1-19464704-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19464704
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 19464704
    reference: chr 1
allele count: 1
allele frequency: 8.903609523300746e-6
allele num: 112314
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000395313
  ensembl transcript: ENST00000425413
  gene symbol: UBR4
  hgvsc: ENST00000425413.1:c.1556-29T>C
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000404897
  ensembl transcript: ENST00000417040
  gene symbol: UBR4
  hgvsc: ENST00000417040.1:c.4790-29T>C
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364416
  ensembl transcript: ENST00000375267
  gene symbol: UBR4
  hgvsc: ENST00000375267.2:c.8732-29T>C
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364403
  ensembl transcript: ENST00000375254
  gene symbol: UBR4
  hgvsc: ENST00000375254.3:c.8732-29T>C
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364365
  ensembl transcript: ENST00000375217
  gene symbol: UBR4
  hgvsc: ENST00000375217.2:c.8711-29T>C
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364374
  ensembl transcript: ENST00000375226
  gene symbol: UBR4
  hgvsc: ENST00000375226.2:c.8660-29T>C
  variant of: http://identifiers.org/hgnc/30313
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1497
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3163
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1901
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11989
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2915
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5199
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 453
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2090
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7885
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11486
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 723
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7775
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1187
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1204
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 480
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4865
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6843
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 221
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1555
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2919
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 515
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 237
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 448
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 549
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 248
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4013
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15121
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: Latino
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
reference allele: A
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD

1-19464705-T-TCAACTCC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19464705
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 19464712
    reference: chr 1
allele count: 15
allele frequency: 1.335850669706469e-4
allele num: 112288
alternate allele: TCAACTCC
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364365
  ensembl transcript: ENST00000375217
  gene symbol: UBR4
  hgvsc: ENST00000375217.2:c.8711-37_8711-31dupGGAGTTG
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000404897
  ensembl transcript: ENST00000417040
  gene symbol: UBR4
  hgvsc: ENST00000417040.1:c.4790-37_4790-31dupGGAGTTG
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364403
  ensembl transcript: ENST00000375254
  gene symbol: UBR4
  hgvsc: ENST00000375254.3:c.8732-37_8732-31dupGGAGTTG
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000395313
  ensembl transcript: ENST00000425413
  gene symbol: UBR4
  hgvsc: ENST00000425413.1:c.1556-37_1556-31dupGGAGTTG
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364374
  ensembl transcript: ENST00000375226
  gene symbol: UBR4
  hgvsc: ENST00000375226.2:c.8660-37_8660-31dupGGAGTTG
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364416
  ensembl transcript: ENST00000375267
  gene symbol: UBR4
  hgvsc: ENST00000375267.2:c.8732-37_8732-31dupGGAGTTG
  variant of: http://identifiers.org/hgnc/30313
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1503
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12003
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3163
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1202
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7881
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 723
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7787
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5198
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2921
  bin: 7.5e0
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 2080
  bin: 1.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1186
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11468
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1901
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 480
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 241
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 194
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 513
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1565
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6843
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 250
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 552
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.75e1
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genotype quality: GenotypeQuality
  all individuals: 671
  bin: 3.25e1
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genotype quality: GenotypeQuality
  all individuals: 112
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genotype quality: GenotypeQuality
  all individuals: 2962
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genotype quality: GenotypeQuality
  all individuals: 4010
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 393
  bin: 1.75e1
  variant carriers: 1
num of homozygotes: 1
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Other
reference allele: T
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS

1-19464709-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19464709
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 19464709
    reference: chr 1
allele count: 1
allele frequency: 8.929528163731828e-6
allele num: 111988
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364416
  ensembl transcript: ENST00000375267
  gene symbol: UBR4
  hgvsc: ENST00000375267.2:c.8732-34G>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364365
  ensembl transcript: ENST00000375217
  gene symbol: UBR4
  hgvsc: ENST00000375217.2:c.8711-34G>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000395313
  ensembl transcript: ENST00000425413
  gene symbol: UBR4
  hgvsc: ENST00000425413.1:c.1556-34G>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364374
  ensembl transcript: ENST00000375226
  gene symbol: UBR4
  hgvsc: ENST00000375226.2:c.8660-34G>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000404897
  ensembl transcript: ENST00000417040
  gene symbol: UBR4
  hgvsc: ENST00000417040.1:c.4790-34G>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364403
  ensembl transcript: ENST00000375254
  gene symbol: UBR4
  hgvsc: ENST00000375254.3:c.8732-34G>A
  variant of: http://identifiers.org/hgnc/30313
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1436
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5199
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 480
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 723
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1623
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1984
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7718
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1899
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7869
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  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 63
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1187
  bin: 5.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 446
  bin: 1.75e1
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genotype quality: GenotypeQuality
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  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 12165
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  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 716
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: Latino
population: East Asian
reference allele: C
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ

1-19464711-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19464711
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 19464711
    reference: chr 1
allele count: 10
allele frequency: 8.939905952189383e-5
allele num: 111858
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000395313
  ensembl transcript: ENST00000425413
  gene symbol: UBR4
  hgvsc: ENST00000425413.1:c.1556-36G>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364365
  ensembl transcript: ENST00000375217
  gene symbol: UBR4
  hgvsc: ENST00000375217.2:c.8711-36G>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364374
  ensembl transcript: ENST00000375226
  gene symbol: UBR4
  hgvsc: ENST00000375226.2:c.8660-36G>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364416
  ensembl transcript: ENST00000375267
  gene symbol: UBR4
  hgvsc: ENST00000375267.2:c.8732-36G>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000404897
  ensembl transcript: ENST00000417040
  gene symbol: UBR4
  hgvsc: ENST00000417040.1:c.4790-36G>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364403
  ensembl transcript: ENST00000375254
  gene symbol: UBR4
  hgvsc: ENST00000375254.3:c.8732-36G>A
  variant of: http://identifiers.org/hgnc/30313
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7866
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 723
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1602
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1188
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
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  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2949
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3164
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1938
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 480
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11361
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
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  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 63
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1900
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 453
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1745
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 9.75e1
  variant carriers: 10
genotype quality: GenotypeQuality
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  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 384
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 503
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2867
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2608
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 634
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 138
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 538
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: Other
population: African
population: East Asian
population: South Asian
reference allele: C
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: BaseQRankSum

1-19464719-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19464719
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 19464719
    reference: chr 1
allele count: 7
allele frequency: 6.284903661405304e-5
allele num: 111378
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364374
  ensembl transcript: ENST00000375226
  gene symbol: UBR4
  hgvsc: ENST00000375226.2:c.8660-44T>C
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364416
  ensembl transcript: ENST00000375267
  gene symbol: UBR4
  hgvsc: ENST00000375267.2:c.8732-44T>C
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364365
  ensembl transcript: ENST00000375217
  gene symbol: UBR4
  hgvsc: ENST00000375217.2:c.8711-44T>C
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000395313
  ensembl transcript: ENST00000425413
  gene symbol: UBR4
  hgvsc: ENST00000425413.1:c.1556-44T>C
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364403
  ensembl transcript: ENST00000375254
  gene symbol: UBR4
  hgvsc: ENST00000375254.3:c.8732-44T>C
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000404897
  ensembl transcript: ENST00000417040
  gene symbol: UBR4
  hgvsc: ENST00000417040.1:c.4790-44T>C
  variant of: http://identifiers.org/hgnc/30313
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1187
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11429
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7708
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1969
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3124
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1902
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1717
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11257
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7857
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3162
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1742
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 724
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5201
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 480
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 472
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 439
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4840
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6741
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12175
  bin: 9.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 3999
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1797
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2340
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2868
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 806
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13797
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 189
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 575
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: African
population: Other
population: Latino
population: European (Non-Finnish)
population: East Asian
reference allele: A
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff

1-19464722-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19464722
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 19464722
    reference: chr 1
allele count: 2
allele frequency: 1.797914419273643e-5
allele num: 111240
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364374
  ensembl transcript: ENST00000375226
  gene symbol: UBR4
  hgvsc: ENST00000375226.2:c.8660-47T>C
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000404897
  ensembl transcript: ENST00000417040
  gene symbol: UBR4
  hgvsc: ENST00000417040.1:c.4790-47T>C
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364403
  ensembl transcript: ENST00000375254
  gene symbol: UBR4
  hgvsc: ENST00000375254.3:c.8732-47T>C
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364365
  ensembl transcript: ENST00000375217
  gene symbol: UBR4
  hgvsc: ENST00000375217.2:c.8711-47T>C
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364416
  ensembl transcript: ENST00000375267
  gene symbol: UBR4
  hgvsc: ENST00000375267.2:c.8732-47T>C
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000395313
  ensembl transcript: ENST00000425413
  gene symbol: UBR4
  hgvsc: ENST00000425413.1:c.1556-47T>C
  variant of: http://identifiers.org/hgnc/30313
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5199
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 723
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7863
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1953
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 480
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1187
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11243
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3167
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11259
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7891
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1663
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3170
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1753
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1901
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13276
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1775
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 219
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 810
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6702
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2343
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 862
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 187
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 509
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12174
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1947
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 852
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2870
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: A
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: ClippingRankSum

1-19465528-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19465528
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 19465528
    reference: chr 1
allele count: 1
allele frequency: 8.340700952508049e-6
allele num: 119894
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364416
  ensembl transcript: ENST00000375267
  gene symbol: UBR4
  hgvsc: ENST00000375267.2:c.8731+49C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364403
  ensembl transcript: ENST00000375254
  gene symbol: UBR4
  hgvsc: ENST00000375254.3:c.8731+49C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000404897
  ensembl transcript: ENST00000417040
  gene symbol: UBR4
  hgvsc: ENST00000417040.1:c.4789+49C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364374
  ensembl transcript: ENST00000375226
  gene symbol: UBR4
  hgvsc: ENST00000375226.2:c.8659+49C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364365
  ensembl transcript: ENST00000375217
  gene symbol: UBR4
  hgvsc: ENST00000375217.2:c.8710+49C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000395313
  ensembl transcript: ENST00000425413
  gene symbol: UBR4
  hgvsc: ENST00000425413.1:c.1555+49C>T
  variant of: http://identifiers.org/hgnc/30313
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1414
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2899
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6589
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1788
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9511
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1962
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3919
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11396
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3664
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4402
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 846
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9811
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 640
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6323
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 438
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8007
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4107
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2612
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 673
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 696
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: South Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
reference allele: G
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: MQ

1-19465533-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19465533
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 19465533
    reference: chr 1
allele count: 1
allele frequency: 8.329723786359244e-6
allele num: 120052
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364403
  ensembl transcript: ENST00000375254
  gene symbol: UBR4
  hgvsc: ENST00000375254.3:c.8731+44G>C
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364374
  ensembl transcript: ENST00000375226
  gene symbol: UBR4
  hgvsc: ENST00000375226.2:c.8659+44G>C
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000404897
  ensembl transcript: ENST00000417040
  gene symbol: UBR4
  hgvsc: ENST00000417040.1:c.4789+44G>C
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364365
  ensembl transcript: ENST00000375217
  gene symbol: UBR4
  hgvsc: ENST00000375217.2:c.8710+44G>C
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000395313
  ensembl transcript: ENST00000425413
  gene symbol: UBR4
  hgvsc: ENST00000425413.1:c.1555+44G>C
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364416
  ensembl transcript: ENST00000375267
  gene symbol: UBR4
  hgvsc: ENST00000375267.2:c.8731+44G>C
  variant of: http://identifiers.org/hgnc/30313
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3918
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9590
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6591
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 846
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9814
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1379
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4522
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3211
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3664
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11405
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 600
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 120
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6335
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 668
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 423
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 328
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3839
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8085
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: C
site quality: DP
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/1-19465534-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19465534
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 19465534
    reference: chr 1
allele count: 2
allele frequency: 1.666555562962469e-5
allele num: 120008
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364416
  ensembl transcript: ENST00000375267
  gene symbol: UBR4
  hgvsc: ENST00000375267.2:c.8731+43T>G
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000404897
  ensembl transcript: ENST00000417040
  gene symbol: UBR4
  hgvsc: ENST00000417040.1:c.4789+43T>G
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364374
  ensembl transcript: ENST00000375226
  gene symbol: UBR4
  hgvsc: ENST00000375226.2:c.8659+43T>G
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000395313
  ensembl transcript: ENST00000425413
  gene symbol: UBR4
  hgvsc: ENST00000425413.1:c.1555+43T>G
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364403
  ensembl transcript: ENST00000375254
  gene symbol: UBR4
  hgvsc: ENST00000375254.3:c.8731+43T>G
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364365
  ensembl transcript: ENST00000375217
  gene symbol: UBR4
  hgvsc: ENST00000375217.2:c.8710+43T>G
  variant of: http://identifiers.org/hgnc/30313
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.90to99.95
genotype depth: GenotypeDepth
  all individuals: 9607
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4555
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 845
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1788
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3665
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 520
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3917
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 9812
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6594
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1381
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1361
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11405
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3292
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11436
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 720
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 656
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2619
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5500
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 598
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 122
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8068
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 487
  bin: 4.75e1
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genotype quality: GenotypeQuality
  all individuals: 304
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 2.5e0
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genotype quality: GenotypeQuality
  all individuals: 406
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
population: Latino
reference allele: A
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum

1-19465542-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19465542
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 19465542
    reference: chr 1
allele count: 1
allele frequency: 8.319744417451495e-6
allele num: 120196
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000404897
  ensembl transcript: ENST00000417040
  gene symbol: UBR4
  hgvsc: ENST00000417040.1:c.4789+35G>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364403
  ensembl transcript: ENST00000375254
  gene symbol: UBR4
  hgvsc: ENST00000375254.3:c.8731+35G>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364365
  ensembl transcript: ENST00000375217
  gene symbol: UBR4
  hgvsc: ENST00000375217.2:c.8710+35G>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364374
  ensembl transcript: ENST00000375226
  gene symbol: UBR4
  hgvsc: ENST00000375226.2:c.8659+35G>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364416
  ensembl transcript: ENST00000375267
  gene symbol: UBR4
  hgvsc: ENST00000375267.2:c.8731+35G>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000395313
  ensembl transcript: ENST00000425413
  gene symbol: UBR4
  hgvsc: ENST00000425413.1:c.1555+35G>A
  variant of: http://identifiers.org/hgnc/30313
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 686
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9818
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1789
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3908
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4831
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6592
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1118
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3793
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 845
  bin: 6.25e1
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genotype depth: GenotypeDepth
  all individuals: 11420
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3666
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8240
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 134
  bin: 5.75e1
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genotype quality: GenotypeQuality
  all individuals: 24
  bin: 2.5e0
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genotype quality: GenotypeQuality
  all individuals: 207
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5520
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 691
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 2627
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 229
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genotype quality: GenotypeQuality
  all individuals: 455
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: Latino
population: European (Finnish)
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum

1-19465548-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19465548
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 19465548
    reference: chr 1
allele count: 38
allele frequency: 3.157772274759428e-4
allele num: 120338
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000395313
  ensembl transcript: ENST00000425413
  gene symbol: UBR4
  hgvsc: ENST00000425413.1:c.1555+29C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000404897
  ensembl transcript: ENST00000417040
  gene symbol: UBR4
  hgvsc: ENST00000417040.1:c.4789+29C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364374
  ensembl transcript: ENST00000375226
  gene symbol: UBR4
  hgvsc: ENST00000375226.2:c.8659+29C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364416
  ensembl transcript: ENST00000375267
  gene symbol: UBR4
  hgvsc: ENST00000375267.2:c.8731+29C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364403
  ensembl transcript: ENST00000375254
  gene symbol: UBR4
  hgvsc: ENST00000375254.3:c.8731+29C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364365
  ensembl transcript: ENST00000375217
  gene symbol: UBR4
  hgvsc: ENST00000375217.2:c.8710+29C>T
  variant of: http://identifiers.org/hgnc/30313
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1788
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 239
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11444
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3908
  bin: 9.75e1
  variant carriers: 35
genotype depth: GenotypeDepth
  all individuals: 9935
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9823
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genotype depth: GenotypeDepth
  all individuals: 467
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.25e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 14926
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 3931
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genotype quality: GenotypeQuality
  all individuals: 633
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Latino
population: Other
reference allele: G
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: BaseQRankSum

1-19465554-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19465554
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 19465554
    reference: chr 1
allele count: 3
allele frequency: 2.490742739484914e-5
allele num: 120446
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000404897
  ensembl transcript: ENST00000417040
  gene symbol: UBR4
  hgvsc: ENST00000417040.1:c.4789+23C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000395313
  ensembl transcript: ENST00000425413
  gene symbol: UBR4
  hgvsc: ENST00000425413.1:c.1555+23C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364365
  ensembl transcript: ENST00000375217
  gene symbol: UBR4
  hgvsc: ENST00000375217.2:c.8710+23C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364374
  ensembl transcript: ENST00000375226
  gene symbol: UBR4
  hgvsc: ENST00000375226.2:c.8659+23C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364403
  ensembl transcript: ENST00000375254
  gene symbol: UBR4
  hgvsc: ENST00000375254.3:c.8731+23C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364416
  ensembl transcript: ENST00000375267
  gene symbol: UBR4
  hgvsc: ENST00000375267.2:c.8731+23C>T
  variant of: http://identifiers.org/hgnc/30313
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10032
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3668
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3875
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  variant carriers: 2
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 435
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genotype depth: GenotypeDepth
  all individuals: 11479
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 5119
  bin: 2.75e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4131
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 133
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 304
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 236
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6431
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5568
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 573
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12792
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: South Asian
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
reference allele: G
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: FS

1-19465555-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19465555
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 19465555
    reference: chr 1
allele count: 366
allele frequency: 3.038807060659903e-3
allele num: 120442
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364416
  ensembl transcript: ENST00000375267
  gene symbol: UBR4
  hgvsc: ENST00000375267.2:c.8731+22C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364403
  ensembl transcript: ENST00000375254
  gene symbol: UBR4
  hgvsc: ENST00000375254.3:c.8731+22C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000395313
  ensembl transcript: ENST00000425413
  gene symbol: UBR4
  hgvsc: ENST00000425413.1:c.1555+22C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364365
  ensembl transcript: ENST00000375217
  gene symbol: UBR4
  hgvsc: ENST00000375217.2:c.8710+22C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364374
  ensembl transcript: ENST00000375226
  gene symbol: UBR4
  hgvsc: ENST00000375226.2:c.8659+22C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000404897
  ensembl transcript: ENST00000417040
  gene symbol: UBR4
  hgvsc: ENST00000417040.1:c.4789+22C>T
  variant of: http://identifiers.org/hgnc/30313
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 850
  bin: 6.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 1.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 491
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 5129
  bin: 2.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10039
  bin: 3.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 1789
  bin: 5.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 686
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 11481
  bin: 3.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 7.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 6599
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3977
  bin: 2.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 9.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3677
  bin: 5.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 9839
  bin: 4.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 3879
  bin: 9.75e1
  variant carriers: 263
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 8.25e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 5560
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 227
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6426
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3966
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 147
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 243
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12767
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 561
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 2
population: European (Non-Finnish)
population: Latino
population: East Asian
population: African
population: European (Finnish)
population: Other
population: South Asian
reference allele: G
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: DP

1-19465555-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19465555
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 19465555
    reference: chr 1
allele count: 1
allele frequency: 8.302751531857658e-6
allele num: 120442
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000395313
  ensembl transcript: ENST00000425413
  gene symbol: UBR4
  hgvsc: ENST00000425413.1:c.1555+22C>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364416
  ensembl transcript: ENST00000375267
  gene symbol: UBR4
  hgvsc: ENST00000375267.2:c.8731+22C>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364403
  ensembl transcript: ENST00000375254
  gene symbol: UBR4
  hgvsc: ENST00000375254.3:c.8731+22C>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364365
  ensembl transcript: ENST00000375217
  gene symbol: UBR4
  hgvsc: ENST00000375217.2:c.8710+22C>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000404897
  ensembl transcript: ENST00000417040
  gene symbol: UBR4
  hgvsc: ENST00000417040.1:c.4789+22C>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364374
  ensembl transcript: ENST00000375226
  gene symbol: UBR4
  hgvsc: ENST00000375226.2:c.8659+22C>A
  variant of: http://identifiers.org/hgnc/30313
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11481
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5129
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6599
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 686
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3977
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9839
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10039
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3879
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3677
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1789
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 491
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 850
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14966
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 227
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3966
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4130
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12767
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8411
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 561
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 289
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2642
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Latino
population: African
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: MQ

http://identifiers.org/exac.variant/1-19465556-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19465556
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 19465556
    reference: chr 1
allele count: 22
allele frequency: 1.836761955650548e-4
allele num: 119776
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364365
  ensembl transcript: ENST00000375217
  gene symbol: UBR4
  hgvsc: ENST00000375217.2:c.8710+21T>G
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364374
  ensembl transcript: ENST00000375226
  gene symbol: UBR4
  hgvsc: ENST00000375226.2:c.8659+21T>G
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000404897
  ensembl transcript: ENST00000417040
  gene symbol: UBR4
  hgvsc: ENST00000417040.1:c.4789+21T>G
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000395313
  ensembl transcript: ENST00000425413
  gene symbol: UBR4
  hgvsc: ENST00000425413.1:c.1555+21T>G
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364403
  ensembl transcript: ENST00000375254
  gene symbol: UBR4
  hgvsc: ENST00000375254.3:c.8731+21T>G
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364416
  ensembl transcript: ENST00000375267
  gene symbol: UBR4
  hgvsc: ENST00000375267.2:c.8731+21T>G
  variant of: http://identifiers.org/hgnc/30313
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.90to99.95
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3880
  bin: 9.75e1
  variant carriers: 36
genotype depth: GenotypeDepth
  all individuals: 10050
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5152
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1783
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9841
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6606
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11486
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3680
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 850
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3912
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 666
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 243
  bin: 2.5e0
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 2644
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3958
  bin: 7.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 265
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 583
  bin: 2.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 156
  bin: 4.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 252
  bin: 2.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 1.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 1.25e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 12666
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 155
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 176
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 305
  bin: 3.25e1
  variant carriers: 1
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: Other
population: European (Finnish)
population: South Asian
population: East Asian
reference allele: A
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP

1-19465559-CCCGCCATGGCACATTACCACTGTGCTCG-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19465559
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 19465531
    reference: chr 1
allele count: 1
allele frequency: 8.297515723792297e-6
allele num: 120518
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: coding_sequence_variant
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364374
  ensembl transcript: ENST00000375226
  gene symbol: UBR4
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: coding_sequence_variant
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000404897
  ensembl transcript: ENST00000417040
  gene symbol: UBR4
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: coding_sequence_variant
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000395313
  ensembl transcript: ENST00000425413
  gene symbol: UBR4
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: true
  consequence: splice_donor_variant
  consequence: coding_sequence_variant
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364403
  ensembl transcript: ENST00000375254
  gene symbol: UBR4
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: coding_sequence_variant
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364416
  ensembl transcript: ENST00000375267
  gene symbol: UBR4
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: coding_sequence_variant
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364365
  ensembl transcript: ENST00000375217
  gene symbol: UBR4
  variant of: http://identifiers.org/hgnc/30313
canonical: true
consequence: splice donor
filter: VQSRTrancheINDEL99.95to100.00
genotype depth: GenotypeDepth
  all individuals: 10286
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11577
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5361
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4047
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1794
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 854
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6620
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 552
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3682
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3498
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9887
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6525
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8568
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 537
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 231
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14505
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: East Asian
population: South Asian
reference allele: CCCGCCATGGCACATTACCACTGTGCTCG
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: QD

1-19465561-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19465561
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 19465561
    reference: chr 1
allele count: 9
allele frequency: 7.465038735256548e-5
allele num: 120562
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364416
  ensembl transcript: ENST00000375267
  gene symbol: UBR4
  hgvsc: ENST00000375267.2:c.8731+16G>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364365
  ensembl transcript: ENST00000375217
  gene symbol: UBR4
  hgvsc: ENST00000375217.2:c.8710+16G>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000404897
  ensembl transcript: ENST00000417040
  gene symbol: UBR4
  hgvsc: ENST00000417040.1:c.4789+16G>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364374
  ensembl transcript: ENST00000375226
  gene symbol: UBR4
  hgvsc: ENST00000375226.2:c.8659+16G>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000395313
  ensembl transcript: ENST00000425413
  gene symbol: UBR4
  hgvsc: ENST00000425413.1:c.1555+16G>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364403
  ensembl transcript: ENST00000375254
  gene symbol: UBR4
  hgvsc: ENST00000375254.3:c.8731+16G>A
  variant of: http://identifiers.org/hgnc/30313
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 854
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6622
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5382
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3498
  bin: 9.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 519
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10306
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1794
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11589
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4050
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3682
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9889
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5632
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6534
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13106
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 163
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4162
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 194
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2669
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 221
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: Other
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ

1-19465562-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19465562
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 19465562
    reference: chr 1
allele count: 808
allele frequency: 6.700389750393896e-3
allele num: 120590
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364403
  ensembl transcript: ENST00000375254
  gene symbol: UBR4
  hgvsc: ENST00000375254.3:c.8731+15C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364416
  ensembl transcript: ENST00000375267
  gene symbol: UBR4
  hgvsc: ENST00000375267.2:c.8731+15C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364374
  ensembl transcript: ENST00000375226
  gene symbol: UBR4
  hgvsc: ENST00000375226.2:c.8659+15C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364365
  ensembl transcript: ENST00000375217
  gene symbol: UBR4
  hgvsc: ENST00000375217.2:c.8710+15C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000404897
  ensembl transcript: ENST00000417040
  gene symbol: UBR4
  hgvsc: ENST00000417040.1:c.4789+15C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000395313
  ensembl transcript: ENST00000425413
  gene symbol: UBR4
  hgvsc: ENST00000425413.1:c.1555+15C>T
  variant of: http://identifiers.org/hgnc/30313
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9909
  bin: 4.25e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 3683
  bin: 5.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 1.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 858
  bin: 6.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 3497
  bin: 9.75e1
  variant carriers: 672
genotype depth: GenotypeDepth
  all individuals: 10336
  bin: 3.25e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5392
  bin: 2.75e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 4049
  bin: 2.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 11600
  bin: 3.75e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 1.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 9.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1795
  bin: 5.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 8.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 6633
  bin: 4.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 504
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 7.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 155
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2665
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 170
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14608
  bin: 9.75e1
  variant carriers: 799
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 477
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5624
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4160
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4017
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 6
population: East Asian
population: Latino
population: South Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: African
reference allele: G
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD

1-19465565-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19465565
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 19465565
    reference: chr 1
allele count: 359
allele frequency: 2.9745629298202e-3
allele num: 120690
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000395313
  ensembl transcript: ENST00000425413
  gene symbol: UBR4
  hgvsc: ENST00000425413.1:c.1555+12T>C
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000404897
  ensembl transcript: ENST00000417040
  gene symbol: UBR4
  hgvsc: ENST00000417040.1:c.4789+12T>C
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364374
  ensembl transcript: ENST00000375226
  gene symbol: UBR4
  hgvsc: ENST00000375226.2:c.8659+12T>C
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364365
  ensembl transcript: ENST00000375217
  gene symbol: UBR4
  hgvsc: ENST00000375217.2:c.8710+12T>C
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364403
  ensembl transcript: ENST00000375254
  gene symbol: UBR4
  hgvsc: ENST00000375254.3:c.8731+12T>C
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364416
  ensembl transcript: ENST00000375267
  gene symbol: UBR4
  hgvsc: ENST00000375267.2:c.8731+12T>C
  variant of: http://identifiers.org/hgnc/30313
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 7.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 8.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 3738
  bin: 5.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 11750
  bin: 3.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 1.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 10517
  bin: 3.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 5469
  bin: 2.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4122
  bin: 2.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 1.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 7.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 9.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 10031
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 6710
  bin: 4.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 1811
  bin: 5.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 870
  bin: 6.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 507
  bin: 6.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2876
  bin: 9.75e1
  variant carriers: 263
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4220
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5708
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6637
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14055
  bin: 9.75e1
  variant carriers: 359
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4090
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 149
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 2
population: South Asian
population: East Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: Other
population: African
reference allele: A
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum

1-19465572-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19465572
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 19465572
    reference: chr 1
allele count: 2
allele frequency: 1.655875875544369e-5
allele num: 120782
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364365
  ensembl transcript: ENST00000375217
  gene symbol: UBR4
  hgvsc: ENST00000375217.2:c.8710+5T>C
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364416
  ensembl transcript: ENST00000375267
  gene symbol: UBR4
  hgvsc: ENST00000375267.2:c.8731+5T>C
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364374
  ensembl transcript: ENST00000375226
  gene symbol: UBR4
  hgvsc: ENST00000375226.2:c.8659+5T>C
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364403
  ensembl transcript: ENST00000375254
  gene symbol: UBR4
  hgvsc: ENST00000375254.3:c.8731+5T>C
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000404897
  ensembl transcript: ENST00000417040
  gene symbol: UBR4
  hgvsc: ENST00000417040.1:c.4789+5T>C
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000395313
  ensembl transcript: ENST00000425413
  gene symbol: UBR4
  hgvsc: ENST00000425413.1:c.1555+5T>C
  variant of: http://identifiers.org/hgnc/30313
canonical: true
consequence: splice region
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 10081
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3745
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 508
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 870
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5555
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1817
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6738
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10600
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11817
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4109
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2641
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2716
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8750
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13656
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 137
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13804
  bin: 9.75e1
  variant carriers: 2
hgvs: c.8731+5T>C
num of homozygotes: 0
population: East Asian
population: Other
population: European (Finnish)
population: Latino
population: South Asian
population: African
population: European (Non-Finnish)
reference allele: A
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum

1-19465573-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19465573
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 19465573
    reference: chr 1
allele count: 1
allele frequency: 8.279653579294243e-6
allele num: 120778
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000404897
  ensembl transcript: ENST00000417040
  gene symbol: UBR4
  hgvsc: ENST00000417040.1:c.4789+4A>C
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000395313
  ensembl transcript: ENST00000425413
  gene symbol: UBR4
  hgvsc: ENST00000425413.1:c.1555+4A>C
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364416
  ensembl transcript: ENST00000375267
  gene symbol: UBR4
  hgvsc: ENST00000375267.2:c.8731+4A>C
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364403
  ensembl transcript: ENST00000375254
  gene symbol: UBR4
  hgvsc: ENST00000375254.3:c.8731+4A>C
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364365
  ensembl transcript: ENST00000375217
  gene symbol: UBR4
  hgvsc: ENST00000375217.2:c.8710+4A>C
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364374
  ensembl transcript: ENST00000375226
  gene symbol: UBR4
  hgvsc: ENST00000375226.2:c.8659+4A>C
  variant of: http://identifiers.org/hgnc/30313
canonical: true
consequence: splice region
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 6740
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1818
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5564
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 507
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11816
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4102
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3745
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10601
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10084
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2634
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 871
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 407
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8750
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 136
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2716
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6685
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13798
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
hgvs: c.8731+4A>C
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum

1-19465574-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19465574
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 19465574
    reference: chr 1
allele count: 1
allele frequency: 8.279105194310599e-6
allele num: 120786
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000395313
  ensembl transcript: ENST00000425413
  gene symbol: UBR4
  hgvsc: ENST00000425413.1:c.1555+3A>C
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364365
  ensembl transcript: ENST00000375217
  gene symbol: UBR4
  hgvsc: ENST00000375217.2:c.8710+3A>C
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000404897
  ensembl transcript: ENST00000417040
  gene symbol: UBR4
  hgvsc: ENST00000417040.1:c.4789+3A>C
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364403
  ensembl transcript: ENST00000375254
  gene symbol: UBR4
  hgvsc: ENST00000375254.3:c.8731+3A>C
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364416
  ensembl transcript: ENST00000375267
  gene symbol: UBR4
  hgvsc: ENST00000375267.2:c.8731+3A>C
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364374
  ensembl transcript: ENST00000375226
  gene symbol: UBR4
  hgvsc: ENST00000375226.2:c.8659+3A>C
  variant of: http://identifiers.org/hgnc/30313
canonical: true
consequence: splice region
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10083
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2637
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 507
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10606
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 872
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11816
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5563
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3746
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6740
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1817
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4102
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5758
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4250
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 135
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8754
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13640
  bin: 6.25e1
  variant carriers: 0
hgvs: c.8731+3A>C
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: East Asian
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: T
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: MQRankSum

http://identifiers.org/exac.variant/1-19465578-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19465578
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 19465578
    reference: chr 1
allele count: 1
allele frequency: 8.279516476237788e-6
allele num: 120780
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364416
  ensembl transcript: ENST00000375267
  gene symbol: UBR4
  hgvsc: ENST00000375267.2:c.8730T>G
  hgvsp: ENSP00000364416.2:p.Ser2910Arg
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000395313
  ensembl transcript: ENST00000425413
  gene symbol: UBR4
  hgvsc: ENST00000425413.1:c.1554T>G
  hgvsp: ENSP00000395313.1:p.Ser518Arg
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364374
  ensembl transcript: ENST00000375226
  gene symbol: UBR4
  hgvsc: ENST00000375226.2:c.8658T>G
  hgvsp: ENSP00000364374.2:p.Ser2886Arg
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000404897
  ensembl transcript: ENST00000417040
  gene symbol: UBR4
  hgvsc: ENST00000417040.1:c.4788T>G
  hgvsp: ENSP00000404897.1:p.Ser1596Arg
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364403
  ensembl transcript: ENST00000375254
  gene symbol: UBR4
  hgvsc: ENST00000375254.3:c.8730T>G
  hgvsp: ENSP00000364403.3:p.Ser2910Arg
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364365
  ensembl transcript: ENST00000375217
  gene symbol: UBR4
  hgvsc: ENST00000375217.2:c.8709T>G
  hgvsp: ENSP00000364365.2:p.Ser2903Arg
  variant of: http://identifiers.org/hgnc/30313
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.90to99.95
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5600
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11821
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4100
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6744
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 510
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 871
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10078
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10612
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2636
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3742
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1817
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13681
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4254
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2716
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6687
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8742
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Ser2910Arg
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Other
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
reference allele: A
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: QD

1-19465581-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19465581
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 19465581
    reference: chr 1
allele count: 1
allele frequency: 8.276364358664525e-6
allele num: 120826
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364365
  ensembl transcript: ENST00000375217
  gene symbol: UBR4
  hgvsc: ENST00000375217.2:c.8706C>T
  hgvsp: ENST00000375217.2:c.8706C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364403
  ensembl transcript: ENST00000375254
  gene symbol: UBR4
  hgvsc: ENST00000375254.3:c.8727C>T
  hgvsp: ENST00000375254.3:c.8727C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000395313
  ensembl transcript: ENST00000425413
  gene symbol: UBR4
  hgvsc: ENST00000425413.1:c.1551C>T
  hgvsp: ENST00000425413.1:c.1551C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364416
  ensembl transcript: ENST00000375267
  gene symbol: UBR4
  hgvsc: ENST00000375267.2:c.8727C>T
  hgvsp: ENST00000375267.2:c.8727C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364374
  ensembl transcript: ENST00000375226
  gene symbol: UBR4
  hgvsc: ENST00000375226.2:c.8655C>T
  hgvsp: ENST00000375226.2:c.8655C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000404897
  ensembl transcript: ENST00000417040
  gene symbol: UBR4
  hgvsc: ENST00000417040.1:c.4785C>T
  hgvsp: ENST00000417040.1:c.4785C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30313
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 10079
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4123
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 511
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6742
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11822
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5604
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2623
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10622
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 874
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1816
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3744
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5756
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8743
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4102
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13676
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13792
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 4.75e1
  variant carriers: 0
hgvs: p.His2909His
num of homozygotes: 0
population: Latino
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: African
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD

1-19465587-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19465587
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 19465587
    reference: chr 1
allele count: 33
allele frequency: 2.895448004773102e-4
allele num: 113972
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364374
  ensembl transcript: ENST00000375226
  gene symbol: UBR4
  hgvsc: ENST00000375226.2:c.8649C>G
  hgvsp: ENST00000375226.2:c.8649C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364403
  ensembl transcript: ENST00000375254
  gene symbol: UBR4
  hgvsc: ENST00000375254.3:c.8721C>G
  hgvsp: ENST00000375254.3:c.8721C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364365
  ensembl transcript: ENST00000375217
  gene symbol: UBR4
  hgvsc: ENST00000375217.2:c.8700C>G
  hgvsp: ENST00000375217.2:c.8700C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000395313
  ensembl transcript: ENST00000425413
  gene symbol: UBR4
  hgvsc: ENST00000425413.1:c.1545C>G
  hgvsp: ENST00000425413.1:c.1545C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000404897
  ensembl transcript: ENST00000417040
  gene symbol: UBR4
  hgvsc: ENST00000417040.1:c.4779C>G
  hgvsp: ENST00000417040.1:c.4779C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364416
  ensembl transcript: ENST00000375267
  gene symbol: UBR4
  hgvsc: ENST00000375267.2:c.8721C>G
  hgvsp: ENST00000375267.2:c.8721C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30313
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.95to100.00
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3729
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1794
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10656
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5495
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 847
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2955
  bin: 9.75e1
  variant carriers: 28
genotype depth: GenotypeDepth
  all individuals: 6771
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10141
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4001
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11846
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 333
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 9.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3340
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 146
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 138
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 365
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5714
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6644
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4063
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Gly2907Gly
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: East Asian
population: Other
population: South Asian
population: African
population: European (Finnish)
reference allele: G
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum

1-19465597-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19465597
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 19465597
    reference: chr 1
allele count: 1
allele frequency: 8.263233568560049e-6
allele num: 121018
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000404897
  ensembl transcript: ENST00000417040
  gene symbol: UBR4
  hgvsc: ENST00000417040.1:c.4769C>T
  hgvsp: ENSP00000404897.1:p.Ser1590Leu
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364403
  ensembl transcript: ENST00000375254
  gene symbol: UBR4
  hgvsc: ENST00000375254.3:c.8711C>T
  hgvsp: ENSP00000364403.3:p.Ser2904Leu
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364374
  ensembl transcript: ENST00000375226
  gene symbol: UBR4
  hgvsc: ENST00000375226.2:c.8639C>T
  hgvsp: ENSP00000364374.2:p.Ser2880Leu
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364416
  ensembl transcript: ENST00000375267
  gene symbol: UBR4
  hgvsc: ENST00000375267.2:c.8711C>T
  hgvsp: ENSP00000364416.2:p.Ser2904Leu
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364365
  ensembl transcript: ENST00000375217
  gene symbol: UBR4
  hgvsc: ENST00000375217.2:c.8690C>T
  hgvsp: ENSP00000364365.2:p.Ser2897Leu
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000395313
  ensembl transcript: ENST00000425413
  gene symbol: UBR4
  hgvsc: ENST00000425413.1:c.1535C>T
  hgvsp: ENSP00000395313.1:p.Ser512Leu
  variant of: http://identifiers.org/hgnc/30313
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 542
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10580
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11172
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5804
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12425
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7201
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4009
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4145
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2017
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1011
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 511
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6073
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4513
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4266
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9141
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Ser2904Leu
num of homozygotes: 0
population: Other
population: Latino
population: African
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum

1-19465605-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19465605
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 19465605
    reference: chr 1
allele count: 7
allele frequency: 5.781779136037003e-5
allele num: 121070
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364403
  ensembl transcript: ENST00000375254
  gene symbol: UBR4
  hgvsc: ENST00000375254.3:c.8703A>G
  hgvsp: ENST00000375254.3:c.8703A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364365
  ensembl transcript: ENST00000375217
  gene symbol: UBR4
  hgvsc: ENST00000375217.2:c.8682A>G
  hgvsp: ENST00000375217.2:c.8682A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364416
  ensembl transcript: ENST00000375267
  gene symbol: UBR4
  hgvsc: ENST00000375267.2:c.8703A>G
  hgvsp: ENST00000375267.2:c.8703A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000395313
  ensembl transcript: ENST00000425413
  gene symbol: UBR4
  hgvsc: ENST00000425413.1:c.1527A>G
  hgvsp: ENST00000425413.1:c.1527A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000404897
  ensembl transcript: ENST00000417040
  gene symbol: UBR4
  hgvsc: ENST00000417040.1:c.4761A>G
  hgvsp: ENST00000417040.1:c.4761A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364374
  ensembl transcript: ENST00000375226
  gene symbol: UBR4
  hgvsc: ENST00000375226.2:c.8631A>G
  hgvsp: ENST00000375226.2:c.8631A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30313
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7203
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12425
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4160
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 542
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10579
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11177
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4011
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1010
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5805
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2015
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 510
  bin: 9.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4512
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 242
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9147
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6986
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Ala2901Ala
num of homozygotes: 0
population: African
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Latino
reference allele: T
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS

http://identifiers.org/exac.variant/1-19465612-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19465612
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 19465612
    reference: chr 1
allele count: 1
allele frequency: 8.260639703938672e-6
allele num: 121056
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000404897
  ensembl transcript: ENST00000417040
  gene symbol: UBR4
  hgvsc: ENST00000417040.1:c.4754G>T
  hgvsp: ENSP00000404897.1:p.Gly1585Val
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364403
  ensembl transcript: ENST00000375254
  gene symbol: UBR4
  hgvsc: ENST00000375254.3:c.8696G>T
  hgvsp: ENSP00000364403.3:p.Gly2899Val
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364365
  ensembl transcript: ENST00000375217
  gene symbol: UBR4
  hgvsc: ENST00000375217.2:c.8675G>T
  hgvsp: ENSP00000364365.2:p.Gly2892Val
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364416
  ensembl transcript: ENST00000375267
  gene symbol: UBR4
  hgvsc: ENST00000375267.2:c.8696G>T
  hgvsp: ENSP00000364416.2:p.Gly2899Val
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364374
  ensembl transcript: ENST00000375226
  gene symbol: UBR4
  hgvsc: ENST00000375226.2:c.8624G>T
  hgvsp: ENSP00000364374.2:p.Gly2875Val
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000395313
  ensembl transcript: ENST00000425413
  gene symbol: UBR4
  hgvsc: ENST00000425413.1:c.1520G>T
  hgvsp: ENSP00000395313.1:p.Gly507Val
  variant of: http://identifiers.org/hgnc/30313
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7204
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 505
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5810
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4010
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11191
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1010
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4119
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10580
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2015
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 542
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12429
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6980
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11894
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 239
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6073
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Gly2899Val
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
population: Other
population: South Asian
reference allele: C
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD

1-19465612-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19465612
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 19465612
    reference: chr 1
allele count: 1
allele frequency: 8.260639703938672e-6
allele num: 121056
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364416
  ensembl transcript: ENST00000375267
  gene symbol: UBR4
  hgvsc: ENST00000375267.2:c.8696G>A
  hgvsp: ENSP00000364416.2:p.Gly2899Asp
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364365
  ensembl transcript: ENST00000375217
  gene symbol: UBR4
  hgvsc: ENST00000375217.2:c.8675G>A
  hgvsp: ENSP00000364365.2:p.Gly2892Asp
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364374
  ensembl transcript: ENST00000375226
  gene symbol: UBR4
  hgvsc: ENST00000375226.2:c.8624G>A
  hgvsp: ENSP00000364374.2:p.Gly2875Asp
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000404897
  ensembl transcript: ENST00000417040
  gene symbol: UBR4
  hgvsc: ENST00000417040.1:c.4754G>A
  hgvsp: ENSP00000404897.1:p.Gly1585Asp
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000395313
  ensembl transcript: ENST00000425413
  gene symbol: UBR4
  hgvsc: ENST00000425413.1:c.1520G>A
  hgvsp: ENSP00000395313.1:p.Gly507Asp
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364403
  ensembl transcript: ENST00000375254
  gene symbol: UBR4
  hgvsc: ENST00000375254.3:c.8696G>A
  hgvsp: ENSP00000364403.3:p.Gly2899Asp
  variant of: http://identifiers.org/hgnc/30313
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10580
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5810
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4119
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 505
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1010
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7204
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2015
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4010
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12429
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11191
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 542
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14340
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9136
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11894
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Gly2899Asp
num of homozygotes: 0
population: East Asian
population: Other
population: African
population: European (Non-Finnish)
population: South Asian
population: Latino
population: European (Finnish)
reference allele: C
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum

1-19465616-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19465616
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 19465616
    reference: chr 1
allele count: 1
allele frequency: 8.259957378619926e-6
allele num: 121066
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000404897
  ensembl transcript: ENST00000417040
  gene symbol: UBR4
  hgvsc: ENST00000417040.1:c.4750G>A
  hgvsp: ENSP00000404897.1:p.Gly1584Arg
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364365
  ensembl transcript: ENST00000375217
  gene symbol: UBR4
  hgvsc: ENST00000375217.2:c.8671G>A
  hgvsp: ENSP00000364365.2:p.Gly2891Arg
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364416
  ensembl transcript: ENST00000375267
  gene symbol: UBR4
  hgvsc: ENST00000375267.2:c.8692G>A
  hgvsp: ENSP00000364416.2:p.Gly2898Arg
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364403
  ensembl transcript: ENST00000375254
  gene symbol: UBR4
  hgvsc: ENST00000375254.3:c.8692G>A
  hgvsp: ENSP00000364403.3:p.Gly2898Arg
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000395313
  ensembl transcript: ENST00000425413
  gene symbol: UBR4
  hgvsc: ENST00000425413.1:c.1516G>A
  hgvsp: ENSP00000395313.1:p.Gly506Arg
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364374
  ensembl transcript: ENST00000375226
  gene symbol: UBR4
  hgvsc: ENST00000375226.2:c.8620G>A
  hgvsp: ENSP00000364374.2:p.Gly2874Arg
  variant of: http://identifiers.org/hgnc/30313
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5822
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4010
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 541
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2015
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1010
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10580
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12427
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4137
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11183
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7204
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 503
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 237
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11890
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6981
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4511
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14394
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Gly2898Arg
num of homozygotes: 0
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: East Asian
reference allele: C
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: QD

1-19465623-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19465623
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 19465623
    reference: chr 1
allele count: 2
allele frequency: 1.65188231990353e-5
allele num: 121074
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000395313
  ensembl transcript: ENST00000425413
  gene symbol: UBR4
  hgvsc: ENST00000425413.1:c.1509G>A
  hgvsp: ENST00000425413.1:c.1509G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364365
  ensembl transcript: ENST00000375217
  gene symbol: UBR4
  hgvsc: ENST00000375217.2:c.8664G>A
  hgvsp: ENST00000375217.2:c.8664G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364403
  ensembl transcript: ENST00000375254
  gene symbol: UBR4
  hgvsc: ENST00000375254.3:c.8685G>A
  hgvsp: ENST00000375254.3:c.8685G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364416
  ensembl transcript: ENST00000375267
  gene symbol: UBR4
  hgvsc: ENST00000375267.2:c.8685G>A
  hgvsp: ENST00000375267.2:c.8685G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000404897
  ensembl transcript: ENST00000417040
  gene symbol: UBR4
  hgvsc: ENST00000417040.1:c.4743G>A
  hgvsp: ENST00000417040.1:c.4743G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364374
  ensembl transcript: ENST00000375226
  gene symbol: UBR4
  hgvsc: ENST00000375226.2:c.8613G>A
  hgvsp: ENST00000375226.2:c.8613G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30313
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7205
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4011
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 541
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11179
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10581
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12426
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1011
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 502
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5829
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2015
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4141
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 228
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4275
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4511
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Ser2895Ser
num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: Latino
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP

1-19465641-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19465641
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 19465641
    reference: chr 1
allele count: 10
allele frequency: 8.258320257659592e-5
allele num: 121090
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364403
  ensembl transcript: ENST00000375254
  gene symbol: UBR4
  hgvsc: ENST00000375254.3:c.8667C>T
  hgvsp: ENST00000375254.3:c.8667C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000395313
  ensembl transcript: ENST00000425413
  gene symbol: UBR4
  hgvsc: ENST00000425413.1:c.1491C>T
  hgvsp: ENST00000425413.1:c.1491C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364374
  ensembl transcript: ENST00000375226
  gene symbol: UBR4
  hgvsc: ENST00000375226.2:c.8595C>T
  hgvsp: ENST00000375226.2:c.8595C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364365
  ensembl transcript: ENST00000375217
  gene symbol: UBR4
  hgvsc: ENST00000375217.2:c.8646C>T
  hgvsp: ENST00000375217.2:c.8646C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000404897
  ensembl transcript: ENST00000417040
  gene symbol: UBR4
  hgvsc: ENST00000417040.1:c.4725C>T
  hgvsp: ENST00000417040.1:c.4725C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364416
  ensembl transcript: ENST00000375267
  gene symbol: UBR4
  hgvsc: ENST00000375267.2:c.8667C>T
  hgvsp: ENST00000375267.2:c.8667C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30313
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11182
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10583
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7201
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2018
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 541
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4157
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5857
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 503
  bin: 9.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 12425
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4007
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1011
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 223
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4274
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4511
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
hgvs: p.His2889His
num of homozygotes: 0
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Other
population: Latino
population: East Asian
population: South Asian
reference allele: G
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: QD

1-19465656-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19465656
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 19465656
    reference: chr 1
allele count: 3
allele frequency: 2.478888136041381e-5
allele num: 121022
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000395313
  ensembl transcript: ENST00000425413
  gene symbol: UBR4
  hgvsc: ENST00000425413.1:c.1476C>T
  hgvsp: ENST00000425413.1:c.1476C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364365
  ensembl transcript: ENST00000375217
  gene symbol: UBR4
  hgvsc: ENST00000375217.2:c.8631C>T
  hgvsp: ENST00000375217.2:c.8631C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364416
  ensembl transcript: ENST00000375267
  gene symbol: UBR4
  hgvsc: ENST00000375267.2:c.8652C>T
  hgvsp: ENST00000375267.2:c.8652C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364403
  ensembl transcript: ENST00000375254
  gene symbol: UBR4
  hgvsc: ENST00000375254.3:c.8652C>T
  hgvsp: ENST00000375254.3:c.8652C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000404897
  ensembl transcript: ENST00000417040
  gene symbol: UBR4
  hgvsc: ENST00000417040.1:c.4710C>T
  hgvsp: ENST00000417040.1:c.4710C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364374
  ensembl transcript: ENST00000375226
  gene symbol: UBR4
  hgvsc: ENST00000375226.2:c.8580C>T
  hgvsp: ENST00000375226.2:c.8580C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30313
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11183
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10585
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5874
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2016
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7200
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12424
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4007
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4105
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 541
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1010
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 270
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6977
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14421
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Thr2884Thr
num of homozygotes: 0
population: Other
population: African
population: South Asian
population: European (Finnish)
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD

1-19465658-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19465658
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 19465658
    reference: chr 1
allele count: 1
allele frequency: 8.262414277451872e-6
allele num: 121030
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364416
  ensembl transcript: ENST00000375267
  gene symbol: UBR4
  hgvsc: ENST00000375267.2:c.8650A>C
  hgvsp: ENSP00000364416.2:p.Thr2884Pro
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364365
  ensembl transcript: ENST00000375217
  gene symbol: UBR4
  hgvsc: ENST00000375217.2:c.8629A>C
  hgvsp: ENSP00000364365.2:p.Thr2877Pro
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364403
  ensembl transcript: ENST00000375254
  gene symbol: UBR4
  hgvsc: ENST00000375254.3:c.8650A>C
  hgvsp: ENSP00000364403.3:p.Thr2884Pro
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000404897
  ensembl transcript: ENST00000417040
  gene symbol: UBR4
  hgvsc: ENST00000417040.1:c.4708A>C
  hgvsp: ENSP00000404897.1:p.Thr1570Pro
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000395313
  ensembl transcript: ENST00000425413
  gene symbol: UBR4
  hgvsc: ENST00000425413.1:c.1474A>C
  hgvsp: ENSP00000395313.1:p.Thr492Pro
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364374
  ensembl transcript: ENST00000375226
  gene symbol: UBR4
  hgvsc: ENST00000375226.2:c.8578A>C
  hgvsp: ENSP00000364374.2:p.Thr2860Pro
  variant of: http://identifiers.org/hgnc/30313
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10585
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4116
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5870
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11182
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 541
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12425
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7199
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4008
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1010
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 494
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2016
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4510
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 275
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4272
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9142
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Thr2884Pro
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: African
population: East Asian
population: South Asian
population: Other
reference allele: T
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: DP

1-19465680-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19465680
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 19465680
    reference: chr 1
allele count: 2
allele frequency: 1.654396558855158e-5
allele num: 120890
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364403
  ensembl transcript: ENST00000375254
  gene symbol: UBR4
  hgvsc: ENST00000375254.3:c.8628G>A
  hgvsp: ENST00000375254.3:c.8628G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364416
  ensembl transcript: ENST00000375267
  gene symbol: UBR4
  hgvsc: ENST00000375267.2:c.8628G>A
  hgvsp: ENST00000375267.2:c.8628G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364365
  ensembl transcript: ENST00000375217
  gene symbol: UBR4
  hgvsc: ENST00000375217.2:c.8607G>A
  hgvsp: ENST00000375217.2:c.8607G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000395313
  ensembl transcript: ENST00000425413
  gene symbol: UBR4
  hgvsc: ENST00000425413.1:c.1452G>A
  hgvsp: ENST00000425413.1:c.1452G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364374
  ensembl transcript: ENST00000375226
  gene symbol: UBR4
  hgvsc: ENST00000375226.2:c.8556G>A
  hgvsp: ENST00000375226.2:c.8556G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000404897
  ensembl transcript: ENST00000417040
  gene symbol: UBR4
  hgvsc: ENST00000417040.1:c.4686G>A
  hgvsp: ENST00000417040.1:c.4686G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30313
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12424
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11182
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 541
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4008
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5857
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7199
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2016
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10586
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1010
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3998
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4265
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4510
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11878
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14320
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6073
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Ala2876Ala
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Latino
population: South Asian
population: European (Non-Finnish)
population: African
population: Other
reference allele: C
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ

1-19465681-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19465681
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 19465681
    reference: chr 1
allele count: 3
allele frequency: 2.481676951838923e-5
allele num: 120886
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364365
  ensembl transcript: ENST00000375217
  gene symbol: UBR4
  hgvsc: ENST00000375217.2:c.8606C>T
  hgvsp: ENSP00000364365.2:p.Ala2869Val
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000404897
  ensembl transcript: ENST00000417040
  gene symbol: UBR4
  hgvsc: ENST00000417040.1:c.4685C>T
  hgvsp: ENSP00000404897.1:p.Ala1562Val
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364403
  ensembl transcript: ENST00000375254
  gene symbol: UBR4
  hgvsc: ENST00000375254.3:c.8627C>T
  hgvsp: ENSP00000364403.3:p.Ala2876Val
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364416
  ensembl transcript: ENST00000375267
  gene symbol: UBR4
  hgvsc: ENST00000375267.2:c.8627C>T
  hgvsp: ENSP00000364416.2:p.Ala2876Val
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000395313
  ensembl transcript: ENST00000425413
  gene symbol: UBR4
  hgvsc: ENST00000425413.1:c.1451C>T
  hgvsp: ENSP00000395313.1:p.Ala484Val
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364374
  ensembl transcript: ENST00000375226
  gene symbol: UBR4
  hgvsc: ENST00000375226.2:c.8555C>T
  hgvsp: ENSP00000364374.2:p.Ala2852Val
  variant of: http://identifiers.org/hgnc/30313
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5860
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 541
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2016
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11183
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4008
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7199
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10586
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3995
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 491
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1011
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12425
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6073
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 388
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9131
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2848
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4511
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Ala2876Val
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: East Asian
population: African
population: European (Finnish)
reference allele: G
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum

1-19465698-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19465698
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 19465698
    reference: chr 1
allele count: 5
allele frequency: 4.140786749482401e-5
allele num: 120750
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000395313
  ensembl transcript: ENST00000425413
  gene symbol: UBR4
  hgvsc: ENST00000425413.1:c.1434C>T
  hgvsp: ENST00000425413.1:c.1434C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000404897
  ensembl transcript: ENST00000417040
  gene symbol: UBR4
  hgvsc: ENST00000417040.1:c.4668C>T
  hgvsp: ENST00000417040.1:c.4668C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364365
  ensembl transcript: ENST00000375217
  gene symbol: UBR4
  hgvsc: ENST00000375217.2:c.8589C>T
  hgvsp: ENST00000375217.2:c.8589C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364374
  ensembl transcript: ENST00000375226
  gene symbol: UBR4
  hgvsc: ENST00000375226.2:c.8538C>T
  hgvsp: ENST00000375226.2:c.8538C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364403
  ensembl transcript: ENST00000375254
  gene symbol: UBR4
  hgvsc: ENST00000375254.3:c.8610C>T
  hgvsp: ENST00000375254.3:c.8610C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364416
  ensembl transcript: ENST00000375267
  gene symbol: UBR4
  hgvsc: ENST00000375267.2:c.8610C>T
  hgvsp: ENST00000375267.2:c.8610C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30313
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11184
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10582
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7199
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 4008
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 541
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5816
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12425
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1011
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2015
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3879
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 95
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6980
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6067
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4510
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Asp2870Asp
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: South Asian
population: European (Finnish)
population: Latino
population: African
population: East Asian
reference allele: G
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP

1-19465707-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19465707
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 19465707
    reference: chr 1
allele count: 4
allele frequency: 3.314660744472803e-5
allele num: 120676
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000404897
  ensembl transcript: ENST00000417040
  gene symbol: UBR4
  hgvsc: ENST00000417040.1:c.4659C>A
  hgvsp: ENST00000417040.1:c.4659C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364416
  ensembl transcript: ENST00000375267
  gene symbol: UBR4
  hgvsc: ENST00000375267.2:c.8601C>A
  hgvsp: ENST00000375267.2:c.8601C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364403
  ensembl transcript: ENST00000375254
  gene symbol: UBR4
  hgvsc: ENST00000375254.3:c.8601C>A
  hgvsp: ENST00000375254.3:c.8601C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000395313
  ensembl transcript: ENST00000425413
  gene symbol: UBR4
  hgvsc: ENST00000425413.1:c.1425C>A
  hgvsp: ENST00000425413.1:c.1425C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364365
  ensembl transcript: ENST00000375217
  gene symbol: UBR4
  hgvsc: ENST00000375217.2:c.8580C>A
  hgvsp: ENST00000375217.2:c.8580C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364374
  ensembl transcript: ENST00000375226
  gene symbol: UBR4
  hgvsc: ENST00000375226.2:c.8529C>A
  hgvsp: ENST00000375226.2:c.8529C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30313
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11184
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 541
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10583
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4008
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3754
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5786
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12421
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1011
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7199
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2016
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 636
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2845
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6065
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4511
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4259
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Ala2867Ala
num of homozygotes: 0
population: South Asian
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: QD

1-19465716-TGA-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19465716
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 19465714
    reference: chr 1
allele count: 1
allele frequency: 8.294900295298451e-6
allele num: 120556
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364416
  ensembl transcript: ENST00000375267
  gene symbol: UBR4
  hgvsc: ENST00000375267.2:c.8594-4_8594-3delTC
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364374
  ensembl transcript: ENST00000375226
  gene symbol: UBR4
  hgvsc: ENST00000375226.2:c.8522-4_8522-3delTC
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000395313
  ensembl transcript: ENST00000425413
  gene symbol: UBR4
  hgvsc: ENST00000425413.1:c.1418-4_1418-3delTC
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364403
  ensembl transcript: ENST00000375254
  gene symbol: UBR4
  hgvsc: ENST00000375254.3:c.8594-4_8594-3delTC
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000404897
  ensembl transcript: ENST00000417040
  gene symbol: UBR4
  hgvsc: ENST00000417040.1:c.4652-4_4652-3delTC
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364365
  ensembl transcript: ENST00000375217
  gene symbol: UBR4
  hgvsc: ENST00000375217.2:c.8573-4_8573-3delTC
  variant of: http://identifiers.org/hgnc/30313
canonical: true
consequence: splice region
filter: VQSRTrancheINDEL96.00to97.00
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12422
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3623
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5746
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 541
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4009
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10581
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 399
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11170
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1010
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2016
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7197
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 122
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11871
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 13931
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6067
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 761
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 155
  bin: 2.75e1
  variant carriers: 0
hgvs: c.8594-4_8594-3delTC
num of homozygotes: 0
population: Other
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
population: African
population: East Asian
reference allele: TGA
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: DP

1-19465721-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19465721
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 19465721
    reference: chr 1
allele count: 1
allele frequency: 8.302613662781043e-6
allele num: 120444
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364403
  ensembl transcript: ENST00000375254
  gene symbol: UBR4
  hgvsc: ENST00000375254.3:c.8594-7C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364365
  ensembl transcript: ENST00000375217
  gene symbol: UBR4
  hgvsc: ENST00000375217.2:c.8573-7C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000395313
  ensembl transcript: ENST00000425413
  gene symbol: UBR4
  hgvsc: ENST00000425413.1:c.1418-7C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364416
  ensembl transcript: ENST00000375267
  gene symbol: UBR4
  hgvsc: ENST00000375267.2:c.8594-7C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364374
  ensembl transcript: ENST00000375226
  gene symbol: UBR4
  hgvsc: ENST00000375226.2:c.8522-7C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000404897
  ensembl transcript: ENST00000417040
  gene symbol: UBR4
  hgvsc: ENST00000417040.1:c.4652-7C>T
  variant of: http://identifiers.org/hgnc/30313
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 485
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11160
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 540
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1010
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2016
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 717
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5679
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12425
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4008
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10580
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3481
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7197
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4242
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 190
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4511
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9043
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 846
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 5.75e1
  variant carriers: 0
hgvs: c.8594-7C>T
num of homozygotes: 0
population: South Asian
population: Latino
population: Other
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum

1-19465727-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19465727
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 19465727
    reference: chr 1
allele count: 2
allele frequency: 1.661046791688122e-5
allele num: 120406
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000404897
  ensembl transcript: ENST00000417040
  gene symbol: UBR4
  hgvsc: ENST00000417040.1:c.4652-13G>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364365
  ensembl transcript: ENST00000375217
  gene symbol: UBR4
  hgvsc: ENST00000375217.2:c.8573-13G>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364403
  ensembl transcript: ENST00000375254
  gene symbol: UBR4
  hgvsc: ENST00000375254.3:c.8594-13G>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000395313
  ensembl transcript: ENST00000425413
  gene symbol: UBR4
  hgvsc: ENST00000425413.1:c.1418-13G>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364374
  ensembl transcript: ENST00000375226
  gene symbol: UBR4
  hgvsc: ENST00000375226.2:c.8522-13G>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364416
  ensembl transcript: ENST00000375267
  gene symbol: UBR4
  hgvsc: ENST00000375267.2:c.8594-13G>A
  variant of: http://identifiers.org/hgnc/30313
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7196
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5622
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2017
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 540
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1009
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 799
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11134
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 485
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10581
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4006
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12419
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3417
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 904
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2840
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 202
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9027
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4240
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 231
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Latino
population: Other
population: African
population: East Asian
reference allele: C
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ

1-19465728-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19465728
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 19465728
    reference: chr 1
allele count: 14
allele frequency: 1.163061177017911e-4
allele num: 120372
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000404897
  ensembl transcript: ENST00000417040
  gene symbol: UBR4
  hgvsc: ENST00000417040.1:c.4652-14C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364416
  ensembl transcript: ENST00000375267
  gene symbol: UBR4
  hgvsc: ENST00000375267.2:c.8594-14C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364365
  ensembl transcript: ENST00000375217
  gene symbol: UBR4
  hgvsc: ENST00000375217.2:c.8573-14C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364374
  ensembl transcript: ENST00000375226
  gene symbol: UBR4
  hgvsc: ENST00000375226.2:c.8522-14C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000395313
  ensembl transcript: ENST00000425413
  gene symbol: UBR4
  hgvsc: ENST00000425413.1:c.1418-14C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364403
  ensembl transcript: ENST00000375254
  gene symbol: UBR4
  hgvsc: ENST00000375254.3:c.8594-14C>T
  variant of: http://identifiers.org/hgnc/30313
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4010
  bin: 5.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 485
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5603
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1010
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12416
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 827
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7197
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2015
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3380
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10584
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11130
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 540
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 6064
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4239
  bin: 7.25e1
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genotype quality: GenotypeQuality
  all individuals: 80
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 1.75e1
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genotype quality: GenotypeQuality
  all individuals: 19
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4510
  bin: 9.25e1
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genotype quality: GenotypeQuality
  all individuals: 13534
  bin: 6.25e1
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genotype quality: GenotypeQuality
  all individuals: 924
  bin: 2.25e1
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genotype quality: GenotypeQuality
  all individuals: 239
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11872
  bin: 9.75e1
  variant carriers: 13
num of homozygotes: 1
population: European (Non-Finnish)
population: African
population: South Asian
population: European (Finnish)
population: Latino
population: East Asian
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD

http://identifiers.org/exac.variant/1-19465729-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19465729
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 19465729
    reference: chr 1
allele count: 1
allele frequency: 8.307303781484682e-6
allele num: 120376
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364403
  ensembl transcript: ENST00000375254
  gene symbol: UBR4
  hgvsc: ENST00000375254.3:c.8594-15T>G
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000404897
  ensembl transcript: ENST00000417040
  gene symbol: UBR4
  hgvsc: ENST00000417040.1:c.4652-15T>G
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364365
  ensembl transcript: ENST00000375217
  gene symbol: UBR4
  hgvsc: ENST00000375217.2:c.8573-15T>G
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364374
  ensembl transcript: ENST00000375226
  gene symbol: UBR4
  hgvsc: ENST00000375226.2:c.8522-15T>G
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000395313
  ensembl transcript: ENST00000425413
  gene symbol: UBR4
  hgvsc: ENST00000425413.1:c.1418-15T>G
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364416
  ensembl transcript: ENST00000375267
  gene symbol: UBR4
  hgvsc: ENST00000375267.2:c.8594-15T>G
  variant of: http://identifiers.org/hgnc/30313
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12409
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3373
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 844
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4006
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10585
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5587
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2015
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11125
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7197
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1009
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13530
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 246
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6065
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4238
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 226
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: Other
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
reference allele: A
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum

1-19465729-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19465729
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 19465729
    reference: chr 1
allele count: 2
allele frequency: 1.661460756296936e-5
allele num: 120376
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364365
  ensembl transcript: ENST00000375217
  gene symbol: UBR4
  hgvsc: ENST00000375217.2:c.8573-15T>C
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364416
  ensembl transcript: ENST00000375267
  gene symbol: UBR4
  hgvsc: ENST00000375267.2:c.8594-15T>C
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364374
  ensembl transcript: ENST00000375226
  gene symbol: UBR4
  hgvsc: ENST00000375226.2:c.8522-15T>C
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364403
  ensembl transcript: ENST00000375254
  gene symbol: UBR4
  hgvsc: ENST00000375254.3:c.8594-15T>C
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000395313
  ensembl transcript: ENST00000425413
  gene symbol: UBR4
  hgvsc: ENST00000425413.1:c.1418-15T>C
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000404897
  ensembl transcript: ENST00000417040
  gene symbol: UBR4
  hgvsc: ENST00000417040.1:c.4652-15T>C
  variant of: http://identifiers.org/hgnc/30313
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12409
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2015
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1009
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 844
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5587
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10585
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3373
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4006
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11125
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7197
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 226
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4510
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13530
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4238
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 950
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11861
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: South Asian
population: Other
population: African
population: European (Non-Finnish)
reference allele: A
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP

1-19465729-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19465729
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 19465729
    reference: chr 1
allele count: 1
allele frequency: 8.307303781484682e-6
allele num: 120376
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364416
  ensembl transcript: ENST00000375267
  gene symbol: UBR4
  hgvsc: ENST00000375267.2:c.8594-15T>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364374
  ensembl transcript: ENST00000375226
  gene symbol: UBR4
  hgvsc: ENST00000375226.2:c.8522-15T>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364365
  ensembl transcript: ENST00000375217
  gene symbol: UBR4
  hgvsc: ENST00000375217.2:c.8573-15T>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000395313
  ensembl transcript: ENST00000425413
  gene symbol: UBR4
  hgvsc: ENST00000425413.1:c.1418-15T>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000404897
  ensembl transcript: ENST00000417040
  gene symbol: UBR4
  hgvsc: ENST00000417040.1:c.4652-15T>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364403
  ensembl transcript: ENST00000375254
  gene symbol: UBR4
  hgvsc: ENST00000375254.3:c.8594-15T>A
  variant of: http://identifiers.org/hgnc/30313
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2015
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 844
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4006
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11125
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5587
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3373
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1009
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7197
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12409
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10585
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4510
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 950
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9020
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 3.75e1
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genotype quality: GenotypeQuality
  all individuals: 6065
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13530
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 226
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Latino
population: East Asian
reference allele: A
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: MQ

1-19465732-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19465732
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 19465732
    reference: chr 1
allele count: 1
allele frequency: 8.31282835672009e-6
allele num: 120296
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364416
  ensembl transcript: ENST00000375267
  gene symbol: UBR4
  hgvsc: ENST00000375267.2:c.8594-18C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000404897
  ensembl transcript: ENST00000417040
  gene symbol: UBR4
  hgvsc: ENST00000417040.1:c.4652-18C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364365
  ensembl transcript: ENST00000375217
  gene symbol: UBR4
  hgvsc: ENST00000375217.2:c.8573-18C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364403
  ensembl transcript: ENST00000375254
  gene symbol: UBR4
  hgvsc: ENST00000375254.3:c.8594-18C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000395313
  ensembl transcript: ENST00000425413
  gene symbol: UBR4
  hgvsc: ENST00000425413.1:c.1418-18C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364374
  ensembl transcript: ENST00000375226
  gene symbol: UBR4
  hgvsc: ENST00000375226.2:c.8522-18C>T
  variant of: http://identifiers.org/hgnc/30313
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10572
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 944
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4005
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3271
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5501
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2014
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1009
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12402
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11065
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 483
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7201
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 121
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1020
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6965
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 5.25e1
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genotype quality: GenotypeQuality
  all individuals: 4237
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genotype quality: GenotypeQuality
  all individuals: 4507
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genotype quality: GenotypeQuality
  all individuals: 6064
  bin: 8.25e1
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genotype quality: GenotypeQuality
  all individuals: 292
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2841
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Other
population: European (Finnish)
population: South Asian
population: Latino
population: African
population: European (Non-Finnish)
reference allele: G
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/1-19465733-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19465733
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 19465733
    reference: chr 1
allele count: 1
allele frequency: 8.313242996092776e-6
allele num: 120290
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000404897
  ensembl transcript: ENST00000417040
  gene symbol: UBR4
  hgvsc: ENST00000417040.1:c.4652-19G>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364403
  ensembl transcript: ENST00000375254
  gene symbol: UBR4
  hgvsc: ENST00000375254.3:c.8594-19G>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364416
  ensembl transcript: ENST00000375267
  gene symbol: UBR4
  hgvsc: ENST00000375267.2:c.8594-19G>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364374
  ensembl transcript: ENST00000375226
  gene symbol: UBR4
  hgvsc: ENST00000375226.2:c.8522-19G>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364365
  ensembl transcript: ENST00000375217
  gene symbol: UBR4
  hgvsc: ENST00000375217.2:c.8573-19G>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000395313
  ensembl transcript: ENST00000425413
  gene symbol: UBR4
  hgvsc: ENST00000425413.1:c.1418-19G>T
  variant of: http://identifiers.org/hgnc/30313
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2014
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12397
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3260
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4005
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 399
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10575
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 481
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 946
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5503
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11071
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1008
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7199
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13203
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 293
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4238
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8983
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1031
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 297
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6964
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 120
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: South Asian
population: African
population: East Asian
reference allele: C
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum

1-19465737-T-TA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19465737
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 19465738
    reference: chr 1
allele count: 1
allele frequency: 8.320021299254527e-6
allele num: 120192
alternate allele: TA
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000404897
  ensembl transcript: ENST00000417040
  gene symbol: UBR4
  hgvsc: ENST00000417040.1:c.4652-24dupT
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364365
  ensembl transcript: ENST00000375217
  gene symbol: UBR4
  hgvsc: ENST00000375217.2:c.8573-24dupT
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364374
  ensembl transcript: ENST00000375226
  gene symbol: UBR4
  hgvsc: ENST00000375226.2:c.8522-24dupT
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364403
  ensembl transcript: ENST00000375254
  gene symbol: UBR4
  hgvsc: ENST00000375254.3:c.8594-24dupT
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000395313
  ensembl transcript: ENST00000425413
  gene symbol: UBR4
  hgvsc: ENST00000425413.1:c.1418-24dupT
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364416
  ensembl transcript: ENST00000375267
  gene symbol: UBR4
  hgvsc: ENST00000375267.2:c.8594-24dupT
  variant of: http://identifiers.org/hgnc/30313
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7189
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4004
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2014
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 508
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3170
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12342
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1008
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10535
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 538
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10978
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1039
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5456
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6955
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11853
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 99
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8906
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4505
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2839
  bin: 8.75e1
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genotype quality: GenotypeQuality
  all individuals: 12789
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 361
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1116
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: South Asian
population: Latino
population: East Asian
population: Other
population: European (Finnish)
reference allele: T
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: QD

1-19465741-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19465741
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 19465741
    reference: chr 1
allele count: 18
allele frequency: 1.498825919696238e-4
allele num: 120094
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364374
  ensembl transcript: ENST00000375226
  gene symbol: UBR4
  hgvsc: ENST00000375226.2:c.8522-27C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364365
  ensembl transcript: ENST00000375217
  gene symbol: UBR4
  hgvsc: ENST00000375217.2:c.8573-27C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364403
  ensembl transcript: ENST00000375254
  gene symbol: UBR4
  hgvsc: ENST00000375254.3:c.8594-27C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000395313
  ensembl transcript: ENST00000425413
  gene symbol: UBR4
  hgvsc: ENST00000425413.1:c.1418-27C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000404897
  ensembl transcript: ENST00000417040
  gene symbol: UBR4
  hgvsc: ENST00000417040.1:c.4652-27C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364416
  ensembl transcript: ENST00000375267
  gene symbol: UBR4
  hgvsc: ENST00000375267.2:c.8594-27C>T
  variant of: http://identifiers.org/hgnc/30313
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 744
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4005
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1143
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2013
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3224
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10822
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 520
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5398
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12262
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1007
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7179
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10502
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 538
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 481
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12518
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 423
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6057
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 130
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4212
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1199
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: African
population: East Asian
population: Latino
population: South Asian
reference allele: G
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum

http://identifiers.org/exac.variant/1-19465747-A-AAAAC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19465747
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 19465751
    reference: chr 1
allele count: 14
allele frequency: 1.168653377408261e-4
allele num: 119796
alternate allele: AAAAC
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000395313
  ensembl transcript: ENST00000425413
  gene symbol: UBR4
  hgvsc: ENST00000425413.1:c.1418-37_1418-34dupGTTT
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364403
  ensembl transcript: ENST00000375254
  gene symbol: UBR4
  hgvsc: ENST00000375254.3:c.8594-37_8594-34dupGTTT
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364416
  ensembl transcript: ENST00000375267
  gene symbol: UBR4
  hgvsc: ENST00000375267.2:c.8594-37_8594-34dupGTTT
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364374
  ensembl transcript: ENST00000375226
  gene symbol: UBR4
  hgvsc: ENST00000375226.2:c.8522-37_8522-34dupGTTT
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364365
  ensembl transcript: ENST00000375217
  gene symbol: UBR4
  hgvsc: ENST00000375217.2:c.8573-37_8573-34dupGTTT
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000404897
  ensembl transcript: ENST00000417040
  gene symbol: UBR4
  hgvsc: ENST00000417040.1:c.4652-37_4652-34dupGTTT
  variant of: http://identifiers.org/hgnc/30313
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12032
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3249
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3976
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10395
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1509
  bin: 1.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1956
  bin: 1.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 537
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1994
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 481
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4840
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 557
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1000
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7143
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10153
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 766
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4448
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11819
  bin: 9.75e1
  variant carriers: 14
genotype quality: GenotypeQuality
  all individuals: 99
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 270
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1683
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6785
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4060
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1130
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 212
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: East Asian
population: Latino
population: South Asian
population: European (Finnish)
population: Other
reference allele: A
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: DP

http://identifiers.org/exac.variant/1-19465747-AAAAC-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19465747
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 19465743
    reference: chr 1
allele count: 75
allele frequency: 6.26064309325854e-4
allele num: 119796
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364403
  ensembl transcript: ENST00000375254
  gene symbol: UBR4
  hgvsc: ENST00000375254.3:c.8594-37_8594-34delGTTT
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364416
  ensembl transcript: ENST00000375267
  gene symbol: UBR4
  hgvsc: ENST00000375267.2:c.8594-37_8594-34delGTTT
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364374
  ensembl transcript: ENST00000375226
  gene symbol: UBR4
  hgvsc: ENST00000375226.2:c.8522-37_8522-34delGTTT
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000404897
  ensembl transcript: ENST00000417040
  gene symbol: UBR4
  hgvsc: ENST00000417040.1:c.4652-37_4652-34delGTTT
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364365
  ensembl transcript: ENST00000375217
  gene symbol: UBR4
  hgvsc: ENST00000375217.2:c.8573-37_8573-34delGTTT
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000395313
  ensembl transcript: ENST00000425413
  gene symbol: UBR4
  hgvsc: ENST00000425413.1:c.1418-37_1418-34delGTTT
  variant of: http://identifiers.org/hgnc/30313
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10153
  bin: 3.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 1994
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 481
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 537
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10395
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 557
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1509
  bin: 1.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 1956
  bin: 1.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 12032
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3976
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1000
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4840
  bin: 2.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 7143
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3249
  bin: 2.25e1
  variant carriers: 29
genotype quality: GenotypeQuality
  all individuals: 2801
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 147
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 212
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4060
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1683
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 270
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11819
  bin: 9.75e1
  variant carriers: 73
genotype quality: GenotypeQuality
  all individuals: 99
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6785
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 766
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 707
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: Other
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
reference allele: AAAAC
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: QD

http://identifiers.org/exac.variant/1-19465747-AAAACAAAC-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19465747
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 19465739
    reference: chr 1
allele count: 13
allele frequency: 1.085178136164813e-4
allele num: 119796
alternate allele: A
canonical: false
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1000
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10395
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1956
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3976
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 537
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4840
  bin: 2.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 557
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3249
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1509
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10153
  bin: 3.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 7143
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12032
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 481
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1994
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6785
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 270
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 212
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1683
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 99
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 707
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 282
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8245
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 766
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4060
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1130
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 147
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11819
  bin: 9.75e1
  variant carriers: 13
genotype quality: GenotypeQuality
  all individuals: 4448
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2801
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5989
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11048
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 11432
  num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 6598
  num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 5
  allele frequency: 3.053248656570591e-4
  allele num: 16376
  num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 7
  allele frequency: 1.062570205531437e-4
  allele num: 65878
  num of homozygotes: 0
population: African
population: Other
population: East Asian
reference allele: AAAACAAAC
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum

http://identifiers.org/exac.variant/1-19465759-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19465759
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 19465759
    reference: chr 1
allele count: 1
allele frequency: 8.445232666159953e-6
allele num: 118410
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000395313
  ensembl transcript: ENST00000425413
  gene symbol: UBR4
  hgvsc: ENST00000425413.1:c.1418-45G>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364374
  ensembl transcript: ENST00000375226
  gene symbol: UBR4
  hgvsc: ENST00000375226.2:c.8522-45G>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000404897
  ensembl transcript: ENST00000417040
  gene symbol: UBR4
  hgvsc: ENST00000417040.1:c.4652-45G>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364365
  ensembl transcript: ENST00000375217
  gene symbol: UBR4
  hgvsc: ENST00000375217.2:c.8573-45G>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364416
  ensembl transcript: ENST00000375267
  gene symbol: UBR4
  hgvsc: ENST00000375267.2:c.8594-45G>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364403
  ensembl transcript: ENST00000375254
  gene symbol: UBR4
  hgvsc: ENST00000375254.3:c.8594-45G>T
  variant of: http://identifiers.org/hgnc/30313
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 944
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1742
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 474
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 743
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11136
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7955
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3980
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4005
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9742
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9027
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2322
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1279
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6122
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2217
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1221
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6383
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 389
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2581
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1445
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4402
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2344
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2428
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5914
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 311
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3363
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Latino
population: African
population: East Asian
population: European (Finnish)
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum

1-19465759-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19465759
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 19465759
    reference: chr 1
allele count: 2
allele frequency: 1.689046533231991e-5
allele num: 118410
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364403
  ensembl transcript: ENST00000375254
  gene symbol: UBR4
  hgvsc: ENST00000375254.3:c.8594-45G>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364374
  ensembl transcript: ENST00000375226
  gene symbol: UBR4
  hgvsc: ENST00000375226.2:c.8522-45G>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000404897
  ensembl transcript: ENST00000417040
  gene symbol: UBR4
  hgvsc: ENST00000417040.1:c.4652-45G>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364365
  ensembl transcript: ENST00000375217
  gene symbol: UBR4
  hgvsc: ENST00000375217.2:c.8573-45G>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000395313
  ensembl transcript: ENST00000425413
  gene symbol: UBR4
  hgvsc: ENST00000425413.1:c.1418-45G>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364416
  ensembl transcript: ENST00000375267
  gene symbol: UBR4
  hgvsc: ENST00000375267.2:c.8594-45G>A
  variant of: http://identifiers.org/hgnc/30313
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9742
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9027
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 474
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4005
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11136
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7955
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3980
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 944
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1742
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2322
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1279
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 743
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6122
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13928
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2199
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 389
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3363
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2217
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2823
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1445
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2428
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4259
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 311
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1221
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5914
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: South Asian
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
reference allele: C
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum

1-19467232-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19467232
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 19467232
    reference: chr 1
allele count: 0
allele frequency: 0.0e0
allele num: 73014
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364365
  ensembl transcript: ENST00000375217
  gene symbol: UBR4
  hgvsc: ENST00000375217.2:c.8572+609C>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364374
  ensembl transcript: ENST00000375226
  gene symbol: UBR4
  hgvsc: ENST00000375226.2:c.8521+609C>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364403
  ensembl transcript: ENST00000375254
  gene symbol: UBR4
  hgvsc: ENST00000375254.3:c.8593+50C>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000404897
  ensembl transcript: ENST00000417040
  gene symbol: UBR4
  hgvsc: ENST00000417040.1:c.4651+609C>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364416
  ensembl transcript: ENST00000375267
  gene symbol: UBR4
  hgvsc: ENST00000375267.2:c.8593+50C>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000395313
  ensembl transcript: ENST00000425413
  gene symbol: UBR4
  hgvsc: ENST00000425413.1:c.1417+609C>A
  variant of: http://identifiers.org/hgnc/30313
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.25e1
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genotype depth: GenotypeDepth
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  bin: 9.75e1
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genotype depth: GenotypeDepth
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  bin: 6.25e1
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genotype depth: GenotypeDepth
  all individuals: 157
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.75e1
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genotype depth: GenotypeDepth
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  bin: 9.25e1
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genotype quality: GenotypeQuality
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  bin: 3.75e1
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genotype quality: GenotypeQuality
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  bin: 2.5e0
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genotype quality: GenotypeQuality
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  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 3.25e1
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genotype quality: GenotypeQuality
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  bin: 7.5e0
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genotype quality: GenotypeQuality
  all individuals: 5481
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 234
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 13594
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1999
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 339
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5737
  bin: 1.75e1
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genotype quality: GenotypeQuality
  all individuals: 635
  bin: 7.25e1
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genotype quality: GenotypeQuality
  all individuals: 2561
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: Other
population: East Asian
population: South Asian
population: European (Finnish)
reference allele: G
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum

1-19467233-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19467233
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 19467233
    reference: chr 1
allele count: 1
allele frequency: 1.373098258911408e-5
allele num: 72828
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000404897
  ensembl transcript: ENST00000417040
  gene symbol: UBR4
  hgvsc: ENST00000417040.1:c.4651+608G>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364416
  ensembl transcript: ENST00000375267
  gene symbol: UBR4
  hgvsc: ENST00000375267.2:c.8593+49G>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364374
  ensembl transcript: ENST00000375226
  gene symbol: UBR4
  hgvsc: ENST00000375226.2:c.8521+608G>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000395313
  ensembl transcript: ENST00000425413
  gene symbol: UBR4
  hgvsc: ENST00000425413.1:c.1417+608G>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364403
  ensembl transcript: ENST00000375254
  gene symbol: UBR4
  hgvsc: ENST00000375254.3:c.8593+49G>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364365
  ensembl transcript: ENST00000375217
  gene symbol: UBR4
  hgvsc: ENST00000375217.2:c.8572+608G>A
  variant of: http://identifiers.org/hgnc/30313
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3450
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2263
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18351
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  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3285
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3875
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19801
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1069
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.25e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 110
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genotype depth: GenotypeDepth
  all individuals: 6927
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genotype depth: GenotypeDepth
  all individuals: 14
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genotype quality: GenotypeQuality
  all individuals: 2418
  bin: 4.75e1
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genotype quality: GenotypeQuality
  all individuals: 1445
  bin: 9.75e1
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genotype quality: GenotypeQuality
  all individuals: 667
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 2.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 4963
  bin: 6.25e1
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genotype quality: GenotypeQuality
  all individuals: 617
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Latino
population: European (Finnish)
population: Other
reference allele: C
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP

1-19467244-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19467244
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 19467244
    reference: chr 1
allele count: 1
allele frequency: 1.33764948232965e-5
allele num: 74758
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364365
  ensembl transcript: ENST00000375217
  gene symbol: UBR4
  hgvsc: ENST00000375217.2:c.8572+597A>G
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364403
  ensembl transcript: ENST00000375254
  gene symbol: UBR4
  hgvsc: ENST00000375254.3:c.8593+38A>G
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364374
  ensembl transcript: ENST00000375226
  gene symbol: UBR4
  hgvsc: ENST00000375226.2:c.8521+597A>G
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000395313
  ensembl transcript: ENST00000425413
  gene symbol: UBR4
  hgvsc: ENST00000425413.1:c.1417+597A>G
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000404897
  ensembl transcript: ENST00000417040
  gene symbol: UBR4
  hgvsc: ENST00000417040.1:c.4651+597A>G
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364416
  ensembl transcript: ENST00000375267
  gene symbol: UBR4
  hgvsc: ENST00000375267.2:c.8593+38A>G
  variant of: http://identifiers.org/hgnc/30313
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2708
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 571
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4131
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1062
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
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genotype quality: GenotypeQuality
  all individuals: 308
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genotype quality: GenotypeQuality
  all individuals: 627
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 9915
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genotype quality: GenotypeQuality
  all individuals: 1465
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: South Asian
reference allele: T
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum

1-19467246-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19467246
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 19467246
    reference: chr 1
allele count: 4
allele frequency: 5.301243141516686e-5
allele num: 75454
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364374
  ensembl transcript: ENST00000375226
  gene symbol: UBR4
  hgvsc: ENST00000375226.2:c.8521+595C>G
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364365
  ensembl transcript: ENST00000375217
  gene symbol: UBR4
  hgvsc: ENST00000375217.2:c.8572+595C>G
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364416
  ensembl transcript: ENST00000375267
  gene symbol: UBR4
  hgvsc: ENST00000375267.2:c.8593+36C>G
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000395313
  ensembl transcript: ENST00000425413
  gene symbol: UBR4
  hgvsc: ENST00000425413.1:c.1417+595C>G
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364403
  ensembl transcript: ENST00000375254
  gene symbol: UBR4
  hgvsc: ENST00000375254.3:c.8593+36C>G
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000404897
  ensembl transcript: ENST00000417040
  gene symbol: UBR4
  hgvsc: ENST00000417040.1:c.4651+595C>G
  variant of: http://identifiers.org/hgnc/30313
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2340
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1062
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3824
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8090
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  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 1
genotype depth: GenotypeDepth
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  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 6.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 1376
  bin: 4.25e1
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genotype quality: GenotypeQuality
  all individuals: 5356
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: Other
population: European (Finnish)
population: East Asian
population: African
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP

1-19467255-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19467255
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 19467255
    reference: chr 1
allele count: 1
allele frequency: 1.263775149125468e-5
allele num: 79128
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364416
  ensembl transcript: ENST00000375267
  gene symbol: UBR4
  hgvsc: ENST00000375267.2:c.8593+27C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364374
  ensembl transcript: ENST00000375226
  gene symbol: UBR4
  hgvsc: ENST00000375226.2:c.8521+586C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000404897
  ensembl transcript: ENST00000417040
  gene symbol: UBR4
  hgvsc: ENST00000417040.1:c.4651+586C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364403
  ensembl transcript: ENST00000375254
  gene symbol: UBR4
  hgvsc: ENST00000375254.3:c.8593+27C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000395313
  ensembl transcript: ENST00000425413
  gene symbol: UBR4
  hgvsc: ENST00000425413.1:c.1417+586C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364365
  ensembl transcript: ENST00000375217
  gene symbol: UBR4
  hgvsc: ENST00000375217.2:c.8572+586C>T
  variant of: http://identifiers.org/hgnc/30313
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4455
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13777
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19452
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13953
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1351
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2406
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2635
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1066
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1276
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5965
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 283
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 539
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 411
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19710
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 198
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 644
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2118
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 218
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 708
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3088
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 483
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: South Asian
population: Latino
population: East Asian
population: Other
reference allele: G
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: DP

1-19467258-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19467258
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 19467258
    reference: chr 1
allele count: 1
allele frequency: 1.227505953403874e-5
allele num: 81466
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364374
  ensembl transcript: ENST00000375226
  gene symbol: UBR4
  hgvsc: ENST00000375226.2:c.8521+583C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000404897
  ensembl transcript: ENST00000417040
  gene symbol: UBR4
  hgvsc: ENST00000417040.1:c.4651+583C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364403
  ensembl transcript: ENST00000375254
  gene symbol: UBR4
  hgvsc: ENST00000375254.3:c.8593+24C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364365
  ensembl transcript: ENST00000375217
  gene symbol: UBR4
  hgvsc: ENST00000375217.2:c.8572+583C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364416
  ensembl transcript: ENST00000375267
  gene symbol: UBR4
  hgvsc: ENST00000375267.2:c.8593+24C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000395313
  ensembl transcript: ENST00000425413
  gene symbol: UBR4
  hgvsc: ENST00000425413.1:c.1417+583C>T
  variant of: http://identifiers.org/hgnc/30313
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11953
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2363
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 973
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18517
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1067
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2467
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16848
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4914
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4133
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 521
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18962
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 379
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 988
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5045
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2531
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 670
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 219
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 433
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 442
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 320
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 207
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: Latino
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum

1-19467260-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19467260
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 19467260
    reference: chr 1
allele count: 1
allele frequency: 1.197088680329439e-5
allele num: 83536
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364403
  ensembl transcript: ENST00000375254
  gene symbol: UBR4
  hgvsc: ENST00000375254.3:c.8593+22C>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000404897
  ensembl transcript: ENST00000417040
  gene symbol: UBR4
  hgvsc: ENST00000417040.1:c.4651+581C>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364374
  ensembl transcript: ENST00000375226
  gene symbol: UBR4
  hgvsc: ENST00000375226.2:c.8521+581C>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364365
  ensembl transcript: ENST00000375217
  gene symbol: UBR4
  hgvsc: ENST00000375217.2:c.8572+581C>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364416
  ensembl transcript: ENST00000375267
  gene symbol: UBR4
  hgvsc: ENST00000375267.2:c.8593+22C>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000395313
  ensembl transcript: ENST00000425413
  gene symbol: UBR4
  hgvsc: ENST00000425413.1:c.1417+581C>A
  variant of: http://identifiers.org/hgnc/30313
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10612
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19166
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2048
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17806
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5132
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 794
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1065
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2482
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 147
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22071
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18315
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3734
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 353
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 280
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4404
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 747
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 330
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 809
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 614
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2210
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 526
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Other
population: African
population: Latino
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: BaseQRankSum

1-19467274-A-ACAGTTACCTGATGCTGTGGT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19467274
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 19467294
    reference: chr 1
allele count: 1
allele frequency: 1.030821564787135e-5
allele num: 97010
alternate allele: ACAGTTACCTGATGCTGTGGT
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364416
  ensembl transcript: ENST00000375267
  gene symbol: UBR4
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000395313
  ensembl transcript: ENST00000425413
  gene symbol: UBR4
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364365
  ensembl transcript: ENST00000375217
  gene symbol: UBR4
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364403
  ensembl transcript: ENST00000375254
  gene symbol: UBR4
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364374
  ensembl transcript: ENST00000375226
  gene symbol: UBR4
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000404897
  ensembl transcript: ENST00000417040
  gene symbol: UBR4
  variant of: http://identifiers.org/hgnc/30313
canonical: true
consequence: splice region
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4926
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6834
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 574
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2656
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1228
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30347
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11739
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1074
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 229
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 836
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 521
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 182
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3022
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 508
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 361
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 323
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1441
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1792
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 448
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1847
  bin: 2.75e1
  variant carriers: 0
hgvs: c.8581_8593+7dupACCACAGCATCAGGTAACTG
num of homozygotes: 0
population: South Asian
population: Other
population: European (Finnish)
population: Latino
population: African
population: European (Non-Finnish)
population: East Asian
reference allele: A
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum

1-19467286-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19467286
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 19467286
    reference: chr 1
allele count: 3
allele frequency: 2.852470239227171e-5
allele num: 105172
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000395313
  ensembl transcript: ENST00000425413
  gene symbol: UBR4
  hgvsc: ENST00000425413.1:c.1417+555A>G
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364365
  ensembl transcript: ENST00000375217
  gene symbol: UBR4
  hgvsc: ENST00000375217.2:c.8572+555A>G
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364374
  ensembl transcript: ENST00000375226
  gene symbol: UBR4
  hgvsc: ENST00000375226.2:c.8521+555A>G
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364416
  ensembl transcript: ENST00000375267
  gene symbol: UBR4
  hgvsc: ENST00000375267.2:c.8589A>G
  hgvsp: ENST00000375267.2:c.8589A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364403
  ensembl transcript: ENST00000375254
  gene symbol: UBR4
  hgvsc: ENST00000375254.3:c.8589A>G
  hgvsp: ENST00000375254.3:c.8589A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000404897
  ensembl transcript: ENST00000417040
  gene symbol: UBR4
  hgvsc: ENST00000417040.1:c.4651+555A>G
  variant of: http://identifiers.org/hgnc/30313
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2788
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 931
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35587
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1074
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7855
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2755
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7922
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 578
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 545
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 370
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 576
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 323
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3357
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1446
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 922
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8483
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 234
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Ala2863Ala
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: African
population: Latino
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: T
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: DP

1-19467295-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19467295
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 19467295
    reference: chr 1
allele count: 2
allele frequency: 1.841349340796936e-5
allele num: 108616
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364403
  ensembl transcript: ENST00000375254
  gene symbol: UBR4
  hgvsc: ENST00000375254.3:c.8580C>T
  hgvsp: ENST00000375254.3:c.8580C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364416
  ensembl transcript: ENST00000375267
  gene symbol: UBR4
  hgvsc: ENST00000375267.2:c.8580C>T
  hgvsp: ENST00000375267.2:c.8580C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000395313
  ensembl transcript: ENST00000425413
  gene symbol: UBR4
  hgvsc: ENST00000425413.1:c.1417+546C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364365
  ensembl transcript: ENST00000375217
  gene symbol: UBR4
  hgvsc: ENST00000375217.2:c.8572+546C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364374
  ensembl transcript: ENST00000375226
  gene symbol: UBR4
  hgvsc: ENST00000375226.2:c.8521+546C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000404897
  ensembl transcript: ENST00000417040
  gene symbol: UBR4
  hgvsc: ENST00000417040.1:c.4651+546C>T
  variant of: http://identifiers.org/hgnc/30313
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1082
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2134
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 875
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8787
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2875
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6173
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37024
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 945
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 658
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3539
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 194
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 385
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41722
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 174
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 324
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 707
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 750
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Asp2860Asp
num of homozygotes: 0
population: East Asian
population: South Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
reference allele: G
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: QD

1-19467304-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19467304
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 19467304
    reference: chr 1
allele count: 1
allele frequency: 9.0561663436634e-6
allele num: 110422
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000395313
  ensembl transcript: ENST00000425413
  gene symbol: UBR4
  hgvsc: ENST00000425413.1:c.1417+537C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364403
  ensembl transcript: ENST00000375254
  gene symbol: UBR4
  hgvsc: ENST00000375254.3:c.8571C>T
  hgvsp: ENST00000375254.3:c.8571C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000404897
  ensembl transcript: ENST00000417040
  gene symbol: UBR4
  hgvsc: ENST00000417040.1:c.4651+537C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364365
  ensembl transcript: ENST00000375217
  gene symbol: UBR4
  hgvsc: ENST00000375217.2:c.8572+537C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364374
  ensembl transcript: ENST00000375226
  gene symbol: UBR4
  hgvsc: ENST00000375226.2:c.8521+537C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364416
  ensembl transcript: ENST00000375267
  gene symbol: UBR4
  hgvsc: ENST00000375267.2:c.8571C>T
  hgvsp: ENST00000375267.2:c.8571C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30313
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1855
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9388
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5309
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 794
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2924
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37622
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1083
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6080
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 143
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 570
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 964
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 590
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 658
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 522
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 316
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 232
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Thr2857Thr
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Other
population: African
population: European (Non-Finnish)
population: Latino
population: East Asian
reference allele: G
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum

1-19467304-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19467304
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 19467304
    reference: chr 1
allele count: 1
allele frequency: 9.0561663436634e-6
allele num: 110422
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364365
  ensembl transcript: ENST00000375217
  gene symbol: UBR4
  hgvsc: ENST00000375217.2:c.8572+537C>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364374
  ensembl transcript: ENST00000375226
  gene symbol: UBR4
  hgvsc: ENST00000375226.2:c.8521+537C>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364416
  ensembl transcript: ENST00000375267
  gene symbol: UBR4
  hgvsc: ENST00000375267.2:c.8571C>A
  hgvsp: ENST00000375267.2:c.8571C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364403
  ensembl transcript: ENST00000375254
  gene symbol: UBR4
  hgvsc: ENST00000375254.3:c.8571C>A
  hgvsp: ENST00000375254.3:c.8571C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000404897
  ensembl transcript: ENST00000417040
  gene symbol: UBR4
  hgvsc: ENST00000417040.1:c.4651+537C>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000395313
  ensembl transcript: ENST00000425413
  gene symbol: UBR4
  hgvsc: ENST00000425413.1:c.1417+537C>A
  variant of: http://identifiers.org/hgnc/30313
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2924
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1855
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 794
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37622
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1083
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9388
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5309
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 357
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1446
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 946
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 570
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 143
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43308
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 316
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6080
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 964
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Thr2857Thr
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Other
population: East Asian
population: African
population: European (Non-Finnish)
population: Latino
reference allele: G
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: ClippingRankSum

1-19467308-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19467308
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 19467308
    reference: chr 1
allele count: 1
allele frequency: 9.023967658099914e-6
allele num: 110816
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364403
  ensembl transcript: ENST00000375254
  gene symbol: UBR4
  hgvsc: ENST00000375254.3:c.8567G>C
  hgvsp: ENSP00000364403.3:p.Gly2856Ala
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364365
  ensembl transcript: ENST00000375217
  gene symbol: UBR4
  hgvsc: ENST00000375217.2:c.8572+533G>C
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364374
  ensembl transcript: ENST00000375226
  gene symbol: UBR4
  hgvsc: ENST00000375226.2:c.8521+533G>C
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000404897
  ensembl transcript: ENST00000417040
  gene symbol: UBR4
  hgvsc: ENST00000417040.1:c.4651+533G>C
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000395313
  ensembl transcript: ENST00000425413
  gene symbol: UBR4
  hgvsc: ENST00000425413.1:c.1417+533G>C
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364416
  ensembl transcript: ENST00000375267
  gene symbol: UBR4
  hgvsc: ENST00000375267.2:c.8567G>C
  hgvsp: ENSP00000364416.2:p.Gly2856Ala
  variant of: http://identifiers.org/hgnc/30313
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 805
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37598
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1092
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9609
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5101
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1832
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2942
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5921
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 316
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 326
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 968
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43493
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 492
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 139
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 540
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 623
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Gly2856Ala
num of homozygotes: 0
population: Other
population: South Asian
population: European (Finnish)
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: FS

1-19467310-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19467310
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 19467310
    reference: chr 1
allele count: 1
allele frequency: 9.006088115566123e-6
allele num: 111036
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364403
  ensembl transcript: ENST00000375254
  gene symbol: UBR4
  hgvsc: ENST00000375254.3:c.8565A>G
  hgvsp: ENST00000375254.3:c.8565A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364416
  ensembl transcript: ENST00000375267
  gene symbol: UBR4
  hgvsc: ENST00000375267.2:c.8565A>G
  hgvsp: ENST00000375267.2:c.8565A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000404897
  ensembl transcript: ENST00000417040
  gene symbol: UBR4
  hgvsc: ENST00000417040.1:c.4651+531A>G
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364365
  ensembl transcript: ENST00000375217
  gene symbol: UBR4
  hgvsc: ENST00000375217.2:c.8572+531A>G
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000395313
  ensembl transcript: ENST00000425413
  gene symbol: UBR4
  hgvsc: ENST00000425413.1:c.1417+531A>G
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364374
  ensembl transcript: ENST00000375226
  gene symbol: UBR4
  hgvsc: ENST00000375226.2:c.8521+531A>G
  variant of: http://identifiers.org/hgnc/30313
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1838
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5017
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37598
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 805
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1090
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2951
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9677
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 303
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 322
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3712
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 149
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 951
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 229
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5894
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 462
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 961
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 519
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Ala2855Ala
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: African
population: East Asian
population: Latino
population: Other
population: European (Finnish)
reference allele: T
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP

1-19467313-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19467313
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 19467313
    reference: chr 1
allele count: 2
allele frequency: 1.800277242695375e-5
allele num: 111094
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364374
  ensembl transcript: ENST00000375226
  gene symbol: UBR4
  hgvsc: ENST00000375226.2:c.8521+528C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364365
  ensembl transcript: ENST00000375217
  gene symbol: UBR4
  hgvsc: ENST00000375217.2:c.8572+528C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000404897
  ensembl transcript: ENST00000417040
  gene symbol: UBR4
  hgvsc: ENST00000417040.1:c.4651+528C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364403
  ensembl transcript: ENST00000375254
  gene symbol: UBR4
  hgvsc: ENST00000375254.3:c.8562C>T
  hgvsp: ENST00000375254.3:c.8562C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364416
  ensembl transcript: ENST00000375267
  gene symbol: UBR4
  hgvsc: ENST00000375267.2:c.8562C>T
  hgvsp: ENST00000375267.2:c.8562C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000395313
  ensembl transcript: ENST00000425413
  gene symbol: UBR4
  hgvsc: ENST00000425413.1:c.1417+528C>T
  variant of: http://identifiers.org/hgnc/30313
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9904
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1917
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 840
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37266
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1096
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4939
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3017
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 315
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3711
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 944
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 154
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 157
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43419
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 598
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 481
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 594
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 953
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Asp2854Asp
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Finnish)
population: Latino
population: Other
population: African
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum

1-19467322-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19467322
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 19467322
    reference: chr 1
allele count: 36
allele frequency: 3.257977519955112e-4
allele num: 110498
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000404897
  ensembl transcript: ENST00000417040
  gene symbol: UBR4
  hgvsc: ENST00000417040.1:c.4651+519C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000395313
  ensembl transcript: ENST00000425413
  gene symbol: UBR4
  hgvsc: ENST00000425413.1:c.1417+519C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364403
  ensembl transcript: ENST00000375254
  gene symbol: UBR4
  hgvsc: ENST00000375254.3:c.8553C>T
  hgvsp: ENST00000375254.3:c.8553C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364365
  ensembl transcript: ENST00000375217
  gene symbol: UBR4
  hgvsc: ENST00000375217.2:c.8572+519C>T
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364416
  ensembl transcript: ENST00000375267
  gene symbol: UBR4
  hgvsc: ENST00000375267.2:c.8553C>T
  hgvsp: ENST00000375267.2:c.8553C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364374
  ensembl transcript: ENST00000375226
  gene symbol: UBR4
  hgvsc: ENST00000375226.2:c.8521+519C>T
  variant of: http://identifiers.org/hgnc/30313
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2487
  bin: 1.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 10412
  bin: 2.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1093
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 35716
  bin: 2.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5229
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 4.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2995
  bin: 3.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 999
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 227
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 792
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 783
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3663
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 932
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 914
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6669
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1472
  bin: 9.75e1
  variant carriers: 36
genotype quality: GenotypeQuality
  all individuals: 177
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41910
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Ser2851Ser
num of homozygotes: 0
population: Latino
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Other
reference allele: G
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum

1-19467331-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19467331
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 19467331
    reference: chr 1
allele count: 1
allele frequency: 9.135423518234305e-6
allele num: 109464
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364403
  ensembl transcript: ENST00000375254
  gene symbol: UBR4
  hgvsc: ENST00000375254.3:c.8544C>G
  hgvsp: ENST00000375254.3:c.8544C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364365
  ensembl transcript: ENST00000375217
  gene symbol: UBR4
  hgvsc: ENST00000375217.2:c.8572+510C>G
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364416
  ensembl transcript: ENST00000375267
  gene symbol: UBR4
  hgvsc: ENST00000375267.2:c.8544C>G
  hgvsp: ENST00000375267.2:c.8544C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000395313
  ensembl transcript: ENST00000425413
  gene symbol: UBR4
  hgvsc: ENST00000425413.1:c.1417+510C>G
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364374
  ensembl transcript: ENST00000375226
  gene symbol: UBR4
  hgvsc: ENST00000375226.2:c.8521+510C>G
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000404897
  ensembl transcript: ENST00000417040
  gene symbol: UBR4
  hgvsc: ENST00000417040.1:c.4651+510C>G
  variant of: http://identifiers.org/hgnc/30313
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34257
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1092
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5706
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10639
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1163
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3078
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2992
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 225
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 667
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 455
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 220
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 392
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 319
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1437
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 210
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 572
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Pro2848Pro
num of homozygotes: 0
population: Other
population: South Asian
population: European (Finnish)
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum

1-19467332-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19467332
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 19467332
    reference: chr 1
allele count: 1
allele frequency: 9.150972748403155e-6
allele num: 109278
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000395313
  ensembl transcript: ENST00000425413
  gene symbol: UBR4
  hgvsc: ENST00000425413.1:c.1417+509C>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364403
  ensembl transcript: ENST00000375254
  gene symbol: UBR4
  hgvsc: ENST00000375254.3:c.8543C>A
  hgvsp: ENSP00000364403.3:p.Pro2848His
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364374
  ensembl transcript: ENST00000375226
  gene symbol: UBR4
  hgvsc: ENST00000375226.2:c.8521+509C>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000404897
  ensembl transcript: ENST00000417040
  gene symbol: UBR4
  hgvsc: ENST00000417040.1:c.4651+509C>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364365
  ensembl transcript: ENST00000375217
  gene symbol: UBR4
  hgvsc: ENST00000375217.2:c.8572+509C>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364416
  ensembl transcript: ENST00000375267
  gene symbol: UBR4
  hgvsc: ENST00000375267.2:c.8543C>A
  hgvsp: ENSP00000364416.2:p.Pro2848His
  variant of: http://identifiers.org/hgnc/30313
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1191
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5812
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34026
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10624
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3203
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1087
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2980
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 223
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 398
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 95
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1436
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 467
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 216
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41203
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 282
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3571
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7828
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Pro2848His
num of homozygotes: 0
population: East Asian
population: Other
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Latino
reference allele: G
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum

1-19467336-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 19467336
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 19467336
    reference: chr 1
allele count: 1
allele frequency: 9.265264523302141e-6
allele num: 107930
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000404897
  ensembl transcript: ENST00000417040
  gene symbol: UBR4
  hgvsc: ENST00000417040.1:c.4651+505G>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364365
  ensembl transcript: ENST00000375217
  gene symbol: UBR4
  hgvsc: ENST00000375217.2:c.8572+505G>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364416
  ensembl transcript: ENST00000375267
  gene symbol: UBR4
  hgvsc: ENST00000375267.2:c.8539G>A
  hgvsp: ENSP00000364416.2:p.Ala2847Thr
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364374
  ensembl transcript: ENST00000375226
  gene symbol: UBR4
  hgvsc: ENST00000375226.2:c.8521+505G>A
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000364403
  ensembl transcript: ENST00000375254
  gene symbol: UBR4
  hgvsc: ENST00000375254.3:c.8539G>A
  hgvsp: ENSP00000364403.3:p.Ala2847Thr
  variant of: http://identifiers.org/hgnc/30313
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000127481
  ensembl protein: ENSP00000395313
  ensembl transcript: ENST00000425413
  gene symbol: UBR4
  hgvsc: ENST00000425413.1:c.1417+505G>A
  variant of: http://identifiers.org/hgnc/30313
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1495
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3003
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10461
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1090
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32477
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3961
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6396
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 263
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 556
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 683
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 296
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 824
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 827
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Ala2847Thr
num of homozygotes: 0
reference allele: C

GenotypeQuality
all individuals: 2344
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4195
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 552
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2866
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 678
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 202
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12163
bin: 9.75e1
variant carriers: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10114
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 808
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11472
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8544
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.554339716488436e-5
allele num: 64336
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10428
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 9.74e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.3e-2

FS
type: SiteQuality
SIO_000300: 4.658e0

DP
type: SiteQuality
SIO_000300: 1.95011e6

MQRankSum
type: SiteQuality
SIO_000300: 4.37e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.3e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 1.97e0

MQ
type: SiteQuality
SIO_000300: 5.851e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.02e0

VQSLOD
type: SiteQuality
SIO_000300: -8.535e-1

GenotypeQuality
all individuals: 15232
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2345
bin: 8.75e1
variant carriers: 1

GenotypeQuality
all individuals: 12180
bin: 9.75e1
variant carriers: 18

GenotypeQuality
all individuals: 2867
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 115
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4192
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 544
bin: 2.75e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.891196834817012e-5
allele num: 10110
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8542
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11466
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64322
num of homozygotes: 0

South Asian
type: Population
allele count: 14
allele frequency: 1.342281879194631e-3
allele num: 10430
num of homozygotes: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 806
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.96e0

QD
type: SiteQuality
SIO_000300: 7.29e0

DP
type: SiteQuality
SIO_000300: 1.949791e6

MQRankSum
type: SiteQuality
SIO_000300: -3.016e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.06e-2

MQ
type: SiteQuality
SIO_000300: 5.069e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.22e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.99e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.77e-1

FS
type: SiteQuality
SIO_000300: 4.276e0

GenotypeQuality
all individuals: 14999
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4001
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 543
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6814
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2345
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4197
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2868
bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10250
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.904912836767037e-5
allele num: 10096
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 806
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64218
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11466
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8540
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.7e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.79e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.043e0

QD
type: SiteQuality
SIO_000300: 1.924e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.308e0

DP
type: SiteQuality
SIO_000300: 1.94511e6

VQSLOD
type: SiteQuality
SIO_000300: -6.021e-1

MQRankSum
type: SiteQuality
SIO_000300: -5.0e-2

MQ
type: SiteQuality
SIO_000300: 5.867e1

GenotypeQuality
all individuals: 4847
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 678
bin: 3.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 64202
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11468
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 804
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African
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allele count: 10
allele frequency: 9.910802775024777e-4
allele num: 10090
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East Asian
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allele frequency: 0.0e0
allele num: 8538
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South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 10144
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.046e1

VQSLOD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 5.89e-1

ClippingRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -1.9e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.942307e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.002e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 9866
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
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African
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allele count: 7
allele frequency: 6.955484896661367e-4
allele num: 10064
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11456
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 64064
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8520
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.69e-1

ReadPosRankSum
type: SiteQuality
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VQSLOD
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BaseQRankSum
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DP
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MQ
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 5.17e-1

MQRankSum
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QD
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InbreedingCoeff
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SIO_000300: -1.4e-3

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 792
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11450
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10052
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European (Non-Finnish)
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allele count: 2
allele frequency: 3.124218945263684e-5
allele num: 64016
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8518
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South Asian
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allele count: 0
allele frequency: 0.0e0
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InbreedingCoeff
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FS
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DP
type: SiteQuality
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BaseQRankSum
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ReadPosRankSum
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MQRankSum
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VQSLOD
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MQ
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QD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -4.52e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele count: 1
allele frequency: 1.170138076293003e-4
allele num: 8546
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
allele num: 16076
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66048
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11508
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

ReadPosRankSum
type: SiteQuality
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MQRankSum
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QD
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FS
type: SiteQuality
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BaseQRankSum
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VQSLOD
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ClippingRankSum
type: SiteQuality
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DP
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MQ
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8542
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11510
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6598
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.513179796023364e-5
allele num: 66086
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16190
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.769046e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 2.764e1

BaseQRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 4.472e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

ClippingRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: 1.6e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.6e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16194
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.519295047098146e-4
allele num: 6582
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.513637877274241e-5
allele num: 66066
num of homozygotes: 0

African
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allele frequency: 0.0e0
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11510
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 3.1e-1

VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.893e1

InbreedingCoeff
type: SiteQuality
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BaseQRankSum
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MQRankSum
type: SiteQuality
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FS
type: SiteQuality
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DP
type: SiteQuality
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ReadPosRankSum
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ClippingRankSum
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16252
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African
type: Population
allele count: 0
allele frequency: 0.0e0
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11512
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6600
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8546
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
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European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.511898642315019e-5
allele num: 66142
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -6.483e0

FS
type: SiteQuality
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VQSLOD
type: SiteQuality
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MQRankSum
type: SiteQuality
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QD
type: SiteQuality
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MQ
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InbreedingCoeff
type: SiteQuality
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ReadPosRankSum
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DP
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ClippingRankSum
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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African
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European (Non-Finnish)
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South Asian
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East Asian
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allele frequency: 4.327485380116959e-3
allele num: 8550
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Latino
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Other
type: Population
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DP
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QD
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ClippingRankSum
type: SiteQuality
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VQSLOD
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ReadPosRankSum
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MQRankSum
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InbreedingCoeff
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MQ
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FS
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
type: Population
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South Asian
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African
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allele num: 10250
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East Asian
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European (Non-Finnish)
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Latino
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European (Finnish)
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VQSLOD
type: SiteQuality
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InbreedingCoeff
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DP
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ClippingRankSum
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MQ
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MQRankSum
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ReadPosRankSum
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QD
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BaseQRankSum
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FS
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele num: 66250
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Latino
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East Asian
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African
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European (Finnish)
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Other
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South Asian
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FS
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MQ
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ClippingRankSum
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InbreedingCoeff
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VQSLOD
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BaseQRankSum
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ReadPosRankSum
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MQRankSum
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QD
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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European (Finnish)
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Latino
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African
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Other
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European (Non-Finnish)
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allele num: 66250
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South Asian
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InbreedingCoeff
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BaseQRankSum
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ClippingRankSum
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SIO_000300: 3.59e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.25e-1

QD
type: SiteQuality
SIO_000300: 1.673e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.87e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 4.66e0

DP
type: SiteQuality
SIO_000300: 2.789097e6

MQ
type: SiteQuality
SIO_000300: 5.935e1

GenotypeQuality
all individuals: 216
bin: 5.25e1
variant carriers: 3

GenotypeQuality
all individuals: 8380
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 5562
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 73
bin: 7.5e0
variant carriers: 4

GenotypeQuality
all individuals: 6434
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4130
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14405
bin: 9.75e1
variant carriers: 4

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11504
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.561551025346319e-5
allele num: 66124
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10232
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 17
allele frequency: 2.778685845047401e-3
allele num: 6118
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16368
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8546
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.729e0

VQSLOD
type: SiteQuality
SIO_000300: -1.329e2

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.94e-1

FS
type: SiteQuality
SIO_000300: 1.69181e2

MQRankSum
type: SiteQuality
SIO_000300: 3.04e-1

MQ
type: SiteQuality
SIO_000300: 5.942e1

QD
type: SiteQuality
SIO_000300: 1.3e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.05e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.8e-3

DP
type: SiteQuality
SIO_000300: 2.786879e6

GenotypeQuality
all individuals: 4163
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4015
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 105
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5621
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 81
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13086
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 171
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 203
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2670
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10256
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.679048776254123e-5
allele num: 11522
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66282
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8564
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16384
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -3.268e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -3.767e0

MQ
type: SiteQuality
SIO_000300: 5.886e1

FS
type: SiteQuality
SIO_000300: 1.91163e2

MQRankSum
type: SiteQuality
SIO_000300: 5.1e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.08e0

DP
type: SiteQuality
SIO_000300: 2.749126e6

QD
type: SiteQuality
SIO_000300: 2.0e-2

GenotypeQuality
all individuals: 509
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8577
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 104
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4012
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14507
bin: 9.75e1
variant carriers: 9

GenotypeQuality
all individuals: 87
bin: 4.25e1
variant carriers: 0

Latino
type: Population
allele count: 4
allele frequency: 3.471017007983339e-4
allele num: 11524
num of homozygotes: 0

East Asian
type: Population
allele count: 3
allele frequency: 3.50385423966363e-4
allele num: 8562
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10258
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.016773259321829e-5
allele num: 66296
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16410
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.19e1

FS
type: SiteQuality
SIO_000300: 1.142e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.39e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

DP
type: SiteQuality
SIO_000300: 2.750407e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.06e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.72e0

MQRankSum
type: SiteQuality
SIO_000300: 5.81e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.99e-1

MQ
type: SiteQuality
SIO_000300: 5.978e1

GenotypeQuality
all individuals: 8
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 187
bin: 3.25e1
variant carriers: 1

GenotypeQuality
all individuals: 67
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6530
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13229
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8574
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 5.25e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.168224299065421e-4
allele num: 8560
num of homozygotes: 0

Latino
type: Population
allele count: 66
allele frequency: 5.727178063172509e-3
allele num: 11524
num of homozygotes: 2

South Asian
type: Population
allele count: 79
allele frequency: 4.808277541083384e-3
allele num: 16430
num of homozygotes: 1

Other
type: Population
allele count: 9
allele frequency: 9.933774834437087e-3
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 54
allele frequency: 8.174386920980926e-3
allele num: 6606
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 575
allele frequency: 8.67217664092664e-3
allele num: 66304
num of homozygotes: 2

African
type: Population
allele count: 24
allele frequency: 2.339181286549708e-3
allele num: 10260
num of homozygotes: 1

QD
type: SiteQuality
SIO_000300: 1.254e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.9e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -1.25e0

FS
type: SiteQuality
SIO_000300: 1.142e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.73e0

DP
type: SiteQuality
SIO_000300: 2.771357e6

MQ
type: SiteQuality
SIO_000300: 5.954e1

BaseQRankSum
type: SiteQuality
SIO_000300: 8.090000000000001e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.73e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.1e0

GenotypeQuality
all individuals: 2704
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 447
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 135
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13534
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8685
bin: 6.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16468
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8574
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

Latino
type: Population
allele count: 11
allele frequency: 9.543640465035572e-4
allele num: 11526
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.537612687309675e-5
allele num: 66334
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.103752759381898e-3
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 342
allele frequency: 3.328143246399377e-2
allele num: 10276
num of homozygotes: 2

QD
type: SiteQuality
SIO_000300: 1.591e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.1e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.17e-1

MQ
type: SiteQuality
SIO_000300: 5.941e1

VQSLOD
type: SiteQuality
SIO_000300: 1.55e0

FS
type: SiteQuality
SIO_000300: 1.842e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.009e0

MQRankSum
type: SiteQuality
SIO_000300: 1.94e-1

DP
type: SiteQuality
SIO_000300: 2.662419e6

ClippingRankSum
type: SiteQuality
SIO_000300: 3.19e-1

GenotypeQuality
all individuals: 406
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 123
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4248
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4108
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5753
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6682
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 100
bin: 3.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.73460537727667e-4
allele num: 11530
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16490
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10294
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66376
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.366e1

MQRankSum
type: SiteQuality
SIO_000300: 1.4e-2

VQSLOD
type: SiteQuality
SIO_000300: -8.711e0

MQ
type: SiteQuality
SIO_000300: 5.969e1

DP
type: SiteQuality
SIO_000300: 2.632707e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.37e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.11e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

FS
type: SiteQuality
SIO_000300: 4.092e1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.59e-1

GenotypeQuality
all individuals: 120
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13644
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4250
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5758
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4109
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 4.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11528
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10296
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16490
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.50665943470138e-5
allele num: 66372
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.89e1

VQSLOD
type: SiteQuality
SIO_000300: -4.595e0

DP
type: SiteQuality
SIO_000300: 2.631951e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 1.15e0

MQ
type: SiteQuality
SIO_000300: 5.935e1

MQRankSum
type: SiteQuality
SIO_000300: 3.58e0

FS
type: SiteQuality
SIO_000300: 1.7259e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.037e0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.14e0

GenotypeQuality
all individuals: 2718
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 99
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 114
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13801
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 32
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 410
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6685
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4109
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10296
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11530
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8580
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16488
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.50652324565368e-5
allele num: 66378
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.632525e6

BaseQRankSum
type: SiteQuality
SIO_000300: 5.5e0

VQSLOD
type: SiteQuality
SIO_000300: -2.901e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

FS
type: SiteQuality
SIO_000300: 1.7259e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.04e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.034e0

MQ
type: SiteQuality
SIO_000300: 5.935e1

QD
type: SiteQuality
SIO_000300: 1.884e1

MQRankSum
type: SiteQuality
SIO_000300: -1.986e0

GenotypeQuality
all individuals: 84
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 390
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5755
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 13757
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 123
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4103
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 5.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.506296318611797e-5
allele num: 66388
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10298
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16494
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8590
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11530
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6574
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.632335e6

FS
type: SiteQuality
SIO_000300: 1.39358e2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.3e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.732e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.96e-1

MQ
type: SiteQuality
SIO_000300: 5.963e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -8.891e1

MQRankSum
type: SiteQuality
SIO_000300: -8.33e-1

QD
type: SiteQuality
SIO_000300: 3.34e0

GenotypeQuality
all individuals: 41
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 74
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 115
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2716
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4255
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 373
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 111
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6690
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11532
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.506069459923492e-5
allele num: 66398
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8586
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10304
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16492
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.47e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

FS
type: SiteQuality
SIO_000300: 3.0846e1

MQRankSum
type: SiteQuality
SIO_000300: 9.71e-1

MQ
type: SiteQuality
SIO_000300: 5.861e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.991e0

DP
type: SiteQuality
SIO_000300: 2.631603e6

ClippingRankSum
type: SiteQuality
SIO_000300: 6.78e-1

QD
type: SiteQuality
SIO_000300: 1.066e1

VQSLOD
type: SiteQuality
SIO_000300: -6.517e0

GenotypeQuality
all individuals: 90
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4213
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 13438
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 138
bin: 4.75e1
variant carriers: 1

GenotypeQuality
all individuals: 8657
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2681
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10584
bin: 9.75e1
variant carriers: 29

GenotypeQuality
all individuals: 101
bin: 5.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 20
allele frequency: 3.206772703950744e-4
allele num: 62368
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11354
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8418
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 808
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16482
num of homozygotes: 0

African
type: Population
allele count: 5
allele frequency: 5.375188131584606e-4
allele num: 9302
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 8
allele frequency: 1.526717557251908e-3
allele num: 5240
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.886e1

FS
type: SiteQuality
SIO_000300: 2.97104e2

ClippingRankSum
type: SiteQuality
SIO_000300: 6.68e0

VQSLOD
type: SiteQuality
SIO_000300: -4.265e2

QD
type: SiteQuality
SIO_000300: 1.74e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.61e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.23e0

DP
type: SiteQuality
SIO_000300: 2.694731e6

MQRankSum
type: SiteQuality
SIO_000300: -2.16e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.224e0

GenotypeQuality
all individuals: 257
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2844
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11898
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 6984
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14375
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10334
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16498
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.503488092374308e-5
allele num: 66512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8608
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.086e0

FS
type: SiteQuality
SIO_000300: 5.22e-1

MQ
type: SiteQuality
SIO_000300: 5.914e1

DP
type: SiteQuality
SIO_000300: 2.401203e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.38e-1

QD
type: SiteQuality
SIO_000300: 1.239e1

MQRankSum
type: SiteQuality
SIO_000300: -1.841e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.799999999999999e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -6.818e0

GenotypeQuality
all individuals: 32
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2843
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6070
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14400
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4268
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11898
bin: 9.75e1
variant carriers: 7

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10336
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.513373805373565e-5
allele num: 66548
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.059871530723549e-5
allele num: 16502
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.656509695290859e-5
allele num: 11552
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.12e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.05e-1

MQ
type: SiteQuality
SIO_000300: 5.952e1

DP
type: SiteQuality
SIO_000300: 2.401361e6

QD
type: SiteQuality
SIO_000300: 1.262e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.722e0

MQRankSum
type: SiteQuality
SIO_000300: 1.94e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.5e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
all individuals: 40
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9136
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4511
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2844
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4268
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14340
bin: 6.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8608
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66538
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10338
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.059871530723549e-5
allele num: 16502
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.400614e6

VQSLOD
type: SiteQuality
SIO_000300: 1.19e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.55e-1

MQ
type: SiteQuality
SIO_000300: 5.982e1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.32e-1

FS
type: SiteQuality
SIO_000300: 2.159e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -3.386e0

MQRankSum
type: SiteQuality
SIO_000300: -2.98e-1

QD
type: SiteQuality
SIO_000300: 1.224e1

GenotypeQuality
all individuals: 5
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 239
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4511
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6073
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2844
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6980
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4268
bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8608
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10338
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66538
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.512401693889897e-4
allele num: 6612
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.159e0

DP
type: SiteQuality
SIO_000300: 2.400614e6

VQSLOD
type: SiteQuality
SIO_000300: 1.19e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.982e1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.32e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.386e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.55e-1

QD
type: SiteQuality
SIO_000300: 1.224e1

MQRankSum
type: SiteQuality
SIO_000300: -2.98e-1

GenotypeQuality
all individuals: 58
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4269
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6072
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9139
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2845
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10340
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.502629601803156e-5
allele num: 66550
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8602
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.41e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.59e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.023e-1

DP
type: SiteQuality
SIO_000300: 2.400542e6

MQRankSum
type: SiteQuality
SIO_000300: -1.197e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.43e0

MQ
type: SiteQuality
SIO_000300: 5.933e1

QD
type: SiteQuality
SIO_000300: 1.546e1

GenotypeQuality
all individuals: 9136
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11890
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 6984
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2844
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14381
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6072
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 3.75e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.671179883945841e-5
allele num: 10340
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8600
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.502448991856726e-5
allele num: 66558
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 4.27e0

MQRankSum
type: SiteQuality
SIO_000300: 1.47e0

VQSLOD
type: SiteQuality
SIO_000300: 2.0e-1

FS
type: SiteQuality
SIO_000300: 2.059e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.091e1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.79e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.31e0

DP
type: SiteQuality
SIO_000300: 2.400598e6

GenotypeQuality
all individuals: 2845
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6981
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9139
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14456
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6072
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11890
bin: 9.75e1
variant carriers: 10

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.676795045480937e-5
allele num: 10334
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.506534474988734e-5
allele num: 66570
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.731002250302925e-4
allele num: 11554
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8606
num of homozygotes: 0

South Asian
type: Population
allele count: 4
allele frequency: 2.423654871546292e-4
allele num: 16504
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.952e1

VQSLOD
type: SiteQuality
SIO_000300: 5.28e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.417e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.25e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.199999999999999e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -6.2e-2

DP
type: SiteQuality
SIO_000300: 2.401112e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

QD
type: SiteQuality
SIO_000300: 1.277e1

GenotypeQuality
all individuals: 11881
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 6073
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4271
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9142
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4511
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2848
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 4.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10310
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.212415130940834e-4
allele num: 16496
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.16144018583043e-4
allele num: 8610
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11544
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66542
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.66e-1

FS
type: SiteQuality
SIO_000300: 1.3641e1

DP
type: SiteQuality
SIO_000300: 2.399665e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.19e-1

MQRankSum
type: SiteQuality
SIO_000300: -8.55e-1

MQ
type: SiteQuality
SIO_000300: 5.976e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.003e0

VQSLOD
type: SiteQuality
SIO_000300: -1.997e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

QD
type: SiteQuality
SIO_000300: 1.255e1

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6980
bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
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variant carriers: 0

GenotypeQuality
all individuals: 14450
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11879
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2847
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.502584445245823e-5
allele num: 66552
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10310
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8606
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16496
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.57e-1

MQ
type: SiteQuality
SIO_000300: 5.966e1

VQSLOD
type: SiteQuality
SIO_000300: -3.73e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.57e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.105e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 3.13e-1

QD
type: SiteQuality
SIO_000300: 1.179e1

FS
type: SiteQuality
SIO_000300: 9.882999999999999e0

DP
type: SiteQuality
SIO_000300: 2.39939e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
all individuals: 2848
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8596
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11524
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16486
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.007971123477215e-5
allele num: 66490
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10276
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.353e1

MQRankSum
type: SiteQuality
SIO_000300: -3.5e-2

VQSLOD
type: SiteQuality
SIO_000300: 9.22e-1

DP
type: SiteQuality
SIO_000300: 2.397643e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.56e0

FS
type: SiteQuality
SIO_000300: 4.895e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.7e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 1.18e0

MQ
type: SiteQuality
SIO_000300: 5.918e1

GenotypeQuality
all individuals: 11876
bin: 9.75e1
variant carriers: 3

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 72
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16488
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66484
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 2.602811035918792e-4
allele num: 11526
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8596
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10274
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.397454e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

FS
type: SiteQuality
SIO_000300: 1.993e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.64e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.911e0

QD
type: SiteQuality
SIO_000300: 1.169e1

MQ
type: SiteQuality
SIO_000300: 5.951e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.11e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.01e0

MQRankSum
type: SiteQuality
SIO_000300: 1.85e-1

GenotypeQuality
all individuals: 9111
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 5.25e1
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GenotypeQuality
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GenotypeQuality
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variant carriers: 5

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 9
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variant carriers: 0

GenotypeQuality
all individuals: 2848
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.517936206740761e-5
allele num: 66402
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.103752759381898e-3
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16470
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11514
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10258
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.164415463437354e-4
allele num: 8588
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.98e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -2.289e0

MQRankSum
type: SiteQuality
SIO_000300: -6.04e-1

FS
type: SiteQuality
SIO_000300: 6.36e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.9e-2

QD
type: SiteQuality
SIO_000300: 1.25e1

VQSLOD
type: SiteQuality
SIO_000300: 1.8e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.21e-1

DP
type: SiteQuality
SIO_000300: 2.394776e6

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 11873
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variant carriers: 4

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 125
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GenotypeQuality
all individuals: 9097
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16468
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10250
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.027909219687151e-5
allele num: 66358
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11506
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.21e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

FS
type: SiteQuality
SIO_000300: 8.56e-1

DP
type: SiteQuality
SIO_000300: 2.39278e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.203e0

MQRankSum
type: SiteQuality
SIO_000300: 7.12e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.35e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 1.7e0

QD
type: SiteQuality
SIO_000300: 1.192e1

GenotypeQuality
all individuals: 13
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9085
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variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
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variant carriers: 0

GenotypeQuality
all individuals: 14
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 4512
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6969
bin: 7.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11498
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.075334143377886e-5
allele num: 16460
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66304
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10224
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8558
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.392e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.95e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.1e-1

QD
type: SiteQuality
SIO_000300: 1.864e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.839e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQ
type: SiteQuality
SIO_000300: 6.022e1

VQSLOD
type: SiteQuality
SIO_000300: 7.77e-1

DP
type: SiteQuality
SIO_000300: 2.390199e6

GenotypeQuality
all individuals: 10
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variant carriers: 0

GenotypeQuality
all individuals: 45
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variant carriers: 0

GenotypeQuality
all individuals: 13706
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variant carriers: 0

GenotypeQuality
all individuals: 24
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variant carriers: 0

GenotypeQuality
all individuals: 11867
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 2843
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6065
bin: 8.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16452
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11486
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10206
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8550
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.509661835748792e-5
allele num: 66240
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.956e1

FS
type: SiteQuality
SIO_000300: 3.737e0

MQRankSum
type: SiteQuality
SIO_000300: 1.66e0

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -3.406e0

DP
type: SiteQuality
SIO_000300: 2.387478e6

QD
type: SiteQuality
SIO_000300: 1.093e1

VQSLOD
type: SiteQuality
SIO_000300: 2.58e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.21e-1

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 2

GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 4512
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.510254628930438e-5
allele num: 66214
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16448
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11490
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
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African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10204
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.170686022008897e-4
allele num: 8542
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.418e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 8.87e-1

VQSLOD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 2.385267e6

QD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 1.25e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.1e0

MQ
type: SiteQuality
SIO_000300: 5.968e1

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 29
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variant carriers: 0

GenotypeQuality
all individuals: 215
bin: 3.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66190
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10200
num of homozygotes: 0

South Asian
type: Population
allele count: 13
allele frequency: 7.904657667517937e-4
allele num: 16446
num of homozygotes: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.706251088281386e-5
allele num: 11486
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8542
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.38e-1

MQ
type: SiteQuality
SIO_000300: 5.941e1

MQRankSum
type: SiteQuality
SIO_000300: -7.8e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -4.341e0

DP
type: SiteQuality
SIO_000300: 2.384743e6

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -2.356e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.16e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.64e-2

QD
type: SiteQuality
SIO_000300: 1.4e1

GenotypeQuality
all individuals: 6965
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4510
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 19
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GenotypeQuality
all individuals: 9020
bin: 6.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16448
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11484
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10200
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.510710940568632e-5
allele num: 66194
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8540
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.941e1

FS
type: SiteQuality
SIO_000300: 1.858e0

MQRankSum
type: SiteQuality
SIO_000300: 4.92e-1

DP
type: SiteQuality
SIO_000300: 2.383782e6

BaseQRankSum
type: SiteQuality
SIO_000300: -9.18e-1

QD
type: SiteQuality
SIO_000300: 1.354e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.84e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 6.879999999999999e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.11e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
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GenotypeQuality
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bin: 6.75e1
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GenotypeQuality
all individuals: 246
bin: 2.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11484
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8540
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16448
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10200
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.021421881137263e-5
allele num: 66194
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -9.18e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.92e-1

MQ
type: SiteQuality
SIO_000300: 5.941e1

FS
type: SiteQuality
SIO_000300: 1.858e0

QD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 7.11e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.84e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.879999999999999e-1

DP
type: SiteQuality
SIO_000300: 2.383782e6

GenotypeQuality
all individuals: 246
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4238
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 27
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variant carriers: 0

GenotypeQuality
all individuals: 2840
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6965
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11861
bin: 9.75e1
variant carriers: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10200
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66194
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.079766536964981e-5
allele num: 16448
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11484
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8540
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.383782e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.84e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.92e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -9.18e-1

FS
type: SiteQuality
SIO_000300: 1.858e0

VQSLOD
type: SiteQuality
SIO_000300: 6.879999999999999e-1

QD
type: SiteQuality
SIO_000300: 1.354e1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.11e-1

MQ
type: SiteQuality
SIO_000300: 5.941e1

GenotypeQuality
all individuals: 48
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 293
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8984
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11857
bin: 9.75e1
variant carriers: 1

East Asian
type: Population
allele count: 1
allele frequency: 1.17096018735363e-4
allele num: 8540
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16442
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11478
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10188
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66138
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.380084e6

ClippingRankSum
type: SiteQuality
SIO_000300: -2.1e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -3.604e0

MQ
type: SiteQuality
SIO_000300: 5.934e1

MQRankSum
type: SiteQuality
SIO_000300: 7.99e-1

FS
type: SiteQuality
SIO_000300: 1.1203e1

VQSLOD
type: SiteQuality
SIO_000300: -1.45e0

QD
type: SiteQuality
SIO_000300: 1.607e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.0e-2

GenotypeQuality
all individuals: 2840
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 4506
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variant carriers: 0

GenotypeQuality
all individuals: 11855
bin: 9.75e1
variant carriers: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11478
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.511898642315019e-5
allele num: 66142
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16440
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10182
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8540
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.92e-1

QD
type: SiteQuality
SIO_000300: 1.249e1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -2.14e-1

MQ
type: SiteQuality
SIO_000300: 5.921e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.25e-1

DP
type: SiteQuality
SIO_000300: 2.379952e6

BaseQRankSum
type: SiteQuality
SIO_000300: -5.918e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.11e-1

GenotypeQuality
all individuals: 107
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6061
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 175
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4229
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 375
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 4.25e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.832841691248771e-5
allele num: 10170
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66084
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16438
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11464
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8532
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.32e0

MQ
type: SiteQuality
SIO_000300: 6.05e1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.38e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.03e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.45e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.48e-1

FS
type: SiteQuality
SIO_000300: 1.142e0

DP
type: SiteQuality
SIO_000300: 2.373984e6

QD
type: SiteQuality
SIO_000300: 1.131e1

GenotypeQuality
all individuals: 239
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8841
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4499
bin: 9.25e1
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GenotypeQuality
all individuals: 11847
bin: 9.75e1
variant carriers: 18

GenotypeQuality
all individuals: 6937
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2833
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 16
allele frequency: 2.423140996516735e-4
allele num: 66030
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10154
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8518
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.726003490401397e-5
allele num: 11460
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.084205402774397e-5
allele num: 16436
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.367575e6

BaseQRankSum
type: SiteQuality
SIO_000300: -7.13e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.82e-1

MQ
type: SiteQuality
SIO_000300: 5.943e1

QD
type: SiteQuality
SIO_000300: 1.403e1

MQRankSum
type: SiteQuality
SIO_000300: 4.8e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.14e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.0e-1

GenotypeQuality
all individuals: 8245
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 282
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11048
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 147
bin: 5.25e1
variant carriers: 1

GenotypeQuality
all individuals: 5989
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2801
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 707
bin: 3.75e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.8833761612967e-5
allele num: 10118
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 11
allele frequency: 1.669753180120829e-4
allele num: 65878
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.176747469992939e-4
allele num: 8498
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11432
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.106497313141182e-5
allele num: 16376
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.58e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.9e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -4.6e-2

MQRankSum
type: SiteQuality
SIO_000300: 6.48e-1

QD
type: SiteQuality
SIO_000300: 1.015e1

VQSLOD
type: SiteQuality
SIO_000300: 5.02e0

MQ
type: SiteQuality
SIO_000300: 6.021e1

DP
type: SiteQuality
SIO_000300: 2.337999e6

GenotypeQuality
all individuals: 8245
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 107
bin: 1.25e1
variant carriers: 1

GenotypeQuality
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bin: 6.25e1
variant carriers: 1

GenotypeQuality
all individuals: 5989
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1130
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 282
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variant carriers: 0

GenotypeQuality
all individuals: 4448
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.176747469992939e-4
allele num: 8498
num of homozygotes: 0

African
type: Population
allele count: 8
allele frequency: 7.90670092903736e-4
allele num: 10118
num of homozygotes: 0

Latino
type: Population
allele count: 30
allele frequency: 2.624212736179146e-3
allele num: 11432
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.116071428571429e-3
allele num: 896
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 10
allele frequency: 1.517957436473481e-4
allele num: 65878
num of homozygotes: 0

South Asian
type: Population
allele count: 25
allele frequency: 1.526624328285296e-3
allele num: 16376
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 6.48e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 5.02e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.6e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.9e-3

DP
type: SiteQuality
SIO_000300: 2.337999e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.58e-1

MQ
type: SiteQuality
SIO_000300: 6.021e1

QD
type: SiteQuality
SIO_000300: 1.015e1

African
type: Population
allele count: 1
allele frequency: 9.8833761612967e-5
allele num: 10118
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8498
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 5.02e0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.021e1

DP
type: SiteQuality
SIO_000300: 2.337999e6

QD
type: SiteQuality
SIO_000300: 1.015e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.58e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.48e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.9e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -4.6e-2

GenotypeQuality
all individuals: 443
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3746
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2823
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variant carriers: 0

GenotypeQuality
all individuals: 2199
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GenotypeQuality
all individuals: 13928
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variant carriers: 0

GenotypeQuality
all individuals: 256
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4259
bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65114
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16350
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11360
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9948
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.220107369448512e-4
allele num: 8196
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6556
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.3e-1

FS
type: SiteQuality
SIO_000300: 5.747e0

DP
type: SiteQuality
SIO_000300: 2.047932e6

VQSLOD
type: SiteQuality
SIO_000300: 1.77e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.5e-3

BaseQRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.196e1

MQRankSum
type: SiteQuality
SIO_000300: -2.0e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.69e-1

GenotypeQuality
all individuals: 443
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 256
bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 4402
bin: 4.75e1
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GenotypeQuality
all individuals: 3746
bin: 3.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6556
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16350
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.071536075191203e-5
allele num: 65114
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9948
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11360
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8196
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.3e-1

DP
type: SiteQuality
SIO_000300: 2.047932e6

FS
type: SiteQuality
SIO_000300: 5.747e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.642e0

VQSLOD
type: SiteQuality
SIO_000300: 1.77e0

QD
type: SiteQuality
SIO_000300: 1.196e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.5e-3

MQRankSum
type: SiteQuality
SIO_000300: -2.0e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.69e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1545
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variant carriers: 0

GenotypeQuality
all individuals: 1695
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5324
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 40960
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 530
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5052
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11680
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2862
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.7e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -3.22e-1

DP
type: SiteQuality
SIO_000300: 8.43372e5

VQSLOD
type: SiteQuality
SIO_000300: 1.94e0

QD
type: SiteQuality
SIO_000300: 1.146e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 6.840000000000001e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.56e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.22e-1

GenotypeQuality
all individuals: 441
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7673
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GenotypeQuality
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GenotypeQuality
all individuals: 223
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GenotypeQuality
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GenotypeQuality
all individuals: 320
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GenotypeQuality
all individuals: 716
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 1.516990291262136e-4
allele num: 6592
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5044
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 40880
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11634
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5292
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2856
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 530
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -1.449e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.26e0

QD
type: SiteQuality
SIO_000300: 1.382e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.33e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.855e0

MQRankSum
type: SiteQuality
SIO_000300: -1.256e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.1e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 8.44596e5

GenotypeQuality
all individuals: 2377
bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 219
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variant carriers: 0

GenotypeQuality
all individuals: 1817
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5516
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6750
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5164
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 41952
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3012
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 550
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 8.464533604198409e-5
allele num: 11814
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.9e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.35e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 8.91055e5

BaseQRankSum
type: SiteQuality
SIO_000300: -1.12e0

VQSLOD
type: SiteQuality
SIO_000300: -8.23e-2

MQRankSum
type: SiteQuality
SIO_000300: -5.35e-1

QD
type: SiteQuality
SIO_000300: 1.73e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.33e-1

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 4

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

South Asian
type: Population
allele count: 4
allele frequency: 3.372112628561794e-4
allele num: 11862
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5586
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 552
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3036
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5208
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6830
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 42380
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -4.53e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.09e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.64e-1

FS
type: SiteQuality
SIO_000300: 4.428e0

QD
type: SiteQuality
SIO_000300: 1.302e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.66e0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.3e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.7e-3

DP
type: SiteQuality
SIO_000300: 9.01432e5

GenotypeQuality
all individuals: 844
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 4682
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variant carriers: 0

GenotypeQuality
all individuals: 1442
bin: 9.75e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 44560
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.412429378531073e-4
allele num: 7080
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3184
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12106
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6070
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5550
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 578
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.537e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.71e0

QD
type: SiteQuality
SIO_000300: 1.159e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.353e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.6e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.02e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.3e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 9.73583e5

GenotypeQuality
all individuals: 2275
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1442
bin: 9.75e1
variant carriers: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7248
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5718
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 45910
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3274
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 590
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6434
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 8.135372600065082e-5
allele num: 12292
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.3e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.35e-1

MQRankSum
type: SiteQuality
SIO_000300: -9.53e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.856e-1

QD
type: SiteQuality
SIO_000300: 8.91e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.017744e6

ClippingRankSum
type: SiteQuality
SIO_000300: 5.28e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.214e0

GenotypeQuality
all individuals: 1443
bin: 9.75e1
variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 317
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variant carriers: 0

GenotypeQuality
all individuals: 672
bin: 7.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12420
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 602
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7384
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6740
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5896
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3354
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.121340687314383e-5
allele num: 47140
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.047238e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.26e0

QD
type: SiteQuality
SIO_000300: 1.07e1

MQRankSum
type: SiteQuality
SIO_000300: 3.36e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.4e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 1.03e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.2e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.7e-1

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 560
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variant carriers: 0

GenotypeQuality
all individuals: 806
bin: 7.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13364
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 682
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4032
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8502
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8266
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.816398445162931e-5
allele num: 55054
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7110
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.210814e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.02e0

MQ
type: SiteQuality
SIO_000300: 5.477e1

VQSLOD
type: SiteQuality
SIO_000300: -2.705e0

MQRankSum
type: SiteQuality
SIO_000300: -2.793e0

FS
type: SiteQuality
SIO_000300: 1.3752e1

QD
type: SiteQuality
SIO_000300: 2.23e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.46e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 1.0e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4518
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7720
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8876
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9682
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 730
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 59566
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 2.130681818181818e-4
allele num: 14080
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 9.379999999999999e-1

QD
type: SiteQuality
SIO_000300: 1.227e1

MQRankSum
type: SiteQuality
SIO_000300: -1.357e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.98e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.15e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.4e-3

VQSLOD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 1.09e0

MQ
type: SiteQuality
SIO_000300: 5.895e1

DP
type: SiteQuality
SIO_000300: 1.296233e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 2

East Asian
type: Population
allele count: 2
allele frequency: 2.496878901373283e-4
allele num: 8010
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14466
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 758
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4706
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 61354
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9130
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10192
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.895e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -2.92e-1

FS
type: SiteQuality
SIO_000300: 2.448e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.1e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.56e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.76e-1

VQSLOD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.333771e6

QD
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4794
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14702
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 774
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9292
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 62262
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10474
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East Asian
type: Population
allele count: 1
allele frequency: 1.230920728705071e-4
allele num: 8124
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.0e-4

QD
type: SiteQuality
SIO_000300: 1.279e1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.84e-1

DP
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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FS
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.951e1

ReadPosRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 14702
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4794
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8124
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9292
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.60611609007099e-5
allele num: 62262
num of homozygotes: 0

Latino
type: Population
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allele frequency: 0.0e0
allele num: 10474
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.951e1

BaseQRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.354396e6

ReadPosRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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MQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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FS
type: SiteQuality
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QD
type: SiteQuality
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ClippingRankSum
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SIO_000300: 7.84e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1445
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 950
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 232
bin: 8.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 782
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14774
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4842
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9332
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10510
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.229407425620851e-4
allele num: 8134
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62442
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.21e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.99e-1

MQ
type: SiteQuality
SIO_000300: 5.951e1

QD
type: SiteQuality
SIO_000300: 1.088e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 1.15e0

VQSLOD
type: SiteQuality
SIO_000300: 4.15e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.52e0

DP
type: SiteQuality
SIO_000300: 1.359684e6

FS
type: SiteQuality
SIO_000300: 2.508e0

GenotypeQuality
all individuals: 592
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 74
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 43615
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 582
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1445
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 328
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 131
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 395
bin: 5.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62508
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.750371270419872e-5
allele num: 14814
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9362
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8162
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10536
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 782
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4872
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.73e0

VQSLOD
type: SiteQuality
SIO_000300: -4.89e-1

QD
type: SiteQuality
SIO_000300: 9.02e0

MQ
type: SiteQuality
SIO_000300: 5.936e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.398e0

FS
type: SiteQuality
SIO_000300: 2.039e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -6.820000000000001e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.84e-1

DP
type: SiteQuality
SIO_000300: 1.361527e6

GenotypeQuality
all individuals: 56
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5901
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 232
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 327
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1445
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 474
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 531
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 311
bin: 4.75e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.222792858889704e-4
allele num: 8178
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14820
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4882
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10538
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 788
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9352
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.599078930536011e-5
allele num: 62536
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -6.1e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 9.69e-1

DP
type: SiteQuality
SIO_000300: 1.364127e6

ClippingRankSum
type: SiteQuality
SIO_000300: -9.98e-1

MQ
type: SiteQuality
SIO_000300: 5.925e1

QD
type: SiteQuality
SIO_000300: 9.75e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.6e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.1e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.4e-1

GenotypeQuality
all individuals: 587
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 191
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 569
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 380
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 322
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 349
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 587
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10510
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14782
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8136
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.608648092143363e-5
allele num: 62164
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4828
num of homozygotes: 0

African
type: Population
allele count: 35
allele frequency: 3.765060240963855e-3
allele num: 9296
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 782
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -2.31e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 3.17e0

QD
type: SiteQuality
SIO_000300: 1.189e1

BaseQRankSum
type: SiteQuality
SIO_000300: -8.55e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.357151e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.4e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.07e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.33e-1

GenotypeQuality
all individuals: 3577
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 662
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 307
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7611
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 923
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 917
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41365
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 634
bin: 5.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 778
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14666
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4766
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8036
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.086720278200391e-4
allele num: 9202
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10386
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 61630
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.34503e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.3e-3

VQSLOD
type: SiteQuality
SIO_000300: 1.56e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.02e0

MQRankSum
type: SiteQuality
SIO_000300: -3.1e-2

FS
type: SiteQuality
SIO_000300: 1.426e0

QD
type: SiteQuality
SIO_000300: 1.204e1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.23e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.77e-1

GenotypeQuality
all individuals: 675
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 692
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 598
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 565
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 225
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 319
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 908
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 910
bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8024
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 770
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9202
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.625117821042025e-5
allele num: 61534
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4740
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14662
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10346
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.41e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 4.7e0

MQRankSum
type: SiteQuality
SIO_000300: -9.16e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.314e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.11e-1

DP
type: SiteQuality
SIO_000300: 1.341671e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.3e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.11e-1