http://identifiers.org/exac.variant/1-19282716-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19282716
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 19282716
    reference: chr 1
allele count: 27
allele frequency: 2.495840266222962e-3
allele num: 10818
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000169991
  ensembl protein: ENSP00000387941
  ensembl transcript: ENST00000455833
  gene symbol: IFFO2
  hgvsc: ENST00000455833.2:c.111G>T
  hgvsp: ENST00000455833.2:c.111G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/27006
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3748
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 862
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2735
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 190
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 654
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 157
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2711
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 210
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 249
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3913
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 9.75e1
  variant carriers: 27
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Pro37Pro
num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 1
  allele frequency: 3.55366027007818e-4
  allele num: 2814
  num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 212
  num of homozygotes: 0
population: South Asian
population: East Asian
population: Latino
population: Other
population: European (Finnish)
reference allele: C
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: ReadPosRankSum

1-19282720-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19282720
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 19282720
    reference: chr 1
allele count: 7
allele frequency: 6.540833489067464e-4
allele num: 10702
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000169991
  ensembl protein: ENSP00000387941
  ensembl transcript: ENST00000455833
  gene symbol: IFFO2
  hgvsc: ENST00000455833.2:c.107G>C
  hgvsp: ENSP00000387941.2:p.Gly36Ala
  variant of: http://identifiers.org/hgnc/27006
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3499
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 505
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2044
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 964
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 156
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 139
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 309
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 159
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 182
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2026
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 601
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3639
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 9.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 114
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Gly36Ala
num of homozygotes: 1
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 204
  num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 92
  num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: DP

1-19282725-CCCG-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19282725
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 19282722
    reference: chr 1
allele count: 10
allele frequency: 9.825112988799372e-4
allele num: 10178
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: inframe_deletion
  ensembl gene: ENSG00000169991
  ensembl protein: ENSP00000387941
  ensembl transcript: ENST00000455833
  gene symbol: IFFO2
  hgvsc: ENST00000455833.2:c.99_101delCGG
  hgvsp: ENSP00000387941.2:p.Gly34del
  variant of: http://identifiers.org/hgnc/27006
canonical: true
consequence: inframe deletion
filter: VQSRTrancheINDEL95.00to96.00
genotype depth: GenotypeDepth
  all individuals: 2716
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1342
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 984
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 882
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 246
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 427
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 131
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2404
  bin: 6.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 127
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 348
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 201
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1381
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 8.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 7.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Gly34del
num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 118
  num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 88
  num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Other
reference allele: CCCG
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum

1-19282725-CCCGCCG-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19282725
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 19282719
    reference: chr 1
allele count: 5
allele frequency: 4.912556494399686e-4
allele num: 10178
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: inframe_deletion
  ensembl gene: ENSG00000169991
  ensembl protein: ENSP00000387941
  ensembl transcript: ENST00000455833
  gene symbol: IFFO2
  hgvsc: ENST00000455833.2:c.96_101delCGGCGG
  hgvsp: ENSP00000387941.2:p.Gly33_Gly34del
  variant of: http://identifiers.org/hgnc/27006
canonical: true
consequence: inframe deletion
filter: VQSRTrancheINDEL95.00to96.00
genotype depth: GenotypeDepth
  all individuals: 984
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1342
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2716
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 246
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 348
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 201
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1381
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2404
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 127
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 131
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 9.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 882
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 427
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Gly33_Gly34del
num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 2476
  num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 190
  num of homozygotes: 0
population: Other
population: Latino
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: CCCGCCG
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff

1-19282749-AGGGCAGCCCCCGCCGCCGCCGCCCGGC-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19282749
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 19282722
    reference: chr 1
allele count: 1
allele frequency: 4.128819157720892e-4
allele num: 2422
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: inframe_deletion
  ensembl gene: ENSG00000169991
  ensembl protein: ENSP00000387941
  ensembl transcript: ENST00000455833
  gene symbol: IFFO2
  hgvsp: ENSP00000387941.2:p.Pro18_Pro26del
  variant of: http://identifiers.org/hgnc/27006
canonical: true
consequence: inframe deletion
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 1370
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2114
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 661
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 111
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2907
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 143
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 299
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 530
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1047
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Pro18_Pro26del
num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 12
  num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 20
  num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: South Asian
reference allele: AGGGCAGCCCCCGCCGCCGCCGCCCGGC
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: DP

1-19282759-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19282759
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 19282759
    reference: chr 1
allele count: 2
allele frequency: 1.76056338028169e-3
allele num: 1136
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000169991
  ensembl protein: ENSP00000387941
  ensembl transcript: ENST00000455833
  gene symbol: IFFO2
  hgvsc: ENST00000455833.2:c.68G>A
  hgvsp: ENSP00000387941.2:p.Gly23Glu
  variant of: http://identifiers.org/hgnc/27006
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2886
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1771
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 504
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1072
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3159
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 304
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 210
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Gly23Glu
num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 2
  allele frequency: 2.173913043478261e-3
  allele num: 920
  num of homozygotes: 0
population: Other
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 18
  num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: African
reference allele: C
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum

1-19282829-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19282829
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 19282829
    reference: chr 1
allele count: 1
allele frequency: 6.720430107526882e-4
allele num: 1488
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000169991
  ensembl protein: ENSP00000387941
  ensembl transcript: ENST00000455833
  gene symbol: IFFO2
  hgvsc: ENST00000455833.2:c.-3C>T
  variant of: http://identifiers.org/hgnc/27006
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2024
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 704
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3044
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3089
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 191
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2162
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 124
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 151
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 1
  allele frequency: 9.140767824497258e-4
  allele num: 1094
  num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 24
  num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 44
  num of homozygotes: 0
population: European (Finnish)
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum

1-19401275-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19401275
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 19401275
    reference: chr 1
allele count: 1
allele frequency: 9.131085868731509e-6
allele num: 109516
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364373
  ensembl transcript: ENST00000375225
  gene symbol: UBR4
  hgvsc: ENST00000375225.3:c.*51C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364372
  ensembl transcript: ENST00000375224
  gene symbol: UBR4
  hgvsc: ENST00000375224.1:c.*51C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364416
  ensembl transcript: ENST00000375267
  gene symbol: UBR4
  hgvsc: ENST00000375267.2:c.*51C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000394173
  ensembl transcript: ENST00000429347
  gene symbol: UBR4
  hgvsc: ENST00000429347.2:c.*51C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364374
  ensembl transcript: ENST00000375226
  gene symbol: UBR4
  hgvsc: ENST00000375226.2:c.*51C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364403
  ensembl transcript: ENST00000375254
  gene symbol: UBR4
  hgvsc: ENST00000375254.3:c.*51C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000127481
  ensembl transcript: ENST00000459947
  gene symbol: UBR4
  hgvsc: ENST00000459947.1:n.3610C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000272084
  ensembl transcript: ENST00000606379
  gene symbol: RP5-1126H10.2
  hgvsc: ENST00000606379.1:n.731C>T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364365
  ensembl transcript: ENST00000375217
  gene symbol: UBR4
  hgvsc: ENST00000375217.2:c.*51C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000127481
  ensembl transcript: ENST00000486515
  gene symbol: UBR4
  hgvsc: ENST00000486515.1:n.322C>T
  variant of: http://identifiers.org/hgnc/30313
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5214
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9617
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1237
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 804
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13664
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14067
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1165
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1222
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1085
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5469
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2465
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1518
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 767
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4807
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5813
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3194
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 169
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Other
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP

1-19401277-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19401277
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 19401277
    reference: chr 1
allele count: 1
allele frequency: 9.251549634563789e-6
allele num: 108090
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364374
  ensembl transcript: ENST00000375226
  gene symbol: UBR4
  hgvsc: ENST00000375226.2:c.*49A>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364365
  ensembl transcript: ENST00000375217
  gene symbol: UBR4
  hgvsc: ENST00000375217.2:c.*49A>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364373
  ensembl transcript: ENST00000375225
  gene symbol: UBR4
  hgvsc: ENST00000375225.3:c.*49A>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000127481
  ensembl transcript: ENST00000486515
  gene symbol: UBR4
  hgvsc: ENST00000486515.1:n.320A>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364372
  ensembl transcript: ENST00000375224
  gene symbol: UBR4
  hgvsc: ENST00000375224.1:c.*49A>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000394173
  ensembl transcript: ENST00000429347
  gene symbol: UBR4
  hgvsc: ENST00000429347.2:c.*49A>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364416
  ensembl transcript: ENST00000375267
  gene symbol: UBR4
  hgvsc: ENST00000375267.2:c.*49A>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000127481
  ensembl transcript: ENST00000459947
  gene symbol: UBR4
  hgvsc: ENST00000459947.1:n.3608A>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000272084
  ensembl transcript: ENST00000606379
  gene symbol: RP5-1126H10.2
  hgvsc: ENST00000606379.1:n.729A>T
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364403
  ensembl transcript: ENST00000375254
  gene symbol: UBR4
  hgvsc: ENST00000375254.3:c.*49A>T
  variant of: http://identifiers.org/hgnc/30313
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1220
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13760
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1520
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5184
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5424
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1085
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9983
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13696
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 804
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2457
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1165
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1233
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 766
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8476
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5419
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3870
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1348
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Other
population: South Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: African
reference allele: T
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff

1-19401287-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19401287
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 19401287
    reference: chr 1
allele count: 1
allele frequency: 9.099181073703366e-6
allele num: 109900
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364373
  ensembl transcript: ENST00000375225
  gene symbol: UBR4
  hgvsc: ENST00000375225.3:c.*39C>G
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364403
  ensembl transcript: ENST00000375254
  gene symbol: UBR4
  hgvsc: ENST00000375254.3:c.*39C>G
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364365
  ensembl transcript: ENST00000375217
  gene symbol: UBR4
  hgvsc: ENST00000375217.2:c.*39C>G
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000272084
  ensembl transcript: ENST00000606379
  gene symbol: RP5-1126H10.2
  hgvsc: ENST00000606379.1:n.719C>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000127481
  ensembl transcript: ENST00000486515
  gene symbol: UBR4
  hgvsc: ENST00000486515.1:n.310C>G
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364374
  ensembl transcript: ENST00000375226
  gene symbol: UBR4
  hgvsc: ENST00000375226.2:c.*39C>G
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364372
  ensembl transcript: ENST00000375224
  gene symbol: UBR4
  hgvsc: ENST00000375224.1:c.*39C>G
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364416
  ensembl transcript: ENST00000375267
  gene symbol: UBR4
  hgvsc: ENST00000375267.2:c.*39C>G
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000394173
  ensembl transcript: ENST00000429347
  gene symbol: UBR4
  hgvsc: ENST00000429347.2:c.*39C>G
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000127481
  ensembl transcript: ENST00000459947
  gene symbol: UBR4
  hgvsc: ENST00000459947.1:n.3598C>G
  variant of: http://identifiers.org/hgnc/30313
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1239
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2635
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12848
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1223
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5076
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7859
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1528
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 766
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6283
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15880
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 804
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1085
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1164
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3515
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1243
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 327
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 306
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
population: Other
population: African
reference allele: G
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: DP

1-19401295-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19401295
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 19401295
    reference: chr 1
allele count: 1
allele frequency: 9.013393903340364e-6
allele num: 110946
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000127481
  ensembl transcript: ENST00000459947
  gene symbol: UBR4
  hgvsc: ENST00000459947.1:n.3590G>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364373
  ensembl transcript: ENST00000375225
  gene symbol: UBR4
  hgvsc: ENST00000375225.3:c.*31G>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000272084
  ensembl transcript: ENST00000606379
  gene symbol: RP5-1126H10.2
  hgvsc: ENST00000606379.1:n.711G>A
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364403
  ensembl transcript: ENST00000375254
  gene symbol: UBR4
  hgvsc: ENST00000375254.3:c.*31G>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364416
  ensembl transcript: ENST00000375267
  gene symbol: UBR4
  hgvsc: ENST00000375267.2:c.*31G>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000394173
  ensembl transcript: ENST00000429347
  gene symbol: UBR4
  hgvsc: ENST00000429347.2:c.*31G>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364365
  ensembl transcript: ENST00000375217
  gene symbol: UBR4
  hgvsc: ENST00000375217.2:c.*31G>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364372
  ensembl transcript: ENST00000375224
  gene symbol: UBR4
  hgvsc: ENST00000375224.1:c.*31G>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364374
  ensembl transcript: ENST00000375226
  gene symbol: UBR4
  hgvsc: ENST00000375226.2:c.*31G>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000127481
  ensembl transcript: ENST00000486515
  gene symbol: UBR4
  hgvsc: ENST00000486515.1:n.302G>A
  variant of: http://identifiers.org/hgnc/30313
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 804
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4851
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1242
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1164
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1222
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7339
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21589
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1087
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3957
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2892
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 766
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10057
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1546
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1739
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21621
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 195
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1196
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum

1-19401296-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19401296
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 19401296
    reference: chr 1
allele count: 6
allele frequency: 5.394228175851839e-5
allele num: 111230
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000272084
  ensembl transcript: ENST00000606379
  gene symbol: RP5-1126H10.2
  hgvsc: ENST00000606379.1:n.710C>T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364372
  ensembl transcript: ENST00000375224
  gene symbol: UBR4
  hgvsc: ENST00000375224.1:c.*30C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364416
  ensembl transcript: ENST00000375267
  gene symbol: UBR4
  hgvsc: ENST00000375267.2:c.*30C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364365
  ensembl transcript: ENST00000375217
  gene symbol: UBR4
  hgvsc: ENST00000375217.2:c.*30C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364374
  ensembl transcript: ENST00000375226
  gene symbol: UBR4
  hgvsc: ENST00000375226.2:c.*30C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000394173
  ensembl transcript: ENST00000429347
  gene symbol: UBR4
  hgvsc: ENST00000429347.2:c.*30C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000127481
  ensembl transcript: ENST00000459947
  gene symbol: UBR4
  hgvsc: ENST00000459947.1:n.3589C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000127481
  ensembl transcript: ENST00000486515
  gene symbol: UBR4
  hgvsc: ENST00000486515.1:n.301C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364403
  ensembl transcript: ENST00000375254
  gene symbol: UBR4
  hgvsc: ENST00000375254.3:c.*30C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364373
  ensembl transcript: ENST00000375225
  gene symbol: UBR4
  hgvsc: ENST00000375225.3:c.*30C>T
  variant of: http://identifiers.org/hgnc/30313
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1088
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9207
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 805
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2961
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 765
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3289
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1242
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1164
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7557
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1223
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22932
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1548
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4755
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4115
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23672
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4012
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 185
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: European (Non-Finnish)
population: South Asian
population: Latino
population: Other
population: European (Finnish)
reference allele: G
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: ReadPosRankSum

1-19401302-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19401302
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 19401302
    reference: chr 1
allele count: 2
allele frequency: 1.780278079436008e-5
allele num: 112342
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000444070
  ensembl transcript: ENST00000543981
  gene symbol: UBR4
  hgvsc: ENST00000543981.1:c.*24C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000127481
  ensembl transcript: ENST00000486515
  gene symbol: UBR4
  hgvsc: ENST00000486515.1:n.295C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364403
  ensembl transcript: ENST00000375254
  gene symbol: UBR4
  hgvsc: ENST00000375254.3:c.*24C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364374
  ensembl transcript: ENST00000375226
  gene symbol: UBR4
  hgvsc: ENST00000375226.2:c.*24C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000394173
  ensembl transcript: ENST00000429347
  gene symbol: UBR4
  hgvsc: ENST00000429347.2:c.*24C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364416
  ensembl transcript: ENST00000375267
  gene symbol: UBR4
  hgvsc: ENST00000375267.2:c.*24C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000272084
  ensembl transcript: ENST00000606379
  gene symbol: RP5-1126H10.2
  hgvsc: ENST00000606379.1:n.704C>T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364372
  ensembl transcript: ENST00000375224
  gene symbol: UBR4
  hgvsc: ENST00000375224.1:c.*24C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364373
  ensembl transcript: ENST00000375225
  gene symbol: UBR4
  hgvsc: ENST00000375225.3:c.*24C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364365
  ensembl transcript: ENST00000375217
  gene symbol: UBR4
  hgvsc: ENST00000375217.2:c.*24C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000127481
  ensembl transcript: ENST00000459947
  gene symbol: UBR4
  hgvsc: ENST00000459947.1:n.3583C>T
  variant of: http://identifiers.org/hgnc/30313
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1087
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1164
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 765
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4246
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1224
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6641
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8333
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2056
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3200
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 26227
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1577
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1244
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 805
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4411
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 573
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Other
population: African
reference allele: G
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP

1-19401304-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19401304
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 19401304
    reference: chr 1
allele count: 6
allele frequency: 5.314625850340136e-5
allele num: 112896
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000444070
  ensembl transcript: ENST00000543981
  gene symbol: UBR4
  hgvsc: ENST00000543981.1:c.*22G>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364416
  ensembl transcript: ENST00000375267
  gene symbol: UBR4
  hgvsc: ENST00000375267.2:c.*22G>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364373
  ensembl transcript: ENST00000375225
  gene symbol: UBR4
  hgvsc: ENST00000375225.3:c.*22G>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364374
  ensembl transcript: ENST00000375226
  gene symbol: UBR4
  hgvsc: ENST00000375226.2:c.*22G>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364372
  ensembl transcript: ENST00000375224
  gene symbol: UBR4
  hgvsc: ENST00000375224.1:c.*22G>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000394173
  ensembl transcript: ENST00000429347
  gene symbol: UBR4
  hgvsc: ENST00000429347.2:c.*22G>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364403
  ensembl transcript: ENST00000375254
  gene symbol: UBR4
  hgvsc: ENST00000375254.3:c.*22G>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364365
  ensembl transcript: ENST00000375217
  gene symbol: UBR4
  hgvsc: ENST00000375217.2:c.*22G>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000127481
  ensembl transcript: ENST00000459947
  gene symbol: UBR4
  hgvsc: ENST00000459947.1:n.3581G>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000272084
  ensembl transcript: ENST00000606379
  gene symbol: RP5-1126H10.2
  hgvsc: ENST00000606379.1:n.702G>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000127481
  ensembl transcript: ENST00000486515
  gene symbol: UBR4
  hgvsc: ENST00000486515.1:n.293G>A
  variant of: http://identifiers.org/hgnc/30313
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1700
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27118
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1251
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1165
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1228
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3999
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 805
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 765
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3324
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5761
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8799
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1586
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1087
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 552
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: African
population: Other
population: European (Finnish)
reference allele: C
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum

1-19401305-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19401305
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 19401305
    reference: chr 1
allele count: 26
allele frequency: 2.296170693796807e-4
allele num: 113232
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364373
  ensembl transcript: ENST00000375225
  gene symbol: UBR4
  hgvsc: ENST00000375225.3:c.*21C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364416
  ensembl transcript: ENST00000375267
  gene symbol: UBR4
  hgvsc: ENST00000375267.2:c.*21C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000127481
  ensembl transcript: ENST00000486515
  gene symbol: UBR4
  hgvsc: ENST00000486515.1:n.292C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364403
  ensembl transcript: ENST00000375254
  gene symbol: UBR4
  hgvsc: ENST00000375254.3:c.*21C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364374
  ensembl transcript: ENST00000375226
  gene symbol: UBR4
  hgvsc: ENST00000375226.2:c.*21C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000444070
  ensembl transcript: ENST00000543981
  gene symbol: UBR4
  hgvsc: ENST00000543981.1:c.*21C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000394173
  ensembl transcript: ENST00000429347
  gene symbol: UBR4
  hgvsc: ENST00000429347.2:c.*21C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364365
  ensembl transcript: ENST00000375217
  gene symbol: UBR4
  hgvsc: ENST00000375217.2:c.*21C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000272084
  ensembl transcript: ENST00000606379
  gene symbol: RP5-1126H10.2
  hgvsc: ENST00000606379.1:n.701C>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000127481
  ensembl transcript: ENST00000459947
  gene symbol: UBR4
  hgvsc: ENST00000459947.1:n.3580C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364372
  ensembl transcript: ENST00000375224
  gene symbol: UBR4
  hgvsc: ENST00000375224.1:c.*21C>T
  variant of: http://identifiers.org/hgnc/30313
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9078
  bin: 2.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 3845
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1653
  bin: 1.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1228
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3452
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27293
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 807
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 764
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1594
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1163
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1088
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5372
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1253
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2378
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28237
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: South Asian
population: Latino
population: African
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: MQ
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum

1-19401307-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19401307
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 19401307
    reference: chr 1
allele count: 5
allele frequency: 4.392592332290825e-5
allele num: 113828
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000444070
  ensembl transcript: ENST00000543981
  gene symbol: UBR4
  hgvsc: ENST00000543981.1:c.*19G>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364365
  ensembl transcript: ENST00000375217
  gene symbol: UBR4
  hgvsc: ENST00000375217.2:c.*19G>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000272084
  ensembl transcript: ENST00000606379
  gene symbol: RP5-1126H10.2
  hgvsc: ENST00000606379.1:n.699G>A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364373
  ensembl transcript: ENST00000375225
  gene symbol: UBR4
  hgvsc: ENST00000375225.3:c.*19G>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364374
  ensembl transcript: ENST00000375226
  gene symbol: UBR4
  hgvsc: ENST00000375226.2:c.*19G>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364403
  ensembl transcript: ENST00000375254
  gene symbol: UBR4
  hgvsc: ENST00000375254.3:c.*19G>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364416
  ensembl transcript: ENST00000375267
  gene symbol: UBR4
  hgvsc: ENST00000375267.2:c.*19G>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000394173
  ensembl transcript: ENST00000429347
  gene symbol: UBR4
  hgvsc: ENST00000429347.2:c.*19G>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000127481
  ensembl transcript: ENST00000459947
  gene symbol: UBR4
  hgvsc: ENST00000459947.1:n.3578G>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000127481
  ensembl transcript: ENST00000486515
  gene symbol: UBR4
  hgvsc: ENST00000486515.1:n.290G>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364372
  ensembl transcript: ENST00000375224
  gene symbol: UBR4
  hgvsc: ENST00000375224.1:c.*19G>A
  variant of: http://identifiers.org/hgnc/30313
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 28116
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1256
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1604
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3593
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1089
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1227
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3499
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1163
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9399
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1427
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 765
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 805
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4661
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4295
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: Other
population: South Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: East Asian
reference allele: C
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum

1-19401308-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19401308
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 19401308
    reference: chr 1
allele count: 3
allele frequency: 2.629088232201073e-5
allele num: 114108
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364373
  ensembl transcript: ENST00000375225
  gene symbol: UBR4
  hgvsc: ENST00000375225.3:c.*18C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000127481
  ensembl transcript: ENST00000459947
  gene symbol: UBR4
  hgvsc: ENST00000459947.1:n.3577C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000394173
  ensembl transcript: ENST00000429347
  gene symbol: UBR4
  hgvsc: ENST00000429347.2:c.*18C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000272084
  ensembl transcript: ENST00000606379
  gene symbol: RP5-1126H10.2
  hgvsc: ENST00000606379.1:n.698C>T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364372
  ensembl transcript: ENST00000375224
  gene symbol: UBR4
  hgvsc: ENST00000375224.1:c.*18C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364403
  ensembl transcript: ENST00000375254
  gene symbol: UBR4
  hgvsc: ENST00000375254.3:c.*18C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364374
  ensembl transcript: ENST00000375226
  gene symbol: UBR4
  hgvsc: ENST00000375226.2:c.*18C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364365
  ensembl transcript: ENST00000375217
  gene symbol: UBR4
  hgvsc: ENST00000375217.2:c.*18C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000444070
  ensembl transcript: ENST00000543981
  gene symbol: UBR4
  hgvsc: ENST00000543981.1:c.*18C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000127481
  ensembl transcript: ENST00000486515
  gene symbol: UBR4
  hgvsc: ENST00000486515.1:n.289C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364416
  ensembl transcript: ENST00000375267
  gene symbol: UBR4
  hgvsc: ENST00000375267.2:c.*18C>T
  variant of: http://identifiers.org/hgnc/30313
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1089
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1164
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1341
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4346
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3451
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 805
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9658
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1608
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3595
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28308
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1257
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 765
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1226
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1749
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 480
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: South Asian
population: African
population: European (Finnish)
population: East Asian
population: Other
reference allele: G
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum

1-19401315-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19401315
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 19401315
    reference: chr 1
allele count: 2
allele frequency: 1.727831916511162e-5
allele num: 115752
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364374
  ensembl transcript: ENST00000375226
  gene symbol: UBR4
  hgvsc: ENST00000375226.2:c.*11G>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000394173
  ensembl transcript: ENST00000429347
  gene symbol: UBR4
  hgvsc: ENST00000429347.2:c.*11G>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364365
  ensembl transcript: ENST00000375217
  gene symbol: UBR4
  hgvsc: ENST00000375217.2:c.*11G>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364372
  ensembl transcript: ENST00000375224
  gene symbol: UBR4
  hgvsc: ENST00000375224.1:c.*11G>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364403
  ensembl transcript: ENST00000375254
  gene symbol: UBR4
  hgvsc: ENST00000375254.3:c.*11G>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364373
  ensembl transcript: ENST00000375225
  gene symbol: UBR4
  hgvsc: ENST00000375225.3:c.*11G>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000444070
  ensembl transcript: ENST00000543981
  gene symbol: UBR4
  hgvsc: ENST00000543981.1:c.*11G>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364416
  ensembl transcript: ENST00000375267
  gene symbol: UBR4
  hgvsc: ENST00000375267.2:c.*11G>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000272084
  ensembl transcript: ENST00000606379
  gene symbol: RP5-1126H10.2
  hgvsc: ENST00000606379.1:n.691G>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000127481
  ensembl transcript: ENST00000459947
  gene symbol: UBR4
  hgvsc: ENST00000459947.1:n.3570G>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000127481
  ensembl transcript: ENST00000486515
  gene symbol: UBR4
  hgvsc: ENST00000486515.1:n.282G>A
  variant of: http://identifiers.org/hgnc/30313
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1610
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 30256
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2736
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 805
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 765
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 896
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1089
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1259
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1225
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2776
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10360
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1163
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3697
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 598
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 321
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Other
population: Latino
reference allele: C
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum

1-19401319-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19401319
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 19401319
    reference: chr 1
allele count: 1
allele frequency: 8.58619682997613e-6
allele num: 116466
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364403
  ensembl transcript: ENST00000375254
  gene symbol: UBR4
  hgvsc: ENST00000375254.3:c.*7C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000444070
  ensembl transcript: ENST00000543981
  gene symbol: UBR4
  hgvsc: ENST00000543981.1:c.*7C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364416
  ensembl transcript: ENST00000375267
  gene symbol: UBR4
  hgvsc: ENST00000375267.2:c.*7C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364373
  ensembl transcript: ENST00000375225
  gene symbol: UBR4
  hgvsc: ENST00000375225.3:c.*7C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364365
  ensembl transcript: ENST00000375217
  gene symbol: UBR4
  hgvsc: ENST00000375217.2:c.*7C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000394173
  ensembl transcript: ENST00000429347
  gene symbol: UBR4
  hgvsc: ENST00000429347.2:c.*7C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364372
  ensembl transcript: ENST00000375224
  gene symbol: UBR4
  hgvsc: ENST00000375224.1:c.*7C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000127481
  ensembl transcript: ENST00000486515
  gene symbol: UBR4
  hgvsc: ENST00000486515.1:n.278C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000272084
  ensembl transcript: ENST00000606379
  gene symbol: RP5-1126H10.2
  hgvsc: ENST00000606379.1:n.687C>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000127481
  ensembl transcript: ENST00000459947
  gene symbol: UBR4
  hgvsc: ENST00000459947.1:n.3566C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364374
  ensembl transcript: ENST00000375226
  gene symbol: UBR4
  hgvsc: ENST00000375226.2:c.*7C>T
  variant of: http://identifiers.org/hgnc/30313
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1617
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2305
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30900
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 765
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 805
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2397
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1089
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1226
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1257
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1162
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3719
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 814
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10587
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 658
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: South Asian
reference allele: G
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ

1-19401331-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19401331
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 19401331
    reference: chr 1
allele count: 32
allele frequency: 2.713474094802001e-4
allele num: 117930
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000127481
  ensembl transcript: ENST00000486515
  gene symbol: UBR4
  hgvsc: ENST00000486515.1:n.266C>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364365
  ensembl transcript: ENST00000375217
  gene symbol: UBR4
  hgvsc: ENST00000375217.2:c.15526C>A
  hgvsp: ENSP00000364365.2:p.Pro5176Thr
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364403
  ensembl transcript: ENST00000375254
  gene symbol: UBR4
  hgvsc: ENST00000375254.3:c.15547C>A
  hgvsp: ENSP00000364403.3:p.Pro5183Thr
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364416
  ensembl transcript: ENST00000375267
  gene symbol: UBR4
  hgvsc: ENST00000375267.2:c.15610C>A
  hgvsp: ENSP00000364416.2:p.Pro5204Thr
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000272084
  ensembl transcript: ENST00000606379
  gene symbol: RP5-1126H10.2
  hgvsc: ENST00000606379.1:n.675C>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000127481
  ensembl transcript: ENST00000459947
  gene symbol: UBR4
  hgvsc: ENST00000459947.1:n.3554C>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364374
  ensembl transcript: ENST00000375226
  gene symbol: UBR4
  hgvsc: ENST00000375226.2:c.15475C>A
  hgvsp: ENSP00000364374.2:p.Pro5159Thr
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364373
  ensembl transcript: ENST00000375225
  gene symbol: UBR4
  hgvsc: ENST00000375225.3:c.772C>A
  hgvsp: ENSP00000364373.3:p.Pro258Thr
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000444070
  ensembl transcript: ENST00000543981
  gene symbol: UBR4
  hgvsc: ENST00000543981.1:c.2539C>A
  hgvsp: ENSP00000444070.1:p.Pro847Thr
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364372
  ensembl transcript: ENST00000375224
  gene symbol: UBR4
  hgvsc: ENST00000375224.1:c.2668C>A
  hgvsp: ENSP00000364372.1:p.Pro890Thr
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000394173
  ensembl transcript: ENST00000429347
  gene symbol: UBR4
  hgvsc: ENST00000429347.2:c.2116C>A
  hgvsp: ENSP00000394173.2:p.Pro706Thr
  variant of: http://identifiers.org/hgnc/30313
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1165
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1644
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1269
  bin: 4.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31603
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1231
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3862
  bin: 3.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1690
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 764
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1465
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 807
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11438
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1091
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro5183Thr
num of homozygotes: 1
population: Other
population: African
population: East Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum

1-19401332-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19401332
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 19401332
    reference: chr 1
allele count: 1
allele frequency: 8.472135147499873e-6
allele num: 118034
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000127481
  ensembl transcript: ENST00000486515
  gene symbol: UBR4
  hgvsc: ENST00000486515.1:n.265C>G
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000272084
  ensembl transcript: ENST00000606379
  gene symbol: RP5-1126H10.2
  hgvsc: ENST00000606379.1:n.674C>G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000394173
  ensembl transcript: ENST00000429347
  gene symbol: UBR4
  hgvsc: ENST00000429347.2:c.2115C>G
  hgvsp: ENST00000429347.2:c.2115C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364403
  ensembl transcript: ENST00000375254
  gene symbol: UBR4
  hgvsc: ENST00000375254.3:c.15546C>G
  hgvsp: ENST00000375254.3:c.15546C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364416
  ensembl transcript: ENST00000375267
  gene symbol: UBR4
  hgvsc: ENST00000375267.2:c.15609C>G
  hgvsp: ENST00000375267.2:c.15609C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364372
  ensembl transcript: ENST00000375224
  gene symbol: UBR4
  hgvsc: ENST00000375224.1:c.2667C>G
  hgvsp: ENST00000375224.1:c.2667C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364374
  ensembl transcript: ENST00000375226
  gene symbol: UBR4
  hgvsc: ENST00000375226.2:c.15474C>G
  hgvsp: ENST00000375226.2:c.15474C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000444070
  ensembl transcript: ENST00000543981
  gene symbol: UBR4
  hgvsc: ENST00000543981.1:c.2538C>G
  hgvsp: ENST00000543981.1:c.2538C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364365
  ensembl transcript: ENST00000375217
  gene symbol: UBR4
  hgvsc: ENST00000375217.2:c.15525C>G
  hgvsp: ENST00000375217.2:c.15525C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000127481
  ensembl transcript: ENST00000459947
  gene symbol: UBR4
  hgvsc: ENST00000459947.1:n.3553C>G
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364373
  ensembl transcript: ENST00000375225
  gene symbol: UBR4
  hgvsc: ENST00000375225.3:c.771C>G
  hgvsp: ENST00000375225.3:c.771C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30313
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 807
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1166
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1230
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31653
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1651
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11509
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1415
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 765
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1091
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3867
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1636
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1269
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Val5182Val
num of homozygotes: 0
population: African
population: Other
population: Latino
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum

1-19401336-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19401336
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 19401336
    reference: chr 1
allele count: 1
allele frequency: 8.451799388089724e-6
allele num: 118318
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000272084
  ensembl transcript: ENST00000606379
  gene symbol: RP5-1126H10.2
  hgvsc: ENST00000606379.1:n.670C>G
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364365
  ensembl transcript: ENST00000375217
  gene symbol: UBR4
  hgvsc: ENST00000375217.2:c.15521C>G
  hgvsp: ENSP00000364365.2:p.Ser5174Ter
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364403
  ensembl transcript: ENST00000375254
  gene symbol: UBR4
  hgvsc: ENST00000375254.3:c.15542C>G
  hgvsp: ENSP00000364403.3:p.Ser5181Ter
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000394173
  ensembl transcript: ENST00000429347
  gene symbol: UBR4
  hgvsc: ENST00000429347.2:c.2111C>G
  hgvsp: ENSP00000394173.2:p.Ser704Ter
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000444070
  ensembl transcript: ENST00000543981
  gene symbol: UBR4
  hgvsc: ENST00000543981.1:c.2534C>G
  hgvsp: ENSP00000444070.1:p.Ser845Ter
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364372
  ensembl transcript: ENST00000375224
  gene symbol: UBR4
  hgvsc: ENST00000375224.1:c.2663C>G
  hgvsp: ENSP00000364372.1:p.Ser888Ter
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364374
  ensembl transcript: ENST00000375226
  gene symbol: UBR4
  hgvsc: ENST00000375226.2:c.15470C>G
  hgvsp: ENSP00000364374.2:p.Ser5157Ter
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364373
  ensembl transcript: ENST00000375225
  gene symbol: UBR4
  hgvsc: ENST00000375225.3:c.767C>G
  hgvsp: ENSP00000364373.3:p.Ser256Ter
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364416
  ensembl transcript: ENST00000375267
  gene symbol: UBR4
  hgvsc: ENST00000375267.2:c.15605C>G
  hgvsp: ENSP00000364416.2:p.Ser5202Ter
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000127481
  ensembl transcript: ENST00000486515
  gene symbol: UBR4
  hgvsc: ENST00000486515.1:n.261C>G
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000127481
  ensembl transcript: ENST00000459947
  gene symbol: UBR4
  hgvsc: ENST00000459947.1:n.3549C>G
  variant of: http://identifiers.org/hgnc/30313
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 31790
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 764
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3908
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1090
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1168
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 807
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1257
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1230
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11690
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1271
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1502
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1644
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser5181Ter
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Finnish)
population: African
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: QD
site quality: ReadPosRankSum

1-19401346-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19401346
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 19401346
    reference: chr 1
allele count: 3
allele frequency: 2.524190155658393e-5
allele num: 118850
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000127481
  ensembl transcript: ENST00000486515
  gene symbol: UBR4
  hgvsc: ENST00000486515.1:n.251C>G
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364365
  ensembl transcript: ENST00000375217
  gene symbol: UBR4
  hgvsc: ENST00000375217.2:c.15511C>G
  hgvsp: ENSP00000364365.2:p.Leu5171Val
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000394173
  ensembl transcript: ENST00000429347
  gene symbol: UBR4
  hgvsc: ENST00000429347.2:c.2101C>G
  hgvsp: ENSP00000394173.2:p.Leu701Val
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000444070
  ensembl transcript: ENST00000543981
  gene symbol: UBR4
  hgvsc: ENST00000543981.1:c.2524C>G
  hgvsp: ENSP00000444070.1:p.Leu842Val
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364373
  ensembl transcript: ENST00000375225
  gene symbol: UBR4
  hgvsc: ENST00000375225.3:c.757C>G
  hgvsp: ENSP00000364373.3:p.Leu253Val
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364374
  ensembl transcript: ENST00000375226
  gene symbol: UBR4
  hgvsc: ENST00000375226.2:c.15460C>G
  hgvsp: ENSP00000364374.2:p.Leu5154Val
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364372
  ensembl transcript: ENST00000375224
  gene symbol: UBR4
  hgvsc: ENST00000375224.1:c.2653C>G
  hgvsp: ENSP00000364372.1:p.Leu885Val
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364403
  ensembl transcript: ENST00000375254
  gene symbol: UBR4
  hgvsc: ENST00000375254.3:c.15532C>G
  hgvsp: ENSP00000364403.3:p.Leu5178Val
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364416
  ensembl transcript: ENST00000375267
  gene symbol: UBR4
  hgvsc: ENST00000375267.2:c.15595C>G
  hgvsp: ENSP00000364416.2:p.Leu5199Val
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000272084
  ensembl transcript: ENST00000606379
  gene symbol: RP5-1126H10.2
  hgvsc: ENST00000606379.1:n.660C>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000127481
  ensembl transcript: ENST00000459947
  gene symbol: UBR4
  hgvsc: ENST00000459947.1:n.3539C>G
  variant of: http://identifiers.org/hgnc/30313
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1648
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1090
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31888
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1166
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1272
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1245
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 807
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3958
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12088
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1230
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1056
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 764
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu5178Val
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: European (Finnish)
population: South Asian
reference allele: G
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: MQ

http://identifiers.org/exac.variant/1-19401360-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19401360
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 19401360
    reference: chr 1
allele count: 1
allele frequency: 8.388276544701125e-6
allele num: 119214
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000394173
  ensembl transcript: ENST00000429347
  gene symbol: UBR4
  hgvsc: ENST00000429347.2:c.2087G>T
  hgvsp: ENSP00000394173.2:p.Ser696Ile
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364365
  ensembl transcript: ENST00000375217
  gene symbol: UBR4
  hgvsc: ENST00000375217.2:c.15497G>T
  hgvsp: ENSP00000364365.2:p.Ser5166Ile
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364373
  ensembl transcript: ENST00000375225
  gene symbol: UBR4
  hgvsc: ENST00000375225.3:c.743G>T
  hgvsp: ENSP00000364373.3:p.Ser248Ile
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364372
  ensembl transcript: ENST00000375224
  gene symbol: UBR4
  hgvsc: ENST00000375224.1:c.2639G>T
  hgvsp: ENSP00000364372.1:p.Ser880Ile
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364374
  ensembl transcript: ENST00000375226
  gene symbol: UBR4
  hgvsc: ENST00000375226.2:c.15446G>T
  hgvsp: ENSP00000364374.2:p.Ser5149Ile
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000444070
  ensembl transcript: ENST00000543981
  gene symbol: UBR4
  hgvsc: ENST00000543981.1:c.2510G>T
  hgvsp: ENSP00000444070.1:p.Ser837Ile
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364416
  ensembl transcript: ENST00000375267
  gene symbol: UBR4
  hgvsc: ENST00000375267.2:c.15581G>T
  hgvsp: ENSP00000364416.2:p.Ser5194Ile
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364403
  ensembl transcript: ENST00000375254
  gene symbol: UBR4
  hgvsc: ENST00000375254.3:c.15518G>T
  hgvsp: ENSP00000364403.3:p.Ser5173Ile
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000272084
  ensembl transcript: ENST00000606379
  gene symbol: RP5-1126H10.2
  hgvsc: ENST00000606379.1:n.646G>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000127481
  ensembl transcript: ENST00000486515
  gene symbol: UBR4
  hgvsc: ENST00000486515.1:n.237G>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000127481
  ensembl transcript: ENST00000459947
  gene symbol: UBR4
  hgvsc: ENST00000459947.1:n.3525G>T
  variant of: http://identifiers.org/hgnc/30313
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1636
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12495
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1230
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31452
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3996
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1066
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1141
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 765
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1090
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1269
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1166
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 807
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser5173Ile
num of homozygotes: 0
population: African
population: South Asian
population: East Asian
population: Other
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: DP

1-19401367-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19401367
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 19401367
    reference: chr 1
allele count: 32
allele frequency: 2.684428636142476e-4
allele num: 119206
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000394173
  ensembl transcript: ENST00000429347
  gene symbol: UBR4
  hgvsc: ENST00000429347.2:c.2080C>G
  hgvsp: ENSP00000394173.2:p.Pro694Ala
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000444070
  ensembl transcript: ENST00000543981
  gene symbol: UBR4
  hgvsc: ENST00000543981.1:c.2503C>G
  hgvsp: ENSP00000444070.1:p.Pro835Ala
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000127481
  ensembl transcript: ENST00000459947
  gene symbol: UBR4
  hgvsc: ENST00000459947.1:n.3518C>G
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000127481
  ensembl transcript: ENST00000486515
  gene symbol: UBR4
  hgvsc: ENST00000486515.1:n.230C>G
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364373
  ensembl transcript: ENST00000375225
  gene symbol: UBR4
  hgvsc: ENST00000375225.3:c.736C>G
  hgvsp: ENSP00000364373.3:p.Pro246Ala
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364372
  ensembl transcript: ENST00000375224
  gene symbol: UBR4
  hgvsc: ENST00000375224.1:c.2632C>G
  hgvsp: ENSP00000364372.1:p.Pro878Ala
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364403
  ensembl transcript: ENST00000375254
  gene symbol: UBR4
  hgvsc: ENST00000375254.3:c.15511C>G
  hgvsp: ENSP00000364403.3:p.Pro5171Ala
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364365
  ensembl transcript: ENST00000375217
  gene symbol: UBR4
  hgvsc: ENST00000375217.2:c.15490C>G
  hgvsp: ENSP00000364365.2:p.Pro5164Ala
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364374
  ensembl transcript: ENST00000375226
  gene symbol: UBR4
  hgvsc: ENST00000375226.2:c.15439C>G
  hgvsp: ENSP00000364374.2:p.Pro5147Ala
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364416
  ensembl transcript: ENST00000375267
  gene symbol: UBR4
  hgvsc: ENST00000375267.2:c.15574C>G
  hgvsp: ENSP00000364416.2:p.Pro5192Ala
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000272084
  ensembl transcript: ENST00000606379
  gene symbol: RP5-1126H10.2
  hgvsc: ENST00000606379.1:n.639C>G
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1364
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 30900
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1167
  bin: 5.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1068
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1231
  bin: 4.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 807
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 590
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 756
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3998
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 12599
  bin: 2.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 764
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1638
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1093
  bin: 5.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1268
  bin: 4.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro5171Ala
num of homozygotes: 1
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Latino
population: African
population: South Asian
reference allele: G
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD

1-19401370-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19401370
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 19401370
    reference: chr 1
allele count: 2
allele frequency: 1.6787255115916e-5
allele num: 119138
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000127481
  ensembl transcript: ENST00000486515
  gene symbol: UBR4
  hgvsc: ENST00000486515.1:n.227G>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364416
  ensembl transcript: ENST00000375267
  gene symbol: UBR4
  hgvsc: ENST00000375267.2:c.15571G>A
  hgvsp: ENSP00000364416.2:p.Asp5191Asn
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000444070
  ensembl transcript: ENST00000543981
  gene symbol: UBR4
  hgvsc: ENST00000543981.1:c.2500G>A
  hgvsp: ENSP00000444070.1:p.Asp834Asn
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364374
  ensembl transcript: ENST00000375226
  gene symbol: UBR4
  hgvsc: ENST00000375226.2:c.15436G>A
  hgvsp: ENSP00000364374.2:p.Asp5146Asn
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000127481
  ensembl transcript: ENST00000459947
  gene symbol: UBR4
  hgvsc: ENST00000459947.1:n.3515G>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364365
  ensembl transcript: ENST00000375217
  gene symbol: UBR4
  hgvsc: ENST00000375217.2:c.15487G>A
  hgvsp: ENSP00000364365.2:p.Asp5163Asn
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364403
  ensembl transcript: ENST00000375254
  gene symbol: UBR4
  hgvsc: ENST00000375254.3:c.15508G>A
  hgvsp: ENSP00000364403.3:p.Asp5170Asn
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000272084
  ensembl transcript: ENST00000606379
  gene symbol: RP5-1126H10.2
  hgvsc: ENST00000606379.1:n.636G>A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364373
  ensembl transcript: ENST00000375225
  gene symbol: UBR4
  hgvsc: ENST00000375225.3:c.733G>A
  hgvsp: ENSP00000364373.3:p.Asp245Asn
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364372
  ensembl transcript: ENST00000375224
  gene symbol: UBR4
  hgvsc: ENST00000375224.1:c.2629G>A
  hgvsp: ENSP00000364372.1:p.Asp877Asn
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000394173
  ensembl transcript: ENST00000429347
  gene symbol: UBR4
  hgvsc: ENST00000429347.2:c.2077G>A
  hgvsp: ENSP00000394173.2:p.Asp693Asn
  variant of: http://identifiers.org/hgnc/30313
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 765
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1645
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 970
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30463
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4017
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1086
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12594
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1553
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1091
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 805
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1164
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1271
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1229
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asp5170Asn
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: East Asian
population: Latino
population: Other
population: South Asian
population: European (Finnish)
reference allele: C
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: FS
site quality: ClippingRankSum

1-19401371-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19401371
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 19401371
    reference: chr 1
allele count: 24
allele frequency: 2.015350251079052e-4
allele num: 119086
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364416
  ensembl transcript: ENST00000375267
  gene symbol: UBR4
  hgvsc: ENST00000375267.2:c.15570C>T
  hgvsp: ENST00000375267.2:c.15570C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364403
  ensembl transcript: ENST00000375254
  gene symbol: UBR4
  hgvsc: ENST00000375254.3:c.15507C>T
  hgvsp: ENST00000375254.3:c.15507C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000127481
  ensembl transcript: ENST00000486515
  gene symbol: UBR4
  hgvsc: ENST00000486515.1:n.226C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364365
  ensembl transcript: ENST00000375217
  gene symbol: UBR4
  hgvsc: ENST00000375217.2:c.15486C>T
  hgvsp: ENST00000375217.2:c.15486C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000394173
  ensembl transcript: ENST00000429347
  gene symbol: UBR4
  hgvsc: ENST00000429347.2:c.2076C>T
  hgvsp: ENST00000429347.2:c.2076C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364372
  ensembl transcript: ENST00000375224
  gene symbol: UBR4
  hgvsc: ENST00000375224.1:c.2628C>T
  hgvsp: ENST00000375224.1:c.2628C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000127481
  ensembl transcript: ENST00000459947
  gene symbol: UBR4
  hgvsc: ENST00000459947.1:n.3514C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364373
  ensembl transcript: ENST00000375225
  gene symbol: UBR4
  hgvsc: ENST00000375225.3:c.732C>T
  hgvsp: ENST00000375225.3:c.732C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364374
  ensembl transcript: ENST00000375226
  gene symbol: UBR4
  hgvsc: ENST00000375226.2:c.15435C>T
  hgvsp: ENST00000375226.2:c.15435C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000272084
  ensembl transcript: ENST00000606379
  gene symbol: RP5-1126H10.2
  hgvsc: ENST00000606379.1:n.635C>T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000444070
  ensembl transcript: ENST00000543981
  gene symbol: UBR4
  hgvsc: ENST00000543981.1:c.2499C>T
  hgvsp: ENST00000543981.1:c.2499C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30313
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1278
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1676
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 764
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30123
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 12600
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1165
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1653
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1135
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1099
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4026
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1230
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1089
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 812
  bin: 9.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
hgvs: p.Thr5169Thr
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Other
population: African
population: East Asian
population: Latino
population: European (Finnish)
reference allele: G
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: QD

1-19401371-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19401371
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 19401371
    reference: chr 1
allele count: 1
allele frequency: 8.397292712829384e-6
allele num: 119086
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364374
  ensembl transcript: ENST00000375226
  gene symbol: UBR4
  hgvsc: ENST00000375226.2:c.15435C>G
  hgvsp: ENST00000375226.2:c.15435C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000127481
  ensembl transcript: ENST00000459947
  gene symbol: UBR4
  hgvsc: ENST00000459947.1:n.3514C>G
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364373
  ensembl transcript: ENST00000375225
  gene symbol: UBR4
  hgvsc: ENST00000375225.3:c.732C>G
  hgvsp: ENST00000375225.3:c.732C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000272084
  ensembl transcript: ENST00000606379
  gene symbol: RP5-1126H10.2
  hgvsc: ENST00000606379.1:n.635C>G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364416
  ensembl transcript: ENST00000375267
  gene symbol: UBR4
  hgvsc: ENST00000375267.2:c.15570C>G
  hgvsp: ENST00000375267.2:c.15570C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364365
  ensembl transcript: ENST00000375217
  gene symbol: UBR4
  hgvsc: ENST00000375217.2:c.15486C>G
  hgvsp: ENST00000375217.2:c.15486C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000444070
  ensembl transcript: ENST00000543981
  gene symbol: UBR4
  hgvsc: ENST00000543981.1:c.2499C>G
  hgvsp: ENST00000543981.1:c.2499C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364403
  ensembl transcript: ENST00000375254
  gene symbol: UBR4
  hgvsc: ENST00000375254.3:c.15507C>G
  hgvsp: ENST00000375254.3:c.15507C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000127481
  ensembl transcript: ENST00000486515
  gene symbol: UBR4
  hgvsc: ENST00000486515.1:n.226C>G
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364372
  ensembl transcript: ENST00000375224
  gene symbol: UBR4
  hgvsc: ENST00000375224.1:c.2628C>G
  hgvsp: ENST00000375224.1:c.2628C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000394173
  ensembl transcript: ENST00000429347
  gene symbol: UBR4
  hgvsc: ENST00000429347.2:c.2076C>G
  hgvsp: ENST00000429347.2:c.2076C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30313
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1089
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1135
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 30123
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 764
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1676
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1165
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1099
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1230
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4026
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 812
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12600
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1653
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1278
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr5169Thr
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: East Asian
population: European (Finnish)
population: South Asian
population: African
population: Latino
reference allele: G
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff

1-19401382-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19401382
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 19401382
    reference: chr 1
allele count: 14
allele frequency: 1.177578897786152e-4
allele num: 118888
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364372
  ensembl transcript: ENST00000375224
  gene symbol: UBR4
  hgvsc: ENST00000375224.1:c.2617T>A
  hgvsp: ENSP00000364372.1:p.Ser873Thr
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000127481
  ensembl transcript: ENST00000459947
  gene symbol: UBR4
  hgvsc: ENST00000459947.1:n.3503T>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364373
  ensembl transcript: ENST00000375225
  gene symbol: UBR4
  hgvsc: ENST00000375225.3:c.721T>A
  hgvsp: ENSP00000364373.3:p.Ser241Thr
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000394173
  ensembl transcript: ENST00000429347
  gene symbol: UBR4
  hgvsc: ENST00000429347.2:c.2065T>A
  hgvsp: ENSP00000394173.2:p.Ser689Thr
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364374
  ensembl transcript: ENST00000375226
  gene symbol: UBR4
  hgvsc: ENST00000375226.2:c.15424T>A
  hgvsp: ENSP00000364374.2:p.Ser5142Thr
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000444070
  ensembl transcript: ENST00000543981
  gene symbol: UBR4
  hgvsc: ENST00000543981.1:c.2488T>A
  hgvsp: ENSP00000444070.1:p.Ser830Thr
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364365
  ensembl transcript: ENST00000375217
  gene symbol: UBR4
  hgvsc: ENST00000375217.2:c.15475T>A
  hgvsp: ENSP00000364365.2:p.Ser5159Thr
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000272084
  ensembl transcript: ENST00000606379
  gene symbol: RP5-1126H10.2
  hgvsc: ENST00000606379.1:n.624T>A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364403
  ensembl transcript: ENST00000375254
  gene symbol: UBR4
  hgvsc: ENST00000375254.3:c.15496T>A
  hgvsp: ENSP00000364403.3:p.Ser5166Thr
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000127481
  ensembl transcript: ENST00000486515
  gene symbol: UBR4
  hgvsc: ENST00000486515.1:n.215T>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364416
  ensembl transcript: ENST00000375267
  gene symbol: UBR4
  hgvsc: ENST00000375267.2:c.15559T>A
  hgvsp: ENSP00000364416.2:p.Ser5187Thr
  variant of: http://identifiers.org/hgnc/30313
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 809
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2267
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1639
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1228
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12329
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1216
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1089
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1269
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28444
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2468
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1165
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 767
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3956
  bin: 3.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
hgvs: p.Ser5166Thr
num of homozygotes: 0
population: Other
population: South Asian
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: A
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum

1-19401399-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19401399
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 19401399
    reference: chr 1
allele count: 1
allele frequency: 8.463387386167439e-6
allele num: 118156
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364365
  ensembl transcript: ENST00000375217
  gene symbol: UBR4
  hgvsc: ENST00000375217.2:c.15467-9G>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000444070
  ensembl transcript: ENST00000543981
  gene symbol: UBR4
  hgvsc: ENST00000543981.1:c.2480-9G>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl transcript: ENST00000459947
  gene symbol: UBR4
  hgvsc: ENST00000459947.1:n.3495-9G>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000394173
  ensembl transcript: ENST00000429347
  gene symbol: UBR4
  hgvsc: ENST00000429347.2:c.2057-9G>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000272084
  ensembl transcript: ENST00000606379
  gene symbol: RP5-1126H10.2
  hgvsc: ENST00000606379.1:n.607G>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl transcript: ENST00000486515
  gene symbol: UBR4
  hgvsc: ENST00000486515.1:n.207-9G>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364374
  ensembl transcript: ENST00000375226
  gene symbol: UBR4
  hgvsc: ENST00000375226.2:c.15416-9G>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364372
  ensembl transcript: ENST00000375224
  gene symbol: UBR4
  hgvsc: ENST00000375224.1:c.2609-9G>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364373
  ensembl transcript: ENST00000375225
  gene symbol: UBR4
  hgvsc: ENST00000375225.3:c.713-9G>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364416
  ensembl transcript: ENST00000375267
  gene symbol: UBR4
  hgvsc: ENST00000375267.2:c.15551-9G>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364403
  ensembl transcript: ENST00000375254
  gene symbol: UBR4
  hgvsc: ENST00000375254.3:c.15488-9G>A
  variant of: http://identifiers.org/hgnc/30313
canonical: true
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1513
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1165
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4038
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1232
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11777
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4490
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25220
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3614
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 590
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 807
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1644
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1273
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 765
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1089
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1971
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: Latino
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum

http://identifiers.org/exac.variant/1-19401399-CA-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19401399
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 19401398
    reference: chr 1
allele count: 1
allele frequency: 8.463387386167439e-6
allele num: 118156
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364365
  ensembl transcript: ENST00000375217
  gene symbol: UBR4
  hgvsc: ENST00000375217.2:c.15467-10delT
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364372
  ensembl transcript: ENST00000375224
  gene symbol: UBR4
  hgvsc: ENST00000375224.1:c.2609-10delT
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364416
  ensembl transcript: ENST00000375267
  gene symbol: UBR4
  hgvsc: ENST00000375267.2:c.15551-10delT
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000444070
  ensembl transcript: ENST00000543981
  gene symbol: UBR4
  hgvsc: ENST00000543981.1:c.2480-10delT
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364403
  ensembl transcript: ENST00000375254
  gene symbol: UBR4
  hgvsc: ENST00000375254.3:c.15488-10delT
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000394173
  ensembl transcript: ENST00000429347
  gene symbol: UBR4
  hgvsc: ENST00000429347.2:c.2057-10delT
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl transcript: ENST00000459947
  gene symbol: UBR4
  hgvsc: ENST00000459947.1:n.3495-10delT
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364374
  ensembl transcript: ENST00000375226
  gene symbol: UBR4
  hgvsc: ENST00000375226.2:c.15416-10delT
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl transcript: ENST00000486515
  gene symbol: UBR4
  hgvsc: ENST00000486515.1:n.207-10delT
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000272084
  ensembl transcript: ENST00000606379
  gene symbol: RP5-1126H10.2
  hgvsc: ENST00000606379.1:n.606delT
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364373
  ensembl transcript: ENST00000375225
  gene symbol: UBR4
  hgvsc: ENST00000375225.3:c.713-10delT
  variant of: http://identifiers.org/hgnc/30313
canonical: true
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11777
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1273
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3614
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 590
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4490
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 807
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4038
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1232
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1513
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1165
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 765
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1644
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25220
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1089
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 126
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 845
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Other
population: East Asian
population: African
population: Latino
reference allele: CA
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum

http://identifiers.org/exac.variant/1-19401400-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19401400
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 19401400
    reference: chr 1
allele count: 3
allele frequency: 2.538629478565505e-5
allele num: 118174
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000272084
  ensembl transcript: ENST00000606379
  gene symbol: RP5-1126H10.2
  hgvsc: ENST00000606379.1:n.606T>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl transcript: ENST00000459947
  gene symbol: UBR4
  hgvsc: ENST00000459947.1:n.3495-10T>G
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364365
  ensembl transcript: ENST00000375217
  gene symbol: UBR4
  hgvsc: ENST00000375217.2:c.15467-10T>G
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364416
  ensembl transcript: ENST00000375267
  gene symbol: UBR4
  hgvsc: ENST00000375267.2:c.15551-10T>G
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364372
  ensembl transcript: ENST00000375224
  gene symbol: UBR4
  hgvsc: ENST00000375224.1:c.2609-10T>G
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl transcript: ENST00000486515
  gene symbol: UBR4
  hgvsc: ENST00000486515.1:n.207-10T>G
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000444070
  ensembl transcript: ENST00000543981
  gene symbol: UBR4
  hgvsc: ENST00000543981.1:c.2480-10T>G
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364403
  ensembl transcript: ENST00000375254
  gene symbol: UBR4
  hgvsc: ENST00000375254.3:c.15488-10T>G
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000394173
  ensembl transcript: ENST00000429347
  gene symbol: UBR4
  hgvsc: ENST00000429347.2:c.2057-10T>G
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364373
  ensembl transcript: ENST00000375225
  gene symbol: UBR4
  hgvsc: ENST00000375225.3:c.713-10T>G
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364374
  ensembl transcript: ENST00000375226
  gene symbol: UBR4
  hgvsc: ENST00000375226.2:c.15416-10T>G
  variant of: http://identifiers.org/hgnc/30313
canonical: true
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 806
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4014
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1511
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1089
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1274
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1648
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11796
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3622
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1165
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4488
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25215
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 766
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1232
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8569
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 5034
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: Other
population: European (Finnish)
reference allele: A
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum

1-19401405-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19401405
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 19401405
    reference: chr 1
allele count: 47923
allele frequency: 4.092694758057629e-1
allele num: 117094
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000444070
  ensembl transcript: ENST00000543981
  gene symbol: UBR4
  hgvsc: ENST00000543981.1:c.2480-15C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000272084
  ensembl transcript: ENST00000606379
  gene symbol: RP5-1126H10.2
  hgvsc: ENST00000606379.1:n.601C>T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364403
  ensembl transcript: ENST00000375254
  gene symbol: UBR4
  hgvsc: ENST00000375254.3:c.15488-15C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl transcript: ENST00000459947
  gene symbol: UBR4
  hgvsc: ENST00000459947.1:n.3495-15C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364373
  ensembl transcript: ENST00000375225
  gene symbol: UBR4
  hgvsc: ENST00000375225.3:c.713-15C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364374
  ensembl transcript: ENST00000375226
  gene symbol: UBR4
  hgvsc: ENST00000375226.2:c.15416-15C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364372
  ensembl transcript: ENST00000375224
  gene symbol: UBR4
  hgvsc: ENST00000375224.1:c.2609-15C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364416
  ensembl transcript: ENST00000375267
  gene symbol: UBR4
  hgvsc: ENST00000375267.2:c.15551-15C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364365
  ensembl transcript: ENST00000375217
  gene symbol: UBR4
  hgvsc: ENST00000375217.2:c.15467-15C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000394173
  ensembl transcript: ENST00000429347
  gene symbol: UBR4
  hgvsc: ENST00000429347.2:c.2057-15C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl transcript: ENST00000486515
  gene symbol: UBR4
  hgvsc: ENST00000486515.1:n.207-15C>T
  variant of: http://identifiers.org/hgnc/30313
canonical: true
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2422
  bin: 9.75e1
  variant carriers: 2348
genotype depth: GenotypeDepth
  all individuals: 609
  bin: 6.75e1
  variant carriers: 380
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 9.25e1
  variant carriers: 391
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 2.5e0
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 4523
  bin: 1.25e1
  variant carriers: 1592
genotype depth: GenotypeDepth
  all individuals: 13565
  bin: 2.25e1
  variant carriers: 6163
genotype depth: GenotypeDepth
  all individuals: 6857
  bin: 3.25e1
  variant carriers: 5405
genotype depth: GenotypeDepth
  all individuals: 4509
  bin: 3.75e1
  variant carriers: 3852
genotype depth: GenotypeDepth
  all individuals: 1396
  bin: 7.5e0
  variant carriers: 281
genotype depth: GenotypeDepth
  all individuals: 5201
  bin: 1.75e1
  variant carriers: 4126
genotype depth: GenotypeDepth
  all individuals: 10801
  bin: 2.75e1
  variant carriers: 6555
genotype depth: GenotypeDepth
  all individuals: 1402
  bin: 5.25e1
  variant carriers: 866
genotype depth: GenotypeDepth
  all individuals: 473
  bin: 8.75e1
  variant carriers: 422
genotype depth: GenotypeDepth
  all individuals: 538
  bin: 7.25e1
  variant carriers: 374
genotype depth: GenotypeDepth
  all individuals: 3080
  bin: 4.25e1
  variant carriers: 2503
genotype depth: GenotypeDepth
  all individuals: 733
  bin: 6.25e1
  variant carriers: 405
genotype depth: GenotypeDepth
  all individuals: 2133
  bin: 4.75e1
  variant carriers: 1554
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 8.25e1
  variant carriers: 379
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 7.75e1
  variant carriers: 337
genotype depth: GenotypeDepth
  all individuals: 1073
  bin: 5.75e1
  variant carriers: 585
genotype quality: GenotypeQuality
  all individuals: 290
  bin: 2.5e0
  variant carriers: 65
genotype quality: GenotypeQuality
  all individuals: 916
  bin: 3.75e1
  variant carriers: 346
num of homozygotes: 10031
population: African
population: European (Finnish)
population: Other
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: DP

1-19401405-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19401405
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 19401405
    reference: chr 1
allele count: 4
allele frequency: 3.416058892855313e-5
allele num: 117094
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl transcript: ENST00000459947
  gene symbol: UBR4
  hgvsc: ENST00000459947.1:n.3495-15C>G
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364372
  ensembl transcript: ENST00000375224
  gene symbol: UBR4
  hgvsc: ENST00000375224.1:c.2609-15C>G
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000394173
  ensembl transcript: ENST00000429347
  gene symbol: UBR4
  hgvsc: ENST00000429347.2:c.2057-15C>G
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364365
  ensembl transcript: ENST00000375217
  gene symbol: UBR4
  hgvsc: ENST00000375217.2:c.15467-15C>G
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364373
  ensembl transcript: ENST00000375225
  gene symbol: UBR4
  hgvsc: ENST00000375225.3:c.713-15C>G
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl transcript: ENST00000486515
  gene symbol: UBR4
  hgvsc: ENST00000486515.1:n.207-15C>G
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364416
  ensembl transcript: ENST00000375267
  gene symbol: UBR4
  hgvsc: ENST00000375267.2:c.15551-15C>G
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000444070
  ensembl transcript: ENST00000543981
  gene symbol: UBR4
  hgvsc: ENST00000543981.1:c.2480-15C>G
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000272084
  ensembl transcript: ENST00000606379
  gene symbol: RP5-1126H10.2
  hgvsc: ENST00000606379.1:n.601C>G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364403
  ensembl transcript: ENST00000375254
  gene symbol: UBR4
  hgvsc: ENST00000375254.3:c.15488-15C>G
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364374
  ensembl transcript: ENST00000375226
  gene symbol: UBR4
  hgvsc: ENST00000375226.2:c.15416-15C>G
  variant of: http://identifiers.org/hgnc/30313
canonical: true
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10801
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4509
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3080
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2133
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1402
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1396
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4523
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 538
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13565
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1073
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6857
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5201
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 609
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 473
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2422
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 733
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 790
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 669
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: South Asian
population: East Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum

http://identifiers.org/exac.variant/1-19401408-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19401408
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 19401408
    reference: chr 1
allele count: 2
allele frequency: 1.760284461969054e-5
allele num: 113618
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000272084
  ensembl transcript: ENST00000606379
  gene symbol: RP5-1126H10.2
  hgvsc: ENST00000606379.1:n.598G>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl transcript: ENST00000459947
  gene symbol: UBR4
  hgvsc: ENST00000459947.1:n.3495-18G>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364373
  ensembl transcript: ENST00000375225
  gene symbol: UBR4
  hgvsc: ENST00000375225.3:c.713-18G>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364403
  ensembl transcript: ENST00000375254
  gene symbol: UBR4
  hgvsc: ENST00000375254.3:c.15488-18G>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364365
  ensembl transcript: ENST00000375217
  gene symbol: UBR4
  hgvsc: ENST00000375217.2:c.15467-18G>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364372
  ensembl transcript: ENST00000375224
  gene symbol: UBR4
  hgvsc: ENST00000375224.1:c.2609-18G>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000394173
  ensembl transcript: ENST00000429347
  gene symbol: UBR4
  hgvsc: ENST00000429347.2:c.2057-18G>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364374
  ensembl transcript: ENST00000375226
  gene symbol: UBR4
  hgvsc: ENST00000375226.2:c.15416-18G>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364416
  ensembl transcript: ENST00000375267
  gene symbol: UBR4
  hgvsc: ENST00000375267.2:c.15551-18G>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl transcript: ENST00000486515
  gene symbol: UBR4
  hgvsc: ENST00000486515.1:n.207-18G>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000444070
  ensembl transcript: ENST00000543981
  gene symbol: UBR4
  hgvsc: ENST00000543981.1:c.2480-18G>T
  variant of: http://identifiers.org/hgnc/30313
canonical: true
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4963
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1182
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15969
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13021
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10625
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1311
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3250
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1639
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3610
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1327
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 788
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1083
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 429
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 187
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: Other
population: South Asian
population: East Asian
population: African
population: European (Finnish)
reference allele: C
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: DP

http://identifiers.org/exac.variant/1-19401430-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19401430
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 19401430
    reference: chr 1
allele count: 1
allele frequency: 9.200986345736263e-6
allele num: 108684
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000444070
  ensembl transcript: ENST00000543981
  gene symbol: UBR4
  hgvsc: ENST00000543981.1:c.2480-40T>G
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364374
  ensembl transcript: ENST00000375226
  gene symbol: UBR4
  hgvsc: ENST00000375226.2:c.15416-40T>G
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364372
  ensembl transcript: ENST00000375224
  gene symbol: UBR4
  hgvsc: ENST00000375224.1:c.2609-40T>G
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364403
  ensembl transcript: ENST00000375254
  gene symbol: UBR4
  hgvsc: ENST00000375254.3:c.15488-40T>G
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364416
  ensembl transcript: ENST00000375267
  gene symbol: UBR4
  hgvsc: ENST00000375267.2:c.15551-40T>G
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000272084
  ensembl transcript: ENST00000606379
  gene symbol: RP5-1126H10.2
  hgvsc: ENST00000606379.1:n.576T>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364373
  ensembl transcript: ENST00000375225
  gene symbol: UBR4
  hgvsc: ENST00000375225.3:c.713-40T>G
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl transcript: ENST00000459947
  gene symbol: UBR4
  hgvsc: ENST00000459947.1:n.3495-40T>G
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000394173
  ensembl transcript: ENST00000429347
  gene symbol: UBR4
  hgvsc: ENST00000429347.2:c.2057-40T>G
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364365
  ensembl transcript: ENST00000375217
  gene symbol: UBR4
  hgvsc: ENST00000375217.2:c.15467-40T>G
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl transcript: ENST00000486515
  gene symbol: UBR4
  hgvsc: ENST00000486515.1:n.207-40T>G
  variant of: http://identifiers.org/hgnc/30313
canonical: true
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1461
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2595
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 550
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16203
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5474
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1080
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 790
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6454
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 525
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1182
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13763
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6775
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1276
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1322
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 996
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7636
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: Latino
population: South Asian
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: A
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: QD

1-19401435-GC-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19401435
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 19401434
    reference: chr 1
allele count: 1
allele frequency: 9.402914903620123e-6
allele num: 106350
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364403
  ensembl transcript: ENST00000375254
  gene symbol: UBR4
  hgvsc: ENST00000375254.3:c.15488-46delG
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl transcript: ENST00000459947
  gene symbol: UBR4
  hgvsc: ENST00000459947.1:n.3495-46delG
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl transcript: ENST00000486515
  gene symbol: UBR4
  hgvsc: ENST00000486515.1:n.207-46delG
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000394173
  ensembl transcript: ENST00000429347
  gene symbol: UBR4
  hgvsc: ENST00000429347.2:c.2057-46delG
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364365
  ensembl transcript: ENST00000375217
  gene symbol: UBR4
  hgvsc: ENST00000375217.2:c.15467-46delG
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000272084
  ensembl transcript: ENST00000606379
  gene symbol: RP5-1126H10.2
  hgvsc: ENST00000606379.1:n.570delG
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364372
  ensembl transcript: ENST00000375224
  gene symbol: UBR4
  hgvsc: ENST00000375224.1:c.2609-46delG
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000444070
  ensembl transcript: ENST00000543981
  gene symbol: UBR4
  hgvsc: ENST00000543981.1:c.2480-46delG
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364374
  ensembl transcript: ENST00000375226
  gene symbol: UBR4
  hgvsc: ENST00000375226.2:c.15416-46delG
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364373
  ensembl transcript: ENST00000375225
  gene symbol: UBR4
  hgvsc: ENST00000375225.3:c.713-46delG
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364416
  ensembl transcript: ENST00000375267
  gene symbol: UBR4
  hgvsc: ENST00000375267.2:c.15551-46delG
  variant of: http://identifiers.org/hgnc/30313
canonical: true
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15743
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2314
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4941
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14201
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1182
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 790
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1080
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6281
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7787
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1442
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1322
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1271
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7798
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1386
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Other
reference allele: GC
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: DP

1-19403185-T-TGG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19403185
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 19403187
    reference: chr 1
allele count: 1
allele frequency: 8.240626287597857e-6
allele num: 121350
alternate allele: TGG
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364416
  ensembl transcript: ENST00000375267
  gene symbol: UBR4
  hgvsc: ENST00000375267.2:c.15550+47_15550+48dupCC
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000444070
  ensembl transcript: ENST00000543981
  gene symbol: UBR4
  hgvsc: ENST00000543981.1:c.2479+47_2479+48dupCC
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364372
  ensembl transcript: ENST00000375224
  gene symbol: UBR4
  hgvsc: ENST00000375224.1:c.2608+47_2608+48dupCC
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364374
  ensembl transcript: ENST00000375226
  gene symbol: UBR4
  hgvsc: ENST00000375226.2:c.15415+47_15415+48dupCC
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364403
  ensembl transcript: ENST00000375254
  gene symbol: UBR4
  hgvsc: ENST00000375254.3:c.15487+47_15487+48dupCC
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364373
  ensembl transcript: ENST00000375225
  gene symbol: UBR4
  hgvsc: ENST00000375225.3:c.712+47_712+48dupCC
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000394173
  ensembl transcript: ENST00000429347
  gene symbol: UBR4
  hgvsc: ENST00000429347.2:c.2056+47_2056+48dupCC
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl transcript: ENST00000486515
  gene symbol: UBR4
  hgvsc: ENST00000486515.1:n.206+47_206+48dupCC
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl transcript: ENST00000459947
  gene symbol: UBR4
  hgvsc: ENST00000459947.1:n.3494+47_3494+48dupCC
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364365
  ensembl transcript: ENST00000375217
  gene symbol: UBR4
  hgvsc: ENST00000375217.2:c.15466+47_15466+48dupCC
  variant of: http://identifiers.org/hgnc/30313
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3046
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1048
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2622
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9923
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11362
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2419
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7531
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9310
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5504
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 571
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3718
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 716
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1531
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6435
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 145
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: ClippingRankSum

1-19403188-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19403188
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 19403188
    reference: chr 1
allele count: 16
allele frequency: 1.318478475838882e-4
allele num: 121352
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl transcript: ENST00000486515
  gene symbol: UBR4
  hgvsc: ENST00000486515.1:n.206+46C>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364365
  ensembl transcript: ENST00000375217
  gene symbol: UBR4
  hgvsc: ENST00000375217.2:c.15466+46C>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl transcript: ENST00000459947
  gene symbol: UBR4
  hgvsc: ENST00000459947.1:n.3494+46C>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364403
  ensembl transcript: ENST00000375254
  gene symbol: UBR4
  hgvsc: ENST00000375254.3:c.15487+46C>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364372
  ensembl transcript: ENST00000375224
  gene symbol: UBR4
  hgvsc: ENST00000375224.1:c.2608+46C>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364373
  ensembl transcript: ENST00000375225
  gene symbol: UBR4
  hgvsc: ENST00000375225.3:c.712+46C>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364416
  ensembl transcript: ENST00000375267
  gene symbol: UBR4
  hgvsc: ENST00000375267.2:c.15550+46C>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364374
  ensembl transcript: ENST00000375226
  gene symbol: UBR4
  hgvsc: ENST00000375226.2:c.15415+46C>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000394173
  ensembl transcript: ENST00000429347
  gene symbol: UBR4
  hgvsc: ENST00000429347.2:c.2056+46C>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000444070
  ensembl transcript: ENST00000543981
  gene symbol: UBR4
  hgvsc: ENST00000543981.1:c.2479+46C>A
  variant of: http://identifiers.org/hgnc/30313
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2419
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5505
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1048
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9943
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 716
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9308
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1531
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7528
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2664
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11361
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3046
  bin: 9.75e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 571
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3718
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4934
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: East Asian
population: South Asian
population: Other
population: European (Finnish)
reference allele: G
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: MQ

1-19403189-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19403189
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 19403189
    reference: chr 1
allele count: 1
allele frequency: 8.240490473993011e-6
allele num: 121352
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000394173
  ensembl transcript: ENST00000429347
  gene symbol: UBR4
  hgvsc: ENST00000429347.2:c.2056+45C>G
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364374
  ensembl transcript: ENST00000375226
  gene symbol: UBR4
  hgvsc: ENST00000375226.2:c.15415+45C>G
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364365
  ensembl transcript: ENST00000375217
  gene symbol: UBR4
  hgvsc: ENST00000375217.2:c.15466+45C>G
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364403
  ensembl transcript: ENST00000375254
  gene symbol: UBR4
  hgvsc: ENST00000375254.3:c.15487+45C>G
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364373
  ensembl transcript: ENST00000375225
  gene symbol: UBR4
  hgvsc: ENST00000375225.3:c.712+45C>G
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000444070
  ensembl transcript: ENST00000543981
  gene symbol: UBR4
  hgvsc: ENST00000543981.1:c.2479+45C>G
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364372
  ensembl transcript: ENST00000375224
  gene symbol: UBR4
  hgvsc: ENST00000375224.1:c.2608+45C>G
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364416
  ensembl transcript: ENST00000375267
  gene symbol: UBR4
  hgvsc: ENST00000375267.2:c.15550+45C>G
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl transcript: ENST00000459947
  gene symbol: UBR4
  hgvsc: ENST00000459947.1:n.3494+45C>G
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl transcript: ENST00000486515
  gene symbol: UBR4
  hgvsc: ENST00000486515.1:n.206+45C>G
  variant of: http://identifiers.org/hgnc/30313
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 716
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1533
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5508
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2688
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7530
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11366
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1048
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9948
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3718
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3030
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9309
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2419
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6431
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum

1-19403196-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19403196
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 19403196
    reference: chr 1
allele count: 1
allele frequency: 8.240218860212928e-6
allele num: 121356
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364373
  ensembl transcript: ENST00000375225
  gene symbol: UBR4
  hgvsc: ENST00000375225.3:c.712+38A>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000444070
  ensembl transcript: ENST00000543981
  gene symbol: UBR4
  hgvsc: ENST00000543981.1:c.2479+38A>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364416
  ensembl transcript: ENST00000375267
  gene symbol: UBR4
  hgvsc: ENST00000375267.2:c.15550+38A>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364403
  ensembl transcript: ENST00000375254
  gene symbol: UBR4
  hgvsc: ENST00000375254.3:c.15487+38A>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364365
  ensembl transcript: ENST00000375217
  gene symbol: UBR4
  hgvsc: ENST00000375217.2:c.15466+38A>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl transcript: ENST00000486515
  gene symbol: UBR4
  hgvsc: ENST00000486515.1:n.206+38A>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364374
  ensembl transcript: ENST00000375226
  gene symbol: UBR4
  hgvsc: ENST00000375226.2:c.15415+38A>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364372
  ensembl transcript: ENST00000375224
  gene symbol: UBR4
  hgvsc: ENST00000375224.1:c.2608+38A>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl transcript: ENST00000459947
  gene symbol: UBR4
  hgvsc: ENST00000459947.1:n.3494+38A>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000394173
  ensembl transcript: ENST00000429347
  gene symbol: UBR4
  hgvsc: ENST00000429347.2:c.2056+38A>T
  variant of: http://identifiers.org/hgnc/30313
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3719
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7528
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10004
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5507
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1048
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2816
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1533
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2419
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11375
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9300
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 716
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3029
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 6441
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4493
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
population: South Asian
population: East Asian
reference allele: T
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: DP
site quality: VQSLOD

1-19403198-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19403198
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 19403198
    reference: chr 1
allele count: 14
allele frequency: 1.1536876802637e-4
allele num: 121350
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364374
  ensembl transcript: ENST00000375226
  gene symbol: UBR4
  hgvsc: ENST00000375226.2:c.15415+36G>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364416
  ensembl transcript: ENST00000375267
  gene symbol: UBR4
  hgvsc: ENST00000375267.2:c.15550+36G>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl transcript: ENST00000459947
  gene symbol: UBR4
  hgvsc: ENST00000459947.1:n.3494+36G>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364372
  ensembl transcript: ENST00000375224
  gene symbol: UBR4
  hgvsc: ENST00000375224.1:c.2608+36G>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364373
  ensembl transcript: ENST00000375225
  gene symbol: UBR4
  hgvsc: ENST00000375225.3:c.712+36G>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000394173
  ensembl transcript: ENST00000429347
  gene symbol: UBR4
  hgvsc: ENST00000429347.2:c.2056+36G>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000444070
  ensembl transcript: ENST00000543981
  gene symbol: UBR4
  hgvsc: ENST00000543981.1:c.2479+36G>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364403
  ensembl transcript: ENST00000375254
  gene symbol: UBR4
  hgvsc: ENST00000375254.3:c.15487+36G>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl transcript: ENST00000486515
  gene symbol: UBR4
  hgvsc: ENST00000486515.1:n.206+36G>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364365
  ensembl transcript: ENST00000375217
  gene symbol: UBR4
  hgvsc: ENST00000375217.2:c.15466+36G>A
  variant of: http://identifiers.org/hgnc/30313
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2419
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3719
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1533
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3028
  bin: 9.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 11395
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10019
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7534
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2804
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 716
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5510
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1048
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9303
  bin: 3.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14759
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6428
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Other
population: Latino
reference allele: C
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: DP

1-19403199-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19403199
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 19403199
    reference: chr 1
allele count: 2
allele frequency: 1.648016612007449e-5
allele num: 121358
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl transcript: ENST00000459947
  gene symbol: UBR4
  hgvsc: ENST00000459947.1:n.3494+35C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364373
  ensembl transcript: ENST00000375225
  gene symbol: UBR4
  hgvsc: ENST00000375225.3:c.712+35C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl transcript: ENST00000486515
  gene symbol: UBR4
  hgvsc: ENST00000486515.1:n.206+35C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364365
  ensembl transcript: ENST00000375217
  gene symbol: UBR4
  hgvsc: ENST00000375217.2:c.15466+35C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364403
  ensembl transcript: ENST00000375254
  gene symbol: UBR4
  hgvsc: ENST00000375254.3:c.15487+35C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364374
  ensembl transcript: ENST00000375226
  gene symbol: UBR4
  hgvsc: ENST00000375226.2:c.15415+35C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000394173
  ensembl transcript: ENST00000429347
  gene symbol: UBR4
  hgvsc: ENST00000429347.2:c.2056+35C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000444070
  ensembl transcript: ENST00000543981
  gene symbol: UBR4
  hgvsc: ENST00000543981.1:c.2479+35C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364372
  ensembl transcript: ENST00000375224
  gene symbol: UBR4
  hgvsc: ENST00000375224.1:c.2608+35C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364416
  ensembl transcript: ENST00000375267
  gene symbol: UBR4
  hgvsc: ENST00000375267.2:c.15550+35C>T
  variant of: http://identifiers.org/hgnc/30313
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1048
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3719
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1534
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2823
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 716
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7529
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10058
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3020
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2419
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11396
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5508
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9299
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4494
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Latino
population: African
population: Other
population: South Asian
reference allele: G
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: DP

1-19403203-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19403203
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 19403203
    reference: chr 1
allele count: 5
allele frequency: 4.120041530018623e-5
allele num: 121358
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl transcript: ENST00000486515
  gene symbol: UBR4
  hgvsc: ENST00000486515.1:n.206+31C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364365
  ensembl transcript: ENST00000375217
  gene symbol: UBR4
  hgvsc: ENST00000375217.2:c.15466+31C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364403
  ensembl transcript: ENST00000375254
  gene symbol: UBR4
  hgvsc: ENST00000375254.3:c.15487+31C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364373
  ensembl transcript: ENST00000375225
  gene symbol: UBR4
  hgvsc: ENST00000375225.3:c.712+31C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000394173
  ensembl transcript: ENST00000429347
  gene symbol: UBR4
  hgvsc: ENST00000429347.2:c.2056+31C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364416
  ensembl transcript: ENST00000375267
  gene symbol: UBR4
  hgvsc: ENST00000375267.2:c.15550+31C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000444070
  ensembl transcript: ENST00000543981
  gene symbol: UBR4
  hgvsc: ENST00000543981.1:c.2479+31C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364372
  ensembl transcript: ENST00000375224
  gene symbol: UBR4
  hgvsc: ENST00000375224.1:c.2608+31C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364374
  ensembl transcript: ENST00000375226
  gene symbol: UBR4
  hgvsc: ENST00000375226.2:c.15415+31C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl transcript: ENST00000459947
  gene symbol: UBR4
  hgvsc: ENST00000459947.1:n.3494+31C>T
  variant of: http://identifiers.org/hgnc/30313
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11407
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10075
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9301
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 716
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3018
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5508
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3719
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2419
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1048
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2850
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1534
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7530
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: East Asian
population: African
reference allele: G
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: InbreedingCoeff

1-19403216-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19403216
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 19403216
    reference: chr 1
allele count: 1
allele frequency: 8.239132584121543e-6
allele num: 121372
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl transcript: ENST00000486515
  gene symbol: UBR4
  hgvsc: ENST00000486515.1:n.206+18C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000444070
  ensembl transcript: ENST00000543981
  gene symbol: UBR4
  hgvsc: ENST00000543981.1:c.2479+18C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000394173
  ensembl transcript: ENST00000429347
  gene symbol: UBR4
  hgvsc: ENST00000429347.2:c.2056+18C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364365
  ensembl transcript: ENST00000375217
  gene symbol: UBR4
  hgvsc: ENST00000375217.2:c.15466+18C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364374
  ensembl transcript: ENST00000375226
  gene symbol: UBR4
  hgvsc: ENST00000375226.2:c.15415+18C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364416
  ensembl transcript: ENST00000375267
  gene symbol: UBR4
  hgvsc: ENST00000375267.2:c.15550+18C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl transcript: ENST00000459947
  gene symbol: UBR4
  hgvsc: ENST00000459947.1:n.3494+18C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364373
  ensembl transcript: ENST00000375225
  gene symbol: UBR4
  hgvsc: ENST00000375225.3:c.712+18C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364403
  ensembl transcript: ENST00000375254
  gene symbol: UBR4
  hgvsc: ENST00000375254.3:c.15487+18C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364372
  ensembl transcript: ENST00000375224
  gene symbol: UBR4
  hgvsc: ENST00000375224.1:c.2608+18C>T
  variant of: http://identifiers.org/hgnc/30313
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3014
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2421
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7531
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10109
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2878
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11413
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 716
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1048
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9300
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3718
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1534
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5508
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6471
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: African
population: Latino
population: South Asian
population: European (Finnish)
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD

1-19403221-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19403221
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 19403221
    reference: chr 1
allele count: 2705
allele frequency: 2.228501754790661e-2
allele num: 121382
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364365
  ensembl transcript: ENST00000375217
  gene symbol: UBR4
  hgvsc: ENST00000375217.2:c.15466+13G>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000394173
  ensembl transcript: ENST00000429347
  gene symbol: UBR4
  hgvsc: ENST00000429347.2:c.2056+13G>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364416
  ensembl transcript: ENST00000375267
  gene symbol: UBR4
  hgvsc: ENST00000375267.2:c.15550+13G>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364373
  ensembl transcript: ENST00000375225
  gene symbol: UBR4
  hgvsc: ENST00000375225.3:c.712+13G>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl transcript: ENST00000459947
  gene symbol: UBR4
  hgvsc: ENST00000459947.1:n.3494+13G>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364372
  ensembl transcript: ENST00000375224
  gene symbol: UBR4
  hgvsc: ENST00000375224.1:c.2608+13G>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364374
  ensembl transcript: ENST00000375226
  gene symbol: UBR4
  hgvsc: ENST00000375226.2:c.15415+13G>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000444070
  ensembl transcript: ENST00000543981
  gene symbol: UBR4
  hgvsc: ENST00000543981.1:c.2479+13G>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl transcript: ENST00000486515
  gene symbol: UBR4
  hgvsc: ENST00000486515.1:n.206+13G>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364403
  ensembl transcript: ENST00000375254
  gene symbol: UBR4
  hgvsc: ENST00000375254.3:c.15487+13G>A
  variant of: http://identifiers.org/hgnc/30313
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 9.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 596
  bin: 7.75e1
  variant carriers: 31
genotype depth: GenotypeDepth
  all individuals: 7504
  bin: 4.25e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 3741
  bin: 5.25e1
  variant carriers: 49
genotype depth: GenotypeDepth
  all individuals: 1567
  bin: 6.25e1
  variant carriers: 42
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11340
  bin: 3.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 10056
  bin: 2.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 8.25e1
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 741
  bin: 7.25e1
  variant carriers: 27
genotype depth: GenotypeDepth
  all individuals: 1060
  bin: 6.75e1
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 2456
  bin: 5.75e1
  variant carriers: 49
genotype depth: GenotypeDepth
  all individuals: 5522
  bin: 4.75e1
  variant carriers: 38
genotype depth: GenotypeDepth
  all individuals: 2815
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 9272
  bin: 3.75e1
  variant carriers: 27
genotype depth: GenotypeDepth
  all individuals: 3066
  bin: 9.75e1
  variant carriers: 2256
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 8.75e1
  variant carriers: 16
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6442
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 56
population: Other
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Latino
population: East Asian
population: South Asian
reference allele: C
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/1-19403222-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19403222
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 19403222
    reference: chr 1
allele count: 1
allele frequency: 8.238318064983852e-6
allele num: 121384
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364416
  ensembl transcript: ENST00000375267
  gene symbol: UBR4
  hgvsc: ENST00000375267.2:c.15550+12G>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364372
  ensembl transcript: ENST00000375224
  gene symbol: UBR4
  hgvsc: ENST00000375224.1:c.2608+12G>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000394173
  ensembl transcript: ENST00000429347
  gene symbol: UBR4
  hgvsc: ENST00000429347.2:c.2056+12G>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl transcript: ENST00000459947
  gene symbol: UBR4
  hgvsc: ENST00000459947.1:n.3494+12G>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364403
  ensembl transcript: ENST00000375254
  gene symbol: UBR4
  hgvsc: ENST00000375254.3:c.15487+12G>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364365
  ensembl transcript: ENST00000375217
  gene symbol: UBR4
  hgvsc: ENST00000375217.2:c.15466+12G>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl transcript: ENST00000486515
  gene symbol: UBR4
  hgvsc: ENST00000486515.1:n.206+12G>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364373
  ensembl transcript: ENST00000375225
  gene symbol: UBR4
  hgvsc: ENST00000375225.3:c.712+12G>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364374
  ensembl transcript: ENST00000375226
  gene symbol: UBR4
  hgvsc: ENST00000375226.2:c.15415+12G>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000444070
  ensembl transcript: ENST00000543981
  gene symbol: UBR4
  hgvsc: ENST00000543981.1:c.2479+12G>T
  variant of: http://identifiers.org/hgnc/30313
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1080
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2513
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7813
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 736
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 859
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9677
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1585
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5736
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11862
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10515
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3868
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2909
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2209
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: South Asian
population: European (Finnish)
population: Latino
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD

1-19403229-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19403229
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 19403229
    reference: chr 1
allele count: 1
allele frequency: 8.238182327451271e-6
allele num: 121386
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364373
  ensembl transcript: ENST00000375225
  gene symbol: UBR4
  hgvsc: ENST00000375225.3:c.712+5G>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl transcript: ENST00000486515
  gene symbol: UBR4
  hgvsc: ENST00000486515.1:n.206+5G>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364365
  ensembl transcript: ENST00000375217
  gene symbol: UBR4
  hgvsc: ENST00000375217.2:c.15466+5G>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364403
  ensembl transcript: ENST00000375254
  gene symbol: UBR4
  hgvsc: ENST00000375254.3:c.15487+5G>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000444070
  ensembl transcript: ENST00000543981
  gene symbol: UBR4
  hgvsc: ENST00000543981.1:c.2479+5G>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364374
  ensembl transcript: ENST00000375226
  gene symbol: UBR4
  hgvsc: ENST00000375226.2:c.15415+5G>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364416
  ensembl transcript: ENST00000375267
  gene symbol: UBR4
  hgvsc: ENST00000375267.2:c.15550+5G>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000394173
  ensembl transcript: ENST00000429347
  gene symbol: UBR4
  hgvsc: ENST00000429347.2:c.2056+5G>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364372
  ensembl transcript: ENST00000375224
  gene symbol: UBR4
  hgvsc: ENST00000375224.1:c.2608+5G>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl transcript: ENST00000459947
  gene symbol: UBR4
  hgvsc: ENST00000459947.1:n.3494+5G>A
  variant of: http://identifiers.org/hgnc/30313
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10520
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1585
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9676
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11861
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2917
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 859
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7813
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 736
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3868
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5736
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2512
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1081
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2209
  bin: 8.75e1
  variant carriers: 0
hgvs: c.15487+5G>A
num of homozygotes: 0
population: Latino
population: African
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Other
population: European (Finnish)
reference allele: C
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: QD

1-19403230-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19403230
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 19403230
    reference: chr 1
allele count: 1
allele frequency: 8.238182327451271e-6
allele num: 121386
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364374
  ensembl transcript: ENST00000375226
  gene symbol: UBR4
  hgvsc: ENST00000375226.2:c.15415+4A>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364365
  ensembl transcript: ENST00000375217
  gene symbol: UBR4
  hgvsc: ENST00000375217.2:c.15466+4A>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364416
  ensembl transcript: ENST00000375267
  gene symbol: UBR4
  hgvsc: ENST00000375267.2:c.15550+4A>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364403
  ensembl transcript: ENST00000375254
  gene symbol: UBR4
  hgvsc: ENST00000375254.3:c.15487+4A>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364373
  ensembl transcript: ENST00000375225
  gene symbol: UBR4
  hgvsc: ENST00000375225.3:c.712+4A>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000444070
  ensembl transcript: ENST00000543981
  gene symbol: UBR4
  hgvsc: ENST00000543981.1:c.2479+4A>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000394173
  ensembl transcript: ENST00000429347
  gene symbol: UBR4
  hgvsc: ENST00000429347.2:c.2056+4A>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl transcript: ENST00000459947
  gene symbol: UBR4
  hgvsc: ENST00000459947.1:n.3494+4A>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364372
  ensembl transcript: ENST00000375224
  gene symbol: UBR4
  hgvsc: ENST00000375224.1:c.2608+4A>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl transcript: ENST00000486515
  gene symbol: UBR4
  hgvsc: ENST00000486515.1:n.206+4A>T
  variant of: http://identifiers.org/hgnc/30313
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 859
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5736
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3868
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1585
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10521
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2915
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9676
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11862
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1080
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 736
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2512
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7813
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
hgvs: c.15487+4A>T
num of homozygotes: 0
population: South Asian
population: African
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: East Asian
population: Latino
reference allele: T
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD

1-19403234-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19403234
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 19403234
    reference: chr 1
allele count: 9
allele frequency: 7.414119779223988e-5
allele num: 121390
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000394173
  ensembl transcript: ENST00000429347
  gene symbol: UBR4
  hgvsc: ENST00000429347.2:c.2056G>A
  hgvsp: ENSP00000394173.2:p.Gly686Ser
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364373
  ensembl transcript: ENST00000375225
  gene symbol: UBR4
  hgvsc: ENST00000375225.3:c.712G>A
  hgvsp: ENSP00000364373.3:p.Gly238Ser
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000127481
  ensembl transcript: ENST00000459947
  gene symbol: UBR4
  hgvsc: ENST00000459947.1:n.3494G>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364374
  ensembl transcript: ENST00000375226
  gene symbol: UBR4
  hgvsc: ENST00000375226.2:c.15415G>A
  hgvsp: ENSP00000364374.2:p.Gly5139Ser
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000444070
  ensembl transcript: ENST00000543981
  gene symbol: UBR4
  hgvsc: ENST00000543981.1:c.2479G>A
  hgvsp: ENSP00000444070.1:p.Gly827Ser
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364372
  ensembl transcript: ENST00000375224
  gene symbol: UBR4
  hgvsc: ENST00000375224.1:c.2608G>A
  hgvsp: ENSP00000364372.1:p.Gly870Ser
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364403
  ensembl transcript: ENST00000375254
  gene symbol: UBR4
  hgvsc: ENST00000375254.3:c.15487G>A
  hgvsp: ENSP00000364403.3:p.Gly5163Ser
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364365
  ensembl transcript: ENST00000375217
  gene symbol: UBR4
  hgvsc: ENST00000375217.2:c.15466G>A
  hgvsp: ENSP00000364365.2:p.Gly5156Ser
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000127481
  ensembl transcript: ENST00000486515
  gene symbol: UBR4
  hgvsc: ENST00000486515.1:n.206G>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364416
  ensembl transcript: ENST00000375267
  gene symbol: UBR4
  hgvsc: ENST00000375267.2:c.15550G>A
  hgvsp: ENSP00000364416.2:p.Gly5184Ser
  variant of: http://identifiers.org/hgnc/30313
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2917
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 860
  bin: 9.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 1079
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5736
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11863
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10525
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3867
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1585
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9676
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7813
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2512
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly5163Ser
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Finnish)
population: African
population: Other
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: ClippingRankSum

1-19403235-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19403235
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 19403235
    reference: chr 1
allele count: 2
allele frequency: 1.647555028337947e-5
allele num: 121392
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364374
  ensembl transcript: ENST00000375226
  gene symbol: UBR4
  hgvsc: ENST00000375226.2:c.15414C>T
  hgvsp: ENST00000375226.2:c.15414C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364373
  ensembl transcript: ENST00000375225
  gene symbol: UBR4
  hgvsc: ENST00000375225.3:c.711C>T
  hgvsp: ENST00000375225.3:c.711C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000394173
  ensembl transcript: ENST00000429347
  gene symbol: UBR4
  hgvsc: ENST00000429347.2:c.2055C>T
  hgvsp: ENST00000429347.2:c.2055C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000444070
  ensembl transcript: ENST00000543981
  gene symbol: UBR4
  hgvsc: ENST00000543981.1:c.2478C>T
  hgvsp: ENST00000543981.1:c.2478C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000127481
  ensembl transcript: ENST00000459947
  gene symbol: UBR4
  hgvsc: ENST00000459947.1:n.3493C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364365
  ensembl transcript: ENST00000375217
  gene symbol: UBR4
  hgvsc: ENST00000375217.2:c.15465C>T
  hgvsp: ENST00000375217.2:c.15465C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364416
  ensembl transcript: ENST00000375267
  gene symbol: UBR4
  hgvsc: ENST00000375267.2:c.15549C>T
  hgvsp: ENST00000375267.2:c.15549C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364372
  ensembl transcript: ENST00000375224
  gene symbol: UBR4
  hgvsc: ENST00000375224.1:c.2607C>T
  hgvsp: ENST00000375224.1:c.2607C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000127481
  ensembl transcript: ENST00000486515
  gene symbol: UBR4
  hgvsc: ENST00000486515.1:n.205C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364403
  ensembl transcript: ENST00000375254
  gene symbol: UBR4
  hgvsc: ENST00000375254.3:c.15486C>T
  hgvsp: ENST00000375254.3:c.15486C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30313
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9679
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10525
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5737
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1079
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 853
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1585
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7813
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11864
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3867
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2919
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 736
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.15486C>T
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: Other
population: East Asian
population: South Asian
population: African
population: European (Finnish)
reference allele: G
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: DP
site quality: InbreedingCoeff

1-19403243-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19403243
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 19403243
    reference: chr 1
allele count: 1
allele frequency: 8.237639422047218e-6
allele num: 121394
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364416
  ensembl transcript: ENST00000375267
  gene symbol: UBR4
  hgvsc: ENST00000375267.2:c.15541G>A
  hgvsp: ENSP00000364416.2:p.Asp5181Asn
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364374
  ensembl transcript: ENST00000375226
  gene symbol: UBR4
  hgvsc: ENST00000375226.2:c.15406G>A
  hgvsp: ENSP00000364374.2:p.Asp5136Asn
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364403
  ensembl transcript: ENST00000375254
  gene symbol: UBR4
  hgvsc: ENST00000375254.3:c.15478G>A
  hgvsp: ENSP00000364403.3:p.Asp5160Asn
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000394173
  ensembl transcript: ENST00000429347
  gene symbol: UBR4
  hgvsc: ENST00000429347.2:c.2047G>A
  hgvsp: ENSP00000394173.2:p.Asp683Asn
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364365
  ensembl transcript: ENST00000375217
  gene symbol: UBR4
  hgvsc: ENST00000375217.2:c.15457G>A
  hgvsp: ENSP00000364365.2:p.Asp5153Asn
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364372
  ensembl transcript: ENST00000375224
  gene symbol: UBR4
  hgvsc: ENST00000375224.1:c.2599G>A
  hgvsp: ENSP00000364372.1:p.Asp867Asn
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000127481
  ensembl transcript: ENST00000486515
  gene symbol: UBR4
  hgvsc: ENST00000486515.1:n.197G>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364373
  ensembl transcript: ENST00000375225
  gene symbol: UBR4
  hgvsc: ENST00000375225.3:c.703G>A
  hgvsp: ENSP00000364373.3:p.Asp235Asn
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000444070
  ensembl transcript: ENST00000543981
  gene symbol: UBR4
  hgvsc: ENST00000543981.1:c.2470G>A
  hgvsp: ENSP00000444070.1:p.Asp824Asn
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000127481
  ensembl transcript: ENST00000459947
  gene symbol: UBR4
  hgvsc: ENST00000459947.1:n.3485G>A
  variant of: http://identifiers.org/hgnc/30313
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1585
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2920
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1079
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 736
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10527
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2513
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9680
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3867
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11863
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7813
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 851
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5737
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6765
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3890
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Asp5160Asn
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: South Asian
population: Other
population: African
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum

1-19403244-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19403244
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 19403244
    reference: chr 1
allele count: 4
allele frequency: 3.295001482750667e-5
allele num: 121396
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364416
  ensembl transcript: ENST00000375267
  gene symbol: UBR4
  hgvsc: ENST00000375267.2:c.15540C>T
  hgvsp: ENST00000375267.2:c.15540C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000394173
  ensembl transcript: ENST00000429347
  gene symbol: UBR4
  hgvsc: ENST00000429347.2:c.2046C>T
  hgvsp: ENST00000429347.2:c.2046C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000444070
  ensembl transcript: ENST00000543981
  gene symbol: UBR4
  hgvsc: ENST00000543981.1:c.2469C>T
  hgvsp: ENST00000543981.1:c.2469C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000127481
  ensembl transcript: ENST00000486515
  gene symbol: UBR4
  hgvsc: ENST00000486515.1:n.196C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364374
  ensembl transcript: ENST00000375226
  gene symbol: UBR4
  hgvsc: ENST00000375226.2:c.15405C>T
  hgvsp: ENST00000375226.2:c.15405C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364372
  ensembl transcript: ENST00000375224
  gene symbol: UBR4
  hgvsc: ENST00000375224.1:c.2598C>T
  hgvsp: ENST00000375224.1:c.2598C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364403
  ensembl transcript: ENST00000375254
  gene symbol: UBR4
  hgvsc: ENST00000375254.3:c.15477C>T
  hgvsp: ENST00000375254.3:c.15477C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364365
  ensembl transcript: ENST00000375217
  gene symbol: UBR4
  hgvsc: ENST00000375217.2:c.15456C>T
  hgvsp: ENST00000375217.2:c.15456C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364373
  ensembl transcript: ENST00000375225
  gene symbol: UBR4
  hgvsc: ENST00000375225.3:c.702C>T
  hgvsp: ENST00000375225.3:c.702C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000127481
  ensembl transcript: ENST00000459947
  gene symbol: UBR4
  hgvsc: ENST00000459947.1:n.3484C>T
  variant of: http://identifiers.org/hgnc/30313
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1585
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 850
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1079
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3867
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2513
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 736
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7814
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2918
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9680
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10529
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11864
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5737
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Leu5159Leu
num of homozygotes: 0
population: Other
population: East Asian
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ

1-19403260-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19403260
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 19403260
    reference: chr 1
allele count: 1
allele frequency: 8.237503706876667e-6
allele num: 121396
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000444070
  ensembl transcript: ENST00000543981
  gene symbol: UBR4
  hgvsc: ENST00000543981.1:c.2453C>A
  hgvsp: ENSP00000444070.1:p.Thr818Asn
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364374
  ensembl transcript: ENST00000375226
  gene symbol: UBR4
  hgvsc: ENST00000375226.2:c.15389C>A
  hgvsp: ENSP00000364374.2:p.Thr5130Asn
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364365
  ensembl transcript: ENST00000375217
  gene symbol: UBR4
  hgvsc: ENST00000375217.2:c.15440C>A
  hgvsp: ENSP00000364365.2:p.Thr5147Asn
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364372
  ensembl transcript: ENST00000375224
  gene symbol: UBR4
  hgvsc: ENST00000375224.1:c.2582C>A
  hgvsp: ENSP00000364372.1:p.Thr861Asn
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000127481
  ensembl transcript: ENST00000459947
  gene symbol: UBR4
  hgvsc: ENST00000459947.1:n.3468C>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364403
  ensembl transcript: ENST00000375254
  gene symbol: UBR4
  hgvsc: ENST00000375254.3:c.15461C>A
  hgvsp: ENSP00000364403.3:p.Thr5154Asn
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364373
  ensembl transcript: ENST00000375225
  gene symbol: UBR4
  hgvsc: ENST00000375225.3:c.686C>A
  hgvsp: ENSP00000364373.3:p.Thr229Asn
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000127481
  ensembl transcript: ENST00000486515
  gene symbol: UBR4
  hgvsc: ENST00000486515.1:n.180C>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364416
  ensembl transcript: ENST00000375267
  gene symbol: UBR4
  hgvsc: ENST00000375267.2:c.15524C>A
  hgvsp: ENSP00000364416.2:p.Thr5175Asn
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000394173
  ensembl transcript: ENST00000429347
  gene symbol: UBR4
  hgvsc: ENST00000429347.2:c.2030C>A
  hgvsp: ENSP00000394173.2:p.Thr677Asn
  variant of: http://identifiers.org/hgnc/30313
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2915
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7814
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 846
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5738
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2513
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9682
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10528
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1585
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 736
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11865
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3867
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1079
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5088
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Thr5154Asn
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
population: African
reference allele: G
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum

http://identifiers.org/exac.variant/1-19403262-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19403262
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 19403262
    reference: chr 1
allele count: 2
allele frequency: 1.647473599235572e-5
allele num: 121398
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364374
  ensembl transcript: ENST00000375226
  gene symbol: UBR4
  hgvsc: ENST00000375226.2:c.15387G>T
  hgvsp: ENSP00000364374.2:p.Glu5129Asp
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000127481
  ensembl transcript: ENST00000459947
  gene symbol: UBR4
  hgvsc: ENST00000459947.1:n.3466G>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000127481
  ensembl transcript: ENST00000486515
  gene symbol: UBR4
  hgvsc: ENST00000486515.1:n.178G>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000394173
  ensembl transcript: ENST00000429347
  gene symbol: UBR4
  hgvsc: ENST00000429347.2:c.2028G>T
  hgvsp: ENSP00000394173.2:p.Glu676Asp
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364403
  ensembl transcript: ENST00000375254
  gene symbol: UBR4
  hgvsc: ENST00000375254.3:c.15459G>T
  hgvsp: ENSP00000364403.3:p.Glu5153Asp
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000444070
  ensembl transcript: ENST00000543981
  gene symbol: UBR4
  hgvsc: ENST00000543981.1:c.2451G>T
  hgvsp: ENSP00000444070.1:p.Glu817Asp
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364373
  ensembl transcript: ENST00000375225
  gene symbol: UBR4
  hgvsc: ENST00000375225.3:c.684G>T
  hgvsp: ENSP00000364373.3:p.Glu228Asp
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364416
  ensembl transcript: ENST00000375267
  gene symbol: UBR4
  hgvsc: ENST00000375267.2:c.15522G>T
  hgvsp: ENSP00000364416.2:p.Glu5174Asp
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364365
  ensembl transcript: ENST00000375217
  gene symbol: UBR4
  hgvsc: ENST00000375217.2:c.15438G>T
  hgvsp: ENSP00000364365.2:p.Glu5146Asp
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364372
  ensembl transcript: ENST00000375224
  gene symbol: UBR4
  hgvsc: ENST00000375224.1:c.2580G>T
  hgvsp: ENSP00000364372.1:p.Glu860Asp
  variant of: http://identifiers.org/hgnc/30313
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 736
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10528
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9682
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7815
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11865
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5738
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1079
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2513
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3867
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 845
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2915
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1585
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Glu5153Asp
num of homozygotes: 0
population: East Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Latino
population: African
reference allele: C
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum

1-19403266-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19403266
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 19403266
    reference: chr 1
allele count: 1
allele frequency: 8.237639422047218e-6
allele num: 121394
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000444070
  ensembl transcript: ENST00000543981
  gene symbol: UBR4
  hgvsc: ENST00000543981.1:c.2447T>C
  hgvsp: ENSP00000444070.1:p.Val816Ala
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364416
  ensembl transcript: ENST00000375267
  gene symbol: UBR4
  hgvsc: ENST00000375267.2:c.15518T>C
  hgvsp: ENSP00000364416.2:p.Val5173Ala
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364403
  ensembl transcript: ENST00000375254
  gene symbol: UBR4
  hgvsc: ENST00000375254.3:c.15455T>C
  hgvsp: ENSP00000364403.3:p.Val5152Ala
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364365
  ensembl transcript: ENST00000375217
  gene symbol: UBR4
  hgvsc: ENST00000375217.2:c.15434T>C
  hgvsp: ENSP00000364365.2:p.Val5145Ala
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364372
  ensembl transcript: ENST00000375224
  gene symbol: UBR4
  hgvsc: ENST00000375224.1:c.2576T>C
  hgvsp: ENSP00000364372.1:p.Val859Ala
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364374
  ensembl transcript: ENST00000375226
  gene symbol: UBR4
  hgvsc: ENST00000375226.2:c.15383T>C
  hgvsp: ENSP00000364374.2:p.Val5128Ala
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000127481
  ensembl transcript: ENST00000459947
  gene symbol: UBR4
  hgvsc: ENST00000459947.1:n.3462T>C
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364373
  ensembl transcript: ENST00000375225
  gene symbol: UBR4
  hgvsc: ENST00000375225.3:c.680T>C
  hgvsp: ENSP00000364373.3:p.Val227Ala
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000127481
  ensembl transcript: ENST00000486515
  gene symbol: UBR4
  hgvsc: ENST00000486515.1:n.174T>C
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000394173
  ensembl transcript: ENST00000429347
  gene symbol: UBR4
  hgvsc: ENST00000429347.2:c.2024T>C
  hgvsp: ENSP00000394173.2:p.Val675Ala
  variant of: http://identifiers.org/hgnc/30313
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10527
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2908
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1585
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5739
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3867
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 843
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7815
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9682
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2513
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 736
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1079
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11867
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Val5152Ala
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: African
population: Other
population: East Asian
population: Latino
population: European (Finnish)
reference allele: A
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: QD

1-19403269-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19403269
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 19403269
    reference: chr 1
allele count: 1
allele frequency: 8.237775141689733e-6
allele num: 121392
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364372
  ensembl transcript: ENST00000375224
  gene symbol: UBR4
  hgvsc: ENST00000375224.1:c.2573C>T
  hgvsp: ENSP00000364372.1:p.Pro858Leu
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364373
  ensembl transcript: ENST00000375225
  gene symbol: UBR4
  hgvsc: ENST00000375225.3:c.677C>T
  hgvsp: ENSP00000364373.3:p.Pro226Leu
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364416
  ensembl transcript: ENST00000375267
  gene symbol: UBR4
  hgvsc: ENST00000375267.2:c.15515C>T
  hgvsp: ENSP00000364416.2:p.Pro5172Leu
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364365
  ensembl transcript: ENST00000375217
  gene symbol: UBR4
  hgvsc: ENST00000375217.2:c.15431C>T
  hgvsp: ENSP00000364365.2:p.Pro5144Leu
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000394173
  ensembl transcript: ENST00000429347
  gene symbol: UBR4
  hgvsc: ENST00000429347.2:c.2021C>T
  hgvsp: ENSP00000394173.2:p.Pro674Leu
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000444070
  ensembl transcript: ENST00000543981
  gene symbol: UBR4
  hgvsc: ENST00000543981.1:c.2444C>T
  hgvsp: ENSP00000444070.1:p.Pro815Leu
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364374
  ensembl transcript: ENST00000375226
  gene symbol: UBR4
  hgvsc: ENST00000375226.2:c.15380C>T
  hgvsp: ENSP00000364374.2:p.Pro5127Leu
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364403
  ensembl transcript: ENST00000375254
  gene symbol: UBR4
  hgvsc: ENST00000375254.3:c.15452C>T
  hgvsp: ENSP00000364403.3:p.Pro5151Leu
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000127481
  ensembl transcript: ENST00000486515
  gene symbol: UBR4
  hgvsc: ENST00000486515.1:n.171C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000127481
  ensembl transcript: ENST00000459947
  gene symbol: UBR4
  hgvsc: ENST00000459947.1:n.3459C>T
  variant of: http://identifiers.org/hgnc/30313
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9682
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10530
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11864
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1079
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2514
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2907
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1585
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3867
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5739
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7816
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 842
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 736
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Pro5151Leu
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: Other
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: MQ

1-19403300-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19403300
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 19403300
    reference: chr 1
allele count: 1
allele frequency: 8.25300409349003e-6
allele num: 121168
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364374
  ensembl transcript: ENST00000375226
  gene symbol: UBR4
  hgvsc: ENST00000375226.2:c.15349G>A
  hgvsp: ENSP00000364374.2:p.Ala5117Thr
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000394173
  ensembl transcript: ENST00000429347
  gene symbol: UBR4
  hgvsc: ENST00000429347.2:c.1990G>A
  hgvsp: ENSP00000394173.2:p.Ala664Thr
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364373
  ensembl transcript: ENST00000375225
  gene symbol: UBR4
  hgvsc: ENST00000375225.3:c.646G>A
  hgvsp: ENSP00000364373.3:p.Ala216Thr
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364365
  ensembl transcript: ENST00000375217
  gene symbol: UBR4
  hgvsc: ENST00000375217.2:c.15400G>A
  hgvsp: ENSP00000364365.2:p.Ala5134Thr
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364372
  ensembl transcript: ENST00000375224
  gene symbol: UBR4
  hgvsc: ENST00000375224.1:c.2542G>A
  hgvsp: ENSP00000364372.1:p.Ala848Thr
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000127481
  ensembl transcript: ENST00000486515
  gene symbol: UBR4
  hgvsc: ENST00000486515.1:n.140G>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364403
  ensembl transcript: ENST00000375254
  gene symbol: UBR4
  hgvsc: ENST00000375254.3:c.15421G>A
  hgvsp: ENSP00000364403.3:p.Ala5141Thr
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364416
  ensembl transcript: ENST00000375267
  gene symbol: UBR4
  hgvsc: ENST00000375267.2:c.15484G>A
  hgvsp: ENSP00000364416.2:p.Ala5162Thr
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000444070
  ensembl transcript: ENST00000543981
  gene symbol: UBR4
  hgvsc: ENST00000543981.1:c.2413G>A
  hgvsp: ENSP00000444070.1:p.Ala805Thr
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000127481
  ensembl transcript: ENST00000459947
  gene symbol: UBR4
  hgvsc: ENST00000459947.1:n.3428G>A
  variant of: http://identifiers.org/hgnc/30313
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 736
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11852
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2705
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1079
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2513
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1585
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5739
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3867
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10450
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 842
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9679
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7815
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Ala5141Thr
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: African
population: Latino
population: South Asian
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff

1-19403306-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19403306
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 19403306
    reference: chr 1
allele count: 1
allele frequency: 8.271298593879239e-6
allele num: 120900
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000127481
  ensembl transcript: ENST00000486515
  gene symbol: UBR4
  hgvsc: ENST00000486515.1:n.134G>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364372
  ensembl transcript: ENST00000375224
  gene symbol: UBR4
  hgvsc: ENST00000375224.1:c.2536G>A
  hgvsp: ENSP00000364372.1:p.Asp846Asn
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000444070
  ensembl transcript: ENST00000543981
  gene symbol: UBR4
  hgvsc: ENST00000543981.1:c.2407G>A
  hgvsp: ENSP00000444070.1:p.Asp803Asn
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000127481
  ensembl transcript: ENST00000459947
  gene symbol: UBR4
  hgvsc: ENST00000459947.1:n.3422G>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364403
  ensembl transcript: ENST00000375254
  gene symbol: UBR4
  hgvsc: ENST00000375254.3:c.15415G>A
  hgvsp: ENSP00000364403.3:p.Asp5139Asn
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364373
  ensembl transcript: ENST00000375225
  gene symbol: UBR4
  hgvsc: ENST00000375225.3:c.640G>A
  hgvsp: ENSP00000364373.3:p.Asp214Asn
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364416
  ensembl transcript: ENST00000375267
  gene symbol: UBR4
  hgvsc: ENST00000375267.2:c.15478G>A
  hgvsp: ENSP00000364416.2:p.Asp5160Asn
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364374
  ensembl transcript: ENST00000375226
  gene symbol: UBR4
  hgvsc: ENST00000375226.2:c.15343G>A
  hgvsp: ENSP00000364374.2:p.Asp5115Asn
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364365
  ensembl transcript: ENST00000375217
  gene symbol: UBR4
  hgvsc: ENST00000375217.2:c.15394G>A
  hgvsp: ENSP00000364365.2:p.Asp5132Asn
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000394173
  ensembl transcript: ENST00000429347
  gene symbol: UBR4
  hgvsc: ENST00000429347.2:c.1984G>A
  hgvsp: ENSP00000394173.2:p.Asp662Asn
  variant of: http://identifiers.org/hgnc/30313
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2625
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3867
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10285
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5739
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1079
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9651
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11761
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2513
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7815
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 841
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 736
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1586
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14979
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Asp5139Asn
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Other
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum

1-19403307-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19403307
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 19403307
    reference: chr 1
allele count: 6
allele frequency: 4.963025460320612e-5
allele num: 120894
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364373
  ensembl transcript: ENST00000375225
  gene symbol: UBR4
  hgvsc: ENST00000375225.3:c.639C>T
  hgvsp: ENST00000375225.3:c.639C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000444070
  ensembl transcript: ENST00000543981
  gene symbol: UBR4
  hgvsc: ENST00000543981.1:c.2406C>T
  hgvsp: ENST00000543981.1:c.2406C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364372
  ensembl transcript: ENST00000375224
  gene symbol: UBR4
  hgvsc: ENST00000375224.1:c.2535C>T
  hgvsp: ENST00000375224.1:c.2535C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364403
  ensembl transcript: ENST00000375254
  gene symbol: UBR4
  hgvsc: ENST00000375254.3:c.15414C>T
  hgvsp: ENST00000375254.3:c.15414C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364416
  ensembl transcript: ENST00000375267
  gene symbol: UBR4
  hgvsc: ENST00000375267.2:c.15477C>T
  hgvsp: ENST00000375267.2:c.15477C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000394173
  ensembl transcript: ENST00000429347
  gene symbol: UBR4
  hgvsc: ENST00000429347.2:c.1983C>T
  hgvsp: ENST00000429347.2:c.1983C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364374
  ensembl transcript: ENST00000375226
  gene symbol: UBR4
  hgvsc: ENST00000375226.2:c.15342C>T
  hgvsp: ENST00000375226.2:c.15342C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000127481
  ensembl transcript: ENST00000459947
  gene symbol: UBR4
  hgvsc: ENST00000459947.1:n.3421C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000127481
  ensembl transcript: ENST00000486515
  gene symbol: UBR4
  hgvsc: ENST00000486515.1:n.133C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364365
  ensembl transcript: ENST00000375217
  gene symbol: UBR4
  hgvsc: ENST00000375217.2:c.15393C>T
  hgvsp: ENST00000375217.2:c.15393C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30313
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2514
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 736
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9643
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7810
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 840
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11736
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1079
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5739
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10293
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2650
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1586
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3869
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4672
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Ala5138Ala
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Other
population: African
population: South Asian
population: European (Finnish)
population: Latino
reference allele: G
site quality: QD
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff

1-19403315-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19403315
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 19403315
    reference: chr 1
allele count: 1
allele frequency: 8.301786544464368e-6
allele num: 120456
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000394173
  ensembl transcript: ENST00000429347
  gene symbol: UBR4
  hgvsc: ENST00000429347.2:c.1975G>A
  hgvsp: ENSP00000394173.2:p.Glu659Lys
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000444070
  ensembl transcript: ENST00000543981
  gene symbol: UBR4
  hgvsc: ENST00000543981.1:c.2398G>A
  hgvsp: ENSP00000444070.1:p.Glu800Lys
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364416
  ensembl transcript: ENST00000375267
  gene symbol: UBR4
  hgvsc: ENST00000375267.2:c.15469G>A
  hgvsp: ENSP00000364416.2:p.Glu5157Lys
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364374
  ensembl transcript: ENST00000375226
  gene symbol: UBR4
  hgvsc: ENST00000375226.2:c.15334G>A
  hgvsp: ENSP00000364374.2:p.Glu5112Lys
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000127481
  ensembl transcript: ENST00000486515
  gene symbol: UBR4
  hgvsc: ENST00000486515.1:n.125G>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364365
  ensembl transcript: ENST00000375217
  gene symbol: UBR4
  hgvsc: ENST00000375217.2:c.15385G>A
  hgvsp: ENSP00000364365.2:p.Glu5129Lys
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000127481
  ensembl transcript: ENST00000459947
  gene symbol: UBR4
  hgvsc: ENST00000459947.1:n.3413G>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364403
  ensembl transcript: ENST00000375254
  gene symbol: UBR4
  hgvsc: ENST00000375254.3:c.15406G>A
  hgvsp: ENSP00000364403.3:p.Glu5136Lys
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364372
  ensembl transcript: ENST00000375224
  gene symbol: UBR4
  hgvsc: ENST00000375224.1:c.2527G>A
  hgvsp: ENSP00000364372.1:p.Glu843Lys
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364373
  ensembl transcript: ENST00000375225
  gene symbol: UBR4
  hgvsc: ENST00000375225.3:c.631G>A
  hgvsp: ENSP00000364373.3:p.Glu211Lys
  variant of: http://identifiers.org/hgnc/30313
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2513
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9628
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 736
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11562
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7805
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2632
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5739
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10005
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1586
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3868
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 837
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1079
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5027
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Glu5136Lys
num of homozygotes: 0
population: South Asian
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: European (Finnish)
reference allele: C
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum

1-19403316-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19403316
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 19403316
    reference: chr 1
allele count: 17
allele frequency: 1.411350579483944e-4
allele num: 120452
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364374
  ensembl transcript: ENST00000375226
  gene symbol: UBR4
  hgvsc: ENST00000375226.2:c.15333C>T
  hgvsp: ENST00000375226.2:c.15333C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364373
  ensembl transcript: ENST00000375225
  gene symbol: UBR4
  hgvsc: ENST00000375225.3:c.630C>T
  hgvsp: ENST00000375225.3:c.630C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364416
  ensembl transcript: ENST00000375267
  gene symbol: UBR4
  hgvsc: ENST00000375267.2:c.15468C>T
  hgvsp: ENST00000375267.2:c.15468C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364403
  ensembl transcript: ENST00000375254
  gene symbol: UBR4
  hgvsc: ENST00000375254.3:c.15405C>T
  hgvsp: ENST00000375254.3:c.15405C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000127481
  ensembl transcript: ENST00000486515
  gene symbol: UBR4
  hgvsc: ENST00000486515.1:n.124C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000127481
  ensembl transcript: ENST00000459947
  gene symbol: UBR4
  hgvsc: ENST00000459947.1:n.3412C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364365
  ensembl transcript: ENST00000375217
  gene symbol: UBR4
  hgvsc: ENST00000375217.2:c.15384C>T
  hgvsp: ENST00000375217.2:c.15384C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000444070
  ensembl transcript: ENST00000543981
  gene symbol: UBR4
  hgvsc: ENST00000543981.1:c.2397C>T
  hgvsp: ENST00000543981.1:c.2397C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000394173
  ensembl transcript: ENST00000429347
  gene symbol: UBR4
  hgvsc: ENST00000429347.2:c.1974C>T
  hgvsp: ENST00000429347.2:c.1974C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364372
  ensembl transcript: ENST00000375224
  gene symbol: UBR4
  hgvsc: ENST00000375224.1:c.2526C>T
  hgvsp: ENST00000375224.1:c.2526C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30313
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3868
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1587
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5739
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2652
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7802
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9623
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10003
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 534
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1079
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 736
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 838
  bin: 9.75e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 2513
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11541
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 121
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Tyr5135Tyr
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: Other
population: South Asian
population: African
reference allele: G
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP

1-19403322-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19403322
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 19403322
    reference: chr 1
allele count: 14
allele frequency: 1.166180758017493e-4
allele num: 120050
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364365
  ensembl transcript: ENST00000375217
  gene symbol: UBR4
  hgvsc: ENST00000375217.2:c.15378C>T
  hgvsp: ENST00000375217.2:c.15378C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364373
  ensembl transcript: ENST00000375225
  gene symbol: UBR4
  hgvsc: ENST00000375225.3:c.624C>T
  hgvsp: ENST00000375225.3:c.624C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364372
  ensembl transcript: ENST00000375224
  gene symbol: UBR4
  hgvsc: ENST00000375224.1:c.2520C>T
  hgvsp: ENST00000375224.1:c.2520C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000444070
  ensembl transcript: ENST00000543981
  gene symbol: UBR4
  hgvsc: ENST00000543981.1:c.2391C>T
  hgvsp: ENST00000543981.1:c.2391C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364416
  ensembl transcript: ENST00000375267
  gene symbol: UBR4
  hgvsc: ENST00000375267.2:c.15462C>T
  hgvsp: ENST00000375267.2:c.15462C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364374
  ensembl transcript: ENST00000375226
  gene symbol: UBR4
  hgvsc: ENST00000375226.2:c.15327C>T
  hgvsp: ENST00000375226.2:c.15327C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364403
  ensembl transcript: ENST00000375254
  gene symbol: UBR4
  hgvsc: ENST00000375254.3:c.15399C>T
  hgvsp: ENST00000375254.3:c.15399C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000394173
  ensembl transcript: ENST00000429347
  gene symbol: UBR4
  hgvsc: ENST00000429347.2:c.1968C>T
  hgvsp: ENST00000429347.2:c.1968C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000127481
  ensembl transcript: ENST00000486515
  gene symbol: UBR4
  hgvsc: ENST00000486515.1:n.118C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000127481
  ensembl transcript: ENST00000459947
  gene symbol: UBR4
  hgvsc: ENST00000459947.1:n.3406C>T
  variant of: http://identifiers.org/hgnc/30313
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1079
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7806
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2514
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11462
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 737
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 659
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9689
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2541
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5738
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 594
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 774
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3870
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9619
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 822
  bin: 9.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1586
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1219
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Pro5133Pro
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: African
population: Other
population: East Asian
population: South Asian
population: European (Finnish)
reference allele: G
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum

1-19403327-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19403327
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 19403327
    reference: chr 1
allele count: 1
allele frequency: 8.357989402069439e-6
allele num: 119646
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000127481
  ensembl transcript: ENST00000459947
  gene symbol: UBR4
  hgvsc: ENST00000459947.1:n.3401A>G
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364365
  ensembl transcript: ENST00000375217
  gene symbol: UBR4
  hgvsc: ENST00000375217.2:c.15373A>G
  hgvsp: ENSP00000364365.2:p.Met5125Val
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364403
  ensembl transcript: ENST00000375254
  gene symbol: UBR4
  hgvsc: ENST00000375254.3:c.15394A>G
  hgvsp: ENSP00000364403.3:p.Met5132Val
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364416
  ensembl transcript: ENST00000375267
  gene symbol: UBR4
  hgvsc: ENST00000375267.2:c.15457A>G
  hgvsp: ENSP00000364416.2:p.Met5153Val
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364373
  ensembl transcript: ENST00000375225
  gene symbol: UBR4
  hgvsc: ENST00000375225.3:c.619A>G
  hgvsp: ENSP00000364373.3:p.Met207Val
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364372
  ensembl transcript: ENST00000375224
  gene symbol: UBR4
  hgvsc: ENST00000375224.1:c.2515A>G
  hgvsp: ENSP00000364372.1:p.Met839Val
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364374
  ensembl transcript: ENST00000375226
  gene symbol: UBR4
  hgvsc: ENST00000375226.2:c.15322A>G
  hgvsp: ENSP00000364374.2:p.Met5108Val
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000444070
  ensembl transcript: ENST00000543981
  gene symbol: UBR4
  hgvsc: ENST00000543981.1:c.2386A>G
  hgvsp: ENSP00000444070.1:p.Met796Val
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000394173
  ensembl transcript: ENST00000429347
  gene symbol: UBR4
  hgvsc: ENST00000429347.2:c.1963A>G
  hgvsp: ENSP00000394173.2:p.Met655Val
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000127481
  ensembl transcript: ENST00000486515
  gene symbol: UBR4
  hgvsc: ENST00000486515.1:n.113A>G
  variant of: http://identifiers.org/hgnc/30313
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7805
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5738
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 863
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 737
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9617
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11388
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 967
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9408
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2515
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 595
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3872
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1079
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 808
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1586
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2442
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2922
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 200
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Met5132Val
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
population: South Asian
population: East Asian
population: Other
reference allele: T
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: MQ

1-19403331-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19403331
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 19403331
    reference: chr 1
allele count: 49
allele frequency: 4.110324463980136e-4
allele num: 119212
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364365
  ensembl transcript: ENST00000375217
  gene symbol: UBR4
  hgvsc: ENST00000375217.2:c.15369C>T
  hgvsp: ENST00000375217.2:c.15369C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000444070
  ensembl transcript: ENST00000543981
  gene symbol: UBR4
  hgvsc: ENST00000543981.1:c.2382C>T
  hgvsp: ENST00000543981.1:c.2382C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364403
  ensembl transcript: ENST00000375254
  gene symbol: UBR4
  hgvsc: ENST00000375254.3:c.15390C>T
  hgvsp: ENST00000375254.3:c.15390C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364373
  ensembl transcript: ENST00000375225
  gene symbol: UBR4
  hgvsc: ENST00000375225.3:c.615C>T
  hgvsp: ENST00000375225.3:c.615C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000127481
  ensembl transcript: ENST00000486515
  gene symbol: UBR4
  hgvsc: ENST00000486515.1:n.109C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364372
  ensembl transcript: ENST00000375224
  gene symbol: UBR4
  hgvsc: ENST00000375224.1:c.2511C>T
  hgvsp: ENST00000375224.1:c.2511C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364374
  ensembl transcript: ENST00000375226
  gene symbol: UBR4
  hgvsc: ENST00000375226.2:c.15318C>T
  hgvsp: ENST00000375226.2:c.15318C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000394173
  ensembl transcript: ENST00000429347
  gene symbol: UBR4
  hgvsc: ENST00000429347.2:c.1959C>T
  hgvsp: ENST00000429347.2:c.1959C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364416
  ensembl transcript: ENST00000375267
  gene symbol: UBR4
  hgvsc: ENST00000375267.2:c.15453C>T
  hgvsp: ENST00000375267.2:c.15453C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000127481
  ensembl transcript: ENST00000459947
  gene symbol: UBR4
  hgvsc: ENST00000459947.1:n.3397C>T
  variant of: http://identifiers.org/hgnc/30313
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2352
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 398
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 815
  bin: 9.75e1
  variant carriers: 46
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1178
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1586
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11314
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2514
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9607
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7805
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9106
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5738
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1063
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3871
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 595
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1079
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 737
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19399
  bin: 9.75e1
  variant carriers: 48
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Asn5130Asn
num of homozygotes: 1
population: East Asian
population: African
population: European (Finnish)
population: Other
population: South Asian
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum

1-19403333-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19403333
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 19403333
    reference: chr 1
allele count: 1
allele frequency: 8.407883231317684e-6
allele num: 118936
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000127481
  ensembl transcript: ENST00000459947
  gene symbol: UBR4
  hgvsc: ENST00000459947.1:n.3395A>G
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364374
  ensembl transcript: ENST00000375226
  gene symbol: UBR4
  hgvsc: ENST00000375226.2:c.15316A>G
  hgvsp: ENSP00000364374.2:p.Asn5106Asp
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364365
  ensembl transcript: ENST00000375217
  gene symbol: UBR4
  hgvsc: ENST00000375217.2:c.15367A>G
  hgvsp: ENSP00000364365.2:p.Asn5123Asp
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000444070
  ensembl transcript: ENST00000543981
  gene symbol: UBR4
  hgvsc: ENST00000543981.1:c.2380A>G
  hgvsp: ENSP00000444070.1:p.Asn794Asp
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364373
  ensembl transcript: ENST00000375225
  gene symbol: UBR4
  hgvsc: ENST00000375225.3:c.613A>G
  hgvsp: ENSP00000364373.3:p.Asn205Asp
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364372
  ensembl transcript: ENST00000375224
  gene symbol: UBR4
  hgvsc: ENST00000375224.1:c.2509A>G
  hgvsp: ENSP00000364372.1:p.Asn837Asp
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000394173
  ensembl transcript: ENST00000429347
  gene symbol: UBR4
  hgvsc: ENST00000429347.2:c.1957A>G
  hgvsp: ENSP00000394173.2:p.Asn653Asp
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364416
  ensembl transcript: ENST00000375267
  gene symbol: UBR4
  hgvsc: ENST00000375267.2:c.15451A>G
  hgvsp: ENSP00000364416.2:p.Asn5151Asp
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364403
  ensembl transcript: ENST00000375254
  gene symbol: UBR4
  hgvsc: ENST00000375254.3:c.15388A>G
  hgvsp: ENSP00000364403.3:p.Asn5130Asp
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000127481
  ensembl transcript: ENST00000486515
  gene symbol: UBR4
  hgvsc: ENST00000486515.1:n.107A>G
  variant of: http://identifiers.org/hgnc/30313
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1591
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3874
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7806
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2516
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1078
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11275
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5741
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1309
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2277
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 738
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9611
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1194
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 596
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 774
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8916
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 170
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4642
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Asn5130Asp
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: Other
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: T
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: ClippingRankSum

1-19403335-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19403335
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 19403335
    reference: chr 1
allele count: 1
allele frequency: 8.409438754057554e-6
allele num: 118914
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364403
  ensembl transcript: ENST00000375254
  gene symbol: UBR4
  hgvsc: ENST00000375254.3:c.15386A>C
  hgvsp: ENSP00000364403.3:p.His5129Pro
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000127481
  ensembl transcript: ENST00000459947
  gene symbol: UBR4
  hgvsc: ENST00000459947.1:n.3393A>C
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000394173
  ensembl transcript: ENST00000429347
  gene symbol: UBR4
  hgvsc: ENST00000429347.2:c.1955A>C
  hgvsp: ENSP00000394173.2:p.His652Pro
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364374
  ensembl transcript: ENST00000375226
  gene symbol: UBR4
  hgvsc: ENST00000375226.2:c.15314A>C
  hgvsp: ENSP00000364374.2:p.His5105Pro
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364416
  ensembl transcript: ENST00000375267
  gene symbol: UBR4
  hgvsc: ENST00000375267.2:c.15449A>C
  hgvsp: ENSP00000364416.2:p.His5150Pro
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364373
  ensembl transcript: ENST00000375225
  gene symbol: UBR4
  hgvsc: ENST00000375225.3:c.611A>C
  hgvsp: ENSP00000364373.3:p.His204Pro
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364372
  ensembl transcript: ENST00000375224
  gene symbol: UBR4
  hgvsc: ENST00000375224.1:c.2507A>C
  hgvsp: ENSP00000364372.1:p.His836Pro
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364365
  ensembl transcript: ENST00000375217
  gene symbol: UBR4
  hgvsc: ENST00000375217.2:c.15365A>C
  hgvsp: ENSP00000364365.2:p.His5122Pro
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000127481
  ensembl transcript: ENST00000486515
  gene symbol: UBR4
  hgvsc: ENST00000486515.1:n.105A>C
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000444070
  ensembl transcript: ENST00000543981
  gene symbol: UBR4
  hgvsc: ENST00000543981.1:c.2378A>C
  hgvsp: ENSP00000444070.1:p.His793Pro
  variant of: http://identifiers.org/hgnc/30313
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5741
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 773
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1203
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1308
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3874
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2516
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11266
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2305
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9611
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8896
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1591
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 738
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 596
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7807
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1078
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6338
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 264
  bin: 3.25e1
  variant carriers: 0
hgvs: p.His5129Pro
num of homozygotes: 0
population: East Asian
population: African
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: South Asian
reference allele: T
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP

1-19403340-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19403340
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 19403340
    reference: chr 1
allele count: 1
allele frequency: 8.461811843151855e-6
allele num: 118178
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000127481
  ensembl transcript: ENST00000486515
  gene symbol: UBR4
  hgvsc: ENST00000486515.1:n.100C>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000444070
  ensembl transcript: ENST00000543981
  gene symbol: UBR4
  hgvsc: ENST00000543981.1:c.2373C>A
  hgvsp: ENST00000543981.1:c.2373C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000127481
  ensembl transcript: ENST00000459947
  gene symbol: UBR4
  hgvsc: ENST00000459947.1:n.3388C>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364372
  ensembl transcript: ENST00000375224
  gene symbol: UBR4
  hgvsc: ENST00000375224.1:c.2502C>A
  hgvsp: ENST00000375224.1:c.2502C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364373
  ensembl transcript: ENST00000375225
  gene symbol: UBR4
  hgvsc: ENST00000375225.3:c.606C>A
  hgvsp: ENST00000375225.3:c.606C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364365
  ensembl transcript: ENST00000375217
  gene symbol: UBR4
  hgvsc: ENST00000375217.2:c.15360C>A
  hgvsp: ENST00000375217.2:c.15360C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000394173
  ensembl transcript: ENST00000429347
  gene symbol: UBR4
  hgvsc: ENST00000429347.2:c.1950C>A
  hgvsp: ENST00000429347.2:c.1950C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364416
  ensembl transcript: ENST00000375267
  gene symbol: UBR4
  hgvsc: ENST00000375267.2:c.15444C>A
  hgvsp: ENST00000375267.2:c.15444C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364403
  ensembl transcript: ENST00000375254
  gene symbol: UBR4
  hgvsc: ENST00000375254.3:c.15381C>A
  hgvsp: ENST00000375254.3:c.15381C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364374
  ensembl transcript: ENST00000375226
  gene symbol: UBR4
  hgvsc: ENST00000375226.2:c.15309C>A
  hgvsp: ENST00000375226.2:c.15309C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30313
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8565
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5742
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3876
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1658
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7809
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 747
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1529
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1592
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 596
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 481
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9608
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2520
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11207
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 740
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1969
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1082
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Ile5127Ile
num of homozygotes: 0
population: African
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Latino
population: Other
reference allele: G
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD

1-19403342-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19403342
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 19403342
    reference: chr 1
allele count: 1
allele frequency: 8.4742890071523e-6
allele num: 118004
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000127481
  ensembl transcript: ENST00000459947
  gene symbol: UBR4
  hgvsc: ENST00000459947.1:n.3386A>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364365
  ensembl transcript: ENST00000375217
  gene symbol: UBR4
  hgvsc: ENST00000375217.2:c.15358A>T
  hgvsp: ENSP00000364365.2:p.Ile5120Phe
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000127481
  ensembl transcript: ENST00000486515
  gene symbol: UBR4
  hgvsc: ENST00000486515.1:n.98A>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364373
  ensembl transcript: ENST00000375225
  gene symbol: UBR4
  hgvsc: ENST00000375225.3:c.604A>T
  hgvsp: ENSP00000364373.3:p.Ile202Phe
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364416
  ensembl transcript: ENST00000375267
  gene symbol: UBR4
  hgvsc: ENST00000375267.2:c.15442A>T
  hgvsp: ENSP00000364416.2:p.Ile5148Phe
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364403
  ensembl transcript: ENST00000375254
  gene symbol: UBR4
  hgvsc: ENST00000375254.3:c.15379A>T
  hgvsp: ENSP00000364403.3:p.Ile5127Phe
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364374
  ensembl transcript: ENST00000375226
  gene symbol: UBR4
  hgvsc: ENST00000375226.2:c.15307A>T
  hgvsp: ENSP00000364374.2:p.Ile5103Phe
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000444070
  ensembl transcript: ENST00000543981
  gene symbol: UBR4
  hgvsc: ENST00000543981.1:c.2371A>T
  hgvsp: ENSP00000444070.1:p.Ile791Phe
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364372
  ensembl transcript: ENST00000375224
  gene symbol: UBR4
  hgvsc: ENST00000375224.1:c.2500A>T
  hgvsp: ENSP00000364372.1:p.Ile834Phe
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000394173
  ensembl transcript: ENST00000429347
  gene symbol: UBR4
  hgvsc: ENST00000429347.2:c.1948A>T
  hgvsp: ENSP00000394173.2:p.Ile650Phe
  variant of: http://identifiers.org/hgnc/30313
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1890
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9608
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5742
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 748
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 503
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7808
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1592
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1768
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 740
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2519
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8424
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1617
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11193
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1081
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3876
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 596
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 353
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Ile5127Phe
num of homozygotes: 0
population: Other
population: European (Finnish)
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Latino
reference allele: T
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum

1-19403352-G-A
type: Variant
allele count: 148
allele frequency: 1.268796186753082e-3
allele num: 116646
alternate allele: A
canonical: true
consequence: synonymous
filter: PASS
hgvs: p.Leu5123Leu
num of homozygotes: 0
reference allele: G

South Asian
type: Population
allele count: 25
allele frequency: 3.362022592791824e-3
allele num: 7436
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 138
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.063829787234043e-2
allele num: 94
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 120
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.969e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.2e-1

MQRankSum
type: SiteQuality
SIO_000300: -8.500000000000001e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 2.09e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.93e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 2.74e0

QD
type: SiteQuality
SIO_000300: 1.401e1

DP
type: SiteQuality
SIO_000300: 1.34864e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.77e-1

South Asian
type: Population
allele count: 7
allele frequency: 9.446693657219973e-4
allele num: 7410
num of homozygotes: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 136
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2736
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 120
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 6.89e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.521e0

VQSLOD
type: SiteQuality
SIO_000300: -4.329e0

FS
type: SiteQuality
SIO_000300: 8.502000000000001e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.07e-2

MQRankSum
type: SiteQuality
SIO_000300: -2.25e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.08e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.01e-1

MQ
type: SiteQuality
SIO_000300: 5.907e1

DP
type: SiteQuality
SIO_000300: 1.32045e5

South Asian
type: Population
allele count: 9
allele frequency: 1.251738525730181e-3
allele num: 7190
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2476
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 5.263157894736842e-3
allele num: 190
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 112
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.35139e5

VQSLOD
type: SiteQuality
SIO_000300: 1.16e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.42e-1

MQ
type: SiteQuality
SIO_000300: 5.906e1

QD
type: SiteQuality
SIO_000300: 6.44e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.85e-2

MQRankSum
type: SiteQuality
SIO_000300: -1.91e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.19e-1

FS
type: SiteQuality
SIO_000300: 4.885e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.66e-1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 112
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 88
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 118
num of homozygotes: 0

South Asian
type: Population
allele count: 5
allele frequency: 6.954102920723226e-4
allele num: 7190
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.66e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.19e-1

MQ
type: SiteQuality
SIO_000300: 5.906e1

VQSLOD
type: SiteQuality
SIO_000300: 1.16e0

FS
type: SiteQuality
SIO_000300: 4.885e0

DP
type: SiteQuality
SIO_000300: 1.35139e5

MQRankSum
type: SiteQuality
SIO_000300: -1.91e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.42e-1

QD
type: SiteQuality
SIO_000300: 6.44e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.85e-2

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 42
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 266
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 24
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 4.859086491739553e-4
allele num: 2058
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 3.07e0

MQ
type: SiteQuality
SIO_000300: 5.308e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.143e0

MQRankSum
type: SiteQuality
SIO_000300: -1.588e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.858e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.53e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.31e-2

FS
type: SiteQuality
SIO_000300: 5.478e0

VQSLOD
type: SiteQuality
SIO_000300: -6.693e-1

DP
type: SiteQuality
SIO_000300: 4.5751e4

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 158
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 20
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.9e-2

FS
type: SiteQuality
SIO_000300: 2.444e0

VQSLOD
type: SiteQuality
SIO_000300: -1.682e0

QD
type: SiteQuality
SIO_000300: 1.283e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.43e-1

DP
type: SiteQuality
SIO_000300: 2.9851e4

MQRankSum
type: SiteQuality
SIO_000300: -8.76e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.54e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 1.16e0

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 18
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 20
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 288
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.39e-2

QD
type: SiteQuality
SIO_000300: 1.048e1

DP
type: SiteQuality
SIO_000300: 3.2776e4

BaseQRankSum
type: SiteQuality
SIO_000300: 1.38e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.106e0

VQSLOD
type: SiteQuality
SIO_000300: -1.238e0

MQRankSum
type: SiteQuality
SIO_000300: -7.15e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.15e-1

GenotypeQuality
all individuals: 1291
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1497
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5361
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3352
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1602
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 547
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 395
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 340
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5760
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1118
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1131
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7737
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8506
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3715
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3585
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 782
bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14932
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 808
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10026
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5524
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9168
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.633826749011535e-5
allele num: 61206
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7852
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 3.29e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.28e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.791e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.72e-1

QD
type: SiteQuality
SIO_000300: 8.470000000000001e0

MQRankSum
type: SiteQuality
SIO_000300: -5.4e-2

FS
type: SiteQuality
SIO_000300: 3.782e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

DP
type: SiteQuality
SIO_000300: 1.465104e6

GenotypeQuality
all individuals: 1061
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 479
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 347
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3484
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1268
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5709
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 763
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3309
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5000
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 625
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7878
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2921
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 532
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5597
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1172
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1445
bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7728
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 796
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14782
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5328
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9830
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.65174589541145e-5
allele num: 60542
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9084
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.44e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.26e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.56e-1

DP
type: SiteQuality
SIO_000300: 1.465784e6

MQRankSum
type: SiteQuality
SIO_000300: 5.56e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.25e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.37e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.4e-3

GenotypeQuality
all individuals: 136
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5371
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15376
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3300
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5976
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5049
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 543
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2840
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 555
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1120
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 454
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1592
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2369
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8497
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1351
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 784
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 61438
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14954
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.270971021860702e-4
allele num: 7868
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10064
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5554
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 802
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9220
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.9e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 6.36e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.36e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.91e0

VQSLOD
type: SiteQuality
SIO_000300: 2.0e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.184e0

QD
type: SiteQuality
SIO_000300: 1.539e1

DP
type: SiteQuality
SIO_000300: 1.509189e6

GenotypeQuality
all individuals: 805
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 236
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8509
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2789
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4383
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 162
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1249
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3944
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 582
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1220
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3376
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5743
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 723
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1483
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 684
bin: 5.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5630
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9304
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10224
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15072
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7950
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.614205004035513e-5
allele num: 61950
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 816
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -2.473e0

QD
type: SiteQuality
SIO_000300: 3.65e0

FS
type: SiteQuality
SIO_000300: 1.847e0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.05e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.05e-1

DP
type: SiteQuality
SIO_000300: 1.569432e6

MQRankSum
type: SiteQuality
SIO_000300: 1.12e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.09e-1

GenotypeQuality
all individuals: 1751
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1515
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2638
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 126
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 976
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5673
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 809
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 164
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8515
bin: 9.75e1
variant carriers: 6

GenotypeQuality
all individuals: 510
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 251
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2895
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1205
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1037
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 593
bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7960
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.071581654522075e-4
allele num: 9332
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.610150388046243e-5
allele num: 62106
num of homozygotes: 0

South Asian
type: Population
allele count: 4
allele frequency: 2.645502645502646e-4
allele num: 15120
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10264
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 820
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5628
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 9.11e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.58e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.0e-2

FS
type: SiteQuality
SIO_000300: 3.031e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -2.78e-1

DP
type: SiteQuality
SIO_000300: 1.584657e6

QD
type: SiteQuality
SIO_000300: 1.198e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.1e-2

GenotypeQuality
all individuals: 1836
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 138
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 618
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26833
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5027
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 821
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 153
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 105
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2114
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2923
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 613
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1620
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 650
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1820
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1255
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8526
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 620
bin: 5.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8078
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10436
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5708
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.316135825217162e-4
allele num: 15196
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62698
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 826
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9400
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.2e-1

FS
type: SiteQuality
SIO_000300: 5.468e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.820000000000001e-1

MQ
type: SiteQuality
SIO_000300: 5.939e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.19e0

VQSLOD
type: SiteQuality
SIO_000300: 6.71e-1

QD
type: SiteQuality
SIO_000300: 1.212e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.8e-2

DP
type: SiteQuality
SIO_000300: 1.63037e6

GenotypeQuality
all individuals: 78
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 118
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1287
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2544
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1654
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 522
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 386
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8536
bin: 9.75e1
variant carriers: 6

GenotypeQuality
all individuals: 823
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4568
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4746
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1471
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 543
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 623
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1882
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28297
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1900
bin: 2.75e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 9.502090459901178e-5
allele num: 10524
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8128
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.943568886629384e-5
allele num: 62944
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15252
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9452
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 826
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5770
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.906e1

QD
type: SiteQuality
SIO_000300: 1.092e1

MQRankSum
type: SiteQuality
SIO_000300: 2.01e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.11e-1

FS
type: SiteQuality
SIO_000300: 1.349e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.56e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.41e0

DP
type: SiteQuality
SIO_000300: 1.649106e6

ClippingRankSum
type: SiteQuality
SIO_000300: -6.76e-1

GenotypeQuality
all individuals: 127
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 731
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1376
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8553
bin: 9.75e1
variant carriers: 24

GenotypeQuality
all individuals: 1681
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1810
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 632
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 120
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4564
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1294
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 666
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 552
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1921
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 497
bin: 4.25e1
variant carriers: 1

GenotypeQuality
all individuals: 4620
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 826
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5790
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8160
num of homozygotes: 0

South Asian
type: Population
allele count: 19
allele frequency: 1.241181081787301e-3
allele num: 15308
num of homozygotes: 0

Latino
type: Population
allele count: 4
allele frequency: 3.793626707132018e-4
allele num: 10544
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.055297593921486e-4
allele num: 9476
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 828
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.168266641320533e-5
allele num: 63126
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.658732e6

QD
type: SiteQuality
SIO_000300: 1.325e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.2e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -3.8e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.07e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -2.41e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.83e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.9e-2

GenotypeQuality
all individuals: 420
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8543
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 1724
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 384
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2023
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 598
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1127
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1583
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4725
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29780
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 101
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 95
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 634
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1308
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1947
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 832
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 490
bin: 4.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 832
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15354
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10638
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63428
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5834
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9524
num of homozygotes: 0

East Asian
type: Population
allele count: 5
allele frequency: 6.084205402774398e-4
allele num: 8218
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

DP
type: SiteQuality
SIO_000300: 1.673219e6

QD
type: SiteQuality
SIO_000300: 1.259e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.5e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.92e0

FS
type: SiteQuality
SIO_000300: 1.518e0

MQRankSum
type: SiteQuality
SIO_000300: 6.94e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.6e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.1e-2

GenotypeQuality
all individuals: 91
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 103
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 409
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4129
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8543
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 1038
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1334
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 452
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 835
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 637
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30103
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1487
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4782
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1984
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 589
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1858
bin: 3.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63542
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10658
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15404
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9544
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5874
num of homozygotes: 0

East Asian
type: Population
allele count: 3
allele frequency: 3.63901018922853e-4
allele num: 8244
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 842
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.681506e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.4e-3

VQSLOD
type: SiteQuality
SIO_000300: 5.01e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 9.8e-1

QD
type: SiteQuality
SIO_000300: 1.517e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.4e0

FS
type: SiteQuality
SIO_000300: 5.108e0

MQ
type: SiteQuality
SIO_000300: 5.963e1

MQRankSum
type: SiteQuality
SIO_000300: -4.93e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.639999999999999e-1

GenotypeQuality
all individuals: 3279
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5047
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8543
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 18
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 222
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2058
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 207
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1378
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1154
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 955
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 412
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1834
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 836
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33060
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 655
bin: 8.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15624
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.387774594078319e-4
allele num: 8376
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64336
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6004
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9684
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 852
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10876
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -9.66e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.43e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.36e0

FS
type: SiteQuality
SIO_000300: 9.85e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.66e-1

QD
type: SiteQuality
SIO_000300: 1.067e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

DP
type: SiteQuality
SIO_000300: 1.715404e6

ClippingRankSum
type: SiteQuality
SIO_000300: 7.74e-1

GenotypeQuality
all individuals: 840
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 286
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 189
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 7.5e0
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GenotypeQuality
all individuals: 805
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8542
bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 274
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2090
bin: 7.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 854
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8426
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9742
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.546359868868683e-5
allele num: 64668
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10986
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6072
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15718
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.092e1

VQSLOD
type: SiteQuality
SIO_000300: -1.825e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.364e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.73e-1

DP
type: SiteQuality
SIO_000300: 1.726792e6

MQRankSum
type: SiteQuality
SIO_000300: 9.13e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.71e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

FS
type: SiteQuality
SIO_000300: 4.821e0

MQ
type: SiteQuality
SIO_000300: 5.86e1

GenotypeQuality
all individuals: 283
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2102
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1414
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variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 246
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variant carriers: 1

GenotypeQuality
all individuals: 5
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 29

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 205
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variant carriers: 0

GenotypeQuality
all individuals: 2147
bin: 7.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 862
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.007658202337767e-4
allele num: 9924
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8516
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.616553507921112e-4
allele num: 6186
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.955758552749418e-5
allele num: 11166
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 28
allele frequency: 4.286064168503551e-4
allele num: 65328
num of homozygotes: 1

South Asian
type: Population
allele count: 1
allele frequency: 6.270378730875344e-5
allele num: 15948
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.81e-1

FS
type: SiteQuality
SIO_000300: 1.161e0

QD
type: SiteQuality
SIO_000300: 9.289999999999999e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.48e-2

DP
type: SiteQuality
SIO_000300: 1.753263e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 2.51e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.78e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.38e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.8e-2

GenotypeQuality
all individuals: 228
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
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variant carriers: 0

GenotypeQuality
all individuals: 25
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GenotypeQuality
all individuals: 265
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variant carriers: 0

GenotypeQuality
all individuals: 200
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variant carriers: 0

GenotypeQuality
all individuals: 1942
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 8562
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 659
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variant carriers: 0

GenotypeQuality
all individuals: 5466
bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9934
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 862
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11174
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15966
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8520
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.529613313754283e-5
allele num: 65376
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6202
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

MQ
type: SiteQuality
SIO_000300: 5.893e1

VQSLOD
type: SiteQuality
SIO_000300: -3.017e0

QD
type: SiteQuality
SIO_000300: 5.36e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.474e0

MQRankSum
type: SiteQuality
SIO_000300: 4.97e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.56e0

DP
type: SiteQuality
SIO_000300: 1.75476e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.422e0

GenotypeQuality
all individuals: 1944
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1881
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variant carriers: 0

GenotypeQuality
all individuals: 849
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variant carriers: 0

GenotypeQuality
all individuals: 35520
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variant carriers: 0

GenotypeQuality
all individuals: 11
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variant carriers: 0

GenotypeQuality
all individuals: 1432
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variant carriers: 0

GenotypeQuality
all individuals: 6
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 25
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 660
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variant carriers: 0

GenotypeQuality
all individuals: 5484
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variant carriers: 0

GenotypeQuality
all individuals: 274
bin: 5.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8546
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11212
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6236
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.003009027081244e-4
allele num: 9970
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16014
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65474
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 866
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 9.8e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -1.713e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.27e0

FS
type: SiteQuality
SIO_000300: 4.617e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.2e-1

MQ
type: SiteQuality
SIO_000300: 5.868e1

DP
type: SiteQuality
SIO_000300: 1.760471e6

QD
type: SiteQuality
SIO_000300: 1.334e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.34e0

GenotypeQuality
all individuals: 36127
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 194
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variant carriers: 0

GenotypeQuality
all individuals: 350
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variant carriers: 0

GenotypeQuality
all individuals: 2176
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variant carriers: 0

GenotypeQuality
all individuals: 8566
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variant carriers: 3

GenotypeQuality
all individuals: 17
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 107
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
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GenotypeQuality
all individuals: 200
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GenotypeQuality
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GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1963
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GenotypeQuality
all individuals: 1431
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 661
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 850
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10042
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8574
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65712
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11280
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6286
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.86543962193757e-4
allele num: 16082
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.1e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.08e-1

FS
type: SiteQuality
SIO_000300: 3.49e0

VQSLOD
type: SiteQuality
SIO_000300: 3.3e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.046e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.458e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

QD
type: SiteQuality
SIO_000300: 1.471e1

DP
type: SiteQuality
SIO_000300: 1.769761e6

MQ
type: SiteQuality
SIO_000300: 5.948e1

GenotypeQuality
all individuals: 36201
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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bin: 6.75e1
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GenotypeQuality
all individuals: 2167
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10072
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16138
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8582
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6334
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11336
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.51804960986125e-5
allele num: 65874
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.5e-1

FS
type: SiteQuality
SIO_000300: 8.93e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

QD
type: SiteQuality
SIO_000300: 7.16e0

MQRankSum
type: SiteQuality
SIO_000300: 3.17e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.528e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.56e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.22e0

MQ
type: SiteQuality
SIO_000300: 5.962e1

DP
type: SiteQuality
SIO_000300: 1.774053e6

GenotypeQuality
all individuals: 26
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 138
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 846
bin: 9.25e1
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GenotypeQuality
all individuals: 8575
bin: 9.75e1
variant carriers: 29

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 28
allele frequency: 4.251700680272109e-4
allele num: 65856
num of homozygotes: 1

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.578781180928323e-4
allele num: 6334
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8582
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.816787162757891e-5
allele num: 11342
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.926543577526305e-5
allele num: 10074
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.197322756569162e-5
allele num: 16136
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.771909e6

MQRankSum
type: SiteQuality
SIO_000300: 2.09e-1

MQ
type: SiteQuality
SIO_000300: 5.955e1

QD
type: SiteQuality
SIO_000300: 1.07e1

FS
type: SiteQuality
SIO_000300: 5.34e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.29e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.53e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 5.54e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.6e-2

VQSLOD
type: SiteQuality
SIO_000300: 3.01e0

GenotypeQuality
all individuals: 180
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1421
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 27
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GenotypeQuality
all individuals: 452
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variant carriers: 0

GenotypeQuality
all individuals: 11
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GenotypeQuality
all individuals: 629
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 8558
bin: 9.75e1
variant carriers: 2

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10060
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.518879674352198e-5
allele num: 65838
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.165501165501166e-4
allele num: 8580
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11342
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16112
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6332
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.494e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.09e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.72e-1

DP
type: SiteQuality
SIO_000300: 1.769015e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -1.966e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 2.727e1

FS
type: SiteQuality
SIO_000300: 1.544e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.1e-2

GenotypeQuality
all individuals: 5461
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 8577
bin: 9.75e1
variant carriers: 24

European (Non-Finnish)
type: Population
allele count: 19
allele frequency: 2.887274716591192e-4
allele num: 65806
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16100
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10052
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8578
num of homozygotes: 0

Latino
type: Population
allele count: 5
allele frequency: 4.409171075837742e-4
allele num: 11340
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6336
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.96e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -4.37e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.67e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.8e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.17e-1

FS
type: SiteQuality
SIO_000300: 5.38e-1

DP
type: SiteQuality
SIO_000300: 1.768118e6

VQSLOD
type: SiteQuality
SIO_000300: 3.16e0

QD
type: SiteQuality
SIO_000300: 1.186e1

GenotypeQuality
all individuals: 846
bin: 9.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 697
bin: 3.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65806
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8578
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6336
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.211180124223603e-5
allele num: 16100
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10052
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11340
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.37e-1

FS
type: SiteQuality
SIO_000300: 5.38e-1

QD
type: SiteQuality
SIO_000300: 1.186e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.8e-2

DP
type: SiteQuality
SIO_000300: 1.768118e6

MQ
type: SiteQuality
SIO_000300: 5.96e1

VQSLOD
type: SiteQuality
SIO_000300: 3.16e0

MQRankSum
type: SiteQuality
SIO_000300: 1.67e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.17e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

GenotypeQuality
all individuals: 4
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variant carriers: 0

GenotypeQuality
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variant carriers: 14

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 444
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GenotypeQuality
all individuals: 1414
bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

South Asian
type: Population
allele count: 6
allele frequency: 3.734594796464584e-4
allele num: 16066
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.334267040149393e-4
allele num: 8568
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10020
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11332
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 9.131864117861927e-5
allele num: 65704
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6326
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 7.24e-1

FS
type: SiteQuality
SIO_000300: 5.244e0

VQSLOD
type: SiteQuality
SIO_000300: 1.61e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.7e-1

MQ
type: SiteQuality
SIO_000300: 5.982e1

QD
type: SiteQuality
SIO_000300: 1.089e1

DP
type: SiteQuality
SIO_000300: 1.751664e6

MQRankSum
type: SiteQuality
SIO_000300: -2.35e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.72e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6248
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9910
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8530
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11264
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15998
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.530456075910621e-5
allele num: 65340
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 866
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.62e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.016e0

MQRankSum
type: SiteQuality
SIO_000300: -1.54e-1

VQSLOD
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.609e1

DP
type: SiteQuality
SIO_000300: 1.722474e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.9e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -1.385e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.530456075910621e-5
allele num: 65340
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6248
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15998
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 866
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8530
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9910
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11264
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.54e-1

DP
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VQSLOD
type: SiteQuality
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FS
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ReadPosRankSum
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ClippingRankSum
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QD
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MQ
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 2.9e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -1.385e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15994
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.590384674235701e-5
allele num: 65354
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9920
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11264
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 864
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6248
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FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.899e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.59e0

DP
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 2.8e-3

VQSLOD
type: SiteQuality
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QD
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ClippingRankSum
type: SiteQuality
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ReadPosRankSum
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GenotypeQuality
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variant carriers: 402

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 629

African
type: Population
allele count: 2144
allele frequency: 2.180191173479764e-1
allele num: 9834
num of homozygotes: 225

European (Finnish)
type: Population
allele count: 2594
allele frequency: 4.183870967741936e-1
allele num: 6200
num of homozygotes: 526

Other
type: Population
allele count: 316
allele frequency: 3.665893271461717e-1
allele num: 862
num of homozygotes: 55

East Asian
type: Population
allele count: 4957
allele frequency: 5.918099331423113e-1
allele num: 8376
num of homozygotes: 1444

South Asian
type: Population
allele count: 5807
allele frequency: 3.638471177944862e-1
allele num: 15960
num of homozygotes: 1041

Latino
type: Population
allele count: 5598
allele frequency: 5.067897881586094e-1
allele num: 11046
num of homozygotes: 1393

European (Non-Finnish)
type: Population
allele count: 26507
allele frequency: 4.089576647741299e-1
allele num: 64816
num of homozygotes: 5347

FS
type: SiteQuality
SIO_000300: 6.36e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.82e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 1.16e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.74e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.85e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.93e-1

QD
type: SiteQuality
SIO_000300: 1.93e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 6.7e-2

DP
type: SiteQuality
SIO_000300: 2.051847e6

GenotypeQuality
all individuals: 224
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 884
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2005
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2753
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
all individuals: 34396
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 955
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 167
bin: 7.5e0
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GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
all individuals: 550
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 901
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 528
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10464
bin: 6.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 862
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 9.053050878145935e-5
allele num: 11046
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.879699248120301e-4
allele num: 15960
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8376
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6200
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9834
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64816
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.93e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.74e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.82e-2

FS
type: SiteQuality
SIO_000300: 6.36e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.16e-1

DP
type: SiteQuality
SIO_000300: 2.051847e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 6.7e-2

QD
type: SiteQuality
SIO_000300: 1.93e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.85e-1

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1139
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variant carriers: 0

GenotypeQuality
all individuals: 25494
bin: 6.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10610
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.168969451134491e-5
allele num: 63112
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 832
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15544
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8112
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9594
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5814
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 7.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.117e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.7e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.07e-1

MQ
type: SiteQuality
SIO_000300: 5.943e1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.98e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.71e-1

FS
type: SiteQuality
SIO_000300: 2.398e0

VQSLOD
type: SiteQuality
SIO_000300: -7.168e-1

DP
type: SiteQuality
SIO_000300: 1.57346e6

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 669
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variant carriers: 0

GenotypeQuality
all individuals: 4856
bin: 2.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9110
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 776
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.004621257785815e-4
allele num: 9954
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15124
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7712
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5352
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 60656
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.295e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.64e0

MQRankSum
type: SiteQuality
SIO_000300: 5.89e-1

MQ
type: SiteQuality
SIO_000300: 5.816e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -3.41e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.79e-1

FS
type: SiteQuality
SIO_000300: 2.521e0

DP
type: SiteQuality
SIO_000300: 1.355413e6

QD
type: SiteQuality
SIO_000300: 1.081e1

GenotypeQuality
all individuals: 1091
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 231
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
all individuals: 1003
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variant carriers: 0

GenotypeQuality
all individuals: 2049
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GenotypeQuality
all individuals: 407
bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7526
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8926
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9650
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.681746325384279e-5
allele num: 59462
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5112
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14924
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 750
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 6.32e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.52e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.037e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.58e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.13e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.782e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.1e-3

DP
type: SiteQuality
SIO_000300: 1.333402e6

GenotypeQuality
all individuals: 14269
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 45
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 21032
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variant carriers: 1

GenotypeQuality
all individuals: 60
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.49947518368571e-5
allele num: 66690
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.512e0

VQSLOD
type: SiteQuality
SIO_000300: 2.55e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQ
type: SiteQuality
SIO_000300: 5.987e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.26e-1

MQRankSum
type: SiteQuality
SIO_000300: -6.15e-1

DP
type: SiteQuality
SIO_000300: 2.910046e6

QD
type: SiteQuality
SIO_000300: 1.504e1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.52e-1

GenotypeQuality
all individuals: 6433
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 73
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 3
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GenotypeQuality
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variant carriers: 16

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66688
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 16
allele frequency: 1.848856020337416e-3
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.052e1

MQRankSum
type: SiteQuality
SIO_000300: 3.56e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.515e0

FS
type: SiteQuality
SIO_000300: 2.719e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.31e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 1.84e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.11e0

DP
type: SiteQuality
SIO_000300: 2.910411e6

MQ
type: SiteQuality
SIO_000300: 5.968e1

GenotypeQuality
all individuals: 14435
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
all individuals: 126
bin: 5.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499520153550864e-5
allele num: 66688
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

DP
type: SiteQuality
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QD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.973e1

MQRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 7.235e0

VQSLOD
type: SiteQuality
SIO_000300: -8.169999999999999e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -2.306e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.89e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.23e-1

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 3728
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499385252046661e-5
allele num: 66694
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.55e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.586e0

MQRankSum
type: SiteQuality
SIO_000300: 1.72e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.8e-1

MQ
type: SiteQuality
SIO_000300: 5.973e1

QD
type: SiteQuality
SIO_000300: 1.297e1

DP
type: SiteQuality
SIO_000300: 2.908709e6

VQSLOD
type: SiteQuality
SIO_000300: 1.0e0

GenotypeQuality
all individuals: 21012
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variant carriers: 14

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
all individuals: 4488
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 5.997720866070893e-5
allele num: 66692
num of homozygotes: 0

South Asian
type: Population
allele count: 7
allele frequency: 4.241396025206011e-4
allele num: 16504
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 2.591121091725686e-4
allele num: 11578
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.33e-1

FS
type: SiteQuality
SIO_000300: 1.893e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.02e-1

MQ
type: SiteQuality
SIO_000300: 5.973e1

VQSLOD
type: SiteQuality
SIO_000300: 2.15e0

MQRankSum
type: SiteQuality
SIO_000300: 6.27e-1

QD
type: SiteQuality
SIO_000300: 1.179e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.635e0

DP
type: SiteQuality
SIO_000300: 2.909405e6

GenotypeQuality
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variant carriers: 2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 4.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.49934029027228e-5
allele num: 66696
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.615384615384615e-5
allele num: 10400
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.983e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.15e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.5e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.75e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 6.73e0

QD
type: SiteQuality
SIO_000300: 1.346e1

MQRankSum
type: SiteQuality
SIO_000300: 1.39e0

FS
type: SiteQuality
SIO_000300: 6.228e0

DP
type: SiteQuality
SIO_000300: 2.908064e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 20998
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variant carriers: 5

GenotypeQuality
all individuals: 14892
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66696
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 5
allele frequency: 5.777675063554426e-4
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.83e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.53e0

QD
type: SiteQuality
SIO_000300: 1.061e1

VQSLOD
type: SiteQuality
SIO_000300: 1.47e0

MQRankSum
type: SiteQuality
SIO_000300: 1.25e-1

FS
type: SiteQuality
SIO_000300: 1.826e0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.632e0

MQ
type: SiteQuality
SIO_000300: 5.966e1

DP
type: SiteQuality
SIO_000300: 2.908208e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 4913
bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66702
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.609840476648087e-5
allele num: 10406
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.207e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.423e0

VQSLOD
type: SiteQuality
SIO_000300: -2.215e-1

DP
type: SiteQuality
SIO_000300: 2.907851e6

FS
type: SiteQuality
SIO_000300: 2.69e0

MQ
type: SiteQuality
SIO_000300: 5.977e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.1e0

MQRankSum
type: SiteQuality
SIO_000300: 8.699999999999999e-2

QD
type: SiteQuality
SIO_000300: 1.348e1

GenotypeQuality
all individuals: 4875
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variant carriers: 0

GenotypeQuality
all individuals: 4
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2648

Other
type: Population
allele count: 31
allele frequency: 3.41409691629956e-2
allele num: 908
num of homozygotes: 3

European (Non-Finnish)
type: Population
allele count: 2055
allele frequency: 3.080405324379422e-2
allele num: 66712
num of homozygotes: 41

African
type: Population
allele count: 46
allele frequency: 4.420526619258121e-3
allele num: 10406
num of homozygotes: 1

European (Finnish)
type: Population
allele count: 191
allele frequency: 2.887813728454793e-2
allele num: 6614
num of homozygotes: 6

Latino
type: Population
allele count: 208
allele frequency: 1.796510623596476e-2
allele num: 11578
num of homozygotes: 3

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 174
allele frequency: 1.053906723198062e-2
allele num: 16510
num of homozygotes: 2

BaseQRankSum
type: SiteQuality
SIO_000300: -4.413e0

MQ
type: SiteQuality
SIO_000300: 5.964e1

QD
type: SiteQuality
SIO_000300: 1.251e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.13e-2

FS
type: SiteQuality
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VQSLOD
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: 1.73e-1

DP
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SIO_000300: 3.008286e6

ClippingRankSum
type: SiteQuality
SIO_000300: -4.78e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.94e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056935190793458e-5
allele num: 16510
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66714
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -7.7e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.2e-1

DP
type: SiteQuality
SIO_000300: 2.489146e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.671e0

FS
type: SiteQuality
SIO_000300: 3.391e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.487e0

QD
type: SiteQuality
SIO_000300: 1.374e1

VQSLOD
type: SiteQuality
SIO_000300: 1.12e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.637070305752289e-5
allele num: 11578
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
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European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66716
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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VQSLOD
type: SiteQuality
SIO_000300: 1.01e0

ReadPosRankSum
type: SiteQuality
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InbreedingCoeff
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BaseQRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: 4.84e-1

FS
type: SiteQuality
SIO_000300: 4.79e0

DP
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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MQ
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.362e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498890820792613e-5
allele num: 66716
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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DP
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SIO_000300: 2.489253e6

InbreedingCoeff
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SIO_000300: 0.0e0

ClippingRankSum
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FS
type: SiteQuality
SIO_000300: 1.4495e1

ReadPosRankSum
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SIO_000300: 8.3e-1

MQ
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SIO_000300: 5.958e1

VQSLOD
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SIO_000300: -1.97e0

MQRankSum
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SIO_000300: 1.11e0

BaseQRankSum
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SIO_000300: 1.82e0

QD
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SIO_000300: 1.276e1

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 9

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 7.68787238131847e-4
allele num: 10406
num of homozygotes: 0

Other
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 1.498800959232614e-5
allele num: 66720
num of homozygotes: 0

East Asian
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InbreedingCoeff
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FS
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VQSLOD
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MQRankSum
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BaseQRankSum
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MQ
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ReadPosRankSum
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DP
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QD
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ClippingRankSum
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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South Asian
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allele num: 16510
num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

VQSLOD
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MQRankSum
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ClippingRankSum
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FS
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ReadPosRankSum
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BaseQRankSum
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QD
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MQ
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DP
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SIO_000300: 2.487982e6

InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

South Asian
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allele num: 16510
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 0
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num of homozygotes: 0

FS
type: SiteQuality
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BaseQRankSum
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VQSLOD
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DP
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InbreedingCoeff
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QD
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MQRankSum
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MQ
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ClippingRankSum
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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allele num: 908
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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African
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num of homozygotes: 0

Latino
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allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
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allele num: 66726
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South Asian
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DP
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InbreedingCoeff
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MQRankSum
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QD
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ClippingRankSum
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ReadPosRankSum
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BaseQRankSum
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VQSLOD
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FS
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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European (Non-Finnish)
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Latino
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East Asian
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European (Finnish)
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South Asian
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African
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DP
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ClippingRankSum
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MQ
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ReadPosRankSum
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VQSLOD
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InbreedingCoeff
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FS
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MQRankSum
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QD
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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Other
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European (Non-Finnish)
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European (Finnish)
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South Asian
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Latino
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African
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BaseQRankSum
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InbreedingCoeff
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ClippingRankSum
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DP
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MQRankSum
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MQ
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QD
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VQSLOD
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FS
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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European (Non-Finnish)
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African
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Other
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East Asian
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Latino
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European (Finnish)
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VQSLOD
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InbreedingCoeff
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ClippingRankSum
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MQ
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DP
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BaseQRankSum
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MQRankSum
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FS
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ReadPosRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056935190793458e-5
allele num: 16510
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66722
num of homozygotes: 0

MQRankSum
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SIO_000300: -1.222e0

VQSLOD
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SIO_000300: -2.589e-1

FS
type: SiteQuality
SIO_000300: 2.409e0

ClippingRankSum
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SIO_000300: 1.32e0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.67e-1

InbreedingCoeff
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SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.189e0

QD
type: SiteQuality
SIO_000300: 1.114e1

DP
type: SiteQuality
SIO_000300: 2.485637e6

MQ
type: SiteQuality
SIO_000300: 5.967e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.25e1
variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66652
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
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allele count: 1
allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16358
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.92e0

ClippingRankSum
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SIO_000300: -1.363e0

ReadPosRankSum
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SIO_000300: 2.44e0

VQSLOD
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QD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.984e1

DP
type: SiteQuality
SIO_000300: 2.481722e6

FS
type: SiteQuality
SIO_000300: 2.215e0

MQRankSum
type: SiteQuality
SIO_000300: -1.623e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16162
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.611687812379854e-5
allele num: 10404
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66586
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.971e1

DP
type: SiteQuality
SIO_000300: 2.475465e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.73e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.47e0

FS
type: SiteQuality
SIO_000300: 6.484e0

InbreedingCoeff
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SIO_000300: -1.0e-4

QD
type: SiteQuality
SIO_000300: 1.307e1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.4e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.95e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.83e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.003724618526973e-5
allele num: 66584
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.856665428889714e-4
allele num: 16158
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.335e1

MQ
type: SiteQuality
SIO_000300: 5.977e1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.26e0

VQSLOD
type: SiteQuality
SIO_000300: 4.9e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.29e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.9e-2

DP
type: SiteQuality
SIO_000300: 2.474904e6

ClippingRankSum
type: SiteQuality
SIO_000300: -6.55e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 15858
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.504619180885318e-5
allele num: 66462
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.891e1

ClippingRankSum
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SIO_000300: -1.308e0

ReadPosRankSum
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SIO_000300: 1.63e0

VQSLOD
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SIO_000300: -1.19e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
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SIO_000300: -1.0e-4

DP
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MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
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MQRankSum
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SIO_000300: -7.57e-1

GenotypeQuality
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variant carriers: 17

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.018295618680789e-5
allele num: 66464
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15852
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African
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allele count: 13
allele frequency: 1.25e-3
allele num: 10400
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.45e-1

InbreedingCoeff
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MQ
type: SiteQuality
SIO_000300: 5.968e1

BaseQRankSum
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ClippingRankSum
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FS
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QD
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ReadPosRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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DP
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SIO_000300: 2.464947e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.75e1
variant carriers: 0

European (Non-Finnish)
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allele count: 13
allele frequency: 1.958834342886418e-4
allele num: 66366
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele count: 1
allele frequency: 1.511944360447536e-4
allele num: 6614
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.454339e6

MQRankSum
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InbreedingCoeff
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QD
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MQ
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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FS
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BaseQRankSum
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SIO_000300: -1.715e0

VQSLOD
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SIO_000300: 2.13e0

ReadPosRankSum
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SIO_000300: 4.86e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.509160604871571e-5
allele num: 66262
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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Other
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.711e0

FS
type: SiteQuality
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MQRankSum
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VQSLOD
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BaseQRankSum
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InbreedingCoeff
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ReadPosRankSum
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QD
type: SiteQuality
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DP
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 234
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 83
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 229
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4995
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4642
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2903
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2201
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3886
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

African
type: Population
allele count: 43
allele frequency: 4.142581888246628e-3
allele num: 10380
num of homozygotes: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14964
num of homozygotes: 0

Latino
type: Population
allele count: 4
allele frequency: 3.459609064175748e-4
allele num: 11562
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.022974607013301e-5
allele num: 66160
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.957e1

FS
type: SiteQuality
SIO_000300: 1.137e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.12e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.21e-2

DP
type: SiteQuality
SIO_000300: 2.438337e6

MQRankSum
type: SiteQuality
SIO_000300: 2.89e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.89e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.34e0

QD
type: SiteQuality
SIO_000300: 1.351e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.55e-1

GenotypeQuality
all individuals: 55
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6344
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2900
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 263
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 93
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 125
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 268
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13118
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19371
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2203
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3886
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5001
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2162
bin: 2.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10376
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14778
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.513317191283293e-5
allele num: 66080
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -8.58e-1

MQ
type: SiteQuality
SIO_000300: 5.937e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.623e0

VQSLOD
type: SiteQuality
SIO_000300: 5.09e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.3e-1

FS
type: SiteQuality
SIO_000300: 5.43e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.6e-3

QD
type: SiteQuality
SIO_000300: 1.35e1

DP
type: SiteQuality
SIO_000300: 2.426987e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.18e0

GenotypeQuality
all individuals: 2203
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19370
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 171
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 260
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2900
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5001
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2172
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4641
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3886
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13225
bin: 6.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10376
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66072
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.650519031141868e-5
allele num: 11560
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14764
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 7.03e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.19e-1

QD
type: SiteQuality
SIO_000300: 1.403e1

MQ
type: SiteQuality
SIO_000300: 5.98e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.1e-3

FS
type: SiteQuality
SIO_000300: 1.203e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.69e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.606e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.72e0

DP
type: SiteQuality
SIO_000300: 2.426558e6

GenotypeQuality
all individuals: 308
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4636
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2866
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 19362
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 47
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 172
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6242
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2730
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 331
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3884
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4991
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2201
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12656
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10366
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14238
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.517773123273533e-5
allele num: 65886
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.411599e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.21e0

VQSLOD
type: SiteQuality
SIO_000300: 9.2e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -4.961e0

MQRankSum
type: SiteQuality
SIO_000300: 1.35e0

FS
type: SiteQuality
SIO_000300: 5.3e-1

MQ
type: SiteQuality
SIO_000300: 5.972e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.193e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.5e-3

QD
type: SiteQuality
SIO_000300: 1.276e1

GenotypeQuality
all individuals: 2865
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4992
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2901
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 322
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 77
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4636
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6219
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19360
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3884
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12464
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 189
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2202
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 4.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.648784253184099e-5
allele num: 10364
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14110
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65846
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.99e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.45e0

DP
type: SiteQuality
SIO_000300: 2.407935e6

MQRankSum
type: SiteQuality
SIO_000300: -3.3e-2

MQ
type: SiteQuality
SIO_000300: 5.947e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.741e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 2.58e-1

QD
type: SiteQuality
SIO_000300: 1.395e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.16e0