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 675
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4761
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14859
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11681
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 679
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5105
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12550
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1426
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 914
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1184
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1071
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 251
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1301
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19120
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 875
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 774
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 325
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Glu101Glu
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
population: Other
population: South Asian
population: European (Finnish)
reference allele: C
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ

17-7107366-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7107366
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7107366
    reference: chr 17
allele count: 2
allele frequency: 2.146106961970985e-5
allele num: 93192
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000465720
  ensembl transcript: ENST00000486626
  gene symbol: DLG4
  hgvsc: ENST00000486626.3:c.-10C>T
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000388122
  ensembl transcript: ENST00000447163
  gene symbol: DLG4
  hgvsc: ENST00000447163.1:c.261C>T
  hgvsp: ENST00000447163.1:c.261C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000407918
  ensembl transcript: ENST00000451807
  gene symbol: DLG4
  hgvsc: ENST00000451807.2:c.270C>T
  hgvsp: ENST00000451807.2:c.270C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000460625
  ensembl transcript: ENST00000485100
  gene symbol: DLG4
  hgvsc: ENST00000485100.1:c.162C>T
  hgvsp: ENST00000485100.1:c.162C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000465789
  ensembl transcript: ENST00000493294
  gene symbol: DLG4
  hgvsc: ENST00000493294.1:c.-10C>T
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000382425
  ensembl transcript: ENST00000399506
  gene symbol: DLG4
  hgvsc: ENST00000399506.2:c.171C>T
  hgvsp: ENST00000399506.2:c.171C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000307471
  ensembl transcript: ENST00000302955
  gene symbol: DLG4
  hgvsc: ENST00000302955.6:c.162C>T
  hgvsp: ENST00000302955.6:c.162C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000382428
  ensembl transcript: ENST00000399510
  gene symbol: DLG4
  hgvsc: ENST00000399510.2:c.300C>T
  hgvsp: ENST00000399510.2:c.300C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2903
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 675
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5086
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1352
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1208
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15057
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 914
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4329
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12757
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 720
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11766
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2836
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1174
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1072
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1105
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2309
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 718
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 419
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4333
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 512
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12450
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Thr100Thr
num of homozygotes: 0
population: African
population: East Asian
population: South Asian
population: Latino
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum

17-7107366-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7107366
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7107366
    reference: chr 17
allele count: 18
allele frequency: 1.931496265773886e-4
allele num: 93192
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000407918
  ensembl transcript: ENST00000451807
  gene symbol: DLG4
  hgvsc: ENST00000451807.2:c.270C>G
  hgvsp: ENST00000451807.2:c.270C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000460625
  ensembl transcript: ENST00000485100
  gene symbol: DLG4
  hgvsc: ENST00000485100.1:c.162C>G
  hgvsp: ENST00000485100.1:c.162C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000382428
  ensembl transcript: ENST00000399510
  gene symbol: DLG4
  hgvsc: ENST00000399510.2:c.300C>G
  hgvsp: ENST00000399510.2:c.300C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000307471
  ensembl transcript: ENST00000302955
  gene symbol: DLG4
  hgvsc: ENST00000302955.6:c.162C>G
  hgvsp: ENST00000302955.6:c.162C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000465720
  ensembl transcript: ENST00000486626
  gene symbol: DLG4
  hgvsc: ENST00000486626.3:c.-10C>G
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000388122
  ensembl transcript: ENST00000447163
  gene symbol: DLG4
  hgvsc: ENST00000447163.1:c.261C>G
  hgvsp: ENST00000447163.1:c.261C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000465789
  ensembl transcript: ENST00000493294
  gene symbol: DLG4
  hgvsc: ENST00000493294.1:c.-10C>G
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000382425
  ensembl transcript: ENST00000399506
  gene symbol: DLG4
  hgvsc: ENST00000399506.2:c.171C>G
  hgvsp: ENST00000399506.2:c.171C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/2903
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12757
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 720
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 675
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1352
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5086
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1174
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 914
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4329
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11766
  bin: 2.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 15057
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1208
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2836
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1072
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 7.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 859
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 518
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4363
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 324
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 826
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1105
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 515
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Thr100Thr
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: African
population: Other
population: European (Non-Finnish)
population: South Asian
population: Latino
reference allele: G
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff

17-7107367-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7107367
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7107367
    reference: chr 17
allele count: 64
allele frequency: 6.864448591715469e-4
allele num: 93234
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000465789
  ensembl transcript: ENST00000493294
  gene symbol: DLG4
  hgvsc: ENST00000493294.1:c.-11C>T
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000382425
  ensembl transcript: ENST00000399506
  gene symbol: DLG4
  hgvsc: ENST00000399506.2:c.170C>T
  hgvsp: ENSP00000382425.2:p.Thr57Ile
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000465720
  ensembl transcript: ENST00000486626
  gene symbol: DLG4
  hgvsc: ENST00000486626.3:c.-11C>T
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000307471
  ensembl transcript: ENST00000302955
  gene symbol: DLG4
  hgvsc: ENST00000302955.6:c.161C>T
  hgvsp: ENSP00000307471.6:p.Thr54Ile
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000407918
  ensembl transcript: ENST00000451807
  gene symbol: DLG4
  hgvsc: ENST00000451807.2:c.269C>T
  hgvsp: ENSP00000407918.2:p.Thr90Ile
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000460625
  ensembl transcript: ENST00000485100
  gene symbol: DLG4
  hgvsc: ENST00000485100.1:c.161C>T
  hgvsp: ENSP00000460625.1:p.Thr54Ile
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000388122
  ensembl transcript: ENST00000447163
  gene symbol: DLG4
  hgvsc: ENST00000447163.1:c.260C>T
  hgvsp: ENSP00000388122.1:p.Thr87Ile
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000382428
  ensembl transcript: ENST00000399510
  gene symbol: DLG4
  hgvsc: ENST00000399510.2:c.299C>T
  hgvsp: ENSP00000382428.2:p.Thr100Ile
  variant of: http://identifiers.org/hgnc/2903
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2833
  bin: 9.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 1208
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 916
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1345
  bin: 3.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1070
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 676
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 737
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1177
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4216
  bin: 2.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 12811
  bin: 7.5e0
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 5025
  bin: 1.75e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11829
  bin: 2.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15107
  bin: 1.25e1
  variant carriers: 12
genotype quality: GenotypeQuality
  all individuals: 2297
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 516
  bin: 8.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 8220
  bin: 9.75e1
  variant carriers: 63
genotype quality: GenotypeQuality
  all individuals: 833
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12576
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4333
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 140
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Thr100Ile
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: East Asian
population: South Asian
population: African
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: QD

17-7107383-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7107383
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7107383
    reference: chr 17
allele count: 1
allele frequency: 1.092943953834047e-5
allele num: 91496
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000382428
  ensembl transcript: ENST00000399510
  gene symbol: DLG4
  hgvsc: ENST00000399510.2:c.283T>C
  hgvsp: ENST00000399510.2:c.283T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000460625
  ensembl transcript: ENST00000485100
  gene symbol: DLG4
  hgvsc: ENST00000485100.1:c.151-6T>C
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000465789
  ensembl transcript: ENST00000493294
  gene symbol: DLG4
  hgvsc: ENST00000493294.1:c.-21-6T>C
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000388122
  ensembl transcript: ENST00000447163
  gene symbol: DLG4
  hgvsc: ENST00000447163.1:c.250-6T>C
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000307471
  ensembl transcript: ENST00000302955
  gene symbol: DLG4
  hgvsc: ENST00000302955.6:c.151-6T>C
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000382425
  ensembl transcript: ENST00000399506
  gene symbol: DLG4
  hgvsc: ENST00000399506.2:c.154T>C
  hgvsp: ENST00000399506.2:c.154T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000407918
  ensembl transcript: ENST00000451807
  gene symbol: DLG4
  hgvsc: ENST00000451807.2:c.253T>C
  hgvsp: ENST00000451807.2:c.253T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000465720
  ensembl transcript: ENST00000486626
  gene symbol: DLG4
  hgvsc: ENST00000486626.3:c.-27T>C
  variant of: http://identifiers.org/hgnc/2903
canonical: false
consequence: splice region
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 1069
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1177
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5029
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1207
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1284
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 911
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13589
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17268
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3492
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9504
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 676
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 916
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2831
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 366
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 516
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 684
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 324
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2391
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10621
  bin: 6.25e1
  variant carriers: 0
hgvs: c.250-6T>C
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Latino
population: East Asian
population: South Asian
reference allele: A
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum

http://identifiers.org/exac.variant/17-7107391-AC-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7107391
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7107390
    reference: chr 17
allele count: 1
allele frequency: 1.107125459457066e-5
allele num: 90324
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000465789
  ensembl transcript: ENST00000493294
  gene symbol: DLG4
  hgvsc: ENST00000493294.1:c.-21-15delG
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000465720
  ensembl transcript: ENST00000486626
  gene symbol: DLG4
  hgvsc: ENST00000486626.3:c.-30-6delG
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000388122
  ensembl transcript: ENST00000447163
  gene symbol: DLG4
  hgvsc: ENST00000447163.1:c.250-15delG
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000382428
  ensembl transcript: ENST00000399510
  gene symbol: DLG4
  hgvsc: ENST00000399510.2:c.280-6delG
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000460625
  ensembl transcript: ENST00000485100
  gene symbol: DLG4
  hgvsc: ENST00000485100.1:c.151-15delG
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000382425
  ensembl transcript: ENST00000399506
  gene symbol: DLG4
  hgvsc: ENST00000399506.2:c.151-6delG
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000407918
  ensembl transcript: ENST00000451807
  gene symbol: DLG4
  hgvsc: ENST00000451807.2:c.250-6delG
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000307471
  ensembl transcript: ENST00000302955
  gene symbol: DLG4
  hgvsc: ENST00000302955.6:c.151-15delG
  variant of: http://identifiers.org/hgnc/2903
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1180
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1268
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1207
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13946
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1079
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7864
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5548
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1070
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 676
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18256
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3118
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 916
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2831
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 769
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 585
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 517
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 812
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1192
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21441
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5434
  bin: 3.25e1
  variant carriers: 0
hgvs: c.280-6delG
num of homozygotes: 0
population: European (Finnish)
population: Other
population: African
population: Latino
population: East Asian
population: South Asian
population: European (Non-Finnish)
reference allele: AC
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: FS

17-7107392-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7107392
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7107392
    reference: chr 17
allele count: 2
allele frequency: 2.22197533607377e-5
allele num: 90010
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000307471
  ensembl transcript: ENST00000302955
  gene symbol: DLG4
  hgvsc: ENST00000302955.6:c.151-15G>A
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000465720
  ensembl transcript: ENST00000486626
  gene symbol: DLG4
  hgvsc: ENST00000486626.3:c.-30-6G>A
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000407918
  ensembl transcript: ENST00000451807
  gene symbol: DLG4
  hgvsc: ENST00000451807.2:c.250-6G>A
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000382425
  ensembl transcript: ENST00000399506
  gene symbol: DLG4
  hgvsc: ENST00000399506.2:c.151-6G>A
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000382428
  ensembl transcript: ENST00000399510
  gene symbol: DLG4
  hgvsc: ENST00000399510.2:c.280-6G>A
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000460625
  ensembl transcript: ENST00000485100
  gene symbol: DLG4
  hgvsc: ENST00000485100.1:c.151-15G>A
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000465789
  ensembl transcript: ENST00000493294
  gene symbol: DLG4
  hgvsc: ENST00000493294.1:c.-21-15G>A
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000388122
  ensembl transcript: ENST00000447163
  gene symbol: DLG4
  hgvsc: ENST00000447163.1:c.250-15G>A
  variant of: http://identifiers.org/hgnc/2903
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7930
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18232
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1182
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2831
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 916
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1207
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5505
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1078
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3115
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 676
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13943
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1070
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1275
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1025
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 324
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1231
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2615
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 952
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 600
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 602
  bin: 7.75e1
  variant carriers: 0
hgvs: c.280-6G>A
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: C
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: MQ

17-7107393-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7107393
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7107393
    reference: chr 17
allele count: 2
allele frequency: 2.232441844889941e-5
allele num: 89588
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000465720
  ensembl transcript: ENST00000486626
  gene symbol: DLG4
  hgvsc: ENST00000486626.3:c.-30-7C>T
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000382425
  ensembl transcript: ENST00000399506
  gene symbol: DLG4
  hgvsc: ENST00000399506.2:c.151-7C>T
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000460625
  ensembl transcript: ENST00000485100
  gene symbol: DLG4
  hgvsc: ENST00000485100.1:c.151-16C>T
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000465789
  ensembl transcript: ENST00000493294
  gene symbol: DLG4
  hgvsc: ENST00000493294.1:c.-21-16C>T
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000382428
  ensembl transcript: ENST00000399510
  gene symbol: DLG4
  hgvsc: ENST00000399510.2:c.280-7C>T
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000407918
  ensembl transcript: ENST00000451807
  gene symbol: DLG4
  hgvsc: ENST00000451807.2:c.250-7C>T
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000307471
  ensembl transcript: ENST00000302955
  gene symbol: DLG4
  hgvsc: ENST00000302955.6:c.151-16C>T
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000388122
  ensembl transcript: ENST00000447163
  gene symbol: DLG4
  hgvsc: ENST00000447163.1:c.250-16C>T
  variant of: http://identifiers.org/hgnc/2903
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5528
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18290
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1086
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1279
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3070
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 438
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1185
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1070
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7823
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13999
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 676
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1208
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 916
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2832
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 624
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 316
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8170
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 596
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21587
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 520
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 293
  bin: 5.75e1
  variant carriers: 0
hgvs: c.280-7C>T
num of homozygotes: 0
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Other
reference allele: G
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum

http://identifiers.org/exac.variant/17-7107466-A-AC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7107466
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7107467
    reference: chr 17
allele count: 1
allele frequency: 1.066098081023454e-5
allele num: 93800
alternate allele: AC
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000307471
  ensembl transcript: ENST00000302955
  gene symbol: DLG4
  hgvsc: ENST00000302955.6:c.150+51dupG
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000382425
  ensembl transcript: ENST00000399506
  gene symbol: DLG4
  hgvsc: ENST00000399506.2:c.150+51dupG
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000460625
  ensembl transcript: ENST00000485100
  gene symbol: DLG4
  hgvsc: ENST00000485100.1:c.150+51dupG
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000407918
  ensembl transcript: ENST00000451807
  gene symbol: DLG4
  hgvsc: ENST00000451807.2:c.249+51dupG
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000382428
  ensembl transcript: ENST00000399510
  gene symbol: DLG4
  hgvsc: ENST00000399510.2:c.279+51dupG
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000465789
  ensembl transcript: ENST00000493294
  gene symbol: DLG4
  hgvsc: ENST00000493294.1:c.-22+51dupG
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000465720
  ensembl transcript: ENST00000486626
  gene symbol: DLG4
  hgvsc: ENST00000486626.3:c.-31+51dupG
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000388122
  ensembl transcript: ENST00000447163
  gene symbol: DLG4
  hgvsc: ENST00000447163.1:c.249+51dupG
  variant of: http://identifiers.org/hgnc/2903
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 18847
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1245
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11351
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4914
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1818
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1154
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11396
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6428
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 704
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3765
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2539
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5348
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1205
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12151
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1238
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 577
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5979
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: African
population: European (Finnish)
reference allele: A
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: ClippingRankSum

17-7107468-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7107468
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7107468
    reference: chr 17
allele count: 1
allele frequency: 1.060895395713983e-5
allele num: 94260
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000460625
  ensembl transcript: ENST00000485100
  gene symbol: DLG4
  hgvsc: ENST00000485100.1:c.150+50A>G
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000388122
  ensembl transcript: ENST00000447163
  gene symbol: DLG4
  hgvsc: ENST00000447163.1:c.249+50A>G
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000307471
  ensembl transcript: ENST00000302955
  gene symbol: DLG4
  hgvsc: ENST00000302955.6:c.150+50A>G
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000382428
  ensembl transcript: ENST00000399510
  gene symbol: DLG4
  hgvsc: ENST00000399510.2:c.279+50A>G
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000465789
  ensembl transcript: ENST00000493294
  gene symbol: DLG4
  hgvsc: ENST00000493294.1:c.-22+50A>G
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000407918
  ensembl transcript: ENST00000451807
  gene symbol: DLG4
  hgvsc: ENST00000451807.2:c.249+50A>G
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000465720
  ensembl transcript: ENST00000486626
  gene symbol: DLG4
  hgvsc: ENST00000486626.3:c.-31+50A>G
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000382425
  ensembl transcript: ENST00000399506
  gene symbol: DLG4
  hgvsc: ENST00000399506.2:c.150+50A>G
  variant of: http://identifiers.org/hgnc/2903
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1764
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11310
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 679
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6617
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4759
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1245
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1160
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18838
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11486
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1819
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1786
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5454
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 178
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7822
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 640
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1067
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12643
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: South Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
reference allele: T
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: MQ

17-7107470-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7107470
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7107470
    reference: chr 17
allele count: 2
allele frequency: 2.123593119558293e-5
allele num: 94180
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000465789
  ensembl transcript: ENST00000493294
  gene symbol: DLG4
  hgvsc: ENST00000493294.1:c.-22+48G>C
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000407918
  ensembl transcript: ENST00000451807
  gene symbol: DLG4
  hgvsc: ENST00000451807.2:c.249+48G>C
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000460625
  ensembl transcript: ENST00000485100
  gene symbol: DLG4
  hgvsc: ENST00000485100.1:c.150+48G>C
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000465720
  ensembl transcript: ENST00000486626
  gene symbol: DLG4
  hgvsc: ENST00000486626.3:c.-31+48G>C
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000307471
  ensembl transcript: ENST00000302955
  gene symbol: DLG4
  hgvsc: ENST00000302955.6:c.150+48G>C
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000382425
  ensembl transcript: ENST00000399506
  gene symbol: DLG4
  hgvsc: ENST00000399506.2:c.150+48G>C
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000388122
  ensembl transcript: ENST00000447163
  gene symbol: DLG4
  hgvsc: ENST00000447163.1:c.249+48G>C
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000382428
  ensembl transcript: ENST00000399510
  gene symbol: DLG4
  hgvsc: ENST00000399510.2:c.279+48G>C
  variant of: http://identifiers.org/hgnc/2903
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1741
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4773
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6897
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11036
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1157
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1245
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 668
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11532
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18816
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 7791
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3083
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3765
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2468
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 178
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1466
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13167
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 394
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: East Asian
population: Latino
population: African
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: MQRankSum

17-7107471-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7107471
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7107471
    reference: chr 17
allele count: 1
allele frequency: 1.065961710655353e-5
allele num: 93812
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000382425
  ensembl transcript: ENST00000399506
  gene symbol: DLG4
  hgvsc: ENST00000399506.2:c.150+47G>A
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000307471
  ensembl transcript: ENST00000302955
  gene symbol: DLG4
  hgvsc: ENST00000302955.6:c.150+47G>A
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000407918
  ensembl transcript: ENST00000451807
  gene symbol: DLG4
  hgvsc: ENST00000451807.2:c.249+47G>A
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000388122
  ensembl transcript: ENST00000447163
  gene symbol: DLG4
  hgvsc: ENST00000447163.1:c.249+47G>A
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000465789
  ensembl transcript: ENST00000493294
  gene symbol: DLG4
  hgvsc: ENST00000493294.1:c.-22+47G>A
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000382428
  ensembl transcript: ENST00000399510
  gene symbol: DLG4
  hgvsc: ENST00000399510.2:c.279+47G>A
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000465720
  ensembl transcript: ENST00000486626
  gene symbol: DLG4
  hgvsc: ENST00000486626.3:c.-31+47G>A
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000460625
  ensembl transcript: ENST00000485100
  gene symbol: DLG4
  hgvsc: ENST00000485100.1:c.150+47G>A
  variant of: http://identifiers.org/hgnc/2903
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1245
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1694
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11637
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 664
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1160
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6872
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4591
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18869
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11133
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1685
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3764
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 727
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6030
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1227
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13009
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 258
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 377
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Latino
population: African
population: Other
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum

http://identifiers.org/exac.variant/17-7107490-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7107490
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7107490
    reference: chr 17
allele count: 2
allele frequency: 2.12273663206606e-5
allele num: 94218
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000307471
  ensembl transcript: ENST00000302955
  gene symbol: DLG4
  hgvsc: ENST00000302955.6:c.150+28G>T
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000382425
  ensembl transcript: ENST00000399506
  gene symbol: DLG4
  hgvsc: ENST00000399506.2:c.150+28G>T
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000465720
  ensembl transcript: ENST00000486626
  gene symbol: DLG4
  hgvsc: ENST00000486626.3:c.-31+28G>T
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000388122
  ensembl transcript: ENST00000447163
  gene symbol: DLG4
  hgvsc: ENST00000447163.1:c.249+28G>T
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000465789
  ensembl transcript: ENST00000493294
  gene symbol: DLG4
  hgvsc: ENST00000493294.1:c.-22+28G>T
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000460625
  ensembl transcript: ENST00000485100
  gene symbol: DLG4
  hgvsc: ENST00000485100.1:c.150+28G>T
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000382428
  ensembl transcript: ENST00000399510
  gene symbol: DLG4
  hgvsc: ENST00000399510.2:c.279+28G>T
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000407918
  ensembl transcript: ENST00000451807
  gene symbol: DLG4
  hgvsc: ENST00000451807.2:c.249+28G>T
  variant of: http://identifiers.org/hgnc/2903
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4283
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11924
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 625
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 710
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7850
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1357
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18002
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1245
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11866
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 551
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5142
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5311
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 564
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7368
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1826
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1568
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 871
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: Other
population: East Asian
population: African
reference allele: C
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum

17-7107492-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7107492
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7107492
    reference: chr 17
allele count: 1
allele frequency: 1.056926036315979e-5
allele num: 94614
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000388122
  ensembl transcript: ENST00000447163
  gene symbol: DLG4
  hgvsc: ENST00000447163.1:c.249+26G>A
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000465789
  ensembl transcript: ENST00000493294
  gene symbol: DLG4
  hgvsc: ENST00000493294.1:c.-22+26G>A
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000307471
  ensembl transcript: ENST00000302955
  gene symbol: DLG4
  hgvsc: ENST00000302955.6:c.150+26G>A
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000407918
  ensembl transcript: ENST00000451807
  gene symbol: DLG4
  hgvsc: ENST00000451807.2:c.249+26G>A
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000460625
  ensembl transcript: ENST00000485100
  gene symbol: DLG4
  hgvsc: ENST00000485100.1:c.150+26G>A
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000382425
  ensembl transcript: ENST00000399506
  gene symbol: DLG4
  hgvsc: ENST00000399506.2:c.150+26G>A
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000465720
  ensembl transcript: ENST00000486626
  gene symbol: DLG4
  hgvsc: ENST00000486626.3:c.-31+26G>A
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000382428
  ensembl transcript: ENST00000399510
  gene symbol: DLG4
  hgvsc: ENST00000399510.2:c.279+26G>A
  variant of: http://identifiers.org/hgnc/2903
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1337
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12952
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 656
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11896
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 625
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17499
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4399
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7256
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1245
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 992
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 561
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3763
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1638
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 489
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 174
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 794
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5160
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: C
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/17-7107500-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7107500
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7107500
    reference: chr 17
allele count: 2
allele frequency: 2.082422273588638e-5
allele num: 96042
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000382425
  ensembl transcript: ENST00000399506
  gene symbol: DLG4
  hgvsc: ENST00000399506.2:c.150+18T>G
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000465720
  ensembl transcript: ENST00000486626
  gene symbol: DLG4
  hgvsc: ENST00000486626.3:c.-31+18T>G
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000307471
  ensembl transcript: ENST00000302955
  gene symbol: DLG4
  hgvsc: ENST00000302955.6:c.150+18T>G
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000388122
  ensembl transcript: ENST00000447163
  gene symbol: DLG4
  hgvsc: ENST00000447163.1:c.249+18T>G
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000460625
  ensembl transcript: ENST00000485100
  gene symbol: DLG4
  hgvsc: ENST00000485100.1:c.150+18T>G
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000465789
  ensembl transcript: ENST00000493294
  gene symbol: DLG4
  hgvsc: ENST00000493294.1:c.-22+18T>G
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000382428
  ensembl transcript: ENST00000399510
  gene symbol: DLG4
  hgvsc: ENST00000399510.2:c.279+18T>G
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000407918
  ensembl transcript: ENST00000451807
  gene symbol: DLG4
  hgvsc: ENST00000451807.2:c.249+18T>G
  variant of: http://identifiers.org/hgnc/2903
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1245
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5189
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4945
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 616
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1393
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 422
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11418
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 422
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14668
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17980
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 572
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3762
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1104
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 255
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 374
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 509
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1824
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14964
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: East Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: A
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQ

17-7107507-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7107507
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7107507
    reference: chr 17
allele count: 1
allele frequency: 1.016466761536898e-5
allele num: 98380
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000407918
  ensembl transcript: ENST00000451807
  gene symbol: DLG4
  hgvsc: ENST00000451807.2:c.249+11T>C
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000382425
  ensembl transcript: ENST00000399506
  gene symbol: DLG4
  hgvsc: ENST00000399506.2:c.150+11T>C
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000388122
  ensembl transcript: ENST00000447163
  gene symbol: DLG4
  hgvsc: ENST00000447163.1:c.249+11T>C
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000465720
  ensembl transcript: ENST00000486626
  gene symbol: DLG4
  hgvsc: ENST00000486626.3:c.-31+11T>C
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000465789
  ensembl transcript: ENST00000493294
  gene symbol: DLG4
  hgvsc: ENST00000493294.1:c.-22+11T>C
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000382428
  ensembl transcript: ENST00000399510
  gene symbol: DLG4
  hgvsc: ENST00000399510.2:c.279+11T>C
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000460625
  ensembl transcript: ENST00000485100
  gene symbol: DLG4
  hgvsc: ENST00000485100.1:c.150+11T>C
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000307471
  ensembl transcript: ENST00000302955
  gene symbol: DLG4
  hgvsc: ENST00000302955.6:c.150+11T>C
  variant of: http://identifiers.org/hgnc/2903
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1371
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3638
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5388
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11890
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22803
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10641
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1245
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 536
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3612
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 420
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 913
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 773
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 220
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 172
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
population: Other
population: South Asian
population: European (Finnish)
reference allele: A
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: QD

17-7107519-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7107519
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7107519
    reference: chr 17
allele count: 2
allele frequency: 1.954919555060309e-5
allele num: 102306
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000407918
  ensembl transcript: ENST00000451807
  gene symbol: DLG4
  hgvsc: ENST00000451807.2:c.248A>T
  hgvsp: ENSP00000407918.2:p.Tyr83Phe
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000307471
  ensembl transcript: ENST00000302955
  gene symbol: DLG4
  hgvsc: ENST00000302955.6:c.149A>T
  hgvsp: ENSP00000307471.6:p.Tyr50Phe
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000465789
  ensembl transcript: ENST00000493294
  gene symbol: DLG4
  hgvsc: ENST00000493294.1:c.-23A>T
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000388122
  ensembl transcript: ENST00000447163
  gene symbol: DLG4
  hgvsc: ENST00000447163.1:c.248A>T
  hgvsp: ENSP00000388122.1:p.Tyr83Phe
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000382425
  ensembl transcript: ENST00000399506
  gene symbol: DLG4
  hgvsc: ENST00000399506.2:c.149A>T
  hgvsp: ENSP00000382425.2:p.Tyr50Phe
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000465720
  ensembl transcript: ENST00000486626
  gene symbol: DLG4
  hgvsc: ENST00000486626.3:c.-32A>T
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000460625
  ensembl transcript: ENST00000485100
  gene symbol: DLG4
  hgvsc: ENST00000485100.1:c.149A>T
  hgvsp: ENSP00000460625.1:p.Tyr50Phe
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000382428
  ensembl transcript: ENST00000399510
  gene symbol: DLG4
  hgvsc: ENST00000399510.2:c.278A>T
  hgvsp: ENSP00000382428.2:p.Tyr93Phe
  variant of: http://identifiers.org/hgnc/2903
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1414
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6462
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2458
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 607
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8900
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28339
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8238
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1245
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1498
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 530
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 401
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2452
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Tyr93Phe
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Latino
population: Other
reference allele: T
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP

17-7107522-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7107522
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7107522
    reference: chr 17
allele count: 1
allele frequency: 9.67997986564188e-6
allele num: 103306
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000407918
  ensembl transcript: ENST00000451807
  gene symbol: DLG4
  hgvsc: ENST00000451807.2:c.245G>A
  hgvsp: ENSP00000407918.2:p.Gly82Glu
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000465720
  ensembl transcript: ENST00000486626
  gene symbol: DLG4
  hgvsc: ENST00000486626.3:c.-35G>A
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000388122
  ensembl transcript: ENST00000447163
  gene symbol: DLG4
  hgvsc: ENST00000447163.1:c.245G>A
  hgvsp: ENSP00000388122.1:p.Gly82Glu
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000307471
  ensembl transcript: ENST00000302955
  gene symbol: DLG4
  hgvsc: ENST00000302955.6:c.146G>A
  hgvsp: ENSP00000307471.6:p.Gly49Glu
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000465789
  ensembl transcript: ENST00000493294
  gene symbol: DLG4
  hgvsc: ENST00000493294.1:c.-26G>A
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000460625
  ensembl transcript: ENST00000485100
  gene symbol: DLG4
  hgvsc: ENST00000485100.1:c.146G>A
  hgvsp: ENSP00000460625.1:p.Gly49Glu
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000382425
  ensembl transcript: ENST00000399506
  gene symbol: DLG4
  hgvsc: ENST00000399506.2:c.146G>A
  hgvsp: ENSP00000382425.2:p.Gly49Glu
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000382428
  ensembl transcript: ENST00000399510
  gene symbol: DLG4
  hgvsc: ENST00000399510.2:c.275G>A
  hgvsp: ENSP00000382428.2:p.Gly92Glu
  variant of: http://identifiers.org/hgnc/2903
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2217
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1245
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8381
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7489
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6653
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1446
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 609
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29619
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31786
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 591
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2275
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1316
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1036
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 504
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 405
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Gly92Glu
num of homozygotes: 0
population: Latino
population: Other
population: African
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: European (Finnish)
reference allele: C
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum

17-7107536-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7107536
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7107536
    reference: chr 17
allele count: 3
allele frequency: 2.783964365256125e-5
allele num: 107760
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000382428
  ensembl transcript: ENST00000399510
  gene symbol: DLG4
  hgvsc: ENST00000399510.2:c.261C>T
  hgvsp: ENST00000399510.2:c.261C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000307471
  ensembl transcript: ENST00000302955
  gene symbol: DLG4
  hgvsc: ENST00000302955.6:c.132C>T
  hgvsp: ENST00000302955.6:c.132C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000465720
  ensembl transcript: ENST00000486626
  gene symbol: DLG4
  hgvsc: ENST00000486626.3:c.-49C>T
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000388122
  ensembl transcript: ENST00000447163
  gene symbol: DLG4
  hgvsc: ENST00000447163.1:c.231C>T
  hgvsp: ENST00000447163.1:c.231C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000460625
  ensembl transcript: ENST00000485100
  gene symbol: DLG4
  hgvsc: ENST00000485100.1:c.132C>T
  hgvsp: ENST00000485100.1:c.132C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000407918
  ensembl transcript: ENST00000451807
  gene symbol: DLG4
  hgvsc: ENST00000451807.2:c.231C>T
  hgvsp: ENST00000451807.2:c.231C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000382425
  ensembl transcript: ENST00000399506
  gene symbol: DLG4
  hgvsc: ENST00000399506.2:c.132C>T
  hgvsp: ENST00000399506.2:c.132C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000465789
  ensembl transcript: ENST00000493294
  gene symbol: DLG4
  hgvsc: ENST00000493294.1:c.-40C>T
  variant of: http://identifiers.org/hgnc/2903
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34113
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6228
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1536
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4779
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1245
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1296
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7850
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1265
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 680
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 636
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2651
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 173
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Thr87Thr
num of homozygotes: 0
population: Other
population: European (Finnish)
population: East Asian
population: African
population: South Asian
population: European (Non-Finnish)
population: Latino
reference allele: G
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: MQ

17-7107545-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7107545
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7107545
    reference: chr 17
allele count: 2
allele frequency: 1.834458467860288e-5
allele num: 109024
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000388122
  ensembl transcript: ENST00000447163
  gene symbol: DLG4
  hgvsc: ENST00000447163.1:c.222C>T
  hgvsp: ENST00000447163.1:c.222C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000465789
  ensembl transcript: ENST00000493294
  gene symbol: DLG4
  hgvsc: ENST00000493294.1:c.-49C>T
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000382425
  ensembl transcript: ENST00000399506
  gene symbol: DLG4
  hgvsc: ENST00000399506.2:c.123C>T
  hgvsp: ENST00000399506.2:c.123C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000382428
  ensembl transcript: ENST00000399510
  gene symbol: DLG4
  hgvsc: ENST00000399510.2:c.252C>T
  hgvsp: ENST00000399510.2:c.252C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000407918
  ensembl transcript: ENST00000451807
  gene symbol: DLG4
  hgvsc: ENST00000451807.2:c.222C>T
  hgvsp: ENST00000451807.2:c.222C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000307471
  ensembl transcript: ENST00000302955
  gene symbol: DLG4
  hgvsc: ENST00000302955.6:c.123C>T
  hgvsp: ENST00000302955.6:c.123C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000465720
  ensembl transcript: ENST00000486626
  gene symbol: DLG4
  hgvsc: ENST00000486626.3:c.-58C>T
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000460625
  ensembl transcript: ENST00000485100
  gene symbol: DLG4
  hgvsc: ENST00000485100.1:c.123C>T
  hgvsp: ENST00000485100.1:c.123C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2903
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1245
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5596
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35034
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1589
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4190
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8406
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 963
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 258
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 540
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 987
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 258
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2783
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Asn84Asn
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: South Asian
population: Latino
population: African
reference allele: G
site quality: FS
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum

17-7107559-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7107559
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7107559
    reference: chr 17
allele count: 1
allele frequency: 9.223560663358482e-6
allele num: 108418
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000407918
  ensembl transcript: ENST00000451807
  gene symbol: DLG4
  hgvsc: ENST00000451807.2:c.208C>G
  hgvsp: ENSP00000407918.2:p.Pro70Ala
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000307471
  ensembl transcript: ENST00000302955
  gene symbol: DLG4
  hgvsc: ENST00000302955.6:c.109C>G
  hgvsp: ENSP00000307471.6:p.Pro37Ala
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000465789
  ensembl transcript: ENST00000493294
  gene symbol: DLG4
  hgvsc: ENST00000493294.1:c.-63C>G
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000388122
  ensembl transcript: ENST00000447163
  gene symbol: DLG4
  hgvsc: ENST00000447163.1:c.208C>G
  hgvsp: ENSP00000388122.1:p.Pro70Ala
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000382425
  ensembl transcript: ENST00000399506
  gene symbol: DLG4
  hgvsc: ENST00000399506.2:c.109C>G
  hgvsp: ENSP00000382425.2:p.Pro37Ala
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000382428
  ensembl transcript: ENST00000399510
  gene symbol: DLG4
  hgvsc: ENST00000399510.2:c.238C>G
  hgvsp: ENSP00000382428.2:p.Pro80Ala
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000460625
  ensembl transcript: ENST00000485100
  gene symbol: DLG4
  hgvsc: ENST00000485100.1:c.109C>G
  hgvsp: ENSP00000460625.1:p.Pro37Ala
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000465720
  ensembl transcript: ENST00000486626
  gene symbol: DLG4
  hgvsc: ENST00000486626.3:c.-72C>G
  variant of: http://identifiers.org/hgnc/2903
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1037
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4910
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5694
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1245
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1644
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8958
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33338
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 634
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 131
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 996
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 685
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3763
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1103
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 179
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Pro80Ala
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Finnish)
population: Latino
population: African
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum

17-7107560-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7107560
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7107560
    reference: chr 17
allele count: 1
allele frequency: 9.223390518354548e-6
allele num: 108420
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000460625
  ensembl transcript: ENST00000485100
  gene symbol: DLG4
  hgvsc: ENST00000485100.1:c.108C>T
  hgvsp: ENST00000485100.1:c.108C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000382428
  ensembl transcript: ENST00000399510
  gene symbol: DLG4
  hgvsc: ENST00000399510.2:c.237C>T
  hgvsp: ENST00000399510.2:c.237C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000465720
  ensembl transcript: ENST00000486626
  gene symbol: DLG4
  hgvsc: ENST00000486626.3:c.-73C>T
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000465789
  ensembl transcript: ENST00000493294
  gene symbol: DLG4
  hgvsc: ENST00000493294.1:c.-64C>T
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000382425
  ensembl transcript: ENST00000399506
  gene symbol: DLG4
  hgvsc: ENST00000399506.2:c.108C>T
  hgvsp: ENST00000399506.2:c.108C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000407918
  ensembl transcript: ENST00000451807
  gene symbol: DLG4
  hgvsc: ENST00000451807.2:c.207C>T
  hgvsp: ENST00000451807.2:c.207C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000388122
  ensembl transcript: ENST00000447163
  gene symbol: DLG4
  hgvsc: ENST00000447163.1:c.207C>T
  hgvsp: ENST00000447163.1:c.207C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000307471
  ensembl transcript: ENST00000302955
  gene symbol: DLG4
  hgvsc: ENST00000302955.6:c.108C>T
  hgvsp: ENST00000302955.6:c.108C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2903
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5700
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4887
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8987
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1622
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 419
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 632
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1007
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33380
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1245
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 525
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3761
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 442
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 415
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 171
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38519
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Pro79Pro
num of homozygotes: 0
population: Latino
population: South Asian
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: MQ

17-7107567-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7107567
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7107567
    reference: chr 17
allele count: 1
allele frequency: 9.341254717333632e-6
allele num: 107052
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000307471
  ensembl transcript: ENST00000302955
  gene symbol: DLG4
  hgvsc: ENST00000302955.6:c.101A>G
  hgvsp: ENSP00000307471.6:p.Asn34Ser
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000460625
  ensembl transcript: ENST00000485100
  gene symbol: DLG4
  hgvsc: ENST00000485100.1:c.101A>G
  hgvsp: ENSP00000460625.1:p.Asn34Ser
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000382425
  ensembl transcript: ENST00000399506
  gene symbol: DLG4
  hgvsc: ENST00000399506.2:c.101A>G
  hgvsp: ENSP00000382425.2:p.Asn34Ser
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000465720
  ensembl transcript: ENST00000486626
  gene symbol: DLG4
  hgvsc: ENST00000486626.3:c.-80A>G
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000388122
  ensembl transcript: ENST00000447163
  gene symbol: DLG4
  hgvsc: ENST00000447163.1:c.200A>G
  hgvsp: ENSP00000388122.1:p.Asn67Ser
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000382428
  ensembl transcript: ENST00000399510
  gene symbol: DLG4
  hgvsc: ENST00000399510.2:c.230A>G
  hgvsp: ENSP00000382428.2:p.Asn77Ser
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000407918
  ensembl transcript: ENST00000451807
  gene symbol: DLG4
  hgvsc: ENST00000451807.2:c.200A>G
  hgvsp: ENSP00000407918.2:p.Asn67Ser
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000465789
  ensembl transcript: ENST00000493294
  gene symbol: DLG4
  hgvsc: ENST00000493294.1:c.-71A>G
  variant of: http://identifiers.org/hgnc/2903
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6152
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6429
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1588
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1244
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9156
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1301
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30744
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 659
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1447
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35043
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 124
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 987
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 175
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 693
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 372
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Asn77Ser
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: African
population: East Asian
population: Latino
population: South Asian
reference allele: T
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP

http://identifiers.org/exac.variant/17-7107571-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7107571
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7107571
    reference: chr 17
allele count: 2
allele frequency: 1.874133213388808e-5
allele num: 106716
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000407918
  ensembl transcript: ENST00000451807
  gene symbol: DLG4
  hgvsc: ENST00000451807.2:c.196G>T
  hgvsp: ENSP00000407918.2:p.Ala66Ser
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000388122
  ensembl transcript: ENST00000447163
  gene symbol: DLG4
  hgvsc: ENST00000447163.1:c.196G>T
  hgvsp: ENSP00000388122.1:p.Ala66Ser
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000465789
  ensembl transcript: ENST00000493294
  gene symbol: DLG4
  hgvsc: ENST00000493294.1:c.-75G>T
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000307471
  ensembl transcript: ENST00000302955
  gene symbol: DLG4
  hgvsc: ENST00000302955.6:c.97G>T
  hgvsp: ENSP00000307471.6:p.Ala33Ser
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000460625
  ensembl transcript: ENST00000485100
  gene symbol: DLG4
  hgvsc: ENST00000485100.1:c.97G>T
  hgvsp: ENSP00000460625.1:p.Ala33Ser
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000382428
  ensembl transcript: ENST00000399510
  gene symbol: DLG4
  hgvsc: ENST00000399510.2:c.226G>T
  hgvsp: ENSP00000382428.2:p.Ala76Ser
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000382425
  ensembl transcript: ENST00000399506
  gene symbol: DLG4
  hgvsc: ENST00000399506.2:c.97G>T
  hgvsp: ENSP00000382425.2:p.Ala33Ser
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000465720
  ensembl transcript: ENST00000486626
  gene symbol: DLG4
  hgvsc: ENST00000486626.3:c.-84G>T
  variant of: http://identifiers.org/hgnc/2903
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 631
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30330
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9286
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 693
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1643
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6197
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6575
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1244
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1293
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 136
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 639
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 624
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 922
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3763
  bin: 9.75e1
  variant carriers: 2
hgvs: p.Ala76Ser
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: African
population: Latino
population: Other
population: European (Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: ReadPosRankSum

17-7107577-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7107577
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7107577
    reference: chr 17
allele count: 10
allele frequency: 9.448937939375614e-5
allele num: 105832
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000307471
  ensembl transcript: ENST00000302955
  gene symbol: DLG4
  hgvsc: ENST00000302955.6:c.97-6A>T
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000382428
  ensembl transcript: ENST00000399510
  gene symbol: DLG4
  hgvsc: ENST00000399510.2:c.226-6A>T
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000388122
  ensembl transcript: ENST00000447163
  gene symbol: DLG4
  hgvsc: ENST00000447163.1:c.196-6A>T
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000465720
  ensembl transcript: ENST00000486626
  gene symbol: DLG4
  hgvsc: ENST00000486626.3:c.-90A>T
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000465789
  ensembl transcript: ENST00000493294
  gene symbol: DLG4
  hgvsc: ENST00000493294.1:c.-75-6A>T
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000382425
  ensembl transcript: ENST00000399506
  gene symbol: DLG4
  hgvsc: ENST00000399506.2:c.97-6A>T
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000407918
  ensembl transcript: ENST00000451807
  gene symbol: DLG4
  hgvsc: ENST00000451807.2:c.196-6A>T
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000460625
  ensembl transcript: ENST00000485100
  gene symbol: DLG4
  hgvsc: ENST00000485100.1:c.97-6A>T
  variant of: http://identifiers.org/hgnc/2903
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9133
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1553
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28669
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7814
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1423
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 617
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1244
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 898
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6533
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 419
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 165
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 757
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10827
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2546
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3770
  bin: 9.75e1
  variant carriers: 11
hgvs: c.226-6A>T
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
population: European (Finnish)
population: South Asian
population: Other
reference allele: T
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum

http://identifiers.org/exac.variant/17-7107585-CAA-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7107585
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7107583
    reference: chr 17
allele count: 2
allele frequency: 1.923816852635629e-5
allele num: 103960
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000382425
  ensembl transcript: ENST00000399506
  gene symbol: DLG4
  hgvsc: ENST00000399506.2:c.97-16_97-15delTT
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000460625
  ensembl transcript: ENST00000485100
  gene symbol: DLG4
  hgvsc: ENST00000485100.1:c.97-16_97-15delTT
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000407918
  ensembl transcript: ENST00000451807
  gene symbol: DLG4
  hgvsc: ENST00000451807.2:c.196-16_196-15delTT
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000307471
  ensembl transcript: ENST00000302955
  gene symbol: DLG4
  hgvsc: ENST00000302955.6:c.97-16_97-15delTT
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000388122
  ensembl transcript: ENST00000447163
  gene symbol: DLG4
  hgvsc: ENST00000447163.1:c.196-16_196-15delTT
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000465720
  ensembl transcript: ENST00000486626
  gene symbol: DLG4
  hgvsc: ENST00000486626.3:c.-100_-99delTT
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000465789
  ensembl transcript: ENST00000493294
  gene symbol: DLG4
  hgvsc: ENST00000493294.1:c.-75-16_-75-15delTT
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000382428
  ensembl transcript: ENST00000399510
  gene symbol: DLG4
  hgvsc: ENST00000399510.2:c.226-16_226-15delTT
  variant of: http://identifiers.org/hgnc/2903
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24837
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2263
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6974
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8759
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1284
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 610
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1518
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10396
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1244
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 255
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 310
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 557
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3761
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 575
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 445
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2408
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 334
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: South Asian
population: East Asian
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
reference allele: CAA
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: MQ

17-7107593-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7107593
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7107593
    reference: chr 17
allele count: 1
allele frequency: 9.782055796846265e-6
allele num: 102228
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000382425
  ensembl transcript: ENST00000399506
  gene symbol: DLG4
  hgvsc: ENST00000399506.2:c.97-22T>C
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000465789
  ensembl transcript: ENST00000493294
  gene symbol: DLG4
  hgvsc: ENST00000493294.1:c.-75-22T>C
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000382428
  ensembl transcript: ENST00000399510
  gene symbol: DLG4
  hgvsc: ENST00000399510.2:c.226-22T>C
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000407918
  ensembl transcript: ENST00000451807
  gene symbol: DLG4
  hgvsc: ENST00000451807.2:c.196-22T>C
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000388122
  ensembl transcript: ENST00000447163
  gene symbol: DLG4
  hgvsc: ENST00000447163.1:c.196-22T>C
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000307471
  ensembl transcript: ENST00000302955
  gene symbol: DLG4
  hgvsc: ENST00000302955.6:c.97-22T>C
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000465720
  ensembl transcript: ENST00000486626
  gene symbol: DLG4
  hgvsc: ENST00000486626.3:c.-106T>C
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000460625
  ensembl transcript: ENST00000485100
  gene symbol: DLG4
  hgvsc: ENST00000485100.1:c.97-22T>C
  variant of: http://identifiers.org/hgnc/2903
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1439
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1827
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19645
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 612
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13618
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7780
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4377
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7320
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1244
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 437
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1904
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 637
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2455
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 509
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 168
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3301
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1847
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: Latino
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD

17-7107602-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7107602
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7107602
    reference: chr 17
allele count: 1
allele frequency: 9.991806718490837e-6
allele num: 100082
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000407918
  ensembl transcript: ENST00000451807
  gene symbol: DLG4
  hgvsc: ENST00000451807.2:c.196-31G>A
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000388122
  ensembl transcript: ENST00000447163
  gene symbol: DLG4
  hgvsc: ENST00000447163.1:c.196-31G>A
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000465789
  ensembl transcript: ENST00000493294
  gene symbol: DLG4
  hgvsc: ENST00000493294.1:c.-75-31G>A
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000307471
  ensembl transcript: ENST00000302955
  gene symbol: DLG4
  hgvsc: ENST00000302955.6:c.97-31G>A
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000465720
  ensembl transcript: ENST00000486626
  gene symbol: DLG4
  hgvsc: ENST00000486626.3:c.-115G>A
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000382428
  ensembl transcript: ENST00000399510
  gene symbol: DLG4
  hgvsc: ENST00000399510.2:c.226-31G>A
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000460625
  ensembl transcript: ENST00000485100
  gene symbol: DLG4
  hgvsc: ENST00000485100.1:c.97-31G>A
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000382425
  ensembl transcript: ENST00000399506
  gene symbol: DLG4
  hgvsc: ENST00000399506.2:c.97-31G>A
  variant of: http://identifiers.org/hgnc/2903
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13677
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7710
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9011
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5889
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1319
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2338
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16048
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1244
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 264
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13106
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3759
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 461
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1568
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 364
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4248
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1453
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: African
population: European (Finnish)
reference allele: C
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD

17-7107605-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7107605
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7107605
    reference: chr 17
allele count: 1
allele frequency: 1.006299434459718e-5
allele num: 99374
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000407918
  ensembl transcript: ENST00000451807
  gene symbol: DLG4
  hgvsc: ENST00000451807.2:c.196-34C>T
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000460625
  ensembl transcript: ENST00000485100
  gene symbol: DLG4
  hgvsc: ENST00000485100.1:c.97-34C>T
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000388122
  ensembl transcript: ENST00000447163
  gene symbol: DLG4
  hgvsc: ENST00000447163.1:c.196-34C>T
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000382428
  ensembl transcript: ENST00000399510
  gene symbol: DLG4
  hgvsc: ENST00000399510.2:c.226-34C>T
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000465720
  ensembl transcript: ENST00000486626
  gene symbol: DLG4
  hgvsc: ENST00000486626.3:c.-118C>T
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000465789
  ensembl transcript: ENST00000493294
  gene symbol: DLG4
  hgvsc: ENST00000493294.1:c.-75-34C>T
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000307471
  ensembl transcript: ENST00000302955
  gene symbol: DLG4
  hgvsc: ENST00000302955.6:c.97-34C>T
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000382425
  ensembl transcript: ENST00000399506
  gene symbol: DLG4
  hgvsc: ENST00000399506.2:c.97-34C>T
  variant of: http://identifiers.org/hgnc/2903
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16206
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2487
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10917
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11910
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1258
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1244
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5308
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7901
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 414
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 255
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1035
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 504
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 252
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 517
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1647
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 967
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12790
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: African
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: DP

17-7107608-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7107608
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7107608
    reference: chr 17
allele count: 0
allele frequency: 0.0e0
allele num: 98098
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000307471
  ensembl transcript: ENST00000302955
  gene symbol: DLG4
  hgvsc: ENST00000302955.6:c.97-37G>C
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000407918
  ensembl transcript: ENST00000451807
  gene symbol: DLG4
  hgvsc: ENST00000451807.2:c.196-37G>C
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000465720
  ensembl transcript: ENST00000486626
  gene symbol: DLG4
  hgvsc: ENST00000486626.3:c.-121G>C
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000382425
  ensembl transcript: ENST00000399506
  gene symbol: DLG4
  hgvsc: ENST00000399506.2:c.97-37G>C
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000460625
  ensembl transcript: ENST00000485100
  gene symbol: DLG4
  hgvsc: ENST00000485100.1:c.97-37G>C
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000382428
  ensembl transcript: ENST00000399510
  gene symbol: DLG4
  hgvsc: ENST00000399510.2:c.226-37G>C
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000465789
  ensembl transcript: ENST00000493294
  gene symbol: DLG4
  hgvsc: ENST00000493294.1:c.-75-37G>C
  variant of: http://identifiers.org/hgnc/2903
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000132535
  ensembl protein: ENSP00000388122
  ensembl transcript: ENST00000447163
  gene symbol: DLG4
  hgvsc: ENST00000447163.1:c.196-37G>C
  variant of: http://identifiers.org/hgnc/2903
canonical: false
consequence: 5' UTR
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8258
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 600
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1219
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13332
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10031
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2595
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1244
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
reference allele: C

GenotypeQuality
all individuals: 291
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44620
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 714
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 302
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 707
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1127
bin: 9.75e1
variant carriers: 46

GenotypeQuality
all individuals: 150
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 148
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1505
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 282
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1892
bin: 7.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16354
num of homozygotes: 0

African
type: Population
allele count: 43
allele frequency: 4.422048539695599e-3
allele num: 9724
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.729206294310911e-4
allele num: 11566
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.017774692941425e-5
allele num: 66274
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.4e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.77e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.39e-1

QD
type: SiteQuality
SIO_000300: 1.254e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.07e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.122e0

VQSLOD
type: SiteQuality
SIO_000300: 3.79e0

DP
type: SiteQuality
SIO_000300: 1.583704e6

MQ
type: SiteQuality
SIO_000300: 5.976e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.0e-3

GenotypeQuality
all individuals: 14
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 142
bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 120
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 76
bin: 7.5e0
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GenotypeQuality
all individuals: 613
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 99
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44890
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
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GenotypeQuality
all individuals: 1904
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1523
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7963
bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9724
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.646031471554557e-5
allele num: 11566
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66310
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16410
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8616
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.36e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.3e0

FS
type: SiteQuality
SIO_000300: 4.88e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.02e-1

MQ
type: SiteQuality
SIO_000300: 5.984e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.9e-3

DP
type: SiteQuality
SIO_000300: 1.585469e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.52e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.623e0

QD
type: SiteQuality
SIO_000300: 1.786e1

GenotypeQuality
all individuals: 14
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 289
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1908
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 213
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 2.5e0
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GenotypeQuality
all individuals: 108
bin: 4.75e1
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 6
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variant carriers: 0

GenotypeQuality
all individuals: 7998
bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.015499668295036e-5
allele num: 66324
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9726
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8616
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16422
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 9.86e-1

FS
type: SiteQuality
SIO_000300: 5.38e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.6e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 1.3e0

VQSLOD
type: SiteQuality
SIO_000300: -2.715e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.45e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.42e0

DP
type: SiteQuality
SIO_000300: 1.58678e6

QD
type: SiteQuality
SIO_000300: 1.213e1

GenotypeQuality
all individuals: 86
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 135
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 7.5e0
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GenotypeQuality
all individuals: 8061
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variant carriers: 0

GenotypeQuality
all individuals: 11
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 149
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1550
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variant carriers: 0

GenotypeQuality
all individuals: 1094
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 289
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.073120369245719e-5
allele num: 16466
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66372
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9724
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8616
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.05e0

VQSLOD
type: SiteQuality
SIO_000300: -2.35e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.99e-1

MQRankSum
type: SiteQuality
SIO_000300: -8.2e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.3e-3

FS
type: SiteQuality
SIO_000300: 9.315e0

DP
type: SiteQuality
SIO_000300: 1.590774e6

QD
type: SiteQuality
SIO_000300: 1.202e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.62e0

GenotypeQuality
all individuals: 406
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 298
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 722
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variant carriers: 0

GenotypeQuality
all individuals: 1941
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variant carriers: 0

GenotypeQuality
all individuals: 8
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variant carriers: 0

GenotypeQuality
all individuals: 17
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GenotypeQuality
all individuals: 153
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variant carriers: 0

GenotypeQuality
all individuals: 70
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GenotypeQuality
all individuals: 67
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variant carriers: 0

GenotypeQuality
all individuals: 8066
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variant carriers: 0

GenotypeQuality
all individuals: 1094
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 149
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 111
bin: 4.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8616
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9722
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66384
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.068697657482704e-5
allele num: 16478
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 7.35e-1

MQRankSum
type: SiteQuality
SIO_000300: 9.6e-1

MQ
type: SiteQuality
SIO_000300: 5.938e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.01e0

VQSLOD
type: SiteQuality
SIO_000300: 1.52e0

QD
type: SiteQuality
SIO_000300: 1.023e1

FS
type: SiteQuality
SIO_000300: 2.212e0

DP
type: SiteQuality
SIO_000300: 1.591164e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.3e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -1.185e0

GenotypeQuality
all individuals: 724
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 122
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 97
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variant carriers: 0

GenotypeQuality
all individuals: 78
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variant carriers: 0

GenotypeQuality
all individuals: 8084
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variant carriers: 0

GenotypeQuality
all individuals: 19
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variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 386
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variant carriers: 0

GenotypeQuality
all individuals: 11
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variant carriers: 0

GenotypeQuality
all individuals: 138
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1094
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 292
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8616
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16486
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.506296318611797e-5
allele num: 66388
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9724
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.232e1

MQRankSum
type: SiteQuality
SIO_000300: 8.41e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.222e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.566e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.4e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.900000000000001e-3

DP
type: SiteQuality
SIO_000300: 1.592563e6

FS
type: SiteQuality
SIO_000300: 1.43e0

VQSLOD
type: SiteQuality
SIO_000300: 9.67e-1

MQ
type: SiteQuality
SIO_000300: 5.981e1

GenotypeQuality
all individuals: 109
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 102
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GenotypeQuality
all individuals: 48
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GenotypeQuality
all individuals: 292
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 324
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1094
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 725
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 299
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1567
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variant carriers: 0

GenotypeQuality
all individuals: 1957
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variant carriers: 0

GenotypeQuality
all individuals: 85
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variant carriers: 0

GenotypeQuality
all individuals: 8122
bin: 6.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16496
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9724
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.505797319680771e-5
allele num: 66410
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.1e-3

MQ
type: SiteQuality
SIO_000300: 5.938e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.38e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.22e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.22e-1

FS
type: SiteQuality
SIO_000300: 3.282e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.22e-1

QD
type: SiteQuality
SIO_000300: 1.099e1

VQSLOD
type: SiteQuality
SIO_000300: 8.53e-1

DP
type: SiteQuality
SIO_000300: 1.594442e6

GenotypeQuality
all individuals: 31
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 730
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GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23
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variant carriers: 0

GenotypeQuality
all individuals: 65
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variant carriers: 0

GenotypeQuality
all individuals: 67
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GenotypeQuality
all individuals: 262
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 1092
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GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1976
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variant carriers: 0

GenotypeQuality
all individuals: 8156
bin: 6.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9746
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.504800312998465e-5
allele num: 66454
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.84e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.8e-3

FS
type: SiteQuality
SIO_000300: 5.649999999999999e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.03e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.83e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.649999999999999e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.33e-1

DP
type: SiteQuality
SIO_000300: 1.597288e6

MQ
type: SiteQuality
SIO_000300: 5.993e1

QD
type: SiteQuality
SIO_000300: 1.359e1

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1993
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variant carriers: 0

GenotypeQuality
all individuals: 1
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GenotypeQuality
all individuals: 36
bin: 5.25e1
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GenotypeQuality
all individuals: 23
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 303
bin: 8.75e1
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GenotypeQuality
all individuals: 11
bin: 4.25e1
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GenotypeQuality
all individuals: 1600
bin: 7.75e1
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GenotypeQuality
all individuals: 736
bin: 8.25e1
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GenotypeQuality
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GenotypeQuality
all individuals: 16
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GenotypeQuality
all individuals: 168
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1099
bin: 9.75e1
variant carriers: 7

Latino
type: Population
allele count: 2
allele frequency: 1.730403183941858e-4
allele num: 11558
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9786
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.507958435942099e-5
allele num: 66596
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

DP
type: SiteQuality
SIO_000300: 1.60083e6

VQSLOD
type: SiteQuality
SIO_000300: 7.2e-1

MQ
type: SiteQuality
SIO_000300: 5.931e1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.0e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.929999999999999e-1

QD
type: SiteQuality
SIO_000300: 1.414e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.54e0

MQRankSum
type: SiteQuality
SIO_000300: -3.6e-2

FS
type: SiteQuality
SIO_000300: 3.093e0

GenotypeQuality
all individuals: 24
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8167
bin: 6.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66566
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9770
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

South Asian
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allele frequency: 6.05913717886573e-5
allele num: 16504
num of homozygotes: 0

Other
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FS
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ReadPosRankSum
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BaseQRankSum
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QD
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VQSLOD
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MQ
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MQRankSum
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InbreedingCoeff
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SIO_000300: 2.0e-3

ClippingRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

European (Finnish)
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allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16498
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.502674761074713e-5
allele num: 66548
num of homozygotes: 0

VQSLOD
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BaseQRankSum
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FS
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MQ
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ClippingRankSum
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MQRankSum
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ReadPosRankSum
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InbreedingCoeff
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QD
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

Latino
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allele frequency: 0.0e0
allele num: 11536
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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African
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allele count: 1
allele frequency: 1.026061974143238e-4
allele num: 9746
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East Asian
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
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InbreedingCoeff
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ReadPosRankSum
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BaseQRankSum
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FS
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DP
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VQSLOD
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ClippingRankSum
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MQ
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MQRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 1
allele frequency: 1.160900859066636e-4
allele num: 8614
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66504
num of homozygotes: 0

QD
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MQ
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MQRankSum
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ClippingRankSum
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FS
type: SiteQuality
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InbreedingCoeff
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VQSLOD
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DP
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ReadPosRankSum
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8520
num of homozygotes: 0

Latino
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allele frequency: 8.821453775582216e-5
allele num: 11336
num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.521051350693599e-5
allele num: 65744
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ReadPosRankSum
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MQRankSum
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FS
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VQSLOD
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MQ
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BaseQRankSum
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ClippingRankSum
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InbreedingCoeff
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DP
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QD
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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South Asian
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East Asian
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allele frequency: 0.0e0
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European (Finnish)
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African
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allele num: 9500
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Other
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VQSLOD
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ReadPosRankSum
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DP
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MQRankSum
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ClippingRankSum
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FS
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QD
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MQ
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BaseQRankSum
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InbreedingCoeff
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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Latino
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East Asian
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European (Finnish)
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African
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European (Non-Finnish)
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allele num: 64282
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MQ
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MQRankSum
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FS
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VQSLOD
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BaseQRankSum
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DP
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ReadPosRankSum
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ClippingRankSum
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QD
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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European (Non-Finnish)
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African
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East Asian
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Other
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European (Finnish)
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Latino
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VQSLOD
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FS
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QD
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InbreedingCoeff
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DP
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BaseQRankSum
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ReadPosRankSum
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MQ
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MQRankSum
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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African
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South Asian
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European (Finnish)
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Latino
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Other
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European (Non-Finnish)
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allele frequency: 1.564308731971342e-5
allele num: 63926
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.374e0

BaseQRankSum
type: SiteQuality
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QD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 1.18e0

VQSLOD
type: SiteQuality
SIO_000300: -9.697e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

MQRankSum
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SIO_000300: 5.96e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.390838e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.04e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8208
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6388
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9250
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15942
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.565190170605729e-5
allele num: 63890
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10818
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 858
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.09e0

FS
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.38799e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.868e0

QD
type: SiteQuality
SIO_000300: 1.253e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.33e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 7.44e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.34e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8176
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6362
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.57114127702363e-5
allele num: 63648
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10752
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9210
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 856
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 15892
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.77e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 5.95e-1

DP
type: SiteQuality
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QD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
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SIO_000300: -5.5e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 2.05e0

MQRankSum
type: SiteQuality
SIO_000300: -4.98e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 852
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8162
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 10744
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 63622
num of homozygotes: 0

South Asian
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allele frequency: 6.301991429291656e-5
allele num: 15868
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9206
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6358
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.145e1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.343414e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.72e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.15e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.02e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 7.51e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 9.78e-1

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10726
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15868
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9188
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63594
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 854
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8164
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6348
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -9.6e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.75e-1

VQSLOD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.342184e6

FS
type: SiteQuality
SIO_000300: 1.457e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.6e-3

QD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -1.25e-1

MQ
type: SiteQuality
SIO_000300: 5.925e1

MQRankSum
type: SiteQuality
SIO_000300: -2.9e-2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8076
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6314
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 15754
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 836
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.099384344766931e-4
allele num: 9096
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10548
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63016
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.249519e6

MQRankSum
type: SiteQuality
SIO_000300: -3.75e-1

BaseQRankSum
type: SiteQuality
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InbreedingCoeff
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FS
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.207e1

VQSLOD
type: SiteQuality
SIO_000300: 2.2e-2

ReadPosRankSum
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ClippingRankSum
type: SiteQuality
SIO_000300: -2.627e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8012
num of homozygotes: 0

African
type: Population
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allele frequency: 0.0e0
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South Asian
type: Population
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allele frequency: 6.388143605468251e-5
allele num: 15654
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 62572
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6286
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 834
num of homozygotes: 0

Latino
type: Population
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num of homozygotes: 0

MQ
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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MQRankSum
type: SiteQuality
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ReadPosRankSum
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ClippingRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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BaseQRankSum
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DP
type: SiteQuality
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FS
type: SiteQuality
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QD
type: SiteQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.25e1
variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9030
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
allele num: 15654
num of homozygotes: 0

Latino
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allele count: 1
allele frequency: 9.573042312847023e-5
allele num: 10446
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6286
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 834
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 62572
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
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QD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.206945e6

ClippingRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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MQRankSum
type: SiteQuality
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MQ
type: SiteQuality
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FS
type: SiteQuality
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VQSLOD
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele frequency: 1.138433515482696e-4
allele num: 8784
num of homozygotes: 0

East Asian
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South Asian
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allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 61172
num of homozygotes: 0

Other
type: Population
allele count: 0
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num of homozygotes: 0

Latino
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ClippingRankSum
type: SiteQuality
SIO_000300: 8.49e-1

MQRankSum
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InbreedingCoeff
type: SiteQuality
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MQ
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BaseQRankSum
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VQSLOD
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ReadPosRankSum
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DP
type: SiteQuality
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QD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 1.1139e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7354
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7810
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 51962
num of homozygotes: 0

East Asian
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5000
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South Asian
type: Population
allele count: 1
allele frequency: 7.649938800489595e-5
allele num: 13072
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VQSLOD
type: SiteQuality
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DP
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QD
type: SiteQuality
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BaseQRankSum
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InbreedingCoeff
type: SiteQuality
SIO_000300: -3.9e-3

MQRankSum
type: SiteQuality
SIO_000300: 1.17e0

FS
type: SiteQuality
SIO_000300: 2.197e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.2e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.2e-1

MQ
type: SiteQuality
SIO_000300: 5.911e1

GenotypeQuality
all individuals: 617
bin: 2.5e0
variant carriers: 2

GenotypeQuality
all individuals: 8619
bin: 9.75e1
variant carriers: 622

GenotypeQuality
all individuals: 576
bin: 7.75e1
variant carriers: 18

GenotypeQuality
all individuals: 14932
bin: 2.25e1
variant carriers: 5

GenotypeQuality
all individuals: 2727
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 566
bin: 5.75e1
variant carriers: 6

GenotypeQuality
all individuals: 1466
bin: 5.25e1
variant carriers: 8

GenotypeQuality
all individuals: 1253
bin: 7.5e0
variant carriers: 5

GenotypeQuality
all individuals: 338
bin: 8.75e1
variant carriers: 19

GenotypeQuality
all individuals: 2197
bin: 4.25e1
variant carriers: 10

GenotypeQuality
all individuals: 5150
bin: 3.75e1
variant carriers: 6

GenotypeQuality
all individuals: 5191
bin: 6.25e1
variant carriers: 9

European (Non-Finnish)
type: Population
allele count: 17
allele frequency: 3.31396935553043e-4
allele num: 51298
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4942
num of homozygotes: 0

African
type: Population
allele count: 654
allele frequency: 8.897959183673469e-2
allele num: 7350
num of homozygotes: 32

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12948
num of homozygotes: 0

Latino
type: Population
allele count: 39
allele frequency: 5.090054815974941e-3
allele num: 7662
num of homozygotes: 0

Other
type: Population
allele count: 3
allele frequency: 4.451038575667656e-3
allele num: 674
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6356
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.22e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.2e0

DP
type: SiteQuality
SIO_000300: 1.486775e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.42e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.67e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.54e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.05e-2

QD
type: SiteQuality
SIO_000300: 1.524e1

GenotypeQuality
all individuals: 1162
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 240
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2080
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6737
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5080
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 587
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8163
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 490
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1127
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2490
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 443
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 512
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.929682374281193e-5
allele num: 51822
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 684
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7828
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7318
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4998
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 3.123048094940662e-4
allele num: 6404
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13036
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 2.5e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.3e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 1.59e0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.67e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.94e-1

DP
type: SiteQuality
SIO_000300: 1.492762e6

QD
type: SiteQuality
SIO_000300: 1.19e1

MQRankSum
type: SiteQuality
SIO_000300: 7.41e-1

GenotypeQuality
all individuals: 683
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11900
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 474
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 514
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3616
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16943
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 938
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1292
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1128
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4489
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 655
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 505
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7862
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 52196
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 686
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6546
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.665184730952016e-5
allele num: 13046
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7348
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5020
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.95e-1

MQ
type: SiteQuality
SIO_000300: 5.99e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.7e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 5.6e-2

FS
type: SiteQuality
SIO_000300: 6.909999999999999e-1

DP
type: SiteQuality
SIO_000300: 1.534765e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.9e-2

VQSLOD
type: SiteQuality
SIO_000300: 3.09e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.849e0

QD
type: SiteQuality
SIO_000300: 1.356e1

GenotypeQuality
all individuals: 16943
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 683
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 505
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 282
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 514
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 472
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11900
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8164
bin: 9.75e1
variant carriers: 6

GenotypeQuality
all individuals: 3616
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 655
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 716
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5594
bin: 3.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.99203187250996e-4
allele num: 5020
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6546
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.831711242240785e-5
allele num: 52196
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.533036946190403e-4
allele num: 13046
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7862
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.360914534567229e-4
allele num: 7348
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 686
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.95e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.7e-3

DP
type: SiteQuality
SIO_000300: 1.534765e6

VQSLOD
type: SiteQuality
SIO_000300: 3.09e0

MQ
type: SiteQuality
SIO_000300: 5.99e1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.6e-2

FS
type: SiteQuality
SIO_000300: 6.909999999999999e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.9e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -1.849e0

QD
type: SiteQuality
SIO_000300: 1.356e1

GenotypeQuality
all individuals: 13535
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 524
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1062
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 383
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5354
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4393
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 611
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8163
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3268
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 518
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 483
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 508
bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 692
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 52410
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7392
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6532
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5040
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13102
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.11e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.3e-3

QD
type: SiteQuality
SIO_000300: 1.112e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.435e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.6e-2

MQRankSum
type: SiteQuality
SIO_000300: 3.61e-1

DP
type: SiteQuality
SIO_000300: 1.544572e6

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.61e-1

GenotypeQuality
all individuals: 508
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 521
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 140
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 467
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 306
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 326
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 574
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1464
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8167
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 636
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 517
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 853
bin: 4.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5088
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 7.574323044877864e-5
allele num: 52810
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6640
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 694
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7412
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8012
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13134
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.719e0

VQSLOD
type: SiteQuality
SIO_000300: 2.05e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.61e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.36e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.8e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -9.83e-1

DP
type: SiteQuality
SIO_000300: 1.554686e6

QD
type: SiteQuality
SIO_000300: 1.279e1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.95e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 525
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2287
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 493
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 409
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 664
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 818
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16399
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8165
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 328
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1560
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 265
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3889
bin: 2.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 696
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.883239171374765e-5
allele num: 53100
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7468
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13130
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8092
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5134
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6710
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.127e0

DP
type: SiteQuality
SIO_000300: 1.578063e6

MQ
type: SiteQuality
SIO_000300: 5.866e1

QD
type: SiteQuality
SIO_000300: 1.207e1

MQRankSum
type: SiteQuality
SIO_000300: -7.61e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.3e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

FS
type: SiteQuality
SIO_000300: 1.287e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.475e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
all individuals: 4121
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 605
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3746
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 876
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16829
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 417
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1610
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 967
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2057
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 807
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 654
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 521
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6754
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7502
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 704
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.869298639150591e-5
allele num: 53496
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8144
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13190
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5172
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 7.15e-1

DP
type: SiteQuality
SIO_000300: 1.586723e6

QD
type: SiteQuality
SIO_000300: 1.538e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.385e0

FS
type: SiteQuality
SIO_000300: 7.707e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.1e-3

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 2.16e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.35e0

GenotypeQuality
all individuals: 339
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18283
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1790
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 535
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 561
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 525
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 931
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 609
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 327
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 749
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1646
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 557
bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6810
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.859358149566769e-5
allele num: 53782
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13204
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7538
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 716
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8240
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5190
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.632e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 1.2051e1

VQSLOD
type: SiteQuality
SIO_000300: -9.419999999999999e-1

DP
type: SiteQuality
SIO_000300: 1.60041e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.867e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.56e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-3

MQRankSum
type: SiteQuality
SIO_000300: 7.2e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.69e0

GenotypeQuality
all individuals: 952
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16681
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 353
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 190
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 552
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 559
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 532
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 538
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1745
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 329
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18403
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 691
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7554
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5206
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6836
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8272
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.858252499349612e-5
allele num: 53814
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13200
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 714
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.9e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -2.53e-1

DP
type: SiteQuality
SIO_000300: 1.602654e6

BaseQRankSum
type: SiteQuality
SIO_000300: -6.840000000000001e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.900000000000001e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.67e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -7.28e-1

QD
type: SiteQuality
SIO_000300: 9.59e0

GenotypeQuality
all individuals: 8168
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3436
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 178
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 689
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1665
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 541
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 442
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 736
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 553
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 327
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18970
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 314
bin: 1.75e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 1.208313194780087e-4
allele num: 8276
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7550
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6838
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 53832
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5206
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 714
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13204
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.23e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.35e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.5e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -1.376e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.38e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.606682e6

QD
type: SiteQuality
SIO_000300: 1.472e1

VQSLOD
type: SiteQuality
SIO_000300: -3.815e-1

GenotypeQuality
all individuals: 400
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 798
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3556
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1690
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16638
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3439
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 86
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 688
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variant carriers: 0

GenotypeQuality
all individuals: 1149
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 327
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 523
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 526
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5216
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6842
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7550
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8300
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13200
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.857355126300148e-5
allele num: 53840
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 716
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.042e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.54e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 7.35e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.36e0

DP
type: SiteQuality
SIO_000300: 1.606916e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.693e0

MQRankSum
type: SiteQuality
SIO_000300: 1.12e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.8e-3

FS
type: SiteQuality
SIO_000300: 1.1311e1

GenotypeQuality
all individuals: 59
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8169
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 329
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 568
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 261
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 518
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17236
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18994
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variant carriers: 0

GenotypeQuality
all individuals: 512
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 326
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1498
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3443
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 968
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1652
bin: 6.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5252
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.839181931876701e-5
allele num: 54372
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 732
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8316
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6936
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13162
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7586
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.619876e6

VQSLOD
type: SiteQuality
SIO_000300: -2.852e-1

QD
type: SiteQuality
SIO_000300: 7.42e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 5.83e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.69e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.12e0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.37e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.5e-3

GenotypeQuality
all individuals: 534
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 518
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 120
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 375
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 241
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 592
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 344
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 706
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 745
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18658
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8169
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3313
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1636
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 648
bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6944
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8266
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5248
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13146
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 734
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.846312913112514e-5
allele num: 54162
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 8.369999999999999e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 1.33e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.8e-3

VQSLOD
type: SiteQuality
SIO_000300: 6.7e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.44e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.93e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.330000000000001e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.617591e6

GenotypeQuality
all individuals: 2297
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 511
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8168
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1168
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 405
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4285
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1432
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 516
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 752
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 623
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 12704
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 518
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4326
bin: 3.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 52960
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7414
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6720
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7900
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 704
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12926
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5208
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -3.8e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.9e-3

DP
type: SiteQuality
SIO_000300: 1.566824e6

QD
type: SiteQuality
SIO_000300: 1.035e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.8e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.5e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.189e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.5e-1

MQ
type: SiteQuality
SIO_000300: 5.895e1

GenotypeQuality
all individuals: 8181
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 826
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1308
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4363
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19361
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1250
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 518
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 169
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 325
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 620
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 324
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 859
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 515
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7402
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6666
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12854
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7754
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.934984520123839e-4
allele num: 5168
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 704
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.899551705797432e-5
allele num: 52644
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.46e-1

MQ
type: SiteQuality
SIO_000300: 5.968e1

DP
type: SiteQuality
SIO_000300: 1.559103e6

QD
type: SiteQuality
SIO_000300: 8.4e0

MQRankSum
type: SiteQuality
SIO_000300: -1.01e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.3e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -5.42e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.07e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.2e-2

GenotypeQuality
all individuals: 1250
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19361
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1308
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2309
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 620
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4333
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 169
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8181
bin: 9.75e1
variant carriers: 18

GenotypeQuality
all individuals: 12450
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 419
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 512
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 325
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 718
bin: 1.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5168
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6666
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7402
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 704
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 52644
num of homozygotes: 0

South Asian
type: Population
allele count: 18
allele frequency: 1.400342305896997e-3
allele num: 12854
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7754
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 5.07e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.42e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.01e-1

MQ
type: SiteQuality
SIO_000300: 5.968e1

QD
type: SiteQuality
SIO_000300: 8.4e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.46e-1

DP
type: SiteQuality
SIO_000300: 1.559103e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.2e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.3e-3

GenotypeQuality
all individuals: 827
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 19468
bin: 2.25e1
variant carriers: 1

GenotypeQuality
all individuals: 661
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4371
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 406
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 380
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1231
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 521
bin: 9.25e1
variant carriers: 2

GenotypeQuality
all individuals: 324
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 622
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 517
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 972
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1251
bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 56
allele frequency: 1.063223846591988e-3
allele num: 52670
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5184
num of homozygotes: 0

Latino
type: Population
allele count: 8
allele frequency: 1.031193606599639e-3
allele num: 7758
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6676
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12860
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7386
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 700
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.85e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.12e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.387e0

VQSLOD
type: SiteQuality
SIO_000300: 4.89e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.9e-3

DP
type: SiteQuality
SIO_000300: 1.557122e6

MQRankSum
type: SiteQuality
SIO_000300: 3.6e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.279e1

GenotypeQuality
all individuals: 5002
bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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bin: 7.75e1
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GenotypeQuality
all individuals: 753
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1149
bin: 6.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 690
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 51702
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7278
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5076
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7492
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6544
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.865345288658172e-5
allele num: 12714
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.858e0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.38e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.1e-3

MQRankSum
type: SiteQuality
SIO_000300: 2.75e0

QD
type: SiteQuality
SIO_000300: 1.437e1

FS
type: SiteQuality
SIO_000300: 6.521e0

MQ
type: SiteQuality
SIO_000300: 5.92e1

DP
type: SiteQuality
SIO_000300: 1.515603e6

VQSLOD
type: SiteQuality
SIO_000300: -5.609e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.56e0

GenotypeQuality
all individuals: 815
bin: 5.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
all individuals: 1033
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GenotypeQuality
all individuals: 477
bin: 5.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5034
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 682
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.394700139470014e-4
allele num: 7170
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7298
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6414
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12616
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 51110
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.49202e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.073e0

MQRankSum
type: SiteQuality
SIO_000300: 7.79e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.6e-3

VQSLOD
type: SiteQuality
SIO_000300: 2.54e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.72e0

QD
type: SiteQuality
SIO_000300: 1.014e1

MQ
type: SiteQuality
SIO_000300: 6.026e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.59e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 520
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variant carriers: 0

GenotypeQuality
all individuals: 8170
bin: 9.75e1
variant carriers: 2

African
type: Population
allele count: 2
allele frequency: 2.79876854184159e-4
allele num: 7146
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7252
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5002
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12610
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 50952
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6362
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 686
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 7.0e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.29e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.39e-1

FS
type: SiteQuality
SIO_000300: 7.38e0

VQSLOD
type: SiteQuality
SIO_000300: -3.082e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.1e-3

DP
type: SiteQuality
SIO_000300: 1.49275e6

BaseQRankSum
type: SiteQuality
SIO_000300: 3.66e0

QD
type: SiteQuality
SIO_000300: 1.557e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 5029
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 941
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 517
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7196
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7128
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4988
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.97013278694984e-5
allele num: 50758
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6282
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.964319847085059e-5
allele num: 12556
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 680
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.809e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.7e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -1.736e0

VQSLOD
type: SiteQuality
SIO_000300: 2.76e0

DP
type: SiteQuality
SIO_000300: 1.490975e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.29e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 5.03e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.54e-1

GenotypeQuality
all individuals: 2492
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 582
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 551
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variant carriers: 0

GenotypeQuality
all individuals: 267
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13202
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6382
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.888788153520701e-5
allele num: 52944
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7490
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 706
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5422
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.945e0

MQRankSum
type: SiteQuality
SIO_000300: -1.77e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.47e0

FS
type: SiteQuality
SIO_000300: 6.286e0

VQSLOD
type: SiteQuality
SIO_000300: 1.54e0

MQ
type: SiteQuality
SIO_000300: 6.063e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.2e-3

QD
type: SiteQuality
SIO_000300: 1.218e1

DP
type: SiteQuality
SIO_000300: 1.185823e6

ClippingRankSum
type: SiteQuality
SIO_000300: -7.66e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 3187
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variant carriers: 0

GenotypeQuality
all individuals: 6029
bin: 3.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 716
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13168
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5430
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.332267519317879e-4
allele num: 7506
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 53310
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7694
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6436
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.43e-1

FS
type: SiteQuality
SIO_000300: 3.424e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.5e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.25e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.17e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.87e-1

VQSLOD
type: SiteQuality
SIO_000300: -3.366e-1

DP
type: SiteQuality
SIO_000300: 1.182396e6

QD
type: SiteQuality
SIO_000300: 7.79e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 1067
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variant carriers: 0

GenotypeQuality
all individuals: 1200
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5430
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13120
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6444
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7524
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.616431187859759e-4
allele num: 7644
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 716
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 53302
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.12e-1

DP
type: SiteQuality
SIO_000300: 1.182733e6

VQSLOD
type: SiteQuality
SIO_000300: 1.11e0

FS
type: SiteQuality
SIO_000300: 3.187e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.6e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.754e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.8e-3

MQ
type: SiteQuality
SIO_000300: 5.906e1

QD
type: SiteQuality
SIO_000300: 1.172e1

MQRankSum
type: SiteQuality
SIO_000300: 1.43e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 3125
bin: 4.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13010
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5414
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7516
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 696
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6414
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.882955486932289e-5
allele num: 53108
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.35e-1

QD
type: SiteQuality
SIO_000300: 2.304e1

DP
type: SiteQuality
SIO_000300: 1.178507e6

MQRankSum
type: SiteQuality
SIO_000300: 8.070000000000001e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.21e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.8e-3

VQSLOD
type: SiteQuality
SIO_000300: -1.34e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.076e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
all individuals: 362
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GenotypeQuality
all individuals: 174
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variant carriers: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.633453119895459e-4
allele num: 12244
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5490
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 53758
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7686
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 714
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6570
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7756
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.876e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.3e-3

FS
type: SiteQuality
SIO_000300: 1.3088e1

VQSLOD
type: SiteQuality
SIO_000300: -1.691e0

DP
type: SiteQuality
SIO_000300: 1.202386e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 8.0e-2

QD
type: SiteQuality
SIO_000300: 1.057e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.25e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.65e-1

GenotypeQuality
all individuals: 1659
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 239
bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 488
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7101
bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1650
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 373
bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 704
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7796
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7722
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5536
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.852057636033633e-5
allele num: 53994
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12264
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.21184e6

FS
type: SiteQuality
SIO_000300: 6.117e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.586e0

MQRankSum
type: SiteQuality
SIO_000300: 3.4e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.039e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -1.916e0

QD
type: SiteQuality
SIO_000300: 5.48e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.8e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.93e0

GenotypeQuality
all individuals: 565
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1198
bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 216
bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 515
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variant carriers: 0

GenotypeQuality
all individuals: 883
bin: 5.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7910
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.665833749791771e-4
allele num: 12006
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6744
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 722
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8014
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 55020
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5626
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.38e0

VQSLOD
type: SiteQuality
SIO_000300: -7.145e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.4e-3

FS
type: SiteQuality
SIO_000300: 7.386e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.58e-1

DP
type: SiteQuality
SIO_000300: 1.263579e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.54e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.8e0

QD
type: SiteQuality
SIO_000300: 1.705e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 1966
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13965
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 580
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variant carriers: 0

GenotypeQuality
all individuals: 4293
bin: 3.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.775252973548731e-5
allele num: 56330
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8392
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8086
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6982
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 744
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12110
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5736
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.44e0

MQ
type: SiteQuality
SIO_000300: 5.883e1

VQSLOD
type: SiteQuality
SIO_000300: -1.999e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.3e-3

MQRankSum
type: SiteQuality
SIO_000300: -6.35e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.57e0

DP
type: SiteQuality
SIO_000300: 1.314443e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.63e-1

QD
type: SiteQuality
SIO_000300: 7.22e0

GenotypeQuality
all individuals: 11762
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 233
bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 3

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 95
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variant carriers: 0

GenotypeQuality
all individuals: 175
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8372
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5956
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7426
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.419037199124726e-5
allele num: 58496
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12142
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9148
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 766
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.308e0

QD
type: SiteQuality
SIO_000300: 1.19e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.763e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.21e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.04e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.27e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.02e0

DP
type: SiteQuality
SIO_000300: 1.389328e6

GenotypeQuality
all individuals: 254
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 596
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 53
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variant carriers: 0

GenotypeQuality
all individuals: 757
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2206
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variant carriers: 0

GenotypeQuality
all individuals: 2429
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 3762
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 11101
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 176
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9334
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 774
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8430
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.692333728211203e-5
allele num: 59090
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7544
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12110
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6024
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 7.01e0

MQ
type: SiteQuality
SIO_000300: 5.855e1

ClippingRankSum
type: SiteQuality
SIO_000300: 9.88e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

DP
type: SiteQuality
SIO_000300: 1.40659e6

MQRankSum
type: SiteQuality
SIO_000300: 1.52e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.06e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -2.186e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.06e-1

GenotypeQuality
all individuals: 268
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1279
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variant carriers: 0

GenotypeQuality
all individuals: 258
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GenotypeQuality
all individuals: 599
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variant carriers: 0

GenotypeQuality
all individuals: 8467
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variant carriers: 0

GenotypeQuality
all individuals: 230
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 392
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variant carriers: 0

GenotypeQuality
all individuals: 3765
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 116
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 455
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variant carriers: 0

GenotypeQuality
all individuals: 659
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38009
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 419
bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 786
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6264
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7982
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8754
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12226
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.250446936453763e-5
allele num: 61530
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 9.786651008025054e-5
allele num: 10218
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.49e0

DP
type: SiteQuality
SIO_000300: 1.475376e6

VQSLOD
type: SiteQuality
SIO_000300: -1.6e-3

MQRankSum
type: SiteQuality
SIO_000300: 7.099999999999999e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -5.02e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.12e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-3

QD
type: SiteQuality
SIO_000300: 9.69e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.95e-1

MQ
type: SiteQuality
SIO_000300: 5.899e1

GenotypeQuality
all individuals: 462
bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 191
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variant carriers: 0

GenotypeQuality
all individuals: 272
bin: 4.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 798
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.607355257659048e-5
allele num: 62214
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6318
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8158
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 8.235875473562839e-5
allele num: 12142
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10502
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8892
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 9.6e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.494267e6

MQRankSum
type: SiteQuality
SIO_000300: 5.8e-2

VQSLOD
type: SiteQuality
SIO_000300: -7.219e-1

QD
type: SiteQuality
SIO_000300: 7.58e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 2.89e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.97e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.92e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 604
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GenotypeQuality
all individuals: 441
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GenotypeQuality
all individuals: 697
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GenotypeQuality
all individuals: 195
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GenotypeQuality
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GenotypeQuality
all individuals: 462
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variant carriers: 0

GenotypeQuality
all individuals: 2745
bin: 6.75e1
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GenotypeQuality
all individuals: 312
bin: 4.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8166
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11650
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6324
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 9.487666034155598e-5
allele num: 10540
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8902
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 784
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62052
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.184e1

DP
type: SiteQuality
SIO_000300: 1.48711e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.16e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 5.97e-1

FS
type: SiteQuality
SIO_000300: 8.24e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.65e-1

MQ
type: SiteQuality
SIO_000300: 5.922e1

VQSLOD
type: SiteQuality
SIO_000300: 8.34e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.826e0

GenotypeQuality
all individuals: 972
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 433
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variant carriers: 0

GenotypeQuality
all individuals: 8574
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GenotypeQuality
all individuals: 700
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GenotypeQuality
all individuals: 423
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GenotypeQuality
all individuals: 123
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variant carriers: 0

GenotypeQuality
all individuals: 264
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GenotypeQuality
all individuals: 690
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variant carriers: 0

GenotypeQuality
all individuals: 49
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GenotypeQuality
all individuals: 1082
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 258
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 178
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10540
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11644
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.123848055742864e-4
allele num: 8898
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8164
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6324
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62070
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 780
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 7.61e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.28e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.24e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.209e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -9.16e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.3e-2

DP
type: SiteQuality
SIO_000300: 1.487268e6

QD
type: SiteQuality
SIO_000300: 1.201e1

MQ
type: SiteQuality
SIO_000300: 5.896e1

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
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GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9731
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 199
bin: 4.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 61564
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6282
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 774
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8770
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8100
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 9.580379383023568e-5
allele num: 10438
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11124
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.5e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 1.19e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.5e0

MQ
type: SiteQuality
SIO_000300: 5.79e1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 8.140000000000001e0

MQRankSum
type: SiteQuality
SIO_000300: 5.53e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.169999999999999e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.201e0

DP
type: SiteQuality
SIO_000300: 1.460196e6

GenotypeQuality
all individuals: 752
bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
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GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2551
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1396
bin: 3.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10990
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.254678600488202e-5
allele num: 61450
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8094
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8734
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10422
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 768
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6258
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.74e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 4.23e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.8e-3

QD
type: SiteQuality
SIO_000300: 1.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.517e0

VQSLOD
type: SiteQuality
SIO_000300: -1.653e0

FS
type: SiteQuality
SIO_000300: 1.2215e1

DP
type: SiteQuality
SIO_000300: 1.459695e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.09e-1

GenotypeQuality
all individuals: 1773
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1719
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 950
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variant carriers: 0

GenotypeQuality
all individuals: 389
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 217
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 250
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 302
bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
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GenotypeQuality
all individuals: 34507
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 256
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 169
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 378
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 180
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 623
bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 9
allele frequency: 1.473091528086945e-4
allele num: 61096
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8692
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8038
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10364
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.605136436597111e-4
allele num: 6230
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10652
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 760
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.432e1

MQ
type: SiteQuality
SIO_000300: 5.925e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.1e-3

VQSLOD
type: SiteQuality
SIO_000300: 1.98e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.63e-1

FS
type: SiteQuality
SIO_000300: 1.129e0

DP
type: SiteQuality
SIO_000300: 1.436293e6

MQRankSum
type: SiteQuality
SIO_000300: 2.96e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.79e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.29e-1

GenotypeQuality
all individuals: 1271
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12108
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1375
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GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 373
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variant carriers: 0

GenotypeQuality
all individuals: 2769
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 256
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GenotypeQuality
all individuals: 30536
bin: 6.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 736
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9976
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.260716086737267e-4
allele num: 7932
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.164144353899884e-4
allele num: 8590
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6176
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10202
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 60348
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.378e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.360000000000001e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.97e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.55e0

VQSLOD
type: SiteQuality
SIO_000300: 1.7e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.54e-1

DP
type: SiteQuality
SIO_000300: 1.390752e6

FS
type: SiteQuality
SIO_000300: 4.268e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.8e-3

MQ
type: SiteQuality
SIO_000300: 6.078e1

GenotypeQuality
all individuals: 3759
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 490
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
all individuals: 423
bin: 5.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 4500
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variant carriers: 0

GenotypeQuality
all individuals: 13117
bin: 2.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6136
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8500
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7840
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 9.932459276916965e-5
allele num: 10068
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9306
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 59654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 724
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.63e0

MQRankSum
type: SiteQuality
SIO_000300: 1.11e0

VQSLOD
type: SiteQuality
SIO_000300: -8.235e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.32633e6

ClippingRankSum
type: SiteQuality
SIO_000300: -4.57e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.18e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.5e-3

QD
type: SiteQuality
SIO_000300: 1.857e1

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2462
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GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 166
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 525
bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8530
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7734
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.701780061944794e-5
allele num: 58762
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 706
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8378
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6066
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 6.972e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.5e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 2.98e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.08e0

DP
type: SiteQuality
SIO_000300: 1.252354e6

QD
type: SiteQuality
SIO_000300: 6.75e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.17e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -2.06e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.095e0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 299
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variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 166
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 449
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variant carriers: 0

GenotypeQuality
all individuals: 3759
bin: 9.75e1
variant carriers: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9834
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8350
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6036
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7702
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.711918375731845e-5
allele num: 58414
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8338
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 700
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.11e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.165e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 1.89e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.1e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -6.199e-1

QD
type: SiteQuality
SIO_000300: 9.970000000000001e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.33e-1

DP
type: SiteQuality
SIO_000300: 1.231517e6