1-193038155-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 193038155
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 193038155
    reference: chr 1
allele count: 2
allele frequency: 1.798561151079137e-5
allele num: 111200
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356413
  ensembl transcript: ENST00000367443
  gene symbol: TROVE2
  hgvsc: ENST00000367443.1:c.-21-9T>A
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356411
  ensembl transcript: ENST00000367441
  gene symbol: TROVE2
  hgvsc: ENST00000367441.1:c.-30T>A
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl transcript: ENST00000460715
  gene symbol: TROVE2
  hgvsc: ENST00000460715.2:n.155-7476T>A
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356416
  ensembl transcript: ENST00000367446
  gene symbol: TROVE2
  hgvsc: ENST00000367446.3:c.-21-9T>A
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000425296
  ensembl transcript: ENST00000506303
  gene symbol: TROVE2
  hgvsc: ENST00000506303.1:c.-21-9T>A
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356415
  ensembl transcript: ENST00000367445
  gene symbol: TROVE2
  hgvsc: ENST00000367445.3:c.-21-9T>A
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000401176
  ensembl transcript: ENST00000415442
  gene symbol: TROVE2
  hgvsc: ENST00000415442.2:c.-21-9T>A
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000383752
  ensembl transcript: ENST00000400968
  gene symbol: TROVE2
  hgvsc: ENST00000400968.2:c.-21-9T>A
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356414
  ensembl transcript: ENST00000367444
  gene symbol: TROVE2
  hgvsc: ENST00000367444.3:c.-21-9T>A
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000472298
  ensembl transcript: ENST00000432079
  gene symbol: TROVE2
  hgvsc: ENST00000432079.1:c.-245-6795T>A
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000411421
  ensembl transcript: ENST00000416058
  gene symbol: TROVE2
  hgvsc: ENST00000416058.2:c.-846-9T>A
  variant of: http://identifiers.org/hgnc/11313
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12036
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4494
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24556
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1576
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 764
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4920
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2626
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7642
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 131
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: Other
population: European (Finnish)
population: Latino
population: African
population: European (Non-Finnish)
reference allele: T
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: MQ

1-193038158-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 193038158
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 193038158
    reference: chr 1
allele count: 3
allele frequency: 2.682931191758035e-5
allele num: 111818
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000411421
  ensembl transcript: ENST00000416058
  gene symbol: TROVE2
  hgvsc: ENST00000416058.2:c.-846-6T>C
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000425296
  ensembl transcript: ENST00000506303
  gene symbol: TROVE2
  hgvsc: ENST00000506303.1:c.-21-6T>C
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356413
  ensembl transcript: ENST00000367443
  gene symbol: TROVE2
  hgvsc: ENST00000367443.1:c.-21-6T>C
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000472298
  ensembl transcript: ENST00000432079
  gene symbol: TROVE2
  hgvsc: ENST00000432079.1:c.-245-6792T>C
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356411
  ensembl transcript: ENST00000367441
  gene symbol: TROVE2
  hgvsc: ENST00000367441.1:c.-27T>C
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356416
  ensembl transcript: ENST00000367446
  gene symbol: TROVE2
  hgvsc: ENST00000367446.3:c.-21-6T>C
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl transcript: ENST00000460715
  gene symbol: TROVE2
  hgvsc: ENST00000460715.2:n.155-7473T>C
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356414
  ensembl transcript: ENST00000367444
  gene symbol: TROVE2
  hgvsc: ENST00000367444.3:c.-21-6T>C
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000401176
  ensembl transcript: ENST00000415442
  gene symbol: TROVE2
  hgvsc: ENST00000415442.2:c.-21-6T>C
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356415
  ensembl transcript: ENST00000367445
  gene symbol: TROVE2
  hgvsc: ENST00000367445.3:c.-21-6T>C
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000383752
  ensembl transcript: ENST00000400968
  gene symbol: TROVE2
  hgvsc: ENST00000400968.2:c.-21-6T>C
  variant of: http://identifiers.org/hgnc/11313
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6325
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1920
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26237
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4260
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5034
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12522
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1589
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 764
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.-21-6T>C
num of homozygotes: 0
population: African
population: South Asian
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: T
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum

http://identifiers.org/exac.variant/1-193038176-C-CA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 193038176
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 193038177
    reference: chr 1
allele count: 46
allele frequency: 4.869579945799458e-4
allele num: 94464
alternate allele: CA
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000472298
  ensembl transcript: ENST00000432079
  gene symbol: TROVE2
  hgvsc: ENST00000432079.1:c.-245-6765dupA
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356416
  ensembl transcript: ENST00000367446
  gene symbol: TROVE2
  hgvsc: ENST00000367446.3:c.1dupA
  hgvsp: ENSP00000356416.3:p.Met1?
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356411
  ensembl transcript: ENST00000367441
  gene symbol: TROVE2
  hgvsc: ENST00000367441.1:c.1dupA
  hgvsp: ENSP00000356411.1:p.Met1?
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000425296
  ensembl transcript: ENST00000506303
  gene symbol: TROVE2
  hgvsc: ENST00000506303.1:c.1dupA
  hgvsp: ENSP00000425296.1:p.Met1?
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356415
  ensembl transcript: ENST00000367445
  gene symbol: TROVE2
  hgvsc: ENST00000367445.3:c.1dupA
  hgvsp: ENSP00000356415.3:p.Met1?
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000411421
  ensembl transcript: ENST00000416058
  gene symbol: TROVE2
  hgvsc: ENST00000416058.2:c.-825dupA
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356413
  ensembl transcript: ENST00000367443
  gene symbol: TROVE2
  hgvsc: ENST00000367443.1:c.1dupA
  hgvsp: ENSP00000356413.1:p.Met1?
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356414
  ensembl transcript: ENST00000367444
  gene symbol: TROVE2
  hgvsc: ENST00000367444.3:c.1dupA
  hgvsp: ENSP00000356414.3:p.Met1?
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl transcript: ENST00000460715
  gene symbol: TROVE2
  hgvsc: ENST00000460715.2:n.155-7446dupA
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000401176
  ensembl transcript: ENST00000415442
  gene symbol: TROVE2
  hgvsc: ENST00000415442.2:c.1dupA
  hgvsp: ENSP00000401176.2:p.Met1?
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000383752
  ensembl transcript: ENST00000400968
  gene symbol: TROVE2
  hgvsc: ENST00000400968.2:c.1dupA
  hgvsp: ENSP00000383752.2:p.Met1?
  variant of: http://identifiers.org/hgnc/11313
canonical: true
consequence: 5' UTR
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 849
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2374
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1082
  bin: 1.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 4507
  bin: 3.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 1097
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1844
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7655
  bin: 3.25e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 892
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17544
  bin: 2.25e1
  variant carriers: 41
genotype depth: GenotypeDepth
  all individuals: 4135
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3247
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 724
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Met1?
num of homozygotes: 0
population: South Asian
population: African
population: European (Finnish)
population: Latino
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD

http://identifiers.org/exac.variant/1-193038176-CA-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 193038176
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 193038175
    reference: chr 1
allele count: 839
allele frequency: 8.881690379403794e-3
allele num: 94464
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356416
  ensembl transcript: ENST00000367446
  gene symbol: TROVE2
  hgvsc: ENST00000367446.3:c.1delA
  hgvsp: ENSP00000356416.3:p.Met1?
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000401176
  ensembl transcript: ENST00000415442
  gene symbol: TROVE2
  hgvsc: ENST00000415442.2:c.1delA
  hgvsp: ENSP00000401176.2:p.Met1?
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl transcript: ENST00000460715
  gene symbol: TROVE2
  hgvsc: ENST00000460715.2:n.155-7446delA
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000383752
  ensembl transcript: ENST00000400968
  gene symbol: TROVE2
  hgvsc: ENST00000400968.2:c.1delA
  hgvsp: ENSP00000383752.2:p.Met1?
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356415
  ensembl transcript: ENST00000367445
  gene symbol: TROVE2
  hgvsc: ENST00000367445.3:c.1delA
  hgvsp: ENSP00000356415.3:p.Met1?
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000411421
  ensembl transcript: ENST00000416058
  gene symbol: TROVE2
  hgvsc: ENST00000416058.2:c.-825delA
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356413
  ensembl transcript: ENST00000367443
  gene symbol: TROVE2
  hgvsc: ENST00000367443.1:c.1delA
  hgvsp: ENSP00000356413.1:p.Met1?
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000425296
  ensembl transcript: ENST00000506303
  gene symbol: TROVE2
  hgvsc: ENST00000506303.1:c.1delA
  hgvsp: ENSP00000425296.1:p.Met1?
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000472298
  ensembl transcript: ENST00000432079
  gene symbol: TROVE2
  hgvsc: ENST00000432079.1:c.-245-6765delA
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356414
  ensembl transcript: ENST00000367444
  gene symbol: TROVE2
  hgvsc: ENST00000367444.3:c.1delA
  hgvsp: ENSP00000356414.3:p.Met1?
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356411
  ensembl transcript: ENST00000367441
  gene symbol: TROVE2
  hgvsc: ENST00000367441.1:c.1delA
  hgvsp: ENSP00000356411.1:p.Met1?
  variant of: http://identifiers.org/hgnc/11313
canonical: true
consequence: 5' UTR
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 892
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1082
  bin: 1.75e1
  variant carriers: 49
genotype depth: GenotypeDepth
  all individuals: 1097
  bin: 6.25e1
  variant carriers: 32
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 8.25e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 8.75e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 9.25e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 3247
  bin: 4.75e1
  variant carriers: 83
genotype depth: GenotypeDepth
  all individuals: 849
  bin: 1.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 7655
  bin: 3.25e1
  variant carriers: 210
genotype depth: GenotypeDepth
  all individuals: 1844
  bin: 5.75e1
  variant carriers: 45
genotype depth: GenotypeDepth
  all individuals: 4135
  bin: 4.25e1
  variant carriers: 115
genotype depth: GenotypeDepth
  all individuals: 724
  bin: 6.75e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 17544
  bin: 2.25e1
  variant carriers: 132
genotype depth: GenotypeDepth
  all individuals: 4507
  bin: 3.75e1
  variant carriers: 228
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 7.75e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 12803
  bin: 2.75e1
  variant carriers: 281
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 7.25e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 2374
  bin: 5.25e1
  variant carriers: 49
genotype quality: GenotypeQuality
hgvs: p.Met1?
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Latino
population: East Asian
population: Other
population: European (Non-Finnish)
population: African
reference allele: CA
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD

1-193038184-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 193038184
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 193038184
    reference: chr 1
allele count: 3
allele frequency: 2.501375756666166e-5
allele num: 119934
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356413
  ensembl transcript: ENST00000367443
  gene symbol: TROVE2
  hgvsc: ENST00000367443.1:c.-1A>T
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000401176
  ensembl transcript: ENST00000415442
  gene symbol: TROVE2
  hgvsc: ENST00000415442.2:c.-1A>T
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356414
  ensembl transcript: ENST00000367444
  gene symbol: TROVE2
  hgvsc: ENST00000367444.3:c.-1A>T
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000472298
  ensembl transcript: ENST00000432079
  gene symbol: TROVE2
  hgvsc: ENST00000432079.1:c.-245-6766A>T
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000383752
  ensembl transcript: ENST00000400968
  gene symbol: TROVE2
  hgvsc: ENST00000400968.2:c.-1A>T
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356411
  ensembl transcript: ENST00000367441
  gene symbol: TROVE2
  hgvsc: ENST00000367441.1:c.-1A>T
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000411421
  ensembl transcript: ENST00000416058
  gene symbol: TROVE2
  hgvsc: ENST00000416058.2:c.-826A>T
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000425296
  ensembl transcript: ENST00000506303
  gene symbol: TROVE2
  hgvsc: ENST00000506303.1:c.-1A>T
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356415
  ensembl transcript: ENST00000367445
  gene symbol: TROVE2
  hgvsc: ENST00000367445.3:c.-1A>T
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl transcript: ENST00000460715
  gene symbol: TROVE2
  hgvsc: ENST00000460715.2:n.155-7447A>T
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356416
  ensembl transcript: ENST00000367446
  gene symbol: TROVE2
  hgvsc: ENST00000367446.3:c.-1A>T
  variant of: http://identifiers.org/hgnc/11313
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 822
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20311
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2417
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23153
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 556
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11036
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Latino
population: South Asian
population: Other
population: East Asian
reference allele: A
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum

1-193038185-AT-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 193038185
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 193038184
    reference: chr 1
allele count: 4
allele frequency: 3.333722267597886e-5
allele num: 119986
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000411421
  ensembl transcript: ENST00000416058
  gene symbol: TROVE2
  hgvsc: ENST00000416058.2:c.-824delT
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: true
  consequence: start_lost
  consequence: frameshift_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356416
  ensembl transcript: ENST00000367446
  gene symbol: TROVE2
  hgvsc: ENST00000367446.3:c.2delT
  hgvsp: ENSP00000356416.3:p.Met1?
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: start_lost
  consequence: frameshift_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000401176
  ensembl transcript: ENST00000415442
  gene symbol: TROVE2
  hgvsc: ENST00000415442.2:c.2delT
  hgvsp: ENSP00000401176.2:p.Met1?
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: start_lost
  consequence: frameshift_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000425296
  ensembl transcript: ENST00000506303
  gene symbol: TROVE2
  hgvsc: ENST00000506303.1:c.2delT
  hgvsp: ENSP00000425296.1:p.Met1?
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000472298
  ensembl transcript: ENST00000432079
  gene symbol: TROVE2
  hgvsc: ENST00000432079.1:c.-245-6764delT
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: start_lost
  consequence: frameshift_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356414
  ensembl transcript: ENST00000367444
  gene symbol: TROVE2
  hgvsc: ENST00000367444.3:c.2delT
  hgvsp: ENSP00000356414.3:p.Met1?
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: start_lost
  consequence: frameshift_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356411
  ensembl transcript: ENST00000367441
  gene symbol: TROVE2
  hgvsc: ENST00000367441.1:c.2delT
  hgvsp: ENSP00000356411.1:p.Met1?
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl transcript: ENST00000460715
  gene symbol: TROVE2
  hgvsc: ENST00000460715.2:n.155-7445delT
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: start_lost
  consequence: frameshift_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356415
  ensembl transcript: ENST00000367445
  gene symbol: TROVE2
  hgvsc: ENST00000367445.3:c.2delT
  hgvsp: ENSP00000356415.3:p.Met1?
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: start_lost
  consequence: frameshift_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356413
  ensembl transcript: ENST00000367443
  gene symbol: TROVE2
  hgvsc: ENST00000367443.1:c.2delT
  hgvsp: ENSP00000356413.1:p.Met1?
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: start_lost
  consequence: frameshift_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000383752
  ensembl transcript: ENST00000400968
  gene symbol: TROVE2
  hgvsc: ENST00000400968.2:c.2delT
  hgvsp: ENSP00000383752.2:p.Met1?
  variant of: http://identifiers.org/hgnc/11313
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 823
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 502
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11054
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2415
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23190
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20394
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Met1?
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Finnish)
population: East Asian
population: Other
population: European (Non-Finnish)
population: African
reference allele: AT
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum

1-193038186-TGGA-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 193038186
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 193038183
    reference: chr 1
allele count: 3
allele frequency: 2.499666711105186e-5
allele num: 120016
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356413
  ensembl transcript: ENST00000367443
  gene symbol: TROVE2
  hgvsc: ENST00000367443.1:c.6_8delGGA
  hgvsp: ENSP00000356413.1:p.Glu3del
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: true
  consequence: inframe_deletion
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356416
  ensembl transcript: ENST00000367446
  gene symbol: TROVE2
  hgvsc: ENST00000367446.3:c.6_8delGGA
  hgvsp: ENSP00000356416.3:p.Glu3del
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000411421
  ensembl transcript: ENST00000416058
  gene symbol: TROVE2
  hgvsc: ENST00000416058.2:c.-820_-818delGGA
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356415
  ensembl transcript: ENST00000367445
  gene symbol: TROVE2
  hgvsc: ENST00000367445.3:c.6_8delGGA
  hgvsp: ENSP00000356415.3:p.Glu3del
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000401176
  ensembl transcript: ENST00000415442
  gene symbol: TROVE2
  hgvsc: ENST00000415442.2:c.6_8delGGA
  hgvsp: ENSP00000401176.2:p.Glu3del
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000383752
  ensembl transcript: ENST00000400968
  gene symbol: TROVE2
  hgvsc: ENST00000400968.2:c.6_8delGGA
  hgvsp: ENSP00000383752.2:p.Glu3del
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356411
  ensembl transcript: ENST00000367441
  gene symbol: TROVE2
  hgvsc: ENST00000367441.1:c.6_8delGGA
  hgvsp: ENSP00000356411.1:p.Glu3del
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356414
  ensembl transcript: ENST00000367444
  gene symbol: TROVE2
  hgvsc: ENST00000367444.3:c.6_8delGGA
  hgvsp: ENSP00000356414.3:p.Glu3del
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl transcript: ENST00000460715
  gene symbol: TROVE2
  hgvsc: ENST00000460715.2:n.155-7441_155-7439delGGA
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000472298
  ensembl transcript: ENST00000432079
  gene symbol: TROVE2
  hgvsc: ENST00000432079.1:c.-245-6760_-245-6758delGGA
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000425296
  ensembl transcript: ENST00000506303
  gene symbol: TROVE2
  hgvsc: ENST00000506303.1:c.6_8delGGA
  hgvsp: ENSP00000425296.1:p.Glu3del
  variant of: http://identifiers.org/hgnc/11313
canonical: true
consequence: inframe deletion
filter: VQSRTrancheINDEL95.00to96.00
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20394
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23238
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11072
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 826
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu3del
num of homozygotes: 0
population: South Asian
population: Latino
population: African
population: European (Finnish)
population: Other
population: East Asian
population: European (Non-Finnish)
reference allele: TGGA
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: BaseQRankSum

1-193038190-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 193038190
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 193038190
    reference: chr 1
allele count: 1
allele frequency: 8.315040244794785e-6
allele num: 120264
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000383752
  ensembl transcript: ENST00000400968
  gene symbol: TROVE2
  hgvsc: ENST00000400968.2:c.6G>A
  hgvsp: ENST00000400968.2:c.6G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000425296
  ensembl transcript: ENST00000506303
  gene symbol: TROVE2
  hgvsc: ENST00000506303.1:c.6G>A
  hgvsp: ENST00000506303.1:c.6G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356416
  ensembl transcript: ENST00000367446
  gene symbol: TROVE2
  hgvsc: ENST00000367446.3:c.6G>A
  hgvsp: ENST00000367446.3:c.6G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356415
  ensembl transcript: ENST00000367445
  gene symbol: TROVE2
  hgvsc: ENST00000367445.3:c.6G>A
  hgvsp: ENST00000367445.3:c.6G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000401176
  ensembl transcript: ENST00000415442
  gene symbol: TROVE2
  hgvsc: ENST00000415442.2:c.6G>A
  hgvsp: ENST00000415442.2:c.6G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356413
  ensembl transcript: ENST00000367443
  gene symbol: TROVE2
  hgvsc: ENST00000367443.1:c.6G>A
  hgvsp: ENST00000367443.1:c.6G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356411
  ensembl transcript: ENST00000367441
  gene symbol: TROVE2
  hgvsc: ENST00000367441.1:c.6G>A
  hgvsp: ENST00000367441.1:c.6G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl transcript: ENST00000460715
  gene symbol: TROVE2
  hgvsc: ENST00000460715.2:n.155-7441G>A
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356414
  ensembl transcript: ENST00000367444
  gene symbol: TROVE2
  hgvsc: ENST00000367444.3:c.6G>A
  hgvsp: ENST00000367444.3:c.6G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000472298
  ensembl transcript: ENST00000432079
  gene symbol: TROVE2
  hgvsc: ENST00000432079.1:c.-245-6760G>A
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000411421
  ensembl transcript: ENST00000416058
  gene symbol: TROVE2
  hgvsc: ENST00000416058.2:c.-820G>A
  variant of: http://identifiers.org/hgnc/11313
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20564
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2400
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23415
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11071
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu2Glu
num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: Other
population: European (Non-Finnish)
population: South Asian
population: East Asian
reference allele: G
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: QD

1-193038190-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 193038190
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 193038190
    reference: chr 1
allele count: 19
allele frequency: 1.579857646511009e-4
allele num: 120264
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356413
  ensembl transcript: ENST00000367443
  gene symbol: TROVE2
  hgvsc: ENST00000367443.1:c.6G>C
  hgvsp: ENSP00000356413.1:p.Glu2Asp
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356415
  ensembl transcript: ENST00000367445
  gene symbol: TROVE2
  hgvsc: ENST00000367445.3:c.6G>C
  hgvsp: ENSP00000356415.3:p.Glu2Asp
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356411
  ensembl transcript: ENST00000367441
  gene symbol: TROVE2
  hgvsc: ENST00000367441.1:c.6G>C
  hgvsp: ENSP00000356411.1:p.Glu2Asp
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000411421
  ensembl transcript: ENST00000416058
  gene symbol: TROVE2
  hgvsc: ENST00000416058.2:c.-820G>C
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000401176
  ensembl transcript: ENST00000415442
  gene symbol: TROVE2
  hgvsc: ENST00000415442.2:c.6G>C
  hgvsp: ENSP00000401176.2:p.Glu2Asp
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000425296
  ensembl transcript: ENST00000506303
  gene symbol: TROVE2
  hgvsc: ENST00000506303.1:c.6G>C
  hgvsp: ENSP00000425296.1:p.Glu2Asp
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356416
  ensembl transcript: ENST00000367446
  gene symbol: TROVE2
  hgvsc: ENST00000367446.3:c.6G>C
  hgvsp: ENSP00000356416.3:p.Glu2Asp
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000472298
  ensembl transcript: ENST00000432079
  gene symbol: TROVE2
  hgvsc: ENST00000432079.1:c.-245-6760G>C
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000383752
  ensembl transcript: ENST00000400968
  gene symbol: TROVE2
  hgvsc: ENST00000400968.2:c.6G>C
  hgvsp: ENSP00000383752.2:p.Glu2Asp
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356414
  ensembl transcript: ENST00000367444
  gene symbol: TROVE2
  hgvsc: ENST00000367444.3:c.6G>C
  hgvsp: ENSP00000356414.3:p.Glu2Asp
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl transcript: ENST00000460715
  gene symbol: TROVE2
  hgvsc: ENST00000460715.2:n.155-7441G>C
  variant of: http://identifiers.org/hgnc/11313
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 20564
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 4.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 824
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23415
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11071
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2400
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu2Asp
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: East Asian
population: South Asian
population: Other
population: European (Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: DP

1-193038191-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 193038191
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 193038191
    reference: chr 1
allele count: 1
allele frequency: 8.311999202048076e-6
allele num: 120308
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000411421
  ensembl transcript: ENST00000416058
  gene symbol: TROVE2
  hgvsc: ENST00000416058.2:c.-819G>A
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356415
  ensembl transcript: ENST00000367445
  gene symbol: TROVE2
  hgvsc: ENST00000367445.3:c.7G>A
  hgvsp: ENSP00000356415.3:p.Glu3Lys
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356411
  ensembl transcript: ENST00000367441
  gene symbol: TROVE2
  hgvsc: ENST00000367441.1:c.7G>A
  hgvsp: ENSP00000356411.1:p.Glu3Lys
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356416
  ensembl transcript: ENST00000367446
  gene symbol: TROVE2
  hgvsc: ENST00000367446.3:c.7G>A
  hgvsp: ENSP00000356416.3:p.Glu3Lys
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl transcript: ENST00000460715
  gene symbol: TROVE2
  hgvsc: ENST00000460715.2:n.155-7440G>A
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000383752
  ensembl transcript: ENST00000400968
  gene symbol: TROVE2
  hgvsc: ENST00000400968.2:c.7G>A
  hgvsp: ENSP00000383752.2:p.Glu3Lys
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356414
  ensembl transcript: ENST00000367444
  gene symbol: TROVE2
  hgvsc: ENST00000367444.3:c.7G>A
  hgvsp: ENSP00000356414.3:p.Glu3Lys
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000425296
  ensembl transcript: ENST00000506303
  gene symbol: TROVE2
  hgvsc: ENST00000506303.1:c.7G>A
  hgvsp: ENSP00000425296.1:p.Glu3Lys
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000401176
  ensembl transcript: ENST00000415442
  gene symbol: TROVE2
  hgvsc: ENST00000415442.2:c.7G>A
  hgvsp: ENSP00000401176.2:p.Glu3Lys
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356413
  ensembl transcript: ENST00000367443
  gene symbol: TROVE2
  hgvsc: ENST00000367443.1:c.7G>A
  hgvsp: ENSP00000356413.1:p.Glu3Lys
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000472298
  ensembl transcript: ENST00000432079
  gene symbol: TROVE2
  hgvsc: ENST00000432079.1:c.-245-6759G>A
  variant of: http://identifiers.org/hgnc/11313
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11079
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23471
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20608
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 816
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2398
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu3Lys
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: Other
population: African
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP

1-193038196-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 193038196
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 193038196
    reference: chr 1
allele count: 1
allele frequency: 8.300132802124834e-6
allele num: 120480
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl transcript: ENST00000460715
  gene symbol: TROVE2
  hgvsc: ENST00000460715.2:n.155-7435T>C
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000472298
  ensembl transcript: ENST00000432079
  gene symbol: TROVE2
  hgvsc: ENST00000432079.1:c.-245-6754T>C
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356415
  ensembl transcript: ENST00000367445
  gene symbol: TROVE2
  hgvsc: ENST00000367445.3:c.12T>C
  hgvsp: ENST00000367445.3:c.12T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356413
  ensembl transcript: ENST00000367443
  gene symbol: TROVE2
  hgvsc: ENST00000367443.1:c.12T>C
  hgvsp: ENST00000367443.1:c.12T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000401176
  ensembl transcript: ENST00000415442
  gene symbol: TROVE2
  hgvsc: ENST00000415442.2:c.12T>C
  hgvsp: ENST00000415442.2:c.12T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356411
  ensembl transcript: ENST00000367441
  gene symbol: TROVE2
  hgvsc: ENST00000367441.1:c.12T>C
  hgvsp: ENST00000367441.1:c.12T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000383752
  ensembl transcript: ENST00000400968
  gene symbol: TROVE2
  hgvsc: ENST00000400968.2:c.12T>C
  hgvsp: ENST00000400968.2:c.12T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356414
  ensembl transcript: ENST00000367444
  gene symbol: TROVE2
  hgvsc: ENST00000367444.3:c.12T>C
  hgvsp: ENST00000367444.3:c.12T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000411421
  ensembl transcript: ENST00000416058
  gene symbol: TROVE2
  hgvsc: ENST00000416058.2:c.-814T>C
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356416
  ensembl transcript: ENST00000367446
  gene symbol: TROVE2
  hgvsc: ENST00000367446.3:c.12T>C
  hgvsp: ENST00000367446.3:c.12T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000425296
  ensembl transcript: ENST00000506303
  gene symbol: TROVE2
  hgvsc: ENST00000506303.1:c.12T>C
  hgvsp: ENST00000506303.1:c.12T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11313
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2400
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11082
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23581
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20807
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser4Ser
num of homozygotes: 0
population: East Asian
population: African
population: Other
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: T
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: DP

1-193038214-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 193038214
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 193038214
    reference: chr 1
allele count: 3
allele frequency: 2.485336514564072e-5
allele num: 120708
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356411
  ensembl transcript: ENST00000367441
  gene symbol: TROVE2
  hgvsc: ENST00000367441.1:c.30A>G
  hgvsp: ENST00000367441.1:c.30A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356413
  ensembl transcript: ENST00000367443
  gene symbol: TROVE2
  hgvsc: ENST00000367443.1:c.30A>G
  hgvsp: ENST00000367443.1:c.30A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356415
  ensembl transcript: ENST00000367445
  gene symbol: TROVE2
  hgvsc: ENST00000367445.3:c.30A>G
  hgvsp: ENST00000367445.3:c.30A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000401176
  ensembl transcript: ENST00000415442
  gene symbol: TROVE2
  hgvsc: ENST00000415442.2:c.30A>G
  hgvsp: ENST00000415442.2:c.30A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000472298
  ensembl transcript: ENST00000432079
  gene symbol: TROVE2
  hgvsc: ENST00000432079.1:c.-245-6736A>G
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356416
  ensembl transcript: ENST00000367446
  gene symbol: TROVE2
  hgvsc: ENST00000367446.3:c.30A>G
  hgvsp: ENST00000367446.3:c.30A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000425296
  ensembl transcript: ENST00000506303
  gene symbol: TROVE2
  hgvsc: ENST00000506303.1:c.30A>G
  hgvsp: ENST00000506303.1:c.30A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356414
  ensembl transcript: ENST00000367444
  gene symbol: TROVE2
  hgvsc: ENST00000367444.3:c.30A>G
  hgvsp: ENST00000367444.3:c.30A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000383752
  ensembl transcript: ENST00000400968
  gene symbol: TROVE2
  hgvsc: ENST00000400968.2:c.30A>G
  hgvsp: ENST00000400968.2:c.30A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000411421
  ensembl transcript: ENST00000416058
  gene symbol: TROVE2
  hgvsc: ENST00000416058.2:c.-796A>G
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl transcript: ENST00000460715
  gene symbol: TROVE2
  hgvsc: ENST00000460715.2:n.155-7417A>G
  variant of: http://identifiers.org/hgnc/11313
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 816
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2395
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23873
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11130
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20791
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro10Pro
num of homozygotes: 0
population: Other
population: African
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
population: East Asian
reference allele: A
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ

1-193038215-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 193038215
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 193038215
    reference: chr 1
allele count: 1
allele frequency: 8.284180528862085e-6
allele num: 120712
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl transcript: ENST00000460715
  gene symbol: TROVE2
  hgvsc: ENST00000460715.2:n.155-7416C>T
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356416
  ensembl transcript: ENST00000367446
  gene symbol: TROVE2
  hgvsc: ENST00000367446.3:c.31C>T
  hgvsp: ENST00000367446.3:c.31C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000401176
  ensembl transcript: ENST00000415442
  gene symbol: TROVE2
  hgvsc: ENST00000415442.2:c.31C>T
  hgvsp: ENST00000415442.2:c.31C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000383752
  ensembl transcript: ENST00000400968
  gene symbol: TROVE2
  hgvsc: ENST00000400968.2:c.31C>T
  hgvsp: ENST00000400968.2:c.31C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356411
  ensembl transcript: ENST00000367441
  gene symbol: TROVE2
  hgvsc: ENST00000367441.1:c.31C>T
  hgvsp: ENST00000367441.1:c.31C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356415
  ensembl transcript: ENST00000367445
  gene symbol: TROVE2
  hgvsc: ENST00000367445.3:c.31C>T
  hgvsp: ENST00000367445.3:c.31C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000472298
  ensembl transcript: ENST00000432079
  gene symbol: TROVE2
  hgvsc: ENST00000432079.1:c.-245-6735C>T
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000425296
  ensembl transcript: ENST00000506303
  gene symbol: TROVE2
  hgvsc: ENST00000506303.1:c.31C>T
  hgvsp: ENST00000506303.1:c.31C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356414
  ensembl transcript: ENST00000367444
  gene symbol: TROVE2
  hgvsc: ENST00000367444.3:c.31C>T
  hgvsp: ENST00000367444.3:c.31C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000411421
  ensembl transcript: ENST00000416058
  gene symbol: TROVE2
  hgvsc: ENST00000416058.2:c.-795C>T
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356413
  ensembl transcript: ENST00000367443
  gene symbol: TROVE2
  hgvsc: ENST00000367443.1:c.31C>T
  hgvsp: ENST00000367443.1:c.31C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11313
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11137
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2398
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20787
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23874
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 814
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu11Leu
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Finnish)
population: African
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP

1-193038227-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 193038227
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 193038227
    reference: chr 1
allele count: 1
allele frequency: 8.281985026171072e-6
allele num: 120744
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356414
  ensembl transcript: ENST00000367444
  gene symbol: TROVE2
  hgvsc: ENST00000367444.3:c.43C>G
  hgvsp: ENSP00000356414.3:p.Gln15Glu
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356411
  ensembl transcript: ENST00000367441
  gene symbol: TROVE2
  hgvsc: ENST00000367441.1:c.43C>G
  hgvsp: ENSP00000356411.1:p.Gln15Glu
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356416
  ensembl transcript: ENST00000367446
  gene symbol: TROVE2
  hgvsc: ENST00000367446.3:c.43C>G
  hgvsp: ENSP00000356416.3:p.Gln15Glu
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000472298
  ensembl transcript: ENST00000432079
  gene symbol: TROVE2
  hgvsc: ENST00000432079.1:c.-245-6723C>G
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356413
  ensembl transcript: ENST00000367443
  gene symbol: TROVE2
  hgvsc: ENST00000367443.1:c.43C>G
  hgvsp: ENSP00000356413.1:p.Gln15Glu
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000383752
  ensembl transcript: ENST00000400968
  gene symbol: TROVE2
  hgvsc: ENST00000400968.2:c.43C>G
  hgvsp: ENSP00000383752.2:p.Gln15Glu
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356415
  ensembl transcript: ENST00000367445
  gene symbol: TROVE2
  hgvsc: ENST00000367445.3:c.43C>G
  hgvsp: ENSP00000356415.3:p.Gln15Glu
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000411421
  ensembl transcript: ENST00000416058
  gene symbol: TROVE2
  hgvsc: ENST00000416058.2:c.-783C>G
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl transcript: ENST00000460715
  gene symbol: TROVE2
  hgvsc: ENST00000460715.2:n.155-7404C>G
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000401176
  ensembl transcript: ENST00000415442
  gene symbol: TROVE2
  hgvsc: ENST00000415442.2:c.43C>G
  hgvsp: ENSP00000401176.2:p.Gln15Glu
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000425296
  ensembl transcript: ENST00000506303
  gene symbol: TROVE2
  hgvsc: ENST00000506303.1:c.43C>G
  hgvsp: ENSP00000425296.1:p.Gln15Glu
  variant of: http://identifiers.org/hgnc/11313
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2396
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11141
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20777
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23930
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 817
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gln15Glu
num of homozygotes: 0
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Other
population: South Asian
population: Latino
reference allele: C
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD

1-193038233-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 193038233
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 193038233
    reference: chr 1
allele count: 1
allele frequency: 8.281436332317477e-6
allele num: 120752
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000383752
  ensembl transcript: ENST00000400968
  gene symbol: TROVE2
  hgvsc: ENST00000400968.2:c.49G>A
  hgvsp: ENSP00000383752.2:p.Ala17Thr
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000411421
  ensembl transcript: ENST00000416058
  gene symbol: TROVE2
  hgvsc: ENST00000416058.2:c.-777G>A
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356413
  ensembl transcript: ENST00000367443
  gene symbol: TROVE2
  hgvsc: ENST00000367443.1:c.49G>A
  hgvsp: ENSP00000356413.1:p.Ala17Thr
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000401176
  ensembl transcript: ENST00000415442
  gene symbol: TROVE2
  hgvsc: ENST00000415442.2:c.49G>A
  hgvsp: ENSP00000401176.2:p.Ala17Thr
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356416
  ensembl transcript: ENST00000367446
  gene symbol: TROVE2
  hgvsc: ENST00000367446.3:c.49G>A
  hgvsp: ENSP00000356416.3:p.Ala17Thr
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000472298
  ensembl transcript: ENST00000432079
  gene symbol: TROVE2
  hgvsc: ENST00000432079.1:c.-245-6717G>A
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000425296
  ensembl transcript: ENST00000506303
  gene symbol: TROVE2
  hgvsc: ENST00000506303.1:c.49G>A
  hgvsp: ENSP00000425296.1:p.Ala17Thr
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356414
  ensembl transcript: ENST00000367444
  gene symbol: TROVE2
  hgvsc: ENST00000367444.3:c.49G>A
  hgvsp: ENSP00000356414.3:p.Ala17Thr
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356415
  ensembl transcript: ENST00000367445
  gene symbol: TROVE2
  hgvsc: ENST00000367445.3:c.49G>A
  hgvsp: ENSP00000356415.3:p.Ala17Thr
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl transcript: ENST00000460715
  gene symbol: TROVE2
  hgvsc: ENST00000460715.2:n.155-7398G>A
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356411
  ensembl transcript: ENST00000367441
  gene symbol: TROVE2
  hgvsc: ENST00000367441.1:c.49G>A
  hgvsp: ENSP00000356411.1:p.Ala17Thr
  variant of: http://identifiers.org/hgnc/11313
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2396
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20776
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23950
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11141
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 814
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala17Thr
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: DP

1-193038237-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 193038237
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 193038237
    reference: chr 1
allele count: 1
allele frequency: 8.281162012653616e-6
allele num: 120756
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356413
  ensembl transcript: ENST00000367443
  gene symbol: TROVE2
  hgvsc: ENST00000367443.1:c.53A>G
  hgvsp: ENSP00000356413.1:p.Asn18Ser
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl transcript: ENST00000460715
  gene symbol: TROVE2
  hgvsc: ENST00000460715.2:n.155-7394A>G
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000411421
  ensembl transcript: ENST00000416058
  gene symbol: TROVE2
  hgvsc: ENST00000416058.2:c.-773A>G
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000383752
  ensembl transcript: ENST00000400968
  gene symbol: TROVE2
  hgvsc: ENST00000400968.2:c.53A>G
  hgvsp: ENSP00000383752.2:p.Asn18Ser
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356414
  ensembl transcript: ENST00000367444
  gene symbol: TROVE2
  hgvsc: ENST00000367444.3:c.53A>G
  hgvsp: ENSP00000356414.3:p.Asn18Ser
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000472298
  ensembl transcript: ENST00000432079
  gene symbol: TROVE2
  hgvsc: ENST00000432079.1:c.-245-6713A>G
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356415
  ensembl transcript: ENST00000367445
  gene symbol: TROVE2
  hgvsc: ENST00000367445.3:c.53A>G
  hgvsp: ENSP00000356415.3:p.Asn18Ser
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000401176
  ensembl transcript: ENST00000415442
  gene symbol: TROVE2
  hgvsc: ENST00000415442.2:c.53A>G
  hgvsp: ENSP00000401176.2:p.Asn18Ser
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000425296
  ensembl transcript: ENST00000506303
  gene symbol: TROVE2
  hgvsc: ENST00000506303.1:c.53A>G
  hgvsp: ENSP00000425296.1:p.Asn18Ser
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356411
  ensembl transcript: ENST00000367441
  gene symbol: TROVE2
  hgvsc: ENST00000367441.1:c.53A>G
  hgvsp: ENSP00000356411.1:p.Asn18Ser
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356416
  ensembl transcript: ENST00000367446
  gene symbol: TROVE2
  hgvsc: ENST00000367446.3:c.53A>G
  hgvsp: ENSP00000356416.3:p.Asn18Ser
  variant of: http://identifiers.org/hgnc/11313
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 813
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20769
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2398
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23958
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11145
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asn18Ser
num of homozygotes: 0
population: East Asian
population: African
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP

1-193038246-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 193038246
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 193038246
    reference: chr 1
allele count: 1
allele frequency: 8.280613427842734e-6
allele num: 120764
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000472298
  ensembl transcript: ENST00000432079
  gene symbol: TROVE2
  hgvsc: ENST00000432079.1:c.-245-6704A>T
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356416
  ensembl transcript: ENST00000367446
  gene symbol: TROVE2
  hgvsc: ENST00000367446.3:c.62A>T
  hgvsp: ENSP00000356416.3:p.Asp21Val
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000425296
  ensembl transcript: ENST00000506303
  gene symbol: TROVE2
  hgvsc: ENST00000506303.1:c.62A>T
  hgvsp: ENSP00000425296.1:p.Asp21Val
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl transcript: ENST00000460715
  gene symbol: TROVE2
  hgvsc: ENST00000460715.2:n.155-7385A>T
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000411421
  ensembl transcript: ENST00000416058
  gene symbol: TROVE2
  hgvsc: ENST00000416058.2:c.-764A>T
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000401176
  ensembl transcript: ENST00000415442
  gene symbol: TROVE2
  hgvsc: ENST00000415442.2:c.62A>T
  hgvsp: ENSP00000401176.2:p.Asp21Val
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356414
  ensembl transcript: ENST00000367444
  gene symbol: TROVE2
  hgvsc: ENST00000367444.3:c.62A>T
  hgvsp: ENSP00000356414.3:p.Asp21Val
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356413
  ensembl transcript: ENST00000367443
  gene symbol: TROVE2
  hgvsc: ENST00000367443.1:c.62A>T
  hgvsp: ENSP00000356413.1:p.Asp21Val
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356415
  ensembl transcript: ENST00000367445
  gene symbol: TROVE2
  hgvsc: ENST00000367445.3:c.62A>T
  hgvsp: ENSP00000356415.3:p.Asp21Val
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356411
  ensembl transcript: ENST00000367441
  gene symbol: TROVE2
  hgvsc: ENST00000367441.1:c.62A>T
  hgvsp: ENSP00000356411.1:p.Asp21Val
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000383752
  ensembl transcript: ENST00000400968
  gene symbol: TROVE2
  hgvsc: ENST00000400968.2:c.62A>T
  hgvsp: ENSP00000383752.2:p.Asp21Val
  variant of: http://identifiers.org/hgnc/11313
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20761
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 813
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23969
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11149
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2399
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asp21Val
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff

1-193038251-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 193038251
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 193038251
    reference: chr 1
allele count: 2
allele frequency: 1.656095258599275e-5
allele num: 120766
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356415
  ensembl transcript: ENST00000367445
  gene symbol: TROVE2
  hgvsc: ENST00000367445.3:c.67T>G
  hgvsp: ENSP00000356415.3:p.Tyr23Asp
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356413
  ensembl transcript: ENST00000367443
  gene symbol: TROVE2
  hgvsc: ENST00000367443.1:c.67T>G
  hgvsp: ENSP00000356413.1:p.Tyr23Asp
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356411
  ensembl transcript: ENST00000367441
  gene symbol: TROVE2
  hgvsc: ENST00000367441.1:c.67T>G
  hgvsp: ENSP00000356411.1:p.Tyr23Asp
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000383752
  ensembl transcript: ENST00000400968
  gene symbol: TROVE2
  hgvsc: ENST00000400968.2:c.67T>G
  hgvsp: ENSP00000383752.2:p.Tyr23Asp
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000411421
  ensembl transcript: ENST00000416058
  gene symbol: TROVE2
  hgvsc: ENST00000416058.2:c.-759T>G
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000401176
  ensembl transcript: ENST00000415442
  gene symbol: TROVE2
  hgvsc: ENST00000415442.2:c.67T>G
  hgvsp: ENSP00000401176.2:p.Tyr23Asp
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000472298
  ensembl transcript: ENST00000432079
  gene symbol: TROVE2
  hgvsc: ENST00000432079.1:c.-245-6699T>G
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000425296
  ensembl transcript: ENST00000506303
  gene symbol: TROVE2
  hgvsc: ENST00000506303.1:c.67T>G
  hgvsp: ENSP00000425296.1:p.Tyr23Asp
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl transcript: ENST00000460715
  gene symbol: TROVE2
  hgvsc: ENST00000460715.2:n.155-7380T>G
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356416
  ensembl transcript: ENST00000367446
  gene symbol: TROVE2
  hgvsc: ENST00000367446.3:c.67T>G
  hgvsp: ENSP00000356416.3:p.Tyr23Asp
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356414
  ensembl transcript: ENST00000367444
  gene symbol: TROVE2
  hgvsc: ENST00000367444.3:c.67T>G
  hgvsp: ENSP00000356414.3:p.Tyr23Asp
  variant of: http://identifiers.org/hgnc/11313
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23971
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 813
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20753
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11154
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2398
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
hgvs: p.Tyr23Asp
num of homozygotes: 0
population: European (Finnish)
population: African
population: South Asian
population: Latino
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: T
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: QD

1-193038252-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 193038252
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 193038252
    reference: chr 1
allele count: 1
allele frequency: 8.280476292996373e-6
allele num: 120766
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000472298
  ensembl transcript: ENST00000432079
  gene symbol: TROVE2
  hgvsc: ENST00000432079.1:c.-245-6698A>G
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356413
  ensembl transcript: ENST00000367443
  gene symbol: TROVE2
  hgvsc: ENST00000367443.1:c.68A>G
  hgvsp: ENSP00000356413.1:p.Tyr23Cys
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl transcript: ENST00000460715
  gene symbol: TROVE2
  hgvsc: ENST00000460715.2:n.155-7379A>G
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356411
  ensembl transcript: ENST00000367441
  gene symbol: TROVE2
  hgvsc: ENST00000367441.1:c.68A>G
  hgvsp: ENSP00000356411.1:p.Tyr23Cys
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356415
  ensembl transcript: ENST00000367445
  gene symbol: TROVE2
  hgvsc: ENST00000367445.3:c.68A>G
  hgvsp: ENSP00000356415.3:p.Tyr23Cys
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000401176
  ensembl transcript: ENST00000415442
  gene symbol: TROVE2
  hgvsc: ENST00000415442.2:c.68A>G
  hgvsp: ENSP00000401176.2:p.Tyr23Cys
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356414
  ensembl transcript: ENST00000367444
  gene symbol: TROVE2
  hgvsc: ENST00000367444.3:c.68A>G
  hgvsp: ENSP00000356414.3:p.Tyr23Cys
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000383752
  ensembl transcript: ENST00000400968
  gene symbol: TROVE2
  hgvsc: ENST00000400968.2:c.68A>G
  hgvsp: ENSP00000383752.2:p.Tyr23Cys
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000425296
  ensembl transcript: ENST00000506303
  gene symbol: TROVE2
  hgvsc: ENST00000506303.1:c.68A>G
  hgvsp: ENSP00000425296.1:p.Tyr23Cys
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000411421
  ensembl transcript: ENST00000416058
  gene symbol: TROVE2
  hgvsc: ENST00000416058.2:c.-758A>G
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356416
  ensembl transcript: ENST00000367446
  gene symbol: TROVE2
  hgvsc: ENST00000367446.3:c.68A>G
  hgvsp: ENSP00000356416.3:p.Tyr23Cys
  variant of: http://identifiers.org/hgnc/11313
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11155
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23972
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2397
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 813
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20753
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Tyr23Cys
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Other
population: African
population: East Asian
population: European (Finnish)
population: Latino
reference allele: A
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: DP

1-193038253-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 193038253
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 193038253
    reference: chr 1
allele count: 1
allele frequency: 8.280476292996373e-6
allele num: 120766
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000411421
  ensembl transcript: ENST00000416058
  gene symbol: TROVE2
  hgvsc: ENST00000416058.2:c.-757T>C
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000425296
  ensembl transcript: ENST00000506303
  gene symbol: TROVE2
  hgvsc: ENST00000506303.1:c.69T>C
  hgvsp: ENST00000506303.1:c.69T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356414
  ensembl transcript: ENST00000367444
  gene symbol: TROVE2
  hgvsc: ENST00000367444.3:c.69T>C
  hgvsp: ENST00000367444.3:c.69T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl transcript: ENST00000460715
  gene symbol: TROVE2
  hgvsc: ENST00000460715.2:n.155-7378T>C
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356411
  ensembl transcript: ENST00000367441
  gene symbol: TROVE2
  hgvsc: ENST00000367441.1:c.69T>C
  hgvsp: ENST00000367441.1:c.69T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356415
  ensembl transcript: ENST00000367445
  gene symbol: TROVE2
  hgvsc: ENST00000367445.3:c.69T>C
  hgvsp: ENST00000367445.3:c.69T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356416
  ensembl transcript: ENST00000367446
  gene symbol: TROVE2
  hgvsc: ENST00000367446.3:c.69T>C
  hgvsp: ENST00000367446.3:c.69T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000401176
  ensembl transcript: ENST00000415442
  gene symbol: TROVE2
  hgvsc: ENST00000415442.2:c.69T>C
  hgvsp: ENST00000415442.2:c.69T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356413
  ensembl transcript: ENST00000367443
  gene symbol: TROVE2
  hgvsc: ENST00000367443.1:c.69T>C
  hgvsp: ENST00000367443.1:c.69T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000472298
  ensembl transcript: ENST00000432079
  gene symbol: TROVE2
  hgvsc: ENST00000432079.1:c.-245-6697T>C
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000383752
  ensembl transcript: ENST00000400968
  gene symbol: TROVE2
  hgvsc: ENST00000400968.2:c.69T>C
  hgvsp: ENST00000400968.2:c.69T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11313
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11154
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23975
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2397
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 813
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20752
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Tyr23Tyr
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: African
population: South Asian
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: T
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQ

1-193038254-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 193038254
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 193038254
    reference: chr 1
allele count: 3
allele frequency: 2.484142887898912e-5
allele num: 120766
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356415
  ensembl transcript: ENST00000367445
  gene symbol: TROVE2
  hgvsc: ENST00000367445.3:c.70G>A
  hgvsp: ENSP00000356415.3:p.Val24Ile
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000383752
  ensembl transcript: ENST00000400968
  gene symbol: TROVE2
  hgvsc: ENST00000400968.2:c.70G>A
  hgvsp: ENSP00000383752.2:p.Val24Ile
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356416
  ensembl transcript: ENST00000367446
  gene symbol: TROVE2
  hgvsc: ENST00000367446.3:c.70G>A
  hgvsp: ENSP00000356416.3:p.Val24Ile
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl transcript: ENST00000460715
  gene symbol: TROVE2
  hgvsc: ENST00000460715.2:n.155-7377G>A
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356411
  ensembl transcript: ENST00000367441
  gene symbol: TROVE2
  hgvsc: ENST00000367441.1:c.70G>A
  hgvsp: ENSP00000356411.1:p.Val24Ile
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000472298
  ensembl transcript: ENST00000432079
  gene symbol: TROVE2
  hgvsc: ENST00000432079.1:c.-245-6696G>A
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356413
  ensembl transcript: ENST00000367443
  gene symbol: TROVE2
  hgvsc: ENST00000367443.1:c.70G>A
  hgvsp: ENSP00000356413.1:p.Val24Ile
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000401176
  ensembl transcript: ENST00000415442
  gene symbol: TROVE2
  hgvsc: ENST00000415442.2:c.70G>A
  hgvsp: ENSP00000401176.2:p.Val24Ile
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000411421
  ensembl transcript: ENST00000416058
  gene symbol: TROVE2
  hgvsc: ENST00000416058.2:c.-756G>A
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000425296
  ensembl transcript: ENST00000506303
  gene symbol: TROVE2
  hgvsc: ENST00000506303.1:c.70G>A
  hgvsp: ENSP00000425296.1:p.Val24Ile
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356414
  ensembl transcript: ENST00000367444
  gene symbol: TROVE2
  hgvsc: ENST00000367444.3:c.70G>A
  hgvsp: ENSP00000356414.3:p.Val24Ile
  variant of: http://identifiers.org/hgnc/11313
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2395
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23975
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20748
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11156
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 816
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Val24Ile
num of homozygotes: 0
population: African
population: Other
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD

1-193038269-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 193038269
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 193038269
    reference: chr 1
allele count: 1
allele frequency: 8.280476292996373e-6
allele num: 120766
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356411
  ensembl transcript: ENST00000367441
  gene symbol: TROVE2
  hgvsc: ENST00000367441.1:c.85G>C
  hgvsp: ENSP00000356411.1:p.Asp29His
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356415
  ensembl transcript: ENST00000367445
  gene symbol: TROVE2
  hgvsc: ENST00000367445.3:c.85G>C
  hgvsp: ENSP00000356415.3:p.Asp29His
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000411421
  ensembl transcript: ENST00000416058
  gene symbol: TROVE2
  hgvsc: ENST00000416058.2:c.-741G>C
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356413
  ensembl transcript: ENST00000367443
  gene symbol: TROVE2
  hgvsc: ENST00000367443.1:c.85G>C
  hgvsp: ENSP00000356413.1:p.Asp29His
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000401176
  ensembl transcript: ENST00000415442
  gene symbol: TROVE2
  hgvsc: ENST00000415442.2:c.85G>C
  hgvsp: ENSP00000401176.2:p.Asp29His
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356414
  ensembl transcript: ENST00000367444
  gene symbol: TROVE2
  hgvsc: ENST00000367444.3:c.85G>C
  hgvsp: ENSP00000356414.3:p.Asp29His
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356416
  ensembl transcript: ENST00000367446
  gene symbol: TROVE2
  hgvsc: ENST00000367446.3:c.85G>C
  hgvsp: ENSP00000356416.3:p.Asp29His
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl transcript: ENST00000460715
  gene symbol: TROVE2
  hgvsc: ENST00000460715.2:n.155-7362G>C
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000383752
  ensembl transcript: ENST00000400968
  gene symbol: TROVE2
  hgvsc: ENST00000400968.2:c.85G>C
  hgvsp: ENSP00000383752.2:p.Asp29His
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000472298
  ensembl transcript: ENST00000432079
  gene symbol: TROVE2
  hgvsc: ENST00000432079.1:c.-245-6681G>C
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000425296
  ensembl transcript: ENST00000506303
  gene symbol: TROVE2
  hgvsc: ENST00000506303.1:c.85G>C
  hgvsp: ENSP00000425296.1:p.Asp29His
  variant of: http://identifiers.org/hgnc/11313
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20737
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23986
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2397
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 812
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11153
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asp29His
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: South Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD

1-193038270-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 193038270
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 193038270
    reference: chr 1
allele count: 1
allele frequency: 8.280476292996373e-6
allele num: 120766
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356411
  ensembl transcript: ENST00000367441
  gene symbol: TROVE2
  hgvsc: ENST00000367441.1:c.86A>T
  hgvsp: ENSP00000356411.1:p.Asp29Val
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356416
  ensembl transcript: ENST00000367446
  gene symbol: TROVE2
  hgvsc: ENST00000367446.3:c.86A>T
  hgvsp: ENSP00000356416.3:p.Asp29Val
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000401176
  ensembl transcript: ENST00000415442
  gene symbol: TROVE2
  hgvsc: ENST00000415442.2:c.86A>T
  hgvsp: ENSP00000401176.2:p.Asp29Val
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000472298
  ensembl transcript: ENST00000432079
  gene symbol: TROVE2
  hgvsc: ENST00000432079.1:c.-245-6680A>T
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl transcript: ENST00000460715
  gene symbol: TROVE2
  hgvsc: ENST00000460715.2:n.155-7361A>T
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000383752
  ensembl transcript: ENST00000400968
  gene symbol: TROVE2
  hgvsc: ENST00000400968.2:c.86A>T
  hgvsp: ENSP00000383752.2:p.Asp29Val
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356414
  ensembl transcript: ENST00000367444
  gene symbol: TROVE2
  hgvsc: ENST00000367444.3:c.86A>T
  hgvsp: ENSP00000356414.3:p.Asp29Val
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000425296
  ensembl transcript: ENST00000506303
  gene symbol: TROVE2
  hgvsc: ENST00000506303.1:c.86A>T
  hgvsp: ENSP00000425296.1:p.Asp29Val
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356415
  ensembl transcript: ENST00000367445
  gene symbol: TROVE2
  hgvsc: ENST00000367445.3:c.86A>T
  hgvsp: ENSP00000356415.3:p.Asp29Val
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356413
  ensembl transcript: ENST00000367443
  gene symbol: TROVE2
  hgvsc: ENST00000367443.1:c.86A>T
  hgvsp: ENSP00000356413.1:p.Asp29Val
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000411421
  ensembl transcript: ENST00000416058
  gene symbol: TROVE2
  hgvsc: ENST00000416058.2:c.-740A>T
  variant of: http://identifiers.org/hgnc/11313
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2397
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 812
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11155
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23986
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20736
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asp29Val
num of homozygotes: 0
population: African
population: South Asian
population: East Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
reference allele: A
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: DP

1-193038272-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 193038272
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 193038272
    reference: chr 1
allele count: 1
allele frequency: 8.280476292996373e-6
allele num: 120766
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000401176
  ensembl transcript: ENST00000415442
  gene symbol: TROVE2
  hgvsc: ENST00000415442.2:c.88A>G
  hgvsp: ENSP00000401176.2:p.Met30Val
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000383752
  ensembl transcript: ENST00000400968
  gene symbol: TROVE2
  hgvsc: ENST00000400968.2:c.88A>G
  hgvsp: ENSP00000383752.2:p.Met30Val
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356416
  ensembl transcript: ENST00000367446
  gene symbol: TROVE2
  hgvsc: ENST00000367446.3:c.88A>G
  hgvsp: ENSP00000356416.3:p.Met30Val
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356413
  ensembl transcript: ENST00000367443
  gene symbol: TROVE2
  hgvsc: ENST00000367443.1:c.88A>G
  hgvsp: ENSP00000356413.1:p.Met30Val
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl transcript: ENST00000460715
  gene symbol: TROVE2
  hgvsc: ENST00000460715.2:n.155-7359A>G
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356415
  ensembl transcript: ENST00000367445
  gene symbol: TROVE2
  hgvsc: ENST00000367445.3:c.88A>G
  hgvsp: ENSP00000356415.3:p.Met30Val
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356411
  ensembl transcript: ENST00000367441
  gene symbol: TROVE2
  hgvsc: ENST00000367441.1:c.88A>G
  hgvsp: ENSP00000356411.1:p.Met30Val
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000411421
  ensembl transcript: ENST00000416058
  gene symbol: TROVE2
  hgvsc: ENST00000416058.2:c.-738A>G
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000425296
  ensembl transcript: ENST00000506303
  gene symbol: TROVE2
  hgvsc: ENST00000506303.1:c.88A>G
  hgvsp: ENSP00000425296.1:p.Met30Val
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356414
  ensembl transcript: ENST00000367444
  gene symbol: TROVE2
  hgvsc: ENST00000367444.3:c.88A>G
  hgvsp: ENSP00000356414.3:p.Met30Val
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000472298
  ensembl transcript: ENST00000432079
  gene symbol: TROVE2
  hgvsc: ENST00000432079.1:c.-245-6678A>G
  variant of: http://identifiers.org/hgnc/11313
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 812
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23982
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11157
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2398
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20738
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Met30Val
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Latino
population: South Asian
population: East Asian
reference allele: A
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: DP

1-193038279-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 193038279
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 193038279
    reference: chr 1
allele count: 1
allele frequency: 8.280887711162637e-6
allele num: 120760
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000425296
  ensembl transcript: ENST00000506303
  gene symbol: TROVE2
  hgvsc: ENST00000506303.1:c.95G>A
  hgvsp: ENSP00000425296.1:p.Arg32Gln
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl transcript: ENST00000460715
  gene symbol: TROVE2
  hgvsc: ENST00000460715.2:n.155-7352G>A
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000401176
  ensembl transcript: ENST00000415442
  gene symbol: TROVE2
  hgvsc: ENST00000415442.2:c.95G>A
  hgvsp: ENSP00000401176.2:p.Arg32Gln
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356414
  ensembl transcript: ENST00000367444
  gene symbol: TROVE2
  hgvsc: ENST00000367444.3:c.95G>A
  hgvsp: ENSP00000356414.3:p.Arg32Gln
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000411421
  ensembl transcript: ENST00000416058
  gene symbol: TROVE2
  hgvsc: ENST00000416058.2:c.-731G>A
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000383752
  ensembl transcript: ENST00000400968
  gene symbol: TROVE2
  hgvsc: ENST00000400968.2:c.95G>A
  hgvsp: ENSP00000383752.2:p.Arg32Gln
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356416
  ensembl transcript: ENST00000367446
  gene symbol: TROVE2
  hgvsc: ENST00000367446.3:c.95G>A
  hgvsp: ENSP00000356416.3:p.Arg32Gln
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356415
  ensembl transcript: ENST00000367445
  gene symbol: TROVE2
  hgvsc: ENST00000367445.3:c.95G>A
  hgvsp: ENSP00000356415.3:p.Arg32Gln
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356413
  ensembl transcript: ENST00000367443
  gene symbol: TROVE2
  hgvsc: ENST00000367443.1:c.95G>A
  hgvsp: ENSP00000356413.1:p.Arg32Gln
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000472298
  ensembl transcript: ENST00000432079
  gene symbol: TROVE2
  hgvsc: ENST00000432079.1:c.-245-6671G>A
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356411
  ensembl transcript: ENST00000367441
  gene symbol: TROVE2
  hgvsc: ENST00000367441.1:c.95G>A
  hgvsp: ENSP00000356411.1:p.Arg32Gln
  variant of: http://identifiers.org/hgnc/11313
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2398
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20727
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11158
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23991
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 812
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg32Gln
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: Other
population: African
population: South Asian
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: QD
site quality: ClippingRankSum

1-193038283-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 193038283
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 193038283
    reference: chr 1
allele count: 6
allele frequency: 4.968450340338848e-5
allele num: 120762
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356413
  ensembl transcript: ENST00000367443
  gene symbol: TROVE2
  hgvsc: ENST00000367443.1:c.99A>G
  hgvsp: ENST00000367443.1:c.99A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000425296
  ensembl transcript: ENST00000506303
  gene symbol: TROVE2
  hgvsc: ENST00000506303.1:c.99A>G
  hgvsp: ENST00000506303.1:c.99A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356415
  ensembl transcript: ENST00000367445
  gene symbol: TROVE2
  hgvsc: ENST00000367445.3:c.99A>G
  hgvsp: ENST00000367445.3:c.99A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000383752
  ensembl transcript: ENST00000400968
  gene symbol: TROVE2
  hgvsc: ENST00000400968.2:c.99A>G
  hgvsp: ENST00000400968.2:c.99A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000401176
  ensembl transcript: ENST00000415442
  gene symbol: TROVE2
  hgvsc: ENST00000415442.2:c.99A>G
  hgvsp: ENST00000415442.2:c.99A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356411
  ensembl transcript: ENST00000367441
  gene symbol: TROVE2
  hgvsc: ENST00000367441.1:c.99A>G
  hgvsp: ENST00000367441.1:c.99A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356416
  ensembl transcript: ENST00000367446
  gene symbol: TROVE2
  hgvsc: ENST00000367446.3:c.99A>G
  hgvsp: ENST00000367446.3:c.99A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000472298
  ensembl transcript: ENST00000432079
  gene symbol: TROVE2
  hgvsc: ENST00000432079.1:c.-245-6667A>G
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000411421
  ensembl transcript: ENST00000416058
  gene symbol: TROVE2
  hgvsc: ENST00000416058.2:c.-727A>G
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl transcript: ENST00000460715
  gene symbol: TROVE2
  hgvsc: ENST00000460715.2:n.155-7348A>G
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356414
  ensembl transcript: ENST00000367444
  gene symbol: TROVE2
  hgvsc: ENST00000367444.3:c.99A>G
  hgvsp: ENST00000367444.3:c.99A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11313
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 812
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2398
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23994
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20725
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11156
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu33Leu
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum

1-193038284-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 193038284
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 193038284
    reference: chr 1
allele count: 1
allele frequency: 8.280887711162637e-6
allele num: 120760
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000383752
  ensembl transcript: ENST00000400968
  gene symbol: TROVE2
  hgvsc: ENST00000400968.2:c.100C>T
  hgvsp: ENSP00000383752.2:p.His34Tyr
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356411
  ensembl transcript: ENST00000367441
  gene symbol: TROVE2
  hgvsc: ENST00000367441.1:c.100C>T
  hgvsp: ENSP00000356411.1:p.His34Tyr
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000411421
  ensembl transcript: ENST00000416058
  gene symbol: TROVE2
  hgvsc: ENST00000416058.2:c.-726C>T
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356413
  ensembl transcript: ENST00000367443
  gene symbol: TROVE2
  hgvsc: ENST00000367443.1:c.100C>T
  hgvsp: ENSP00000356413.1:p.His34Tyr
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000425296
  ensembl transcript: ENST00000506303
  gene symbol: TROVE2
  hgvsc: ENST00000506303.1:c.100C>T
  hgvsp: ENSP00000425296.1:p.His34Tyr
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356416
  ensembl transcript: ENST00000367446
  gene symbol: TROVE2
  hgvsc: ENST00000367446.3:c.100C>T
  hgvsp: ENSP00000356416.3:p.His34Tyr
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl transcript: ENST00000460715
  gene symbol: TROVE2
  hgvsc: ENST00000460715.2:n.155-7347C>T
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000401176
  ensembl transcript: ENST00000415442
  gene symbol: TROVE2
  hgvsc: ENST00000415442.2:c.100C>T
  hgvsp: ENSP00000401176.2:p.His34Tyr
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356415
  ensembl transcript: ENST00000367445
  gene symbol: TROVE2
  hgvsc: ENST00000367445.3:c.100C>T
  hgvsp: ENSP00000356415.3:p.His34Tyr
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356414
  ensembl transcript: ENST00000367444
  gene symbol: TROVE2
  hgvsc: ENST00000367444.3:c.100C>T
  hgvsp: ENSP00000356414.3:p.His34Tyr
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000472298
  ensembl transcript: ENST00000432079
  gene symbol: TROVE2
  hgvsc: ENST00000432079.1:c.-245-6666C>T
  variant of: http://identifiers.org/hgnc/11313
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23997
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 812
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20718
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11161
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2399
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.His34Tyr
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: African
population: European (Finnish)
population: South Asian
population: Latino
population: Other
reference allele: C
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD

1-193038289-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 193038289
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 193038289
    reference: chr 1
allele count: 5
allele frequency: 4.140375283615707e-5
allele num: 120762
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356411
  ensembl transcript: ENST00000367441
  gene symbol: TROVE2
  hgvsc: ENST00000367441.1:c.105G>T
  hgvsp: ENST00000367441.1:c.105G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356415
  ensembl transcript: ENST00000367445
  gene symbol: TROVE2
  hgvsc: ENST00000367445.3:c.105G>T
  hgvsp: ENST00000367445.3:c.105G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356416
  ensembl transcript: ENST00000367446
  gene symbol: TROVE2
  hgvsc: ENST00000367446.3:c.105G>T
  hgvsp: ENST00000367446.3:c.105G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000411421
  ensembl transcript: ENST00000416058
  gene symbol: TROVE2
  hgvsc: ENST00000416058.2:c.-721G>T
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356413
  ensembl transcript: ENST00000367443
  gene symbol: TROVE2
  hgvsc: ENST00000367443.1:c.105G>T
  hgvsp: ENST00000367443.1:c.105G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356414
  ensembl transcript: ENST00000367444
  gene symbol: TROVE2
  hgvsc: ENST00000367444.3:c.105G>T
  hgvsp: ENST00000367444.3:c.105G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl transcript: ENST00000460715
  gene symbol: TROVE2
  hgvsc: ENST00000460715.2:n.155-7342G>T
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000383752
  ensembl transcript: ENST00000400968
  gene symbol: TROVE2
  hgvsc: ENST00000400968.2:c.105G>T
  hgvsp: ENST00000400968.2:c.105G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000401176
  ensembl transcript: ENST00000415442
  gene symbol: TROVE2
  hgvsc: ENST00000415442.2:c.105G>T
  hgvsp: ENST00000415442.2:c.105G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000472298
  ensembl transcript: ENST00000432079
  gene symbol: TROVE2
  hgvsc: ENST00000432079.1:c.-245-6661G>T
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000425296
  ensembl transcript: ENST00000506303
  gene symbol: TROVE2
  hgvsc: ENST00000506303.1:c.105G>T
  hgvsp: ENST00000506303.1:c.105G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11313
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20706
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2405
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11153
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24006
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 814
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg35Arg
num of homozygotes: 0
population: European (Finnish)
population: African
population: Other
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Latino
reference allele: G
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: QD

1-193038301-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 193038301
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 193038301
    reference: chr 1
allele count: 1
allele frequency: 8.280750567231414e-6
allele num: 120762
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356414
  ensembl transcript: ENST00000367444
  gene symbol: TROVE2
  hgvsc: ENST00000367444.3:c.117C>T
  hgvsp: ENST00000367444.3:c.117C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356416
  ensembl transcript: ENST00000367446
  gene symbol: TROVE2
  hgvsc: ENST00000367446.3:c.117C>T
  hgvsp: ENST00000367446.3:c.117C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000411421
  ensembl transcript: ENST00000416058
  gene symbol: TROVE2
  hgvsc: ENST00000416058.2:c.-709C>T
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356413
  ensembl transcript: ENST00000367443
  gene symbol: TROVE2
  hgvsc: ENST00000367443.1:c.117C>T
  hgvsp: ENST00000367443.1:c.117C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000383752
  ensembl transcript: ENST00000400968
  gene symbol: TROVE2
  hgvsc: ENST00000400968.2:c.117C>T
  hgvsp: ENST00000400968.2:c.117C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000401176
  ensembl transcript: ENST00000415442
  gene symbol: TROVE2
  hgvsc: ENST00000415442.2:c.117C>T
  hgvsp: ENST00000415442.2:c.117C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000425296
  ensembl transcript: ENST00000506303
  gene symbol: TROVE2
  hgvsc: ENST00000506303.1:c.117C>T
  hgvsp: ENST00000506303.1:c.117C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356415
  ensembl transcript: ENST00000367445
  gene symbol: TROVE2
  hgvsc: ENST00000367445.3:c.117C>T
  hgvsp: ENST00000367445.3:c.117C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl transcript: ENST00000460715
  gene symbol: TROVE2
  hgvsc: ENST00000460715.2:n.155-7330C>T
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000472298
  ensembl transcript: ENST00000432079
  gene symbol: TROVE2
  hgvsc: ENST00000432079.1:c.-245-6649C>T
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356411
  ensembl transcript: ENST00000367441
  gene symbol: TROVE2
  hgvsc: ENST00000367441.1:c.117C>T
  hgvsp: ENST00000367441.1:c.117C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11313
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 819
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24025
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2406
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20664
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Phe39Phe
num of homozygotes: 0
population: South Asian
population: Other
population: East Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: African
reference allele: C
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD

1-193038318-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 193038318
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 193038318
    reference: chr 1
allele count: 3
allele frequency: 2.484266313348791e-5
allele num: 120760
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356413
  ensembl transcript: ENST00000367443
  gene symbol: TROVE2
  hgvsc: ENST00000367443.1:c.134C>T
  hgvsp: ENSP00000356413.1:p.Thr45Ile
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl transcript: ENST00000460715
  gene symbol: TROVE2
  hgvsc: ENST00000460715.2:n.155-7313C>T
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356416
  ensembl transcript: ENST00000367446
  gene symbol: TROVE2
  hgvsc: ENST00000367446.3:c.134C>T
  hgvsp: ENSP00000356416.3:p.Thr45Ile
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000401176
  ensembl transcript: ENST00000415442
  gene symbol: TROVE2
  hgvsc: ENST00000415442.2:c.127+7C>T
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000411421
  ensembl transcript: ENST00000416058
  gene symbol: TROVE2
  hgvsc: ENST00000416058.2:c.-692C>T
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356415
  ensembl transcript: ENST00000367445
  gene symbol: TROVE2
  hgvsc: ENST00000367445.3:c.134C>T
  hgvsp: ENSP00000356415.3:p.Thr45Ile
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000383752
  ensembl transcript: ENST00000400968
  gene symbol: TROVE2
  hgvsc: ENST00000400968.2:c.134C>T
  hgvsp: ENSP00000383752.2:p.Thr45Ile
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000472298
  ensembl transcript: ENST00000432079
  gene symbol: TROVE2
  hgvsc: ENST00000432079.1:c.-245-6632C>T
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356414
  ensembl transcript: ENST00000367444
  gene symbol: TROVE2
  hgvsc: ENST00000367444.3:c.134C>T
  hgvsp: ENSP00000356414.3:p.Thr45Ile
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356411
  ensembl transcript: ENST00000367441
  gene symbol: TROVE2
  hgvsc: ENST00000367441.1:c.134C>T
  hgvsp: ENSP00000356411.1:p.Thr45Ile
  variant of: http://identifiers.org/hgnc/11313
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24039
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20631
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 815
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11152
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2404
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 378
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Thr45Ile
num of homozygotes: 0
population: African
population: East Asian
population: Other
population: European (Finnish)
population: South Asian
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum

1-193038322-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 193038322
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 193038322
    reference: chr 1
allele count: 2
allele frequency: 1.656204971927326e-5
allele num: 120758
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356411
  ensembl transcript: ENST00000367441
  gene symbol: TROVE2
  hgvsc: ENST00000367441.1:c.138T>C
  hgvsp: ENST00000367441.1:c.138T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356414
  ensembl transcript: ENST00000367444
  gene symbol: TROVE2
  hgvsc: ENST00000367444.3:c.138T>C
  hgvsp: ENST00000367444.3:c.138T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000401176
  ensembl transcript: ENST00000415442
  gene symbol: TROVE2
  hgvsc: ENST00000415442.2:c.127+11T>C
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356415
  ensembl transcript: ENST00000367445
  gene symbol: TROVE2
  hgvsc: ENST00000367445.3:c.138T>C
  hgvsp: ENST00000367445.3:c.138T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl transcript: ENST00000460715
  gene symbol: TROVE2
  hgvsc: ENST00000460715.2:n.155-7309T>C
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356416
  ensembl transcript: ENST00000367446
  gene symbol: TROVE2
  hgvsc: ENST00000367446.3:c.138T>C
  hgvsp: ENST00000367446.3:c.138T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356413
  ensembl transcript: ENST00000367443
  gene symbol: TROVE2
  hgvsc: ENST00000367443.1:c.138T>C
  hgvsp: ENST00000367443.1:c.138T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000411421
  ensembl transcript: ENST00000416058
  gene symbol: TROVE2
  hgvsc: ENST00000416058.2:c.-688T>C
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000383752
  ensembl transcript: ENST00000400968
  gene symbol: TROVE2
  hgvsc: ENST00000400968.2:c.138T>C
  hgvsp: ENST00000400968.2:c.138T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000472298
  ensembl transcript: ENST00000432079
  gene symbol: TROVE2
  hgvsc: ENST00000432079.1:c.-245-6628T>C
  variant of: http://identifiers.org/hgnc/11313
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11157
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2403
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 816
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20625
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24040
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 417
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Tyr46Tyr
num of homozygotes: 0
population: South Asian
population: East Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: African
reference allele: T
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: FS

1-193038324-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 193038324
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 193038324
    reference: chr 1
allele count: 1
allele frequency: 8.280887711162637e-6
allele num: 120760
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl transcript: ENST00000460715
  gene symbol: TROVE2
  hgvsc: ENST00000460715.2:n.155-7307A>T
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356411
  ensembl transcript: ENST00000367441
  gene symbol: TROVE2
  hgvsc: ENST00000367441.1:c.140A>T
  hgvsp: ENSP00000356411.1:p.Tyr47Phe
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356413
  ensembl transcript: ENST00000367443
  gene symbol: TROVE2
  hgvsc: ENST00000367443.1:c.140A>T
  hgvsp: ENSP00000356413.1:p.Tyr47Phe
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356415
  ensembl transcript: ENST00000367445
  gene symbol: TROVE2
  hgvsc: ENST00000367445.3:c.140A>T
  hgvsp: ENSP00000356415.3:p.Tyr47Phe
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356416
  ensembl transcript: ENST00000367446
  gene symbol: TROVE2
  hgvsc: ENST00000367446.3:c.140A>T
  hgvsp: ENSP00000356416.3:p.Tyr47Phe
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000383752
  ensembl transcript: ENST00000400968
  gene symbol: TROVE2
  hgvsc: ENST00000400968.2:c.140A>T
  hgvsp: ENSP00000383752.2:p.Tyr47Phe
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356414
  ensembl transcript: ENST00000367444
  gene symbol: TROVE2
  hgvsc: ENST00000367444.3:c.140A>T
  hgvsp: ENSP00000356414.3:p.Tyr47Phe
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000401176
  ensembl transcript: ENST00000415442
  gene symbol: TROVE2
  hgvsc: ENST00000415442.2:c.127+13A>T
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000472298
  ensembl transcript: ENST00000432079
  gene symbol: TROVE2
  hgvsc: ENST00000432079.1:c.-245-6626A>T
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000411421
  ensembl transcript: ENST00000416058
  gene symbol: TROVE2
  hgvsc: ENST00000416058.2:c.-686A>T
  variant of: http://identifiers.org/hgnc/11313
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11155
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24040
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20628
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2402
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 814
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2018
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Tyr47Phe
num of homozygotes: 0
population: Latino
population: East Asian
population: South Asian
population: African
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: A
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: QD

1-193038325-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 193038325
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 193038325
    reference: chr 1
allele count: 1
allele frequency: 8.281024859636628e-6
allele num: 120758
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000383752
  ensembl transcript: ENST00000400968
  gene symbol: TROVE2
  hgvsc: ENST00000400968.2:c.141T>C
  hgvsp: ENST00000400968.2:c.141T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356411
  ensembl transcript: ENST00000367441
  gene symbol: TROVE2
  hgvsc: ENST00000367441.1:c.141T>C
  hgvsp: ENST00000367441.1:c.141T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000472298
  ensembl transcript: ENST00000432079
  gene symbol: TROVE2
  hgvsc: ENST00000432079.1:c.-245-6625T>C
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356413
  ensembl transcript: ENST00000367443
  gene symbol: TROVE2
  hgvsc: ENST00000367443.1:c.141T>C
  hgvsp: ENST00000367443.1:c.141T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000401176
  ensembl transcript: ENST00000415442
  gene symbol: TROVE2
  hgvsc: ENST00000415442.2:c.127+14T>C
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356415
  ensembl transcript: ENST00000367445
  gene symbol: TROVE2
  hgvsc: ENST00000367445.3:c.141T>C
  hgvsp: ENST00000367445.3:c.141T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356416
  ensembl transcript: ENST00000367446
  gene symbol: TROVE2
  hgvsc: ENST00000367446.3:c.141T>C
  hgvsp: ENST00000367446.3:c.141T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl transcript: ENST00000460715
  gene symbol: TROVE2
  hgvsc: ENST00000460715.2:n.155-7306T>C
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356414
  ensembl transcript: ENST00000367444
  gene symbol: TROVE2
  hgvsc: ENST00000367444.3:c.141T>C
  hgvsp: ENST00000367444.3:c.141T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000411421
  ensembl transcript: ENST00000416058
  gene symbol: TROVE2
  hgvsc: ENST00000416058.2:c.-685T>C
  variant of: http://identifiers.org/hgnc/11313
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 20629
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11152
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 814
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2402
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24043
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Tyr47Tyr
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
population: South Asian
population: Other
population: European (Finnish)
reference allele: T
site quality: QD
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD

1-193038326-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 193038326
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 193038326
    reference: chr 1
allele count: 1
allele frequency: 8.281024859636628e-6
allele num: 120758
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356411
  ensembl transcript: ENST00000367441
  gene symbol: TROVE2
  hgvsc: ENST00000367441.1:c.142A>G
  hgvsp: ENSP00000356411.1:p.Ile48Val
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356413
  ensembl transcript: ENST00000367443
  gene symbol: TROVE2
  hgvsc: ENST00000367443.1:c.142A>G
  hgvsp: ENSP00000356413.1:p.Ile48Val
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl transcript: ENST00000460715
  gene symbol: TROVE2
  hgvsc: ENST00000460715.2:n.155-7305A>G
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356414
  ensembl transcript: ENST00000367444
  gene symbol: TROVE2
  hgvsc: ENST00000367444.3:c.142A>G
  hgvsp: ENSP00000356414.3:p.Ile48Val
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356415
  ensembl transcript: ENST00000367445
  gene symbol: TROVE2
  hgvsc: ENST00000367445.3:c.142A>G
  hgvsp: ENSP00000356415.3:p.Ile48Val
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000383752
  ensembl transcript: ENST00000400968
  gene symbol: TROVE2
  hgvsc: ENST00000400968.2:c.142A>G
  hgvsp: ENSP00000383752.2:p.Ile48Val
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000472298
  ensembl transcript: ENST00000432079
  gene symbol: TROVE2
  hgvsc: ENST00000432079.1:c.-245-6624A>G
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356416
  ensembl transcript: ENST00000367446
  gene symbol: TROVE2
  hgvsc: ENST00000367446.3:c.142A>G
  hgvsp: ENSP00000356416.3:p.Ile48Val
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000401176
  ensembl transcript: ENST00000415442
  gene symbol: TROVE2
  hgvsc: ENST00000415442.2:c.127+15A>G
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000411421
  ensembl transcript: ENST00000416058
  gene symbol: TROVE2
  hgvsc: ENST00000416058.2:c.-684A>G
  variant of: http://identifiers.org/hgnc/11313
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24042
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11156
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2402
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 814
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20625
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Ile48Val
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Other
population: Latino
population: African
population: South Asian
reference allele: A
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: ClippingRankSum

1-193038334-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 193038334
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 193038334
    reference: chr 1
allele count: 3
allele frequency: 2.484430899695243e-5
allele num: 120752
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356413
  ensembl transcript: ENST00000367443
  gene symbol: TROVE2
  hgvsc: ENST00000367443.1:c.150A>G
  hgvsp: ENST00000367443.1:c.150A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356415
  ensembl transcript: ENST00000367445
  gene symbol: TROVE2
  hgvsc: ENST00000367445.3:c.150A>G
  hgvsp: ENST00000367445.3:c.150A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl transcript: ENST00000460715
  gene symbol: TROVE2
  hgvsc: ENST00000460715.2:n.155-7297A>G
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000401176
  ensembl transcript: ENST00000415442
  gene symbol: TROVE2
  hgvsc: ENST00000415442.2:c.127+23A>G
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356411
  ensembl transcript: ENST00000367441
  gene symbol: TROVE2
  hgvsc: ENST00000367441.1:c.150A>G
  hgvsp: ENST00000367441.1:c.150A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356414
  ensembl transcript: ENST00000367444
  gene symbol: TROVE2
  hgvsc: ENST00000367444.3:c.150A>G
  hgvsp: ENST00000367444.3:c.150A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000472298
  ensembl transcript: ENST00000432079
  gene symbol: TROVE2
  hgvsc: ENST00000432079.1:c.-245-6616A>G
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356416
  ensembl transcript: ENST00000367446
  gene symbol: TROVE2
  hgvsc: ENST00000367446.3:c.150A>G
  hgvsp: ENST00000367446.3:c.150A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000411421
  ensembl transcript: ENST00000416058
  gene symbol: TROVE2
  hgvsc: ENST00000416058.2:c.-676A>G
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000383752
  ensembl transcript: ENST00000400968
  gene symbol: TROVE2
  hgvsc: ENST00000400968.2:c.150A>G
  hgvsp: ENST00000400968.2:c.150A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11313
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2399
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20620
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 814
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24049
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11154
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Glu50Glu
num of homozygotes: 0
population: South Asian
population: African
population: East Asian
population: European (Finnish)
population: Other
population: Latino
population: European (Non-Finnish)
reference allele: A
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD

1-193038341-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 193038341
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 193038341
    reference: chr 1
allele count: 9
allele frequency: 7.45329269908573e-5
allele num: 120752
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356415
  ensembl transcript: ENST00000367445
  gene symbol: TROVE2
  hgvsc: ENST00000367445.3:c.157T>A
  hgvsp: ENSP00000356415.3:p.Leu53Met
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000383752
  ensembl transcript: ENST00000400968
  gene symbol: TROVE2
  hgvsc: ENST00000400968.2:c.157T>A
  hgvsp: ENSP00000383752.2:p.Leu53Met
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356414
  ensembl transcript: ENST00000367444
  gene symbol: TROVE2
  hgvsc: ENST00000367444.3:c.157T>A
  hgvsp: ENSP00000356414.3:p.Leu53Met
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356411
  ensembl transcript: ENST00000367441
  gene symbol: TROVE2
  hgvsc: ENST00000367441.1:c.157T>A
  hgvsp: ENSP00000356411.1:p.Leu53Met
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356416
  ensembl transcript: ENST00000367446
  gene symbol: TROVE2
  hgvsc: ENST00000367446.3:c.157T>A
  hgvsp: ENSP00000356416.3:p.Leu53Met
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000472298
  ensembl transcript: ENST00000432079
  gene symbol: TROVE2
  hgvsc: ENST00000432079.1:c.-245-6609T>A
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356413
  ensembl transcript: ENST00000367443
  gene symbol: TROVE2
  hgvsc: ENST00000367443.1:c.157T>A
  hgvsp: ENSP00000356413.1:p.Leu53Met
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl transcript: ENST00000460715
  gene symbol: TROVE2
  hgvsc: ENST00000460715.2:n.155-7290T>A
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000411421
  ensembl transcript: ENST00000416058
  gene symbol: TROVE2
  hgvsc: ENST00000416058.2:c.-669T>A
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000401176
  ensembl transcript: ENST00000415442
  gene symbol: TROVE2
  hgvsc: ENST00000415442.2:c.127+30T>A
  variant of: http://identifiers.org/hgnc/11313
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 20604
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 814
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2398
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24054
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11155
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Leu53Met
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: Other
population: African
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: T
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: BaseQRankSum

1-193038341-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 193038341
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 193038341
    reference: chr 1
allele count: 1
allele frequency: 8.281436332317477e-6
allele num: 120752
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356416
  ensembl transcript: ENST00000367446
  gene symbol: TROVE2
  hgvsc: ENST00000367446.3:c.157T>C
  hgvsp: ENST00000367446.3:c.157T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl transcript: ENST00000460715
  gene symbol: TROVE2
  hgvsc: ENST00000460715.2:n.155-7290T>C
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000411421
  ensembl transcript: ENST00000416058
  gene symbol: TROVE2
  hgvsc: ENST00000416058.2:c.-669T>C
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000383752
  ensembl transcript: ENST00000400968
  gene symbol: TROVE2
  hgvsc: ENST00000400968.2:c.157T>C
  hgvsp: ENST00000400968.2:c.157T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356415
  ensembl transcript: ENST00000367445
  gene symbol: TROVE2
  hgvsc: ENST00000367445.3:c.157T>C
  hgvsp: ENST00000367445.3:c.157T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356413
  ensembl transcript: ENST00000367443
  gene symbol: TROVE2
  hgvsc: ENST00000367443.1:c.157T>C
  hgvsp: ENST00000367443.1:c.157T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356411
  ensembl transcript: ENST00000367441
  gene symbol: TROVE2
  hgvsc: ENST00000367441.1:c.157T>C
  hgvsp: ENST00000367441.1:c.157T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000472298
  ensembl transcript: ENST00000432079
  gene symbol: TROVE2
  hgvsc: ENST00000432079.1:c.-245-6609T>C
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000401176
  ensembl transcript: ENST00000415442
  gene symbol: TROVE2
  hgvsc: ENST00000415442.2:c.127+30T>C
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356414
  ensembl transcript: ENST00000367444
  gene symbol: TROVE2
  hgvsc: ENST00000367444.3:c.157T>C
  hgvsp: ENST00000367444.3:c.157T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11313
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11155
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2398
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20604
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 814
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24054
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 415
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Leu53Leu
num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ

1-193038341-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 193038341
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 193038341
    reference: chr 1
allele count: 2
allele frequency: 1.656287266463495e-5
allele num: 120752
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356411
  ensembl transcript: ENST00000367441
  gene symbol: TROVE2
  hgvsc: ENST00000367441.1:c.157T>G
  hgvsp: ENSP00000356411.1:p.Leu53Val
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000411421
  ensembl transcript: ENST00000416058
  gene symbol: TROVE2
  hgvsc: ENST00000416058.2:c.-669T>G
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356415
  ensembl transcript: ENST00000367445
  gene symbol: TROVE2
  hgvsc: ENST00000367445.3:c.157T>G
  hgvsp: ENSP00000356415.3:p.Leu53Val
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000401176
  ensembl transcript: ENST00000415442
  gene symbol: TROVE2
  hgvsc: ENST00000415442.2:c.127+30T>G
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356413
  ensembl transcript: ENST00000367443
  gene symbol: TROVE2
  hgvsc: ENST00000367443.1:c.157T>G
  hgvsp: ENSP00000356413.1:p.Leu53Val
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000472298
  ensembl transcript: ENST00000432079
  gene symbol: TROVE2
  hgvsc: ENST00000432079.1:c.-245-6609T>G
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl transcript: ENST00000460715
  gene symbol: TROVE2
  hgvsc: ENST00000460715.2:n.155-7290T>G
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356416
  ensembl transcript: ENST00000367446
  gene symbol: TROVE2
  hgvsc: ENST00000367446.3:c.157T>G
  hgvsp: ENSP00000356416.3:p.Leu53Val
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000383752
  ensembl transcript: ENST00000400968
  gene symbol: TROVE2
  hgvsc: ENST00000400968.2:c.157T>G
  hgvsp: ENSP00000383752.2:p.Leu53Val
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356414
  ensembl transcript: ENST00000367444
  gene symbol: TROVE2
  hgvsc: ENST00000367444.3:c.157T>G
  hgvsp: ENSP00000356414.3:p.Leu53Val
  variant of: http://identifiers.org/hgnc/11313
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20604
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11155
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24054
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 814
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2398
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2204
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43907
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Leu53Val
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
reference allele: T
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff

1-193038357-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 193038357
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 193038357
    reference: chr 1
allele count: 4
allele frequency: 3.31273913835655e-5
allele num: 120746
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356416
  ensembl transcript: ENST00000367446
  gene symbol: TROVE2
  hgvsc: ENST00000367446.3:c.173C>T
  hgvsp: ENSP00000356416.3:p.Ala58Val
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356413
  ensembl transcript: ENST00000367443
  gene symbol: TROVE2
  hgvsc: ENST00000367443.1:c.173C>T
  hgvsp: ENSP00000356413.1:p.Ala58Val
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000383752
  ensembl transcript: ENST00000400968
  gene symbol: TROVE2
  hgvsc: ENST00000400968.2:c.173C>T
  hgvsp: ENSP00000383752.2:p.Ala58Val
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356411
  ensembl transcript: ENST00000367441
  gene symbol: TROVE2
  hgvsc: ENST00000367441.1:c.173C>T
  hgvsp: ENSP00000356411.1:p.Ala58Val
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000411421
  ensembl transcript: ENST00000416058
  gene symbol: TROVE2
  hgvsc: ENST00000416058.2:c.-653C>T
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000472298
  ensembl transcript: ENST00000432079
  gene symbol: TROVE2
  hgvsc: ENST00000432079.1:c.-245-6593C>T
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356415
  ensembl transcript: ENST00000367445
  gene symbol: TROVE2
  hgvsc: ENST00000367445.3:c.173C>T
  hgvsp: ENSP00000356415.3:p.Ala58Val
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000401176
  ensembl transcript: ENST00000415442
  gene symbol: TROVE2
  hgvsc: ENST00000415442.2:c.127+46C>T
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl transcript: ENST00000460715
  gene symbol: TROVE2
  hgvsc: ENST00000460715.2:n.155-7274C>T
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356414
  ensembl transcript: ENST00000367444
  gene symbol: TROVE2
  hgvsc: ENST00000367444.3:c.173C>T
  hgvsp: ENSP00000356414.3:p.Ala58Val
  variant of: http://identifiers.org/hgnc/11313
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11155
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24092
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20498
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 814
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2399
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Ala58Val
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Latino
population: African
population: European (Non-Finnish)
population: Other
population: East Asian
reference allele: C
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum

1-193038360-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 193038360
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 193038360
    reference: chr 1
allele count: 205
allele frequency: 1.697778808407732e-3
allele num: 120746
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000411421
  ensembl transcript: ENST00000416058
  gene symbol: TROVE2
  hgvsc: ENST00000416058.2:c.-650A>G
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356413
  ensembl transcript: ENST00000367443
  gene symbol: TROVE2
  hgvsc: ENST00000367443.1:c.176A>G
  hgvsp: ENSP00000356413.1:p.Glu59Gly
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356415
  ensembl transcript: ENST00000367445
  gene symbol: TROVE2
  hgvsc: ENST00000367445.3:c.176A>G
  hgvsp: ENSP00000356415.3:p.Glu59Gly
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356416
  ensembl transcript: ENST00000367446
  gene symbol: TROVE2
  hgvsc: ENST00000367446.3:c.176A>G
  hgvsp: ENSP00000356416.3:p.Glu59Gly
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356411
  ensembl transcript: ENST00000367441
  gene symbol: TROVE2
  hgvsc: ENST00000367441.1:c.176A>G
  hgvsp: ENSP00000356411.1:p.Glu59Gly
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000472298
  ensembl transcript: ENST00000432079
  gene symbol: TROVE2
  hgvsc: ENST00000432079.1:c.-245-6590A>G
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356414
  ensembl transcript: ENST00000367444
  gene symbol: TROVE2
  hgvsc: ENST00000367444.3:c.176A>G
  hgvsp: ENSP00000356414.3:p.Glu59Gly
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl transcript: ENST00000460715
  gene symbol: TROVE2
  hgvsc: ENST00000460715.2:n.155-7271A>G
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000383752
  ensembl transcript: ENST00000400968
  gene symbol: TROVE2
  hgvsc: ENST00000400968.2:c.176A>G
  hgvsp: ENSP00000383752.2:p.Glu59Gly
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000401176
  ensembl transcript: ENST00000415442
  gene symbol: TROVE2
  hgvsc: ENST00000415442.2:c.127+49A>G
  variant of: http://identifiers.org/hgnc/11313
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 4.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11120
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20442
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 9.75e1
  variant carriers: 30
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 5.75e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 7.25e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 24058
  bin: 2.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 8.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 2386
  bin: 3.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 810
  bin: 4.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 5.25e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 6.25e1
  variant carriers: 26
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 6.75e1
  variant carriers: 20
genotype quality: GenotypeQuality
  all individuals: 43773
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1978
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Glu59Gly
num of homozygotes: 0
population: East Asian
population: African
population: Other
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: South Asian
reference allele: A
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum

http://identifiers.org/exac.variant/1-193038363-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 193038363
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 193038363
    reference: chr 1
allele count: 1
allele frequency: 8.282122210995345e-6
allele num: 120742
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356415
  ensembl transcript: ENST00000367445
  gene symbol: TROVE2
  hgvsc: ENST00000367445.3:c.179C>A
  hgvsp: ENSP00000356415.3:p.Ala60Asp
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000411421
  ensembl transcript: ENST00000416058
  gene symbol: TROVE2
  hgvsc: ENST00000416058.2:c.-647C>A
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl transcript: ENST00000460715
  gene symbol: TROVE2
  hgvsc: ENST00000460715.2:n.155-7268C>A
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000383752
  ensembl transcript: ENST00000400968
  gene symbol: TROVE2
  hgvsc: ENST00000400968.2:c.179C>A
  hgvsp: ENSP00000383752.2:p.Ala60Asp
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356411
  ensembl transcript: ENST00000367441
  gene symbol: TROVE2
  hgvsc: ENST00000367441.1:c.179C>A
  hgvsp: ENSP00000356411.1:p.Ala60Asp
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356413
  ensembl transcript: ENST00000367443
  gene symbol: TROVE2
  hgvsc: ENST00000367443.1:c.179C>A
  hgvsp: ENSP00000356413.1:p.Ala60Asp
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000472298
  ensembl transcript: ENST00000432079
  gene symbol: TROVE2
  hgvsc: ENST00000432079.1:c.-245-6587C>A
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356416
  ensembl transcript: ENST00000367446
  gene symbol: TROVE2
  hgvsc: ENST00000367446.3:c.179C>A
  hgvsp: ENSP00000356416.3:p.Ala60Asp
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: start_lost
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000424612
  ensembl transcript: ENST00000512587
  gene symbol: TROVE2
  hgvsc: ENST00000512587.1:c.2C>A
  hgvsp: ENSP00000424612.1:p.Ala1?
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000401176
  ensembl transcript: ENST00000415442
  gene symbol: TROVE2
  hgvsc: ENST00000415442.2:c.127+52C>A
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356414
  ensembl transcript: ENST00000367444
  gene symbol: TROVE2
  hgvsc: ENST00000367444.3:c.179C>A
  hgvsp: ENSP00000356414.3:p.Ala60Asp
  variant of: http://identifiers.org/hgnc/11313
canonical: false
consequence: start lost
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11180
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2392
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24136
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 806
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20451
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala1?
num of homozygotes: 0
population: South Asian
population: East Asian
population: Latino
population: Other
population: African
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: VQSLOD

http://identifiers.org/exac.variant/1-193038389-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 193038389
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 193038389
    reference: chr 1
allele count: 1
allele frequency: 8.282670995742708e-6
allele num: 120734
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356413
  ensembl transcript: ENST00000367443
  gene symbol: TROVE2
  hgvsc: ENST00000367443.1:c.205A>C
  hgvsp: ENST00000367443.1:c.205A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356415
  ensembl transcript: ENST00000367445
  gene symbol: TROVE2
  hgvsc: ENST00000367445.3:c.205A>C
  hgvsp: ENST00000367445.3:c.205A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000424612
  ensembl transcript: ENST00000512587
  gene symbol: TROVE2
  hgvsc: ENST00000512587.1:c.28A>C
  hgvsp: ENST00000512587.1:c.28A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000411421
  ensembl transcript: ENST00000416058
  gene symbol: TROVE2
  hgvsc: ENST00000416058.2:c.-621A>C
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl transcript: ENST00000460715
  gene symbol: TROVE2
  hgvsc: ENST00000460715.2:n.155-7242A>C
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356414
  ensembl transcript: ENST00000367444
  gene symbol: TROVE2
  hgvsc: ENST00000367444.3:c.205A>C
  hgvsp: ENST00000367444.3:c.205A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000472298
  ensembl transcript: ENST00000432079
  gene symbol: TROVE2
  hgvsc: ENST00000432079.1:c.-245-6561A>C
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356411
  ensembl transcript: ENST00000367441
  gene symbol: TROVE2
  hgvsc: ENST00000367441.1:c.205A>C
  hgvsp: ENST00000367441.1:c.205A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000401176
  ensembl transcript: ENST00000415442
  gene symbol: TROVE2
  hgvsc: ENST00000415442.2:c.127+78A>C
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356416
  ensembl transcript: ENST00000367446
  gene symbol: TROVE2
  hgvsc: ENST00000367446.3:c.205A>C
  hgvsp: ENST00000367446.3:c.205A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000383752
  ensembl transcript: ENST00000400968
  gene symbol: TROVE2
  hgvsc: ENST00000400968.2:c.205A>C
  hgvsp: ENST00000400968.2:c.205A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11313
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24128
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 806
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2375
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11151
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20294
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg69Arg
num of homozygotes: 0
population: Other
population: Latino
population: South Asian
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: African
reference allele: A
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum

1-193038411-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 193038411
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 193038411
    reference: chr 1
allele count: 2
allele frequency: 1.656918463042434e-5
allele num: 120706
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000383752
  ensembl transcript: ENST00000400968
  gene symbol: TROVE2
  hgvsc: ENST00000400968.2:c.227A>G
  hgvsp: ENSP00000383752.2:p.Glu76Gly
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356413
  ensembl transcript: ENST00000367443
  gene symbol: TROVE2
  hgvsc: ENST00000367443.1:c.227A>G
  hgvsp: ENSP00000356413.1:p.Glu76Gly
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000411421
  ensembl transcript: ENST00000416058
  gene symbol: TROVE2
  hgvsc: ENST00000416058.2:c.-599A>G
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356416
  ensembl transcript: ENST00000367446
  gene symbol: TROVE2
  hgvsc: ENST00000367446.3:c.227A>G
  hgvsp: ENSP00000356416.3:p.Glu76Gly
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000401176
  ensembl transcript: ENST00000415442
  gene symbol: TROVE2
  hgvsc: ENST00000415442.2:c.127+100A>G
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356414
  ensembl transcript: ENST00000367444
  gene symbol: TROVE2
  hgvsc: ENST00000367444.3:c.227A>G
  hgvsp: ENSP00000356414.3:p.Glu76Gly
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356415
  ensembl transcript: ENST00000367445
  gene symbol: TROVE2
  hgvsc: ENST00000367445.3:c.227A>G
  hgvsp: ENSP00000356415.3:p.Glu76Gly
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl transcript: ENST00000460715
  gene symbol: TROVE2
  hgvsc: ENST00000460715.2:n.155-7220A>G
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356411
  ensembl transcript: ENST00000367441
  gene symbol: TROVE2
  hgvsc: ENST00000367441.1:c.227A>G
  hgvsp: ENSP00000356411.1:p.Glu76Gly
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000424612
  ensembl transcript: ENST00000512587
  gene symbol: TROVE2
  hgvsc: ENST00000512587.1:c.50A>G
  hgvsp: ENSP00000424612.1:p.Glu17Gly
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000472298
  ensembl transcript: ENST00000432079
  gene symbol: TROVE2
  hgvsc: ENST00000432079.1:c.-245-6539A>G
  variant of: http://identifiers.org/hgnc/11313
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2340
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20309
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11056
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24118
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 788
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu76Gly
num of homozygotes: 0
population: Latino
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: East Asian
population: Other
reference allele: A
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP

1-193038421-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 193038421
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 193038421
    reference: chr 1
allele count: 41
allele frequency: 3.396570292436418e-4
allele num: 120710
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000424612
  ensembl transcript: ENST00000512587
  gene symbol: TROVE2
  hgvsc: ENST00000512587.1:c.60A>G
  hgvsp: ENST00000512587.1:c.60A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356411
  ensembl transcript: ENST00000367441
  gene symbol: TROVE2
  hgvsc: ENST00000367441.1:c.237A>G
  hgvsp: ENST00000367441.1:c.237A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356415
  ensembl transcript: ENST00000367445
  gene symbol: TROVE2
  hgvsc: ENST00000367445.3:c.237A>G
  hgvsp: ENST00000367445.3:c.237A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356414
  ensembl transcript: ENST00000367444
  gene symbol: TROVE2
  hgvsc: ENST00000367444.3:c.237A>G
  hgvsp: ENST00000367444.3:c.237A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000383752
  ensembl transcript: ENST00000400968
  gene symbol: TROVE2
  hgvsc: ENST00000400968.2:c.237A>G
  hgvsp: ENST00000400968.2:c.237A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl transcript: ENST00000460715
  gene symbol: TROVE2
  hgvsc: ENST00000460715.2:n.155-7210A>G
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356413
  ensembl transcript: ENST00000367443
  gene symbol: TROVE2
  hgvsc: ENST00000367443.1:c.237A>G
  hgvsp: ENST00000367443.1:c.237A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356416
  ensembl transcript: ENST00000367446
  gene symbol: TROVE2
  hgvsc: ENST00000367446.3:c.237A>G
  hgvsp: ENST00000367446.3:c.237A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000401176
  ensembl transcript: ENST00000415442
  gene symbol: TROVE2
  hgvsc: ENST00000415442.2:c.127+110A>G
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000411421
  ensembl transcript: ENST00000416058
  gene symbol: TROVE2
  hgvsc: ENST00000416058.2:c.-589A>G
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000472298
  ensembl transcript: ENST00000432079
  gene symbol: TROVE2
  hgvsc: ENST00000432079.1:c.-245-6529A>G
  variant of: http://identifiers.org/hgnc/11313
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20301
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 5.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 11026
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24164
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2345
  bin: 3.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 793
  bin: 4.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser79Ser
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: African
population: Other
reference allele: A
site quality: DP
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/1-193038425-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 193038425
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 193038425
    reference: chr 1
allele count: 1
allele frequency: 8.284866862189524e-6
allele num: 120702
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356411
  ensembl transcript: ENST00000367441
  gene symbol: TROVE2
  hgvsc: ENST00000367441.1:c.241A>C
  hgvsp: ENSP00000356411.1:p.Ser81Arg
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356413
  ensembl transcript: ENST00000367443
  gene symbol: TROVE2
  hgvsc: ENST00000367443.1:c.241A>C
  hgvsp: ENSP00000356413.1:p.Ser81Arg
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000424612
  ensembl transcript: ENST00000512587
  gene symbol: TROVE2
  hgvsc: ENST00000512587.1:c.64A>C
  hgvsp: ENSP00000424612.1:p.Ser22Arg
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000383752
  ensembl transcript: ENST00000400968
  gene symbol: TROVE2
  hgvsc: ENST00000400968.2:c.241A>C
  hgvsp: ENSP00000383752.2:p.Ser81Arg
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356415
  ensembl transcript: ENST00000367445
  gene symbol: TROVE2
  hgvsc: ENST00000367445.3:c.241A>C
  hgvsp: ENSP00000356415.3:p.Ser81Arg
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000411421
  ensembl transcript: ENST00000416058
  gene symbol: TROVE2
  hgvsc: ENST00000416058.2:c.-585A>C
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356414
  ensembl transcript: ENST00000367444
  gene symbol: TROVE2
  hgvsc: ENST00000367444.3:c.241A>C
  hgvsp: ENSP00000356414.3:p.Ser81Arg
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356416
  ensembl transcript: ENST00000367446
  gene symbol: TROVE2
  hgvsc: ENST00000367446.3:c.241A>C
  hgvsp: ENSP00000356416.3:p.Ser81Arg
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000472298
  ensembl transcript: ENST00000432079
  gene symbol: TROVE2
  hgvsc: ENST00000432079.1:c.-245-6525A>C
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000401176
  ensembl transcript: ENST00000415442
  gene symbol: TROVE2
  hgvsc: ENST00000415442.2:c.127+114A>C
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl transcript: ENST00000460715
  gene symbol: TROVE2
  hgvsc: ENST00000460715.2:n.155-7206A>C
  variant of: http://identifiers.org/hgnc/11313
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11016
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20322
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2342
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24194
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 787
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Ser81Arg
num of homozygotes: 0
population: Other
population: African
population: Latino
population: South Asian
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: A
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD

1-193038434-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 193038434
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 193038434
    reference: chr 1
allele count: 1
allele frequency: 8.284317786430287e-6
allele num: 120710
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000401176
  ensembl transcript: ENST00000415442
  gene symbol: TROVE2
  hgvsc: ENST00000415442.2:c.127+123G>A
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000411421
  ensembl transcript: ENST00000416058
  gene symbol: TROVE2
  hgvsc: ENST00000416058.2:c.-576G>A
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000424612
  ensembl transcript: ENST00000512587
  gene symbol: TROVE2
  hgvsc: ENST00000512587.1:c.73G>A
  hgvsp: ENSP00000424612.1:p.Gly25Ser
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356411
  ensembl transcript: ENST00000367441
  gene symbol: TROVE2
  hgvsc: ENST00000367441.1:c.250G>A
  hgvsp: ENSP00000356411.1:p.Gly84Ser
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl transcript: ENST00000460715
  gene symbol: TROVE2
  hgvsc: ENST00000460715.2:n.155-7197G>A
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356416
  ensembl transcript: ENST00000367446
  gene symbol: TROVE2
  hgvsc: ENST00000367446.3:c.250G>A
  hgvsp: ENSP00000356416.3:p.Gly84Ser
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000383752
  ensembl transcript: ENST00000400968
  gene symbol: TROVE2
  hgvsc: ENST00000400968.2:c.250G>A
  hgvsp: ENSP00000383752.2:p.Gly84Ser
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356413
  ensembl transcript: ENST00000367443
  gene symbol: TROVE2
  hgvsc: ENST00000367443.1:c.250G>A
  hgvsp: ENSP00000356413.1:p.Gly84Ser
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356415
  ensembl transcript: ENST00000367445
  gene symbol: TROVE2
  hgvsc: ENST00000367445.3:c.250G>A
  hgvsp: ENSP00000356415.3:p.Gly84Ser
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000472298
  ensembl transcript: ENST00000432079
  gene symbol: TROVE2
  hgvsc: ENST00000432079.1:c.-245-6516G>A
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356414
  ensembl transcript: ENST00000367444
  gene symbol: TROVE2
  hgvsc: ENST00000367444.3:c.250G>A
  hgvsp: ENSP00000356414.3:p.Gly84Ser
  variant of: http://identifiers.org/hgnc/11313
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11023
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2335
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24238
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 782
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20342
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly84Ser
num of homozygotes: 0
population: African
population: South Asian
population: European (Finnish)
population: Other
population: Latino
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum

1-193038436-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 193038436
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 193038436
    reference: chr 1
allele count: 1
allele frequency: 8.284180528862085e-6
allele num: 120712
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356411
  ensembl transcript: ENST00000367441
  gene symbol: TROVE2
  hgvsc: ENST00000367441.1:c.252C>T
  hgvsp: ENST00000367441.1:c.252C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000401176
  ensembl transcript: ENST00000415442
  gene symbol: TROVE2
  hgvsc: ENST00000415442.2:c.127+125C>T
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000411421
  ensembl transcript: ENST00000416058
  gene symbol: TROVE2
  hgvsc: ENST00000416058.2:c.-574C>T
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000383752
  ensembl transcript: ENST00000400968
  gene symbol: TROVE2
  hgvsc: ENST00000400968.2:c.252C>T
  hgvsp: ENST00000400968.2:c.252C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356415
  ensembl transcript: ENST00000367445
  gene symbol: TROVE2
  hgvsc: ENST00000367445.3:c.252C>T
  hgvsp: ENST00000367445.3:c.252C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl transcript: ENST00000460715
  gene symbol: TROVE2
  hgvsc: ENST00000460715.2:n.155-7195C>T
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356416
  ensembl transcript: ENST00000367446
  gene symbol: TROVE2
  hgvsc: ENST00000367446.3:c.252C>T
  hgvsp: ENST00000367446.3:c.252C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000472298
  ensembl transcript: ENST00000432079
  gene symbol: TROVE2
  hgvsc: ENST00000432079.1:c.-245-6514C>T
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000424612
  ensembl transcript: ENST00000512587
  gene symbol: TROVE2
  hgvsc: ENST00000512587.1:c.75C>T
  hgvsp: ENST00000512587.1:c.75C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356414
  ensembl transcript: ENST00000367444
  gene symbol: TROVE2
  hgvsc: ENST00000367444.3:c.252C>T
  hgvsp: ENST00000367444.3:c.252C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356413
  ensembl transcript: ENST00000367443
  gene symbol: TROVE2
  hgvsc: ENST00000367443.1:c.252C>T
  hgvsp: ENST00000367443.1:c.252C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11313
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20331
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2337
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 783
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11013
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24275
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly84Gly
num of homozygotes: 0
population: African
population: South Asian
population: European (Finnish)
population: East Asian
population: Other
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: QD
site quality: ClippingRankSum

http://identifiers.org/exac.variant/1-193038440-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 193038440
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 193038440
    reference: chr 1
allele count: 1
allele frequency: 8.284317786430287e-6
allele num: 120710
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356416
  ensembl transcript: ENST00000367446
  gene symbol: TROVE2
  hgvsc: ENST00000367446.3:c.256A>C
  hgvsp: ENSP00000356416.3:p.Thr86Pro
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356414
  ensembl transcript: ENST00000367444
  gene symbol: TROVE2
  hgvsc: ENST00000367444.3:c.256A>C
  hgvsp: ENSP00000356414.3:p.Thr86Pro
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000401176
  ensembl transcript: ENST00000415442
  gene symbol: TROVE2
  hgvsc: ENST00000415442.2:c.127+129A>C
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356415
  ensembl transcript: ENST00000367445
  gene symbol: TROVE2
  hgvsc: ENST00000367445.3:c.256A>C
  hgvsp: ENSP00000356415.3:p.Thr86Pro
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000383752
  ensembl transcript: ENST00000400968
  gene symbol: TROVE2
  hgvsc: ENST00000400968.2:c.256A>C
  hgvsp: ENSP00000383752.2:p.Thr86Pro
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000411421
  ensembl transcript: ENST00000416058
  gene symbol: TROVE2
  hgvsc: ENST00000416058.2:c.-570A>C
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356413
  ensembl transcript: ENST00000367443
  gene symbol: TROVE2
  hgvsc: ENST00000367443.1:c.256A>C
  hgvsp: ENSP00000356413.1:p.Thr86Pro
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356411
  ensembl transcript: ENST00000367441
  gene symbol: TROVE2
  hgvsc: ENST00000367441.1:c.256A>C
  hgvsp: ENSP00000356411.1:p.Thr86Pro
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl transcript: ENST00000460715
  gene symbol: TROVE2
  hgvsc: ENST00000460715.2:n.155-7191A>C
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000424612
  ensembl transcript: ENST00000512587
  gene symbol: TROVE2
  hgvsc: ENST00000512587.1:c.79A>C
  hgvsp: ENSP00000424612.1:p.Thr27Pro
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000472298
  ensembl transcript: ENST00000432079
  gene symbol: TROVE2
  hgvsc: ENST00000432079.1:c.-245-6510A>C
  variant of: http://identifiers.org/hgnc/11313
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 780
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24292
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10994
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20354
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2329
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr86Pro
num of homozygotes: 0
population: African
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: East Asian
population: South Asian
reference allele: A
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: DP

1-193038442-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 193038442
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 193038442
    reference: chr 1
allele count: 1
allele frequency: 8.284455048546906e-6
allele num: 120708
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356416
  ensembl transcript: ENST00000367446
  gene symbol: TROVE2
  hgvsc: ENST00000367446.3:c.258C>T
  hgvsp: ENST00000367446.3:c.258C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000383752
  ensembl transcript: ENST00000400968
  gene symbol: TROVE2
  hgvsc: ENST00000400968.2:c.258C>T
  hgvsp: ENST00000400968.2:c.258C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000424612
  ensembl transcript: ENST00000512587
  gene symbol: TROVE2
  hgvsc: ENST00000512587.1:c.81C>T
  hgvsp: ENST00000512587.1:c.81C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000401176
  ensembl transcript: ENST00000415442
  gene symbol: TROVE2
  hgvsc: ENST00000415442.2:c.127+131C>T
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000472298
  ensembl transcript: ENST00000432079
  gene symbol: TROVE2
  hgvsc: ENST00000432079.1:c.-245-6508C>T
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356411
  ensembl transcript: ENST00000367441
  gene symbol: TROVE2
  hgvsc: ENST00000367441.1:c.258C>T
  hgvsp: ENST00000367441.1:c.258C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356414
  ensembl transcript: ENST00000367444
  gene symbol: TROVE2
  hgvsc: ENST00000367444.3:c.258C>T
  hgvsp: ENST00000367444.3:c.258C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356415
  ensembl transcript: ENST00000367445
  gene symbol: TROVE2
  hgvsc: ENST00000367445.3:c.258C>T
  hgvsp: ENST00000367445.3:c.258C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356413
  ensembl transcript: ENST00000367443
  gene symbol: TROVE2
  hgvsc: ENST00000367443.1:c.258C>T
  hgvsp: ENST00000367443.1:c.258C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000411421
  ensembl transcript: ENST00000416058
  gene symbol: TROVE2
  hgvsc: ENST00000416058.2:c.-568C>T
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl transcript: ENST00000460715
  gene symbol: TROVE2
  hgvsc: ENST00000460715.2:n.155-7189C>T
  variant of: http://identifiers.org/hgnc/11313
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2329
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11015
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24297
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20346
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 783
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr86Thr
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: South Asian
reference allele: C
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff

1-193038443-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 193038443
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 193038443
    reference: chr 1
allele count: 1
allele frequency: 8.284455048546906e-6
allele num: 120708
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000411421
  ensembl transcript: ENST00000416058
  gene symbol: TROVE2
  hgvsc: ENST00000416058.2:c.-567A>T
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl transcript: ENST00000460715
  gene symbol: TROVE2
  hgvsc: ENST00000460715.2:n.155-7188A>T
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000401176
  ensembl transcript: ENST00000415442
  gene symbol: TROVE2
  hgvsc: ENST00000415442.2:c.127+132A>T
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356415
  ensembl transcript: ENST00000367445
  gene symbol: TROVE2
  hgvsc: ENST00000367445.3:c.259A>T
  hgvsp: ENSP00000356415.3:p.Thr87Ser
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356414
  ensembl transcript: ENST00000367444
  gene symbol: TROVE2
  hgvsc: ENST00000367444.3:c.259A>T
  hgvsp: ENSP00000356414.3:p.Thr87Ser
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356413
  ensembl transcript: ENST00000367443
  gene symbol: TROVE2
  hgvsc: ENST00000367443.1:c.259A>T
  hgvsp: ENSP00000356413.1:p.Thr87Ser
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000472298
  ensembl transcript: ENST00000432079
  gene symbol: TROVE2
  hgvsc: ENST00000432079.1:c.-245-6507A>T
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000383752
  ensembl transcript: ENST00000400968
  gene symbol: TROVE2
  hgvsc: ENST00000400968.2:c.259A>T
  hgvsp: ENSP00000383752.2:p.Thr87Ser
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356411
  ensembl transcript: ENST00000367441
  gene symbol: TROVE2
  hgvsc: ENST00000367441.1:c.259A>T
  hgvsp: ENSP00000356411.1:p.Thr87Ser
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356416
  ensembl transcript: ENST00000367446
  gene symbol: TROVE2
  hgvsc: ENST00000367446.3:c.259A>T
  hgvsp: ENSP00000356416.3:p.Thr87Ser
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000424612
  ensembl transcript: ENST00000512587
  gene symbol: TROVE2
  hgvsc: ENST00000512587.1:c.82A>T
  hgvsp: ENSP00000424612.1:p.Thr28Ser
  variant of: http://identifiers.org/hgnc/11313
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20336
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2327
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 781
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24314
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11006
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr87Ser
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Other
population: South Asian
population: African
population: Latino
reference allele: A
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff

1-193038445-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 193038445
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 193038445
    reference: chr 1
allele count: 18
allele frequency: 1.491078381020229e-4
allele num: 120718
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356411
  ensembl transcript: ENST00000367441
  gene symbol: TROVE2
  hgvsc: ENST00000367441.1:c.261A>G
  hgvsp: ENST00000367441.1:c.261A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356416
  ensembl transcript: ENST00000367446
  gene symbol: TROVE2
  hgvsc: ENST00000367446.3:c.261A>G
  hgvsp: ENST00000367446.3:c.261A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356415
  ensembl transcript: ENST00000367445
  gene symbol: TROVE2
  hgvsc: ENST00000367445.3:c.261A>G
  hgvsp: ENST00000367445.3:c.261A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000472298
  ensembl transcript: ENST00000432079
  gene symbol: TROVE2
  hgvsc: ENST00000432079.1:c.-245-6505A>G
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl transcript: ENST00000460715
  gene symbol: TROVE2
  hgvsc: ENST00000460715.2:n.155-7186A>G
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356414
  ensembl transcript: ENST00000367444
  gene symbol: TROVE2
  hgvsc: ENST00000367444.3:c.261A>G
  hgvsp: ENST00000367444.3:c.261A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000401176
  ensembl transcript: ENST00000415442
  gene symbol: TROVE2
  hgvsc: ENST00000415442.2:c.127+134A>G
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000383752
  ensembl transcript: ENST00000400968
  gene symbol: TROVE2
  hgvsc: ENST00000400968.2:c.261A>G
  hgvsp: ENST00000400968.2:c.261A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000424612
  ensembl transcript: ENST00000512587
  gene symbol: TROVE2
  hgvsc: ENST00000512587.1:c.84A>G
  hgvsp: ENST00000512587.1:c.84A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356413
  ensembl transcript: ENST00000367443
  gene symbol: TROVE2
  hgvsc: ENST00000367443.1:c.261A>G
  hgvsp: ENST00000367443.1:c.261A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000411421
  ensembl transcript: ENST00000416058
  gene symbol: TROVE2
  hgvsc: ENST00000416058.2:c.-565A>G
  variant of: http://identifiers.org/hgnc/11313
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 11003
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20337
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 775
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2326
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24331
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 359
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Thr87Thr
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: Other
population: East Asian
population: South Asian
reference allele: A
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS

1-193038456-CTA-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 193038456
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 193038454
    reference: chr 1
allele count: 1
allele frequency: 8.2847295864263e-6
allele num: 120704
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356413
  ensembl transcript: ENST00000367443
  gene symbol: TROVE2
  hgvsc: ENST00000367443.1:c.274_275delAT
  hgvsp: ENSP00000356413.1:p.Met92AlafsTer21
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356416
  ensembl transcript: ENST00000367446
  gene symbol: TROVE2
  hgvsc: ENST00000367446.3:c.274_275delAT
  hgvsp: ENSP00000356416.3:p.Met92AlafsTer21
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000401176
  ensembl transcript: ENST00000415442
  gene symbol: TROVE2
  hgvsc: ENST00000415442.2:c.127+147_127+148delAT
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl transcript: ENST00000460715
  gene symbol: TROVE2
  hgvsc: ENST00000460715.2:n.155-7173_155-7172delAT
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000424612
  ensembl transcript: ENST00000512587
  gene symbol: TROVE2
  hgvsc: ENST00000512587.1:c.97_98delAT
  hgvsp: ENSP00000424612.1:p.Met33AlafsTer21
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356411
  ensembl transcript: ENST00000367441
  gene symbol: TROVE2
  hgvsc: ENST00000367441.1:c.274_275delAT
  hgvsp: ENSP00000356411.1:p.Met92AlafsTer21
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000472298
  ensembl transcript: ENST00000432079
  gene symbol: TROVE2
  hgvsc: ENST00000432079.1:c.-245-6492_-245-6491delAT
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356415
  ensembl transcript: ENST00000367445
  gene symbol: TROVE2
  hgvsc: ENST00000367445.3:c.274_275delAT
  hgvsp: ENSP00000356415.3:p.Met92AlafsTer21
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000383752
  ensembl transcript: ENST00000400968
  gene symbol: TROVE2
  hgvsc: ENST00000400968.2:c.274_275delAT
  hgvsp: ENSP00000383752.2:p.Met92AlafsTer21
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000411421
  ensembl transcript: ENST00000416058
  gene symbol: TROVE2
  hgvsc: ENST00000416058.2:c.-552_-551delAT
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356414
  ensembl transcript: ENST00000367444
  gene symbol: TROVE2
  hgvsc: ENST00000367444.3:c.274_275delAT
  hgvsp: ENSP00000356414.3:p.Met92AlafsTer21
  variant of: http://identifiers.org/hgnc/11313
canonical: true
consequence: frameshift
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 20321
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24392
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 771
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2329
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11026
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Met92AlafsTer21
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: African
population: South Asian
population: East Asian
population: Other
reference allele: CTA
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff

1-193038458-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 193038458
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 193038458
    reference: chr 1
allele count: 3
allele frequency: 2.485254158658626e-5
allele num: 120712
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000472298
  ensembl transcript: ENST00000432079
  gene symbol: TROVE2
  hgvsc: ENST00000432079.1:c.-245-6492A>G
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000401176
  ensembl transcript: ENST00000415442
  gene symbol: TROVE2
  hgvsc: ENST00000415442.2:c.127+147A>G
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000383752
  ensembl transcript: ENST00000400968
  gene symbol: TROVE2
  hgvsc: ENST00000400968.2:c.274A>G
  hgvsp: ENSP00000383752.2:p.Met92Val
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356414
  ensembl transcript: ENST00000367444
  gene symbol: TROVE2
  hgvsc: ENST00000367444.3:c.274A>G
  hgvsp: ENSP00000356414.3:p.Met92Val
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl transcript: ENST00000460715
  gene symbol: TROVE2
  hgvsc: ENST00000460715.2:n.155-7173A>G
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356411
  ensembl transcript: ENST00000367441
  gene symbol: TROVE2
  hgvsc: ENST00000367441.1:c.274A>G
  hgvsp: ENSP00000356411.1:p.Met92Val
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356415
  ensembl transcript: ENST00000367445
  gene symbol: TROVE2
  hgvsc: ENST00000367445.3:c.274A>G
  hgvsp: ENSP00000356415.3:p.Met92Val
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000411421
  ensembl transcript: ENST00000416058
  gene symbol: TROVE2
  hgvsc: ENST00000416058.2:c.-552A>G
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356413
  ensembl transcript: ENST00000367443
  gene symbol: TROVE2
  hgvsc: ENST00000367443.1:c.274A>G
  hgvsp: ENSP00000356413.1:p.Met92Val
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356416
  ensembl transcript: ENST00000367446
  gene symbol: TROVE2
  hgvsc: ENST00000367446.3:c.274A>G
  hgvsp: ENSP00000356416.3:p.Met92Val
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000424612
  ensembl transcript: ENST00000512587
  gene symbol: TROVE2
  hgvsc: ENST00000512587.1:c.97A>G
  hgvsp: ENSP00000424612.1:p.Met33Val
  variant of: http://identifiers.org/hgnc/11313
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11014
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2325
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20322
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 769
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24411
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Met92Val
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: African
population: European (Finnish)
population: Latino
population: Other
reference allele: A
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: MQ

1-193038459-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 193038459
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 193038459
    reference: chr 1
allele count: 1
allele frequency: 8.284317786430287e-6
allele num: 120710
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000411421
  ensembl transcript: ENST00000416058
  gene symbol: TROVE2
  hgvsc: ENST00000416058.2:c.-551T>C
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000424612
  ensembl transcript: ENST00000512587
  gene symbol: TROVE2
  hgvsc: ENST00000512587.1:c.98T>C
  hgvsp: ENSP00000424612.1:p.Met33Thr
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356414
  ensembl transcript: ENST00000367444
  gene symbol: TROVE2
  hgvsc: ENST00000367444.3:c.275T>C
  hgvsp: ENSP00000356414.3:p.Met92Thr
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356416
  ensembl transcript: ENST00000367446
  gene symbol: TROVE2
  hgvsc: ENST00000367446.3:c.275T>C
  hgvsp: ENSP00000356416.3:p.Met92Thr
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000383752
  ensembl transcript: ENST00000400968
  gene symbol: TROVE2
  hgvsc: ENST00000400968.2:c.275T>C
  hgvsp: ENSP00000383752.2:p.Met92Thr
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356413
  ensembl transcript: ENST00000367443
  gene symbol: TROVE2
  hgvsc: ENST00000367443.1:c.275T>C
  hgvsp: ENSP00000356413.1:p.Met92Thr
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356411
  ensembl transcript: ENST00000367441
  gene symbol: TROVE2
  hgvsc: ENST00000367441.1:c.275T>C
  hgvsp: ENSP00000356411.1:p.Met92Thr
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl transcript: ENST00000460715
  gene symbol: TROVE2
  hgvsc: ENST00000460715.2:n.155-7172T>C
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356415
  ensembl transcript: ENST00000367445
  gene symbol: TROVE2
  hgvsc: ENST00000367445.3:c.275T>C
  hgvsp: ENSP00000356415.3:p.Met92Thr
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000401176
  ensembl transcript: ENST00000415442
  gene symbol: TROVE2
  hgvsc: ENST00000415442.2:c.127+148T>C
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000472298
  ensembl transcript: ENST00000432079
  gene symbol: TROVE2
  hgvsc: ENST00000432079.1:c.-245-6491T>C
  variant of: http://identifiers.org/hgnc/11313
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11016
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24429
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2320
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20313
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 770
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Met92Thr
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: East Asian
population: Latino
population: European (Finnish)
population: African
population: South Asian
reference allele: T
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum

1-193038478-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 193038478
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 193038478
    reference: chr 1
allele count: 1
allele frequency: 8.28349430923941e-6
allele num: 120722
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000401176
  ensembl transcript: ENST00000415442
  gene symbol: TROVE2
  hgvsc: ENST00000415442.2:c.127+167T>C
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356416
  ensembl transcript: ENST00000367446
  gene symbol: TROVE2
  hgvsc: ENST00000367446.3:c.294T>C
  hgvsp: ENST00000367446.3:c.294T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356415
  ensembl transcript: ENST00000367445
  gene symbol: TROVE2
  hgvsc: ENST00000367445.3:c.294T>C
  hgvsp: ENST00000367445.3:c.294T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000424612
  ensembl transcript: ENST00000512587
  gene symbol: TROVE2
  hgvsc: ENST00000512587.1:c.117T>C
  hgvsp: ENST00000512587.1:c.117T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000383752
  ensembl transcript: ENST00000400968
  gene symbol: TROVE2
  hgvsc: ENST00000400968.2:c.294T>C
  hgvsp: ENST00000400968.2:c.294T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000411421
  ensembl transcript: ENST00000416058
  gene symbol: TROVE2
  hgvsc: ENST00000416058.2:c.-532T>C
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356411
  ensembl transcript: ENST00000367441
  gene symbol: TROVE2
  hgvsc: ENST00000367441.1:c.294T>C
  hgvsp: ENST00000367441.1:c.294T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl transcript: ENST00000460715
  gene symbol: TROVE2
  hgvsc: ENST00000460715.2:n.155-7153T>C
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356414
  ensembl transcript: ENST00000367444
  gene symbol: TROVE2
  hgvsc: ENST00000367444.3:c.294T>C
  hgvsp: ENST00000367444.3:c.294T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356413
  ensembl transcript: ENST00000367443
  gene symbol: TROVE2
  hgvsc: ENST00000367443.1:c.294T>C
  hgvsp: ENST00000367443.1:c.294T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000472298
  ensembl transcript: ENST00000432079
  gene symbol: TROVE2
  hgvsc: ENST00000432079.1:c.-245-6472T>C
  variant of: http://identifiers.org/hgnc/11313
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2311
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24510
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11003
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20262
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 771
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ile98Ile
num of homozygotes: 0
population: South Asian
population: Latino
population: Other
population: East Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
reference allele: T
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum

1-193038488-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 193038488
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 193038488
    reference: chr 1
allele count: 1
allele frequency: 8.283082632032337e-6
allele num: 120728
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356411
  ensembl transcript: ENST00000367441
  gene symbol: TROVE2
  hgvsc: ENST00000367441.1:c.304T>G
  hgvsp: ENSP00000356411.1:p.Cys102Gly
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356414
  ensembl transcript: ENST00000367444
  gene symbol: TROVE2
  hgvsc: ENST00000367444.3:c.304T>G
  hgvsp: ENSP00000356414.3:p.Cys102Gly
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356413
  ensembl transcript: ENST00000367443
  gene symbol: TROVE2
  hgvsc: ENST00000367443.1:c.304T>G
  hgvsp: ENSP00000356413.1:p.Cys102Gly
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356416
  ensembl transcript: ENST00000367446
  gene symbol: TROVE2
  hgvsc: ENST00000367446.3:c.304T>G
  hgvsp: ENSP00000356416.3:p.Cys102Gly
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000472298
  ensembl transcript: ENST00000432079
  gene symbol: TROVE2
  hgvsc: ENST00000432079.1:c.-245-6462T>G
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356415
  ensembl transcript: ENST00000367445
  gene symbol: TROVE2
  hgvsc: ENST00000367445.3:c.304T>G
  hgvsp: ENSP00000356415.3:p.Cys102Gly
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000424612
  ensembl transcript: ENST00000512587
  gene symbol: TROVE2
  hgvsc: ENST00000512587.1:c.127T>G
  hgvsp: ENSP00000424612.1:p.Cys43Gly
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000411421
  ensembl transcript: ENST00000416058
  gene symbol: TROVE2
  hgvsc: ENST00000416058.2:c.-522T>G
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl transcript: ENST00000460715
  gene symbol: TROVE2
  hgvsc: ENST00000460715.2:n.155-7143T>G
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000401176
  ensembl transcript: ENST00000415442
  gene symbol: TROVE2
  hgvsc: ENST00000415442.2:c.127+177T>G
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000383752
  ensembl transcript: ENST00000400968
  gene symbol: TROVE2
  hgvsc: ENST00000400968.2:c.304T>G
  hgvsp: ENSP00000383752.2:p.Cys102Gly
  variant of: http://identifiers.org/hgnc/11313
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2304
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11011
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24542
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 770
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20202
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Cys102Gly
num of homozygotes: 0
population: East Asian
population: Other
population: South Asian
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
reference allele: T
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP

1-193038493-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 193038493
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 193038493
    reference: chr 1
allele count: 6
allele frequency: 4.970343616422015e-5
allele num: 120716
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000424612
  ensembl transcript: ENST00000512587
  gene symbol: TROVE2
  hgvsc: ENST00000512587.1:c.132C>T
  hgvsp: ENST00000512587.1:c.132C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356415
  ensembl transcript: ENST00000367445
  gene symbol: TROVE2
  hgvsc: ENST00000367445.3:c.309C>T
  hgvsp: ENST00000367445.3:c.309C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356411
  ensembl transcript: ENST00000367441
  gene symbol: TROVE2
  hgvsc: ENST00000367441.1:c.309C>T
  hgvsp: ENST00000367441.1:c.309C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000411421
  ensembl transcript: ENST00000416058
  gene symbol: TROVE2
  hgvsc: ENST00000416058.2:c.-517C>T
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000472298
  ensembl transcript: ENST00000432079
  gene symbol: TROVE2
  hgvsc: ENST00000432079.1:c.-245-6457C>T
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356414
  ensembl transcript: ENST00000367444
  gene symbol: TROVE2
  hgvsc: ENST00000367444.3:c.309C>T
  hgvsp: ENST00000367444.3:c.309C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356413
  ensembl transcript: ENST00000367443
  gene symbol: TROVE2
  hgvsc: ENST00000367443.1:c.309C>T
  hgvsp: ENST00000367443.1:c.309C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000383752
  ensembl transcript: ENST00000400968
  gene symbol: TROVE2
  hgvsc: ENST00000400968.2:c.309C>T
  hgvsp: ENST00000400968.2:c.309C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356416
  ensembl transcript: ENST00000367446
  gene symbol: TROVE2
  hgvsc: ENST00000367446.3:c.309C>T
  hgvsp: ENST00000367446.3:c.309C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl transcript: ENST00000460715
  gene symbol: TROVE2
  hgvsc: ENST00000460715.2:n.155-7138C>T
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000401176
  ensembl transcript: ENST00000415442
  gene symbol: TROVE2
  hgvsc: ENST00000415442.2:c.127+182C>T
  variant of: http://identifiers.org/hgnc/11313
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11044
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24562
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 766
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2317
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20113
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser103Ser
num of homozygotes: 0
population: European (Finnish)
population: African
population: South Asian
population: Latino
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: FS

1-193038494-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 193038494
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 193038494
    reference: chr 1
allele count: 17
allele frequency: 1.408240693185772e-4
allele num: 120718
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356416
  ensembl transcript: ENST00000367446
  gene symbol: TROVE2
  hgvsc: ENST00000367446.3:c.310G>A
  hgvsp: ENSP00000356416.3:p.Asp104Asn
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000424612
  ensembl transcript: ENST00000512587
  gene symbol: TROVE2
  hgvsc: ENST00000512587.1:c.133G>A
  hgvsp: ENSP00000424612.1:p.Asp45Asn
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000383752
  ensembl transcript: ENST00000400968
  gene symbol: TROVE2
  hgvsc: ENST00000400968.2:c.310G>A
  hgvsp: ENSP00000383752.2:p.Asp104Asn
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356411
  ensembl transcript: ENST00000367441
  gene symbol: TROVE2
  hgvsc: ENST00000367441.1:c.310G>A
  hgvsp: ENSP00000356411.1:p.Asp104Asn
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356415
  ensembl transcript: ENST00000367445
  gene symbol: TROVE2
  hgvsc: ENST00000367445.3:c.310G>A
  hgvsp: ENSP00000356415.3:p.Asp104Asn
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl transcript: ENST00000460715
  gene symbol: TROVE2
  hgvsc: ENST00000460715.2:n.155-7137G>A
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000472298
  ensembl transcript: ENST00000432079
  gene symbol: TROVE2
  hgvsc: ENST00000432079.1:c.-245-6456G>A
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356414
  ensembl transcript: ENST00000367444
  gene symbol: TROVE2
  hgvsc: ENST00000367444.3:c.310G>A
  hgvsp: ENSP00000356414.3:p.Asp104Asn
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000401176
  ensembl transcript: ENST00000415442
  gene symbol: TROVE2
  hgvsc: ENST00000415442.2:c.127+183G>A
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000411421
  ensembl transcript: ENST00000416058
  gene symbol: TROVE2
  hgvsc: ENST00000416058.2:c.-516G>A
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356413
  ensembl transcript: ENST00000367443
  gene symbol: TROVE2
  hgvsc: ENST00000367443.1:c.310G>A
  hgvsp: ENSP00000356413.1:p.Asp104Asn
  variant of: http://identifiers.org/hgnc/11313
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 24595
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11039
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2314
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20084
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 767
  bin: 4.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
hgvs: p.Asp104Asn
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: African
population: Latino
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum

1-193038499-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 193038499
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 193038499
    reference: chr 1
allele count: 14
allele frequency: 1.159650779450988e-4
allele num: 120726
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000424612
  ensembl transcript: ENST00000512587
  gene symbol: TROVE2
  hgvsc: ENST00000512587.1:c.138A>T
  hgvsp: ENST00000512587.1:c.138A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000383752
  ensembl transcript: ENST00000400968
  gene symbol: TROVE2
  hgvsc: ENST00000400968.2:c.315A>T
  hgvsp: ENST00000400968.2:c.315A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000401176
  ensembl transcript: ENST00000415442
  gene symbol: TROVE2
  hgvsc: ENST00000415442.2:c.127+188A>T
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356414
  ensembl transcript: ENST00000367444
  gene symbol: TROVE2
  hgvsc: ENST00000367444.3:c.315A>T
  hgvsp: ENST00000367444.3:c.315A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356411
  ensembl transcript: ENST00000367441
  gene symbol: TROVE2
  hgvsc: ENST00000367441.1:c.315A>T
  hgvsp: ENST00000367441.1:c.315A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000472298
  ensembl transcript: ENST00000432079
  gene symbol: TROVE2
  hgvsc: ENST00000432079.1:c.-245-6451A>T
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356416
  ensembl transcript: ENST00000367446
  gene symbol: TROVE2
  hgvsc: ENST00000367446.3:c.315A>T
  hgvsp: ENST00000367446.3:c.315A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356415
  ensembl transcript: ENST00000367445
  gene symbol: TROVE2
  hgvsc: ENST00000367445.3:c.315A>T
  hgvsp: ENST00000367445.3:c.315A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl transcript: ENST00000460715
  gene symbol: TROVE2
  hgvsc: ENST00000460715.2:n.155-7132A>T
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356413
  ensembl transcript: ENST00000367443
  gene symbol: TROVE2
  hgvsc: ENST00000367443.1:c.315A>T
  hgvsp: ENST00000367443.1:c.315A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000411421
  ensembl transcript: ENST00000416058
  gene symbol: TROVE2
  hgvsc: ENST00000416058.2:c.-511A>T
  variant of: http://identifiers.org/hgnc/11313
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2304
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 6.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 24629
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20078
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 11034
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 757
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ile105Ile
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Latino
population: African
population: South Asian
population: Other
reference allele: A
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum

1-193038510-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 193038510
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 193038510
    reference: chr 1
allele count: 3
allele frequency: 2.484965955966403e-5
allele num: 120726
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000383752
  ensembl transcript: ENST00000400968
  gene symbol: TROVE2
  hgvsc: ENST00000400968.2:c.326A>G
  hgvsp: ENSP00000383752.2:p.Gln109Arg
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356414
  ensembl transcript: ENST00000367444
  gene symbol: TROVE2
  hgvsc: ENST00000367444.3:c.326A>G
  hgvsp: ENSP00000356414.3:p.Gln109Arg
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356413
  ensembl transcript: ENST00000367443
  gene symbol: TROVE2
  hgvsc: ENST00000367443.1:c.326A>G
  hgvsp: ENSP00000356413.1:p.Gln109Arg
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000411421
  ensembl transcript: ENST00000416058
  gene symbol: TROVE2
  hgvsc: ENST00000416058.2:c.-500A>G
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl transcript: ENST00000460715
  gene symbol: TROVE2
  hgvsc: ENST00000460715.2:n.155-7121A>G
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000401176
  ensembl transcript: ENST00000415442
  gene symbol: TROVE2
  hgvsc: ENST00000415442.2:c.127+199A>G
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356415
  ensembl transcript: ENST00000367445
  gene symbol: TROVE2
  hgvsc: ENST00000367445.3:c.326A>G
  hgvsp: ENSP00000356415.3:p.Gln109Arg
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356411
  ensembl transcript: ENST00000367441
  gene symbol: TROVE2
  hgvsc: ENST00000367441.1:c.326A>G
  hgvsp: ENSP00000356411.1:p.Gln109Arg
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000472298
  ensembl transcript: ENST00000432079
  gene symbol: TROVE2
  hgvsc: ENST00000432079.1:c.-245-6440A>G
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356416
  ensembl transcript: ENST00000367446
  gene symbol: TROVE2
  hgvsc: ENST00000367446.3:c.326A>G
  hgvsp: ENSP00000356416.3:p.Gln109Arg
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000424612
  ensembl transcript: ENST00000512587
  gene symbol: TROVE2
  hgvsc: ENST00000512587.1:c.149A>G
  hgvsp: ENSP00000424612.1:p.Gln50Arg
  variant of: http://identifiers.org/hgnc/11313
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 751
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2294
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20074
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24663
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11021
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gln109Arg
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: Other
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: A
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: VQSLOD

1-193038525-C-CT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 193038525
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 193038526
    reference: chr 1
allele count: 1
allele frequency: 8.28349430923941e-6
allele num: 120722
alternate allele: CT
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356415
  ensembl transcript: ENST00000367445
  gene symbol: TROVE2
  hgvsc: ENST00000367445.3:c.342dupT
  hgvsp: ENSP00000356415.3:p.Val115CysfsTer3
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000472298
  ensembl transcript: ENST00000432079
  gene symbol: TROVE2
  hgvsc: ENST00000432079.1:c.-245-6424dupT
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356414
  ensembl transcript: ENST00000367444
  gene symbol: TROVE2
  hgvsc: ENST00000367444.3:c.342dupT
  hgvsp: ENSP00000356414.3:p.Val115CysfsTer3
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000383752
  ensembl transcript: ENST00000400968
  gene symbol: TROVE2
  hgvsc: ENST00000400968.2:c.342dupT
  hgvsp: ENSP00000383752.2:p.Val115CysfsTer3
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000424612
  ensembl transcript: ENST00000512587
  gene symbol: TROVE2
  hgvsc: ENST00000512587.1:c.165dupT
  hgvsp: ENSP00000424612.1:p.Val56CysfsTer3
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000411421
  ensembl transcript: ENST00000416058
  gene symbol: TROVE2
  hgvsc: ENST00000416058.2:c.-484dupT
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356413
  ensembl transcript: ENST00000367443
  gene symbol: TROVE2
  hgvsc: ENST00000367443.1:c.342dupT
  hgvsp: ENSP00000356413.1:p.Val115CysfsTer3
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000401176
  ensembl transcript: ENST00000415442
  gene symbol: TROVE2
  hgvsc: ENST00000415442.2:c.127+215dupT
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356411
  ensembl transcript: ENST00000367441
  gene symbol: TROVE2
  hgvsc: ENST00000367441.1:c.342dupT
  hgvsp: ENSP00000356411.1:p.Val115CysfsTer3
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl transcript: ENST00000460715
  gene symbol: TROVE2
  hgvsc: ENST00000460715.2:n.155-7105dupT
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356416
  ensembl transcript: ENST00000367446
  gene symbol: TROVE2
  hgvsc: ENST00000367446.3:c.342dupT
  hgvsp: ENSP00000356416.3:p.Val115CysfsTer3
  variant of: http://identifiers.org/hgnc/11313
canonical: true
consequence: frameshift
filter: VQSRTrancheINDEL95.00to96.00
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2287
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 752
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20016
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24765
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11030
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Val115CysfsTer3
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Finnish)
population: East Asian
population: Other
population: African
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: QD

1-193038530-T-TAAAG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 193038530
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 193038534
    reference: chr 1
allele count: 1
allele frequency: 8.28349430923941e-6
allele num: 120722
alternate allele: TAAAG
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: stop_gained
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000383752
  ensembl transcript: ENST00000400968
  gene symbol: TROVE2
  hgvsc: ENST00000400968.2:c.346_347insAAAG
  hgvsp: ENSP00000383752.2:p.Ser116Ter
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: stop_gained
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356414
  ensembl transcript: ENST00000367444
  gene symbol: TROVE2
  hgvsc: ENST00000367444.3:c.346_347insAAAG
  hgvsp: ENSP00000356414.3:p.Ser116Ter
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: stop_gained
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356415
  ensembl transcript: ENST00000367445
  gene symbol: TROVE2
  hgvsc: ENST00000367445.3:c.346_347insAAAG
  hgvsp: ENSP00000356415.3:p.Ser116Ter
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  consequence: stop_gained
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356416
  ensembl transcript: ENST00000367446
  gene symbol: TROVE2
  hgvsc: ENST00000367446.3:c.346_347insAAAG
  hgvsp: ENSP00000356416.3:p.Ser116Ter
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl transcript: ENST00000460715
  gene symbol: TROVE2
  hgvsc: ENST00000460715.2:n.155-7101_155-7100insAAAG
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000472298
  ensembl transcript: ENST00000432079
  gene symbol: TROVE2
  hgvsc: ENST00000432079.1:c.-245-6420_-245-6419insAAAG
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: stop_gained
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356413
  ensembl transcript: ENST00000367443
  gene symbol: TROVE2
  hgvsc: ENST00000367443.1:c.346_347insAAAG
  hgvsp: ENSP00000356413.1:p.Ser116Ter
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000401176
  ensembl transcript: ENST00000415442
  gene symbol: TROVE2
  hgvsc: ENST00000415442.2:c.127+219_127+220insAAAG
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: stop_gained
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356411
  ensembl transcript: ENST00000367441
  gene symbol: TROVE2
  hgvsc: ENST00000367441.1:c.346_347insAAAG
  hgvsp: ENSP00000356411.1:p.Ser116Ter
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000411421
  ensembl transcript: ENST00000416058
  gene symbol: TROVE2
  hgvsc: ENST00000416058.2:c.-480_-479insAAAG
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: stop_gained
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000424612
  ensembl transcript: ENST00000512587
  gene symbol: TROVE2
  hgvsc: ENST00000512587.1:c.169_170insAAAG
  hgvsp: ENSP00000424612.1:p.Ser57Ter
  variant of: http://identifiers.org/hgnc/11313
canonical: true
consequence: stop gained
filter: VQSRTrancheINDEL96.00to97.00
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24802
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20026
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11020
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 750
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2284
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser116Ter
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: South Asian
population: Other
population: Latino
population: African
population: European (Non-Finnish)
reference allele: T
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS

http://identifiers.org/exac.variant/1-193038531-C-CA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 193038531
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 193038532
    reference: chr 1
allele count: 1
allele frequency: 8.283219853221344e-6
allele num: 120726
alternate allele: CA
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356415
  ensembl transcript: ENST00000367445
  gene symbol: TROVE2
  hgvsc: ENST00000367445.3:c.347_348insA
  hgvsp: ENSP00000356415.3:p.Glu117Ter
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl transcript: ENST00000460715
  gene symbol: TROVE2
  hgvsc: ENST00000460715.2:n.155-7100_155-7099insA
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356411
  ensembl transcript: ENST00000367441
  gene symbol: TROVE2
  hgvsc: ENST00000367441.1:c.347_348insA
  hgvsp: ENSP00000356411.1:p.Glu117Ter
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000401176
  ensembl transcript: ENST00000415442
  gene symbol: TROVE2
  hgvsc: ENST00000415442.2:c.127+220_127+221insA
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000411421
  ensembl transcript: ENST00000416058
  gene symbol: TROVE2
  hgvsc: ENST00000416058.2:c.-479_-478insA
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000383752
  ensembl transcript: ENST00000400968
  gene symbol: TROVE2
  hgvsc: ENST00000400968.2:c.347_348insA
  hgvsp: ENSP00000383752.2:p.Glu117Ter
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000424612
  ensembl transcript: ENST00000512587
  gene symbol: TROVE2
  hgvsc: ENST00000512587.1:c.170_171insA
  hgvsp: ENSP00000424612.1:p.Glu58Ter
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356416
  ensembl transcript: ENST00000367446
  gene symbol: TROVE2
  hgvsc: ENST00000367446.3:c.347_348insA
  hgvsp: ENSP00000356416.3:p.Glu117Ter
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356414
  ensembl transcript: ENST00000367444
  gene symbol: TROVE2
  hgvsc: ENST00000367444.3:c.347_348insA
  hgvsp: ENSP00000356414.3:p.Glu117Ter
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356413
  ensembl transcript: ENST00000367443
  gene symbol: TROVE2
  hgvsc: ENST00000367443.1:c.347_348insA
  hgvsp: ENSP00000356413.1:p.Glu117Ter
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000472298
  ensembl transcript: ENST00000432079
  gene symbol: TROVE2
  hgvsc: ENST00000432079.1:c.-245-6419_-245-6418insA
  variant of: http://identifiers.org/hgnc/11313
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 751
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20021
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24811
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11022
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2286
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu117Ter
num of homozygotes: 0
population: East Asian
population: African
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD

1-193038532-T-TTTAAAG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 193038532
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 193038538
    reference: chr 1
allele count: 1
allele frequency: 8.282808203293245e-6
allele num: 120732
alternate allele: TTTAAAG
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356411
  ensembl transcript: ENST00000367441
  gene symbol: TROVE2
  hgvsc: ENST00000367441.1:c.348_349insTTAAAG
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000411421
  ensembl transcript: ENST00000416058
  gene symbol: TROVE2
  hgvsc: ENST00000416058.2:c.-478_-477insTTAAAG
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000383752
  ensembl transcript: ENST00000400968
  gene symbol: TROVE2
  hgvsc: ENST00000400968.2:c.348_349insTTAAAG
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: true
  consequence: inframe_insertion
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356416
  ensembl transcript: ENST00000367446
  gene symbol: TROVE2
  hgvsc: ENST00000367446.3:c.348_349insTTAAAG
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356414
  ensembl transcript: ENST00000367444
  gene symbol: TROVE2
  hgvsc: ENST00000367444.3:c.348_349insTTAAAG
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000424612
  ensembl transcript: ENST00000512587
  gene symbol: TROVE2
  hgvsc: ENST00000512587.1:c.171_172insTTAAAG
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356415
  ensembl transcript: ENST00000367445
  gene symbol: TROVE2
  hgvsc: ENST00000367445.3:c.348_349insTTAAAG
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl transcript: ENST00000460715
  gene symbol: TROVE2
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000401176
  ensembl transcript: ENST00000415442
  gene symbol: TROVE2
  hgvsc: ENST00000415442.2:c.127+221_127+222insTTAAAG
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356413
  ensembl transcript: ENST00000367443
  gene symbol: TROVE2
  hgvsc: ENST00000367443.1:c.348_349insTTAAAG
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000472298
  ensembl transcript: ENST00000432079
  gene symbol: TROVE2
  variant of: http://identifiers.org/hgnc/11313
canonical: true
consequence: inframe insertion
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11020
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2280
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20028
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 751
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24821
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 328
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Ser116_Glu117insLeuLys
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: South Asian
population: Other
reference allele: T
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: VQSLOD

1-193038542-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 193038542
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 193038542
    reference: chr 1
allele count: 1
allele frequency: 8.283219853221344e-6
allele num: 120726
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000383752
  ensembl transcript: ENST00000400968
  gene symbol: TROVE2
  hgvsc: ENST00000400968.2:c.358C>T
  hgvsp: ENSP00000383752.2:p.Arg120Cys
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl transcript: ENST00000460715
  gene symbol: TROVE2
  hgvsc: ENST00000460715.2:n.155-7089C>T
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356416
  ensembl transcript: ENST00000367446
  gene symbol: TROVE2
  hgvsc: ENST00000367446.3:c.358C>T
  hgvsp: ENSP00000356416.3:p.Arg120Cys
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000472298
  ensembl transcript: ENST00000432079
  gene symbol: TROVE2
  hgvsc: ENST00000432079.1:c.-245-6408C>T
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356415
  ensembl transcript: ENST00000367445
  gene symbol: TROVE2
  hgvsc: ENST00000367445.3:c.358C>T
  hgvsp: ENSP00000356415.3:p.Arg120Cys
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000411421
  ensembl transcript: ENST00000416058
  gene symbol: TROVE2
  hgvsc: ENST00000416058.2:c.-468C>T
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000401176
  ensembl transcript: ENST00000415442
  gene symbol: TROVE2
  hgvsc: ENST00000415442.2:c.127+231C>T
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356411
  ensembl transcript: ENST00000367441
  gene symbol: TROVE2
  hgvsc: ENST00000367441.1:c.358C>T
  hgvsp: ENSP00000356411.1:p.Arg120Cys
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356414
  ensembl transcript: ENST00000367444
  gene symbol: TROVE2
  hgvsc: ENST00000367444.3:c.358C>T
  hgvsp: ENSP00000356414.3:p.Arg120Cys
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356413
  ensembl transcript: ENST00000367443
  gene symbol: TROVE2
  hgvsc: ENST00000367443.1:c.358C>T
  hgvsp: ENSP00000356413.1:p.Arg120Cys
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000424612
  ensembl transcript: ENST00000512587
  gene symbol: TROVE2
  hgvsc: ENST00000512587.1:c.181C>T
  hgvsp: ENSP00000424612.1:p.Arg61Cys
  variant of: http://identifiers.org/hgnc/11313
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24875
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11040
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 753
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20007
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2281
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg120Cys
num of homozygotes: 0
population: African
population: Other
population: East Asian
population: Latino
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: MQ

1-193038543-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 193038543
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 193038543
    reference: chr 1
allele count: 4
allele frequency: 3.312958637711408e-5
allele num: 120738
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356416
  ensembl transcript: ENST00000367446
  gene symbol: TROVE2
  hgvsc: ENST00000367446.3:c.359G>A
  hgvsp: ENSP00000356416.3:p.Arg120His
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356413
  ensembl transcript: ENST00000367443
  gene symbol: TROVE2
  hgvsc: ENST00000367443.1:c.359G>A
  hgvsp: ENSP00000356413.1:p.Arg120His
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000401176
  ensembl transcript: ENST00000415442
  gene symbol: TROVE2
  hgvsc: ENST00000415442.2:c.127+232G>A
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000472298
  ensembl transcript: ENST00000432079
  gene symbol: TROVE2
  hgvsc: ENST00000432079.1:c.-245-6407G>A
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl transcript: ENST00000460715
  gene symbol: TROVE2
  hgvsc: ENST00000460715.2:n.155-7088G>A
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000424612
  ensembl transcript: ENST00000512587
  gene symbol: TROVE2
  hgvsc: ENST00000512587.1:c.182G>A
  hgvsp: ENSP00000424612.1:p.Arg61His
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000383752
  ensembl transcript: ENST00000400968
  gene symbol: TROVE2
  hgvsc: ENST00000400968.2:c.359G>A
  hgvsp: ENSP00000383752.2:p.Arg120His
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356415
  ensembl transcript: ENST00000367445
  gene symbol: TROVE2
  hgvsc: ENST00000367445.3:c.359G>A
  hgvsp: ENSP00000356415.3:p.Arg120His
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000411421
  ensembl transcript: ENST00000416058
  gene symbol: TROVE2
  hgvsc: ENST00000416058.2:c.-467G>A
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356411
  ensembl transcript: ENST00000367441
  gene symbol: TROVE2
  hgvsc: ENST00000367441.1:c.359G>A
  hgvsp: ENSP00000356411.1:p.Arg120His
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356414
  ensembl transcript: ENST00000367444
  gene symbol: TROVE2
  hgvsc: ENST00000367444.3:c.359G>A
  hgvsp: ENSP00000356414.3:p.Arg120His
  variant of: http://identifiers.org/hgnc/11313
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2276
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 755
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20006
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11056
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24871
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg120His
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: Other
population: European (Non-Finnish)
population: South Asian
population: African
reference allele: G
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP

1-193038549-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 193038549
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 193038549
    reference: chr 1
allele count: 1
allele frequency: 8.281985026171072e-6
allele num: 120744
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000424612
  ensembl transcript: ENST00000512587
  gene symbol: TROVE2
  hgvsc: ENST00000512587.1:c.188C>T
  hgvsp: ENSP00000424612.1:p.Pro63Leu
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356413
  ensembl transcript: ENST00000367443
  gene symbol: TROVE2
  hgvsc: ENST00000367443.1:c.365C>T
  hgvsp: ENSP00000356413.1:p.Pro122Leu
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356411
  ensembl transcript: ENST00000367441
  gene symbol: TROVE2
  hgvsc: ENST00000367441.1:c.365C>T
  hgvsp: ENSP00000356411.1:p.Pro122Leu
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356416
  ensembl transcript: ENST00000367446
  gene symbol: TROVE2
  hgvsc: ENST00000367446.3:c.365C>T
  hgvsp: ENSP00000356416.3:p.Pro122Leu
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000383752
  ensembl transcript: ENST00000400968
  gene symbol: TROVE2
  hgvsc: ENST00000400968.2:c.365C>T
  hgvsp: ENSP00000383752.2:p.Pro122Leu
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000401176
  ensembl transcript: ENST00000415442
  gene symbol: TROVE2
  hgvsc: ENST00000415442.2:c.127+238C>T
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356414
  ensembl transcript: ENST00000367444
  gene symbol: TROVE2
  hgvsc: ENST00000367444.3:c.365C>T
  hgvsp: ENSP00000356414.3:p.Pro122Leu
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000472298
  ensembl transcript: ENST00000432079
  gene symbol: TROVE2
  hgvsc: ENST00000432079.1:c.-245-6401C>T
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000411421
  ensembl transcript: ENST00000416058
  gene symbol: TROVE2
  hgvsc: ENST00000416058.2:c.-461C>T
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356415
  ensembl transcript: ENST00000367445
  gene symbol: TROVE2
  hgvsc: ENST00000367445.3:c.365C>T
  hgvsp: ENSP00000356415.3:p.Pro122Leu
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl transcript: ENST00000460715
  gene symbol: TROVE2
  hgvsc: ENST00000460715.2:n.155-7082C>T
  variant of: http://identifiers.org/hgnc/11313
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 24924
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 748
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11052
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20009
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2280
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro122Leu
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: African
population: Other
population: Latino
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: DP

1-193038613-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 193038613
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 193038613
    reference: chr 1
allele count: 4
allele frequency: 3.31208081477188e-5
allele num: 120770
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356414
  ensembl transcript: ENST00000367444
  gene symbol: TROVE2
  hgvsc: ENST00000367444.3:c.429G>A
  hgvsp: ENSP00000356414.3:p.Met143Ile
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000383752
  ensembl transcript: ENST00000400968
  gene symbol: TROVE2
  hgvsc: ENST00000400968.2:c.429G>A
  hgvsp: ENSP00000383752.2:p.Met143Ile
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356413
  ensembl transcript: ENST00000367443
  gene symbol: TROVE2
  hgvsc: ENST00000367443.1:c.429G>A
  hgvsp: ENSP00000356413.1:p.Met143Ile
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000472298
  ensembl transcript: ENST00000432079
  gene symbol: TROVE2
  hgvsc: ENST00000432079.1:c.-245-6337G>A
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000411421
  ensembl transcript: ENST00000416058
  gene symbol: TROVE2
  hgvsc: ENST00000416058.2:c.-397G>A
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl transcript: ENST00000460715
  gene symbol: TROVE2
  hgvsc: ENST00000460715.2:n.155-7018G>A
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000424612
  ensembl transcript: ENST00000512587
  gene symbol: TROVE2
  hgvsc: ENST00000512587.1:c.252G>A
  hgvsp: ENSP00000424612.1:p.Met84Ile
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356411
  ensembl transcript: ENST00000367441
  gene symbol: TROVE2
  hgvsc: ENST00000367441.1:c.429G>A
  hgvsp: ENSP00000356411.1:p.Met143Ile
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356415
  ensembl transcript: ENST00000367445
  gene symbol: TROVE2
  hgvsc: ENST00000367445.3:c.429G>A
  hgvsp: ENSP00000356415.3:p.Met143Ile
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000356416
  ensembl transcript: ENST00000367446
  gene symbol: TROVE2
  hgvsc: ENST00000367446.3:c.429G>A
  hgvsp: ENSP00000356416.3:p.Met143Ile
  variant of: http://identifiers.org/hgnc/11313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000116747
  ensembl protein: ENSP00000401176
  ensembl transcript: ENST00000415442
  gene symbol: TROVE2
  hgvsc: ENST00000415442.2:c.127+302G>A
  variant of: http://identifiers.org/hgnc/11313
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 20020
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2263
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25077
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 746
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11063
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Met143Ile
num of homozygotes: 0
reference allele: G

GenotypeQuality
all individuals: 953
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1821
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2212
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 866
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 180
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3406
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 759
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5851
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2121
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2644
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 77
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4944
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1440
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2474
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 597
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 919
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28211
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 742
bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13856
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7742
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 828
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6506
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11158
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9250
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.233107015842224e-5
allele num: 61860
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 8.83e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.18e-1

FS
type: SiteQuality
SIO_000300: 2.288e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.6e-3

VQSLOD
type: SiteQuality
SIO_000300: 6.51e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.151e0

QD
type: SiteQuality
SIO_000300: 1.142e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.19e-1

DP
type: SiteQuality
SIO_000300: 1.377605e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeDepth
all individuals: 41
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4742
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 744
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1986
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 410
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 189
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2834
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 608
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 147
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 617
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6009
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 658
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1845
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31403
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2252
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1467
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1853
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2475
bin: 9.75e1
variant carriers: 3

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9292
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14022
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7802
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11190
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.826099546346643e-5
allele num: 62162
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6518
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 832
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.54e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.5e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 9.57e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.2e-1

QD
type: SiteQuality
SIO_000300: 1.768e1

DP
type: SiteQuality
SIO_000300: 1.402264e6

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 4.4e0

MQ
type: SiteQuality
SIO_000300: 5.969e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.93e0

GenotypeDepth
all individuals: 12803
bin: 2.75e1
variant carriers: 37

GenotypeQuality
all individuals: 2230
bin: 3.25e1
variant carriers: 3

GenotypeQuality
all individuals: 2854
bin: 2.25e1
variant carriers: 14

GenotypeQuality
all individuals: 578
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7238
bin: 2.5e0
variant carriers: 16

GenotypeQuality
all individuals: 2112
bin: 3.75e1
variant carriers: 2

GenotypeQuality
all individuals: 2100
bin: 4.25e1
variant carriers: 4

GenotypeQuality
all individuals: 1616
bin: 7.5e0
variant carriers: 15

GenotypeQuality
all individuals: 1702
bin: 1.75e1
variant carriers: 24

GenotypeQuality
all individuals: 1867
bin: 4.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3815
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22740
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2273
bin: 2.75e1
variant carriers: 13

GenotypeQuality
all individuals: 1746
bin: 1.25e1
variant carriers: 21

GenotypeQuality
all individuals: 1805
bin: 5.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1759
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 289
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 333
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1050
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1256
bin: 9.75e1
variant carriers: 6

GenotypeQuality
all individuals: 1040
bin: 7.25e1
variant carriers: 0

South Asian
type: Population
allele count: 13
allele frequency: 1.176257690915671e-3
allele num: 11052
num of homozygotes: 0

African
type: Population
allele count: 6
allele frequency: 7.481296758104738e-4
allele num: 8020
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5866
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 2.167316861725184e-4
allele num: 9228
num of homozygotes: 0

East Asian
type: Population
allele count: 4
allele frequency: 6.082725060827251e-4
allele num: 6576
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 734
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 21
allele frequency: 3.963161470521627e-4
allele num: 52988
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.2e-1

DP
type: SiteQuality
SIO_000300: 1.990308e6

MQRankSum
type: SiteQuality
SIO_000300: 1.93e-1

MQ
type: SiteQuality
SIO_000300: 5.987e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.4e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-2

FS
type: SiteQuality
SIO_000300: 1.406e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.22e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.9e-2

QD
type: SiteQuality
SIO_000300: 4.3e-1

GenotypeDepth
all individuals: 430
bin: 9.75e1
variant carriers: 121

GenotypeQuality
all individuals: 2273
bin: 2.75e1
variant carriers: 116

GenotypeQuality
all individuals: 2112
bin: 3.75e1
variant carriers: 71

GenotypeQuality
all individuals: 2854
bin: 2.25e1
variant carriers: 106

GenotypeQuality
all individuals: 1616
bin: 7.5e0
variant carriers: 149

GenotypeQuality
all individuals: 7238
bin: 2.5e0
variant carriers: 141

GenotypeQuality
all individuals: 1867
bin: 4.75e1
variant carriers: 49

GenotypeQuality
all individuals: 3815
bin: 6.75e1
variant carriers: 26

GenotypeQuality
all individuals: 1050
bin: 7.75e1
variant carriers: 22

GenotypeQuality
all individuals: 1746
bin: 1.25e1
variant carriers: 183

GenotypeQuality
all individuals: 2230
bin: 3.25e1
variant carriers: 95

GenotypeQuality
all individuals: 1702
bin: 1.75e1
variant carriers: 157

GenotypeQuality
all individuals: 2100
bin: 4.25e1
variant carriers: 72

GenotypeQuality
all individuals: 1805
bin: 5.25e1
variant carriers: 42

GenotypeQuality
all individuals: 1759
bin: 5.75e1
variant carriers: 40

GenotypeQuality
all individuals: 289
bin: 8.75e1
variant carriers: 11

GenotypeQuality
all individuals: 333
bin: 9.25e1
variant carriers: 12

GenotypeQuality
all individuals: 1256
bin: 9.75e1
variant carriers: 107

GenotypeQuality
all individuals: 22740
bin: 6.25e1
variant carriers: 34

GenotypeQuality
all individuals: 578
bin: 8.25e1
variant carriers: 14

GenotypeQuality
all individuals: 1040
bin: 7.25e1
variant carriers: 22

European (Finnish)
type: Population
allele count: 2
allele frequency: 3.409478349812479e-4
allele num: 5866
num of homozygotes: 0

South Asian
type: Population
allele count: 140
allele frequency: 1.266739051755338e-2
allele num: 11052
num of homozygotes: 0

Latino
type: Population
allele count: 58
allele frequency: 6.285218899003034e-3
allele num: 9228
num of homozygotes: 0

East Asian
type: Population
allele count: 49
allele frequency: 7.451338199513382e-3
allele num: 6576
num of homozygotes: 0

Other
type: Population
allele count: 4
allele frequency: 5.449591280653951e-3
allele num: 734
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 535
allele frequency: 1.009662565109081e-2
allele num: 52988
num of homozygotes: 0

African
type: Population
allele count: 51
allele frequency: 6.359102244389027e-3
allele num: 8020
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.987e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.4e-2

FS
type: SiteQuality
SIO_000300: 1.406e0

MQRankSum
type: SiteQuality
SIO_000300: 1.93e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-2

DP
type: SiteQuality
SIO_000300: 1.990308e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.9e-2

VQSLOD
type: SiteQuality
SIO_000300: 2.2e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.22e-1

QD
type: SiteQuality
SIO_000300: 4.3e-1

GenotypeQuality
all individuals: 427
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 118
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 993
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variant carriers: 0

GenotypeQuality
all individuals: 216
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
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GenotypeQuality
all individuals: 42178
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 2091
bin: 7.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 3

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8986
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variant carriers: 0

GenotypeQuality
all individuals: 180
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2208
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 183
bin: 3.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66246
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9782
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11542
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16288
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

East Asian
type: Population
allele count: 3
allele frequency: 3.494060097833683e-4
allele num: 8586
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.782e0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.52e-1

DP
type: SiteQuality
SIO_000300: 1.642004e6

MQ
type: SiteQuality
SIO_000300: 5.963e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.4e-3

QD
type: SiteQuality
SIO_000300: 1.257e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.685e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.76e0

VQSLOD
type: SiteQuality
SIO_000300: 9.71e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.81e-1

GenotypeDepth
all individuals: 149
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 230
bin: 5.25e1
variant carriers: 2

GenotypeDepth
all individuals: 133
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 986
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 173
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
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variant carriers: 0

GenotypeQuality
all individuals: 15
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variant carriers: 0

GenotypeQuality
all individuals: 206
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2204
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variant carriers: 0

GenotypeQuality
all individuals: 426
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variant carriers: 0

GenotypeQuality
all individuals: 155
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
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variant carriers: 0

GenotypeQuality
all individuals: 497
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variant carriers: 0

GenotypeQuality
all individuals: 88
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variant carriers: 0

GenotypeQuality
all individuals: 127
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8971
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 181
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42352
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2081
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 390
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variant carriers: 0

GenotypeQuality
all individuals: 1337
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 174
bin: 5.25e1
variant carriers: 0

Latino
type: Population
allele count: 4
allele frequency: 3.465603881476347e-4
allele num: 11542
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16300
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8588
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66274
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9788
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 8.38e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.37e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.8e-3

MQ
type: SiteQuality
SIO_000300: 6.003e1

DP
type: SiteQuality
SIO_000300: 1.643562e6

VQSLOD
type: SiteQuality
SIO_000300: 2.95e0

MQRankSum
type: SiteQuality
SIO_000300: 6.12e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.33e-1

QD
type: SiteQuality
SIO_000300: 1.304e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.13e-1

GenotypeDepth
all individuals: 2424
bin: 3.75e1
variant carriers: 1

GenotypeQuality
all individuals: 42270
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1333
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 2198
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 389
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variant carriers: 0

GenotypeQuality
all individuals: 209
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 425
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variant carriers: 0

GenotypeQuality
all individuals: 8955
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variant carriers: 0

GenotypeQuality
all individuals: 158
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 218
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
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variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
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variant carriers: 0

GenotypeQuality
all individuals: 475
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variant carriers: 0

GenotypeQuality
all individuals: 972
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 182
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2053
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 131
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 175
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 197
bin: 5.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16310
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11536
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9786
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

East Asian
type: Population
allele count: 3
allele frequency: 3.493246390312063e-4
allele num: 8588
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66296
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.6e-3

VQSLOD
type: SiteQuality
SIO_000300: 1.14e0

FS
type: SiteQuality
SIO_000300: 4.696e0

DP
type: SiteQuality
SIO_000300: 1.644674e6

MQRankSum
type: SiteQuality
SIO_000300: -2.103e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.0e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.08e-1

MQ
type: SiteQuality
SIO_000300: 5.375e1

QD
type: SiteQuality
SIO_000300: 1.784e1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.92e-1

GenotypeDepth
all individuals: 824
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 152
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 117
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variant carriers: 0

GenotypeQuality
all individuals: 3
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variant carriers: 0

GenotypeQuality
all individuals: 107
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GenotypeQuality
all individuals: 9
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GenotypeQuality
all individuals: 119
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GenotypeQuality
all individuals: 101
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GenotypeQuality
all individuals: 27
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GenotypeQuality
all individuals: 1349
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variant carriers: 1

GenotypeQuality
all individuals: 327
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GenotypeQuality
all individuals: 9
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GenotypeQuality
all individuals: 2200
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GenotypeQuality
all individuals: 8985
bin: 6.75e1
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GenotypeQuality
all individuals: 958
bin: 8.25e1
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GenotypeQuality
all individuals: 42894
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 386
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variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 5.75e1
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GenotypeQuality
all individuals: 2041
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 422
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 121
bin: 4.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9792
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66424
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16388
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.163061177017911e-4
allele num: 8598
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.2e-3

VQSLOD
type: SiteQuality
SIO_000300: 1.85e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.03e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.799999999999999e-2

DP
type: SiteQuality
SIO_000300: 1.648756e6

MQRankSum
type: SiteQuality
SIO_000300: 4.24e-1

FS
type: SiteQuality
SIO_000300: 8.35e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.841e0

QD
type: SiteQuality
SIO_000300: 1.353e1

GenotypeDepth
all individuals: 77
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 79
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 327
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 107
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variant carriers: 0

GenotypeQuality
all individuals: 3
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variant carriers: 0

GenotypeQuality
all individuals: 117
bin: 3.25e1
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GenotypeQuality
all individuals: 9
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variant carriers: 0

GenotypeQuality
all individuals: 2041
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 121
bin: 4.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 2200
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
all individuals: 101
bin: 4.25e1
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 7.5e0
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GenotypeQuality
all individuals: 42894
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 422
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GenotypeQuality
all individuals: 1349
bin: 9.75e1
variant carriers: 19

GenotypeQuality
all individuals: 386
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 958
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 19
allele frequency: 1.940359477124183e-3
allele num: 9792
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66424
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8598
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16388
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.841e0

VQSLOD
type: SiteQuality
SIO_000300: 1.85e0

FS
type: SiteQuality
SIO_000300: 8.35e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.03e-1

QD
type: SiteQuality
SIO_000300: 1.353e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.2e-3

MQRankSum
type: SiteQuality
SIO_000300: 4.24e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.799999999999999e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.648756e6

GenotypeDepth
all individuals: 80
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variant carriers: 0

GenotypeQuality
all individuals: 82
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variant carriers: 0

GenotypeQuality
all individuals: 140
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GenotypeQuality
all individuals: 89
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GenotypeQuality
all individuals: 4
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GenotypeQuality
all individuals: 384
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GenotypeQuality
all individuals: 1328
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GenotypeQuality
all individuals: 43003
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GenotypeQuality
all individuals: 119
bin: 4.75e1
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GenotypeQuality
all individuals: 10
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GenotypeQuality
all individuals: 104
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GenotypeQuality
all individuals: 105
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GenotypeQuality
all individuals: 10
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GenotypeQuality
all individuals: 24
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GenotypeQuality
all individuals: 93
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GenotypeQuality
all individuals: 293
bin: 2.25e1
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GenotypeQuality
all individuals: 419
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GenotypeQuality
all individuals: 9003
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2207
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2036
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 954
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8606
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.505117399157134e-5
allele num: 66440
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9796
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16402
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.06e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.5e-3

QD
type: SiteQuality
SIO_000300: 9.68e0

FS
type: SiteQuality
SIO_000300: 3.473e0

MQRankSum
type: SiteQuality
SIO_000300: 1.88e0

BaseQRankSum
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SIO_000300: -2.536e0

ClippingRankSum
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SIO_000300: -1.361e0

VQSLOD
type: SiteQuality
SIO_000300: -4.217e-1

DP
type: SiteQuality
SIO_000300: 1.649154e6

GenotypeDepth
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variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 1.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8618
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.02082482645978e-4
allele num: 9796
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66538
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

InbreedingCoeff
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SIO_000300: 1.14e-2

QD
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MQRankSum
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FS
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BaseQRankSum
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ReadPosRankSum
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VQSLOD
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MQ
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SIO_000300: 6.0e1

ClippingRankSum
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SIO_000300: -1.301e0

DP
type: SiteQuality
SIO_000300: 1.652552e6

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 3

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9800
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 6.05766900896535e-5
allele num: 16508
num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 2.999130252226854e-5
allele num: 66686
num of homozygotes: 0

East Asian
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num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.657654e6

VQSLOD
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BaseQRankSum
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InbreedingCoeff
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SIO_000300: 1.13e-2

FS
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SIO_000300: 5.36e-1

MQRankSum
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SIO_000300: -7.8e-2

QD
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SIO_000300: 1.096e1

ClippingRankSum
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SIO_000300: 9.65e-1

ReadPosRankSum
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SIO_000300: -1.6e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66690
num of homozygotes: 0

South Asian
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allele count: 1
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allele num: 16508
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.99e-1

FS
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SIO_000300: 2.621e0

BaseQRankSum
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ClippingRankSum
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MQ
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SIO_000300: 5.968e1

QD
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SIO_000300: 9.73e0

MQRankSum
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SIO_000300: 7.52e-1

InbreedingCoeff
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SIO_000300: 1.05e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.87e0

DP
type: SiteQuality
SIO_000300: 1.657644e6

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 1
allele frequency: 1.020199959192002e-4
allele num: 9802
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66718
num of homozygotes: 0

East Asian
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num of homozygotes: 0

Other
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allele num: 900
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South Asian
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allele count: 0
allele frequency: 0.0e0
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Latino
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num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.800000000000001e-3

ReadPosRankSum
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DP
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FS
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SIO_000300: 3.376e0

MQRankSum
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ClippingRankSum
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MQ
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BaseQRankSum
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VQSLOD
type: SiteQuality
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QD
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SIO_000300: 1.295e1

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 1.498711108446736e-5
allele num: 66724
num of homozygotes: 0

Other
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FS
type: SiteQuality
SIO_000300: 8.68e-1

ReadPosRankSum
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InbreedingCoeff
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VQSLOD
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QD
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ClippingRankSum
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BaseQRankSum
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MQRankSum
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MQ
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DP
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GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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Latino
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South Asian
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European (Non-Finnish)
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Other
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MQ
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InbreedingCoeff
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ClippingRankSum
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FS
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QD
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VQSLOD
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MQRankSum
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ReadPosRankSum
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BaseQRankSum
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DP
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GenotypeDepth
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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European (Finnish)
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num of homozygotes: 0

African
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Latino
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European (Non-Finnish)
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Other
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BaseQRankSum
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FS
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ClippingRankSum
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QD
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MQ
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MQRankSum
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VQSLOD
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ReadPosRankSum
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DP
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InbreedingCoeff
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GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.25e1
variant carriers: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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South Asian
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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East Asian
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Other
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 2.996883241428914e-5
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ClippingRankSum
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MQ
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ReadPosRankSum
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FS
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InbreedingCoeff
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VQSLOD
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DP
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MQRankSum
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QD
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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European (Non-Finnish)
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Other
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African
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East Asian
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European (Finnish)
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Latino
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QD
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ReadPosRankSum
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MQRankSum
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InbreedingCoeff
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ClippingRankSum
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MQ
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VQSLOD
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FS
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BaseQRankSum
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DP
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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African
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South Asian
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European (Non-Finnish)
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Latino
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Other
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MQRankSum
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ClippingRankSum
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VQSLOD
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QD
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FS
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InbreedingCoeff
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BaseQRankSum
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ReadPosRankSum
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DP
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MQ
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GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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num of homozygotes: 0

Other
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Latino
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East Asian
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European (Finnish)
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South Asian
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European (Non-Finnish)
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BaseQRankSum
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MQRankSum
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ClippingRankSum
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MQ
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InbreedingCoeff
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DP
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FS
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ReadPosRankSum
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QD
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VQSLOD
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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num of homozygotes: 0

Latino
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East Asian
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South Asian
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Other
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European (Non-Finnish)
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European (Finnish)
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BaseQRankSum
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MQ
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FS
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ClippingRankSum
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MQRankSum
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DP
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InbreedingCoeff
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VQSLOD
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ReadPosRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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South Asian
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East Asian
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Other
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European (Finnish)
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European (Non-Finnish)
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Latino
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InbreedingCoeff
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ClippingRankSum
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BaseQRankSum
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ReadPosRankSum
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FS
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VQSLOD
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QD
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MQRankSum
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MQ
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DP
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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European (Non-Finnish)
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African
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European (Finnish)
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Latino
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South Asian
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East Asian
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VQSLOD
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FS
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MQRankSum
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ReadPosRankSum
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BaseQRankSum
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QD
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InbreedingCoeff
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MQ
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 4.75e1
variant carriers: 0

Latino
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allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9800
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66732
num of homozygotes: 0

East Asian
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allele count: 1
allele frequency: 1.159285879897983e-4
allele num: 8626
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.959e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.03e-1

ReadPosRankSum
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SIO_000300: 6.07e-1

InbreedingCoeff
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SIO_000300: 0.0e0

MQRankSum
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SIO_000300: -2.29e-1

VQSLOD
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FS
type: SiteQuality
SIO_000300: 7.53e-1

DP
type: SiteQuality
SIO_000300: 1.659373e6

QD
type: SiteQuality
SIO_000300: 1.275e1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.92e-1

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

East Asian
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allele count: 2
allele frequency: 2.318571759795966e-4
allele num: 8626
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9802
num of homozygotes: 0

South Asian
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allele count: 4
allele frequency: 2.422480620155039e-4
allele num: 16512
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66732
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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DP
type: SiteQuality
SIO_000300: 1.659617e6

VQSLOD
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ReadPosRankSum
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MQ
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InbreedingCoeff
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SIO_000300: -1.0e-4

FS
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SIO_000300: 1.793e0

ClippingRankSum
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SIO_000300: -3.48e-1

MQRankSum
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SIO_000300: 5.03e-1

QD
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SIO_000300: 1.354e1

BaseQRankSum
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SIO_000300: 3.1e0

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.498576352465158e-5
allele num: 66730
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9802
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

VQSLOD
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SIO_000300: -3.169e0

DP
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SIO_000300: 1.65942e6

InbreedingCoeff
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SIO_000300: 1.0e-4

MQ
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SIO_000300: 5.941e1

BaseQRankSum
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SIO_000300: -3.262e0

ReadPosRankSum
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SIO_000300: -9.370000000000001e-1

FS
type: SiteQuality
SIO_000300: 7.74e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.28e0

MQRankSum
type: SiteQuality
SIO_000300: 6.5e-1

QD
type: SiteQuality
SIO_000300: 3.23e0

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 5

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9802
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66732
num of homozygotes: 0

South Asian
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allele count: 5
allele frequency: 3.028100775193798e-4
allele num: 16512
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -8.500000000000001e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.3e-3

VQSLOD
type: SiteQuality
SIO_000300: 1.16e0

FS
type: SiteQuality
SIO_000300: 1.114e0

ClippingRankSum
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SIO_000300: -7.94e-1

DP
type: SiteQuality
SIO_000300: 1.659802e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.03e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.415e0

MQ
type: SiteQuality
SIO_000300: 5.967e1

QD
type: SiteQuality
SIO_000300: 1.175e1

GenotypeDepth
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66732
num of homozygotes: 0

African
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allele count: 1
allele frequency: 1.020199959192002e-4
allele num: 9802
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.659575e6

FS
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ClippingRankSum
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ReadPosRankSum
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MQRankSum
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MQ
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BaseQRankSum
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InbreedingCoeff
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QD
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VQSLOD
type: SiteQuality
SIO_000300: 2.09e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9800
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.111111111111111e-3
allele num: 900
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Latino
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allele count: 2
allele frequency: 1.727712508638562e-4
allele num: 11576
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66732
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.982e1

ReadPosRankSum
type: SiteQuality
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InbreedingCoeff
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FS
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MQRankSum
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DP
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QD
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BaseQRankSum
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SIO_000300: -3.89e0

VQSLOD
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ClippingRankSum
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 2.997152704930316e-5
allele num: 66730
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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African
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QD
type: SiteQuality
SIO_000300: 1.313e1

VQSLOD
type: SiteQuality
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MQRankSum
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ReadPosRankSum
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ClippingRankSum
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InbreedingCoeff
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BaseQRankSum
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DP
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MQ
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FS
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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South Asian
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allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66730
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.46e-1

InbreedingCoeff
type: SiteQuality
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ReadPosRankSum
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FS
type: SiteQuality
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MQ
type: SiteQuality
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BaseQRankSum
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VQSLOD
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DP
type: SiteQuality
SIO_000300: 1.659255e6

MQRankSum
type: SiteQuality
SIO_000300: 1.21e0

QD
type: SiteQuality
SIO_000300: 1.339e1

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 933
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498576352465158e-5
allele num: 66730
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9802
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

QD
type: SiteQuality
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FS
type: SiteQuality
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DP
type: SiteQuality
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MQRankSum
type: SiteQuality
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InbreedingCoeff
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ClippingRankSum
type: SiteQuality
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ReadPosRankSum
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SIO_000300: 1.79e0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.26e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -3.974e-1

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498576352465158e-5
allele num: 66730
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9800
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.74e-1

DP
type: SiteQuality
SIO_000300: 1.659308e6

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 6.39e0

MQRankSum
type: SiteQuality
SIO_000300: 1.46e0

VQSLOD
type: SiteQuality
SIO_000300: 5.5e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

QD
type: SiteQuality
SIO_000300: 1.049e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.6e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 3

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9802
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 2.591568762957844e-4
allele num: 11576
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66726
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.659312e6

QD
type: SiteQuality
SIO_000300: 1.429e1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.1e-1

FS
type: SiteQuality
SIO_000300: 6.944e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.850000000000001e-1

MQRankSum
type: SiteQuality
SIO_000300: -5.12e-1

MQ
type: SiteQuality
SIO_000300: 5.957e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 5.47e0

VQSLOD
type: SiteQuality
SIO_000300: 4.0e-1

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 9

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2010
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9802
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 9
allele frequency: 1.348718717218642e-4
allele num: 66730
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.28e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.89e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

MQ
type: SiteQuality
SIO_000300: 5.958e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.9e-2

VQSLOD
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: 4.4e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.659645e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.22e0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9802
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498576352465158e-5
allele num: 66730
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

ClippingRankSum
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BaseQRankSum
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DP
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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QD
type: SiteQuality
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InbreedingCoeff
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FS
type: SiteQuality
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MQRankSum
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VQSLOD
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MQ
type: SiteQuality
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GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
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allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Latino
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allele frequency: 1.728011059270779e-4
allele num: 11574
num of homozygotes: 0

South Asian
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MQRankSum
type: SiteQuality
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QD
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ClippingRankSum
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FS
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DP
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MQ
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BaseQRankSum
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VQSLOD
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ReadPosRankSum
type: SiteQuality
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InbreedingCoeff
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

South Asian
type: Population
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allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.020408163265306e-4
allele num: 9800
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.495863805299125e-5
allele num: 66728
num of homozygotes: 0

Other
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East Asian
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allele count: 0
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InbreedingCoeff
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MQRankSum
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FS
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ReadPosRankSum
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VQSLOD
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DP
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QD
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MQ
type: SiteQuality
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ClippingRankSum
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 205

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
type: Population
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allele frequency: 1.159285879897983e-4
allele num: 8626
num of homozygotes: 0

African
type: Population
allele count: 4
allele frequency: 4.082465809348847e-4
allele num: 9798
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Other
type: Population
allele count: 3
allele frequency: 3.333333333333334e-3
allele num: 900
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European (Non-Finnish)
type: Population
allele count: 164
allele frequency: 2.457738880230188e-3
allele num: 66728
num of homozygotes: 0

Latino
type: Population
allele count: 16
allele frequency: 1.382408847416624e-3
allele num: 11574
num of homozygotes: 0

European (Finnish)
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allele count: 2
allele frequency: 3.02571860816944e-4
allele num: 6610
num of homozygotes: 0

South Asian
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allele count: 15
allele frequency: 9.085402786190188e-4
allele num: 16510
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.36e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.22e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.03e-1

DP
type: SiteQuality
SIO_000300: 1.66565e6

QD
type: SiteQuality
SIO_000300: 1.439e1

MQ
type: SiteQuality
SIO_000300: 5.972e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.08e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.5e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 3.18e0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 1.25e1
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GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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bin: 1.75e1
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
all individuals: 1265
bin: 9.75e1
variant carriers: 1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9798
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.498711108446736e-5
allele num: 66724
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.769e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.93e-1

ReadPosRankSum
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SIO_000300: 1.25e0

BaseQRankSum
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SIO_000300: -3.764e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

FS
type: SiteQuality
SIO_000300: 1.095e0

MQRankSum
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SIO_000300: 1.3e0

DP
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SIO_000300: 1.657449e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -5.051e-1

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1960
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variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 2.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498800959232614e-5
allele num: 66720
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9798
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.701e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.63e0

MQ
type: SiteQuality
SIO_000300: 5.954e1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -3.22e-1

VQSLOD
type: SiteQuality
SIO_000300: -3.54e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

DP
type: SiteQuality
SIO_000300: 1.65567e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.73e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.95e0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 65
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1255
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 2123
bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9796
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66710
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.211680600993578e-4
allele num: 16506
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.155e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.29e0

VQSLOD
type: SiteQuality
SIO_000300: 3.13e-1

FS
type: SiteQuality
SIO_000300: 2.679e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.27e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.5e-3

MQRankSum
type: SiteQuality
SIO_000300: 4.08e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.35e0

DP
type: SiteQuality
SIO_000300: 1.653275e6

GenotypeQuality
all individuals: 112
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
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variant carriers: 0

GenotypeQuality
all individuals: 399
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variant carriers: 0

GenotypeQuality
all individuals: 43662
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variant carriers: 0

GenotypeQuality
all individuals: 48
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variant carriers: 0

GenotypeQuality
all individuals: 149
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variant carriers: 0

GenotypeQuality
all individuals: 352
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variant carriers: 0

GenotypeQuality
all individuals: 1912
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variant carriers: 0

GenotypeQuality
all individuals: 59
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variant carriers: 0

GenotypeQuality
all individuals: 90
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variant carriers: 0

GenotypeQuality
all individuals: 1
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variant carriers: 0

GenotypeQuality
all individuals: 44
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variant carriers: 0

GenotypeQuality
all individuals: 175
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variant carriers: 0

GenotypeQuality
all individuals: 10
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GenotypeQuality
all individuals: 177
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GenotypeQuality
all individuals: 8874
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variant carriers: 0

GenotypeQuality
all individuals: 2118
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variant carriers: 0

GenotypeQuality
all individuals: 93
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variant carriers: 0

GenotypeQuality
all individuals: 880
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variant carriers: 0

GenotypeQuality
all individuals: 1280
bin: 9.75e1
variant carriers: 41

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8616
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.641548565502938e-5
allele num: 11572
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 38
allele frequency: 5.696297406685654e-4
allele num: 66710
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.02082482645978e-4
allele num: 9796
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.11358574610245e-3
allele num: 898
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.654188e6

QD
type: SiteQuality
SIO_000300: 1.31e1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 4.23e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.57e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.8e-3

MQ
type: SiteQuality
SIO_000300: 5.966e1

MQRankSum
type: SiteQuality
SIO_000300: -1.01e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.29e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.78e-1

GenotypeQuality
all individuals: 43753
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 351
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variant carriers: 0

GenotypeQuality
all individuals: 1905
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 8884
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 155
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variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 7.5e0
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9794
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.643042350907519e-5
allele num: 11570
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66708
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.653197e6

BaseQRankSum
type: SiteQuality
SIO_000300: 6.1e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.9e-3

MQ
type: SiteQuality
SIO_000300: 5.798e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.25e0

MQRankSum
type: SiteQuality
SIO_000300: -2.7e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.09e-1

QD
type: SiteQuality
SIO_000300: 1.221e1

VQSLOD
type: SiteQuality
SIO_000300: -1.887e0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 1.02082482645978e-4
allele num: 9796
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66710
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8614
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.43e0

ClippingRankSum
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MQ
type: SiteQuality
SIO_000300: 5.937e1

VQSLOD
type: SiteQuality
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InbreedingCoeff
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DP
type: SiteQuality
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QD
type: SiteQuality
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FS
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: 6.26e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 1240
bin: 9.75e1
variant carriers: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9798
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.05766900896535e-5
allele num: 16508
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8616
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66710
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.2593e1

MQRankSum
type: SiteQuality
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InbreedingCoeff
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VQSLOD
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BaseQRankSum
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ReadPosRankSum
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MQ
type: SiteQuality
SIO_000300: 5.954e1

DP
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QD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -8.1e-2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9798
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66712
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Latino
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allele count: 1
allele frequency: 8.641548565502938e-5
allele num: 11572
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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VQSLOD
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MQRankSum
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ReadPosRankSum
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BaseQRankSum
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FS
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SIO_000300: 9.19e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

ClippingRankSum
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SIO_000300: 2.15e-1

MQ
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SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 8.609999999999999e0

DP
type: SiteQuality
SIO_000300: 1.653813e6

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 6.25e1
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8616
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9796
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66710
num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 6.058403004967891e-5
allele num: 16506
num of homozygotes: 0

DP
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SIO_000300: 1.654116e6

MQRankSum
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QD
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VQSLOD
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BaseQRankSum
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MQ
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SIO_000300: 6.0e1

ClippingRankSum
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SIO_000300: 1.59e0

ReadPosRankSum
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SIO_000300: 9.8e-2

FS
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SIO_000300: 0.0e0

InbreedingCoeff
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SIO_000300: 0.0e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498935755613514e-5
allele num: 66714
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8616
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 7.981e0

ReadPosRankSum
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SIO_000300: 4.21e-1

MQRankSum
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DP
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VQSLOD
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MQ
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SIO_000300: 5.965e1

ClippingRankSum
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SIO_000300: -1.944e0

BaseQRankSum
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SIO_000300: 1.78e0

QD
type: SiteQuality
SIO_000300: 1.664e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
type: Population
allele count: 4
allele frequency: 4.082465809348847e-4
allele num: 9798
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 8
allele frequency: 1.199112656634091e-4
allele num: 66716
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 5
allele frequency: 4.32152117545376e-4
allele num: 11570
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.11358574610245e-3
allele num: 898
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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DP
type: SiteQuality
SIO_000300: 1.654478e6

QD
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VQSLOD
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InbreedingCoeff
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ReadPosRankSum
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BaseQRankSum
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MQ
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ClippingRankSum
type: SiteQuality
SIO_000300: -5.8e-2

MQRankSum
type: SiteQuality
SIO_000300: 1.2e-2

FS
type: SiteQuality
SIO_000300: 5.22e-1

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.499205421126803e-5
allele num: 66702
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

DP
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SIO_000300: 1.654508e6

ClippingRankSum
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BaseQRankSum
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FS
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VQSLOD
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MQRankSum
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QD
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ReadPosRankSum
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MQ
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.75e1
variant carriers: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.498980693128672e-5
allele num: 66712
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8614
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.728608470181504e-4
allele num: 11570
num of homozygotes: 0

Other
type: Population
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FS
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QD
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BaseQRankSum
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InbreedingCoeff
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ClippingRankSum
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MQRankSum
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ReadPosRankSum
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DP
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VQSLOD
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MQ
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66714
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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African
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allele frequency: 1.020616452337212e-4
allele num: 9798
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South Asian
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FS
type: SiteQuality
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QD
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BaseQRankSum
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MQ
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InbreedingCoeff
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DP
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MQRankSum
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VQSLOD
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ReadPosRankSum
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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East Asian
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European (Finnish)
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allele frequency: 0.0e0
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African
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allele frequency: 1.020616452337212e-4
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European (Non-Finnish)
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allele frequency: 0.0e0
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ClippingRankSum
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QD
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FS
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MQRankSum
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MQ
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VQSLOD
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InbreedingCoeff
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DP
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ReadPosRankSum
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SIO_000300: -4.02e-1

BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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South Asian
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allele num: 16510
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European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 66716
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Latino
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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BaseQRankSum
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SIO_000300: 1.15e0

InbreedingCoeff
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MQ
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MQRankSum
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VQSLOD
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FS
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QD
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ClippingRankSum
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ReadPosRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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South Asian
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Latino
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East Asian
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allele num: 8618
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European (Non-Finnish)
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allele frequency: 2.99805126667666e-5
allele num: 66710
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Other
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InbreedingCoeff
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ClippingRankSum
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MQRankSum
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MQ
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BaseQRankSum
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VQSLOD
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ReadPosRankSum
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QD
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DP
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SIO_000300: 1.65562e6

FS
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SIO_000300: 1.0579e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 17
allele frequency: 2.548267178318743e-4
allele num: 66712
num of homozygotes: 0

South Asian
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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African
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Latino
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num of homozygotes: 0

Other
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num of homozygotes: 0

ReadPosRankSum
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SIO_000300: 1.87e-1

MQ
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SIO_000300: 5.958e1

QD
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VQSLOD
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FS
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InbreedingCoeff
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BaseQRankSum
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DP
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SIO_000300: 1.656021e6

ClippingRankSum
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SIO_000300: -3.72e-1

MQRankSum
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66714
num of homozygotes: 0

East Asian
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allele frequency: 1.508120649651972e-3
allele num: 8620
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European (Finnish)
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Latino
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African
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South Asian
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Other
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FS
type: SiteQuality
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ReadPosRankSum
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ClippingRankSum
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MQ
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MQRankSum
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DP
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InbreedingCoeff
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VQSLOD
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QD
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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East Asian
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Other
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European (Non-Finnish)
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African
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South Asian
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BaseQRankSum
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MQRankSum
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QD
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ReadPosRankSum
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InbreedingCoeff
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FS
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ClippingRankSum
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DP
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MQ
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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Latino
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European (Finnish)
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East Asian
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Other
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African
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European (Non-Finnish)
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MQ
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ReadPosRankSum
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FS
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InbreedingCoeff
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ClippingRankSum
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BaseQRankSum
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VQSLOD
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DP
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MQRankSum
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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num of homozygotes: 0

East Asian
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South Asian
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Other
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Latino
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African
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European (Non-Finnish)
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QD
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DP
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MQRankSum
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VQSLOD
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ReadPosRankSum
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MQ
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BaseQRankSum
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InbreedingCoeff
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ClippingRankSum
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FS
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
all individuals: 849
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 329
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44526
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 86
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 83
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1993
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1223
bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 368
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1832
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8768
bin: 6.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9802
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498800959232614e-5
allele num: 66720
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.68e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 9.02e-1

QD
type: SiteQuality
SIO_000300: 1.244e1

MQRankSum
type: SiteQuality
SIO_000300: -3.775e0

MQ
type: SiteQuality
SIO_000300: 5.254e1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.656153e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.67e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.58e0

GenotypeQuality
all individuals: 44575
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 76
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1223
bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1993
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 846
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 368
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 5.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498800959232614e-5
allele num: 66720
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9802
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.54e-1

MQ
type: SiteQuality
SIO_000300: 5.317e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.0e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.96e-1

DP
type: SiteQuality
SIO_000300: 1.656165e6

MQRankSum
type: SiteQuality
SIO_000300: -3.843e0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 6.11e0

VQSLOD
type: SiteQuality
SIO_000300: 1.61e0

GenotypeQuality
all individuals: 40
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 366
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1987
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1222
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1831
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8757
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 86
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 846
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44585
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 326
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9804
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.159823706796567e-4
allele num: 8622
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66714
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.1e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 1.39e0

VQSLOD
type: SiteQuality
SIO_000300: -3.951e-1

FS
type: SiteQuality
SIO_000300: 2.732e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.215e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.4e-2

DP
type: SiteQuality
SIO_000300: 1.657268e6

MQRankSum
type: SiteQuality
SIO_000300: 2.96e-1

QD
type: SiteQuality
SIO_000300: 1.667e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 1223
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 326
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 845
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1832
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44658
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1982
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8759
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 367
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.496402877697842e-5
allele num: 66720
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.05766900896535e-5
allele num: 16508
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9804
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -5.7e-2

VQSLOD
type: SiteQuality
SIO_000300: 7.13e-1

FS
type: SiteQuality
SIO_000300: 9.486000000000001e0

BaseQRankSum
type: SiteQuality
SIO_000300: 6.32e-1

MQ
type: SiteQuality
SIO_000300: 5.959e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.47e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.51e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.1e-3

QD
type: SiteQuality
SIO_000300: 1.32e1

DP
type: SiteQuality
SIO_000300: 1.657591e6

GenotypeQuality
all individuals: 39
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33
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variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8755
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 44757
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 326
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1835
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 365
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 841
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1990
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1221
bin: 9.75e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9804
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.159554730983302e-4
allele num: 8624
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66724
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.936e0

MQRankSum
type: SiteQuality
SIO_000300: 5.1e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.6e-3

VQSLOD
type: SiteQuality
SIO_000300: -8.77e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 1.69e0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.95e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.14e0

QD
type: SiteQuality
SIO_000300: 1.52e1

DP
type: SiteQuality
SIO_000300: 1.657873e6

GenotypeQuality
all individuals: 839
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 45032
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1986
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variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1222
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 5.75e1
variant carriers: 0