2-32396358-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32396358
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 32396358
    reference: chr 2
allele count: 1
allele frequency: 8.250416646040625e-6
allele num: 121206
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000399005
  ensembl transcript: ENST00000435660
  gene symbol: SLC30A6
  hgvsc: ENST00000435660.1:c.6G>T
  hgvsp: ENST00000435660.1:c.6G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000440678
  ensembl transcript: ENST00000538303
  gene symbol: SLC30A6
  hgvsc: ENST00000538303.1:c.4-2774G>T
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000282587
  ensembl transcript: ENST00000282587
  gene symbol: SLC30A6
  hgvsc: ENST00000282587.5:c.6G>T
  hgvsp: ENST00000282587.5:c.6G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000415790
  ensembl transcript: ENST00000454324
  gene symbol: SLC30A6
  hgvsc: ENST00000454324.1:c.6G>T
  hgvsp: ENST00000454324.1:c.6G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000396634
  ensembl transcript: ENST00000457724
  gene symbol: SLC30A6
  hgvsc: ENST00000457724.1:c.6G>T
  hgvsp: ENST00000457724.1:c.6G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000349563
  ensembl transcript: ENST00000357055
  gene symbol: SLC30A6
  hgvsc: ENST00000357055.3:c.-569G>T
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000388013
  ensembl transcript: ENST00000449777
  gene symbol: SLC30A6
  hgvsc: ENST00000449777.1:c.6G>T
  hgvsp: ENST00000449777.1:c.6G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000393946
  ensembl transcript: ENST00000440718
  gene symbol: SLC30A6
  hgvsc: ENST00000440718.1:c.4-2774G>T
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000368648
  ensembl transcript: ENST00000379343
  gene symbol: SLC30A6
  hgvsc: ENST00000379343.2:c.6G>T
  hgvsp: ENST00000379343.2:c.6G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000384041
  ensembl transcript: ENST00000406369
  gene symbol: SLC30A6
  hgvsc: ENST00000406369.1:c.-5+5386G>T
  variant of: http://identifiers.org/hgnc/19305
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3238
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1177
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 597
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 958
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1578
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17469
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8489
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24851
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 516
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.6G>T
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Latino
population: African
population: Other
population: European (Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD

2-32396359-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32396359
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 32396359
    reference: chr 2
allele count: 1
allele frequency: 8.249599894405122e-6
allele num: 121218
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000388013
  ensembl transcript: ENST00000449777
  gene symbol: SLC30A6
  hgvsc: ENST00000449777.1:c.7A>T
  hgvsp: ENSP00000388013.1:p.Thr3Ser
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000384041
  ensembl transcript: ENST00000406369
  gene symbol: SLC30A6
  hgvsc: ENST00000406369.1:c.-5+5387A>T
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000415790
  ensembl transcript: ENST00000454324
  gene symbol: SLC30A6
  hgvsc: ENST00000454324.1:c.7A>T
  hgvsp: ENSP00000415790.1:p.Thr3Ser
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000399005
  ensembl transcript: ENST00000435660
  gene symbol: SLC30A6
  hgvsc: ENST00000435660.1:c.7A>T
  hgvsp: ENSP00000399005.1:p.Thr3Ser
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000282587
  ensembl transcript: ENST00000282587
  gene symbol: SLC30A6
  hgvsc: ENST00000282587.5:c.7A>T
  hgvsp: ENSP00000282587.5:p.Thr3Ser
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000396634
  ensembl transcript: ENST00000457724
  gene symbol: SLC30A6
  hgvsc: ENST00000457724.1:c.7A>T
  hgvsp: ENSP00000396634.1:p.Thr3Ser
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000393946
  ensembl transcript: ENST00000440718
  gene symbol: SLC30A6
  hgvsc: ENST00000440718.1:c.4-2773A>T
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000440678
  ensembl transcript: ENST00000538303
  gene symbol: SLC30A6
  hgvsc: ENST00000538303.1:c.4-2773A>T
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000368648
  ensembl transcript: ENST00000379343
  gene symbol: SLC30A6
  hgvsc: ENST00000379343.2:c.7A>T
  hgvsp: ENSP00000368648.2:p.Thr3Ser
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000349563
  ensembl transcript: ENST00000357055
  gene symbol: SLC30A6
  hgvsc: ENST00000357055.3:c.-568A>T
  variant of: http://identifiers.org/hgnc/19305
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 958
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3236
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17479
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24858
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 516
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 597
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1578
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1177
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8492
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2568
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Thr3Ser
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: South Asian
population: European (Finnish)
population: East Asian
population: Other
reference allele: A
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: DP

2-32396362-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32396362
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 32396362
    reference: chr 2
allele count: 3
allele frequency: 2.474267616785431e-5
allele num: 121248
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000282587
  ensembl transcript: ENST00000282587
  gene symbol: SLC30A6
  hgvsc: ENST00000282587.5:c.10A>T
  hgvsp: ENSP00000282587.5:p.Ile4Phe
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000396634
  ensembl transcript: ENST00000457724
  gene symbol: SLC30A6
  hgvsc: ENST00000457724.1:c.10A>T
  hgvsp: ENSP00000396634.1:p.Ile4Phe
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000393946
  ensembl transcript: ENST00000440718
  gene symbol: SLC30A6
  hgvsc: ENST00000440718.1:c.4-2770A>T
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000440678
  ensembl transcript: ENST00000538303
  gene symbol: SLC30A6
  hgvsc: ENST00000538303.1:c.4-2770A>T
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000399005
  ensembl transcript: ENST00000435660
  gene symbol: SLC30A6
  hgvsc: ENST00000435660.1:c.10A>T
  hgvsp: ENSP00000399005.1:p.Ile4Phe
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000349563
  ensembl transcript: ENST00000357055
  gene symbol: SLC30A6
  hgvsc: ENST00000357055.3:c.-565A>T
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000415790
  ensembl transcript: ENST00000454324
  gene symbol: SLC30A6
  hgvsc: ENST00000454324.1:c.10A>T
  hgvsp: ENSP00000415790.1:p.Ile4Phe
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000368648
  ensembl transcript: ENST00000379343
  gene symbol: SLC30A6
  hgvsc: ENST00000379343.2:c.10A>T
  hgvsp: ENSP00000368648.2:p.Ile4Phe
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000388013
  ensembl transcript: ENST00000449777
  gene symbol: SLC30A6
  hgvsc: ENST00000449777.1:c.10A>T
  hgvsp: ENSP00000388013.1:p.Ile4Phe
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000384041
  ensembl transcript: ENST00000406369
  gene symbol: SLC30A6
  hgvsc: ENST00000406369.1:c.-5+5390A>T
  variant of: http://identifiers.org/hgnc/19305
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17508
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 958
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 597
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24863
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8499
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3233
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 516
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1579
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1177
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 807
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Ile4Phe
num of homozygotes: 0
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: South Asian
population: Latino
population: East Asian
reference allele: A
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum

2-32396365-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32396365
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 32396365
    reference: chr 2
allele count: 1
allele frequency: 8.246742536698004e-6
allele num: 121260
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000415790
  ensembl transcript: ENST00000454324
  gene symbol: SLC30A6
  hgvsc: ENST00000454324.1:c.13C>T
  hgvsp: ENSP00000415790.1:p.His5Tyr
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000399005
  ensembl transcript: ENST00000435660
  gene symbol: SLC30A6
  hgvsc: ENST00000435660.1:c.13C>T
  hgvsp: ENSP00000399005.1:p.His5Tyr
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000388013
  ensembl transcript: ENST00000449777
  gene symbol: SLC30A6
  hgvsc: ENST00000449777.1:c.13C>T
  hgvsp: ENSP00000388013.1:p.His5Tyr
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000349563
  ensembl transcript: ENST00000357055
  gene symbol: SLC30A6
  hgvsc: ENST00000357055.3:c.-562C>T
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000393946
  ensembl transcript: ENST00000440718
  gene symbol: SLC30A6
  hgvsc: ENST00000440718.1:c.4-2767C>T
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000368648
  ensembl transcript: ENST00000379343
  gene symbol: SLC30A6
  hgvsc: ENST00000379343.2:c.13C>T
  hgvsp: ENSP00000368648.2:p.His5Tyr
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000282587
  ensembl transcript: ENST00000282587
  gene symbol: SLC30A6
  hgvsc: ENST00000282587.5:c.13C>T
  hgvsp: ENSP00000282587.5:p.His5Tyr
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000396634
  ensembl transcript: ENST00000457724
  gene symbol: SLC30A6
  hgvsc: ENST00000457724.1:c.13C>T
  hgvsp: ENSP00000396634.1:p.His5Tyr
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000384041
  ensembl transcript: ENST00000406369
  gene symbol: SLC30A6
  hgvsc: ENST00000406369.1:c.-5+5393C>T
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000440678
  ensembl transcript: ENST00000538303
  gene symbol: SLC30A6
  hgvsc: ENST00000538303.1:c.4-2767C>T
  variant of: http://identifiers.org/hgnc/19305
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 516
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17539
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 596
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 959
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24856
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8497
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3239
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1177
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1578
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
hgvs: p.His5Tyr
num of homozygotes: 0
population: South Asian
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Other
reference allele: C
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD

2-32396370-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32396370
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 32396370
    reference: chr 2
allele count: 1
allele frequency: 8.245246615326264e-6
allele num: 121282
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000393946
  ensembl transcript: ENST00000440718
  gene symbol: SLC30A6
  hgvsc: ENST00000440718.1:c.4-2762C>G
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000440678
  ensembl transcript: ENST00000538303
  gene symbol: SLC30A6
  hgvsc: ENST00000538303.1:c.4-2762C>G
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000384041
  ensembl transcript: ENST00000406369
  gene symbol: SLC30A6
  hgvsc: ENST00000406369.1:c.-5+5398C>G
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000396634
  ensembl transcript: ENST00000457724
  gene symbol: SLC30A6
  hgvsc: ENST00000457724.1:c.18C>G
  hgvsp: ENST00000457724.1:c.18C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000399005
  ensembl transcript: ENST00000435660
  gene symbol: SLC30A6
  hgvsc: ENST00000435660.1:c.18C>G
  hgvsp: ENST00000435660.1:c.18C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000388013
  ensembl transcript: ENST00000449777
  gene symbol: SLC30A6
  hgvsc: ENST00000449777.1:c.18C>G
  hgvsp: ENST00000449777.1:c.18C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000282587
  ensembl transcript: ENST00000282587
  gene symbol: SLC30A6
  hgvsc: ENST00000282587.5:c.18C>G
  hgvsp: ENST00000282587.5:c.18C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000415790
  ensembl transcript: ENST00000454324
  gene symbol: SLC30A6
  hgvsc: ENST00000454324.1:c.18C>G
  hgvsp: ENST00000454324.1:c.18C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000349563
  ensembl transcript: ENST00000357055
  gene symbol: SLC30A6
  hgvsc: ENST00000357055.3:c.-557C>G
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000368648
  ensembl transcript: ENST00000379343
  gene symbol: SLC30A6
  hgvsc: ENST00000379343.2:c.18C>G
  hgvsp: ENST00000379343.2:c.18C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19305
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24866
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17563
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3234
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 516
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 958
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8500
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1178
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1579
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 595
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Leu6Leu
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: Other
population: East Asian
population: African
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD

http://identifiers.org/exac.variant/2-32396374-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32396374
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 32396374
    reference: chr 2
allele count: 13
allele frequency: 1.071687660753149e-4
allele num: 121304
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000388013
  ensembl transcript: ENST00000449777
  gene symbol: SLC30A6
  hgvsc: ENST00000449777.1:c.22C>A
  hgvsp: ENST00000449777.1:c.22C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000415790
  ensembl transcript: ENST00000454324
  gene symbol: SLC30A6
  hgvsc: ENST00000454324.1:c.22C>A
  hgvsp: ENST00000454324.1:c.22C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000368648
  ensembl transcript: ENST00000379343
  gene symbol: SLC30A6
  hgvsc: ENST00000379343.2:c.22C>A
  hgvsp: ENST00000379343.2:c.22C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000393946
  ensembl transcript: ENST00000440718
  gene symbol: SLC30A6
  hgvsc: ENST00000440718.1:c.4-2758C>A
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000396634
  ensembl transcript: ENST00000457724
  gene symbol: SLC30A6
  hgvsc: ENST00000457724.1:c.22C>A
  hgvsp: ENST00000457724.1:c.22C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000440678
  ensembl transcript: ENST00000538303
  gene symbol: SLC30A6
  hgvsc: ENST00000538303.1:c.4-2758C>A
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000282587
  ensembl transcript: ENST00000282587
  gene symbol: SLC30A6
  hgvsc: ENST00000282587.5:c.22C>A
  hgvsp: ENST00000282587.5:c.22C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000349563
  ensembl transcript: ENST00000357055
  gene symbol: SLC30A6
  hgvsc: ENST00000357055.3:c.-553C>A
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000399005
  ensembl transcript: ENST00000435660
  gene symbol: SLC30A6
  hgvsc: ENST00000435660.1:c.22C>A
  hgvsp: ENST00000435660.1:c.22C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000384041
  ensembl transcript: ENST00000406369
  gene symbol: SLC30A6
  hgvsc: ENST00000406369.1:c.-5+5402C>A
  variant of: http://identifiers.org/hgnc/19305
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3239
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1180
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8501
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17584
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24848
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1580
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 958
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 6047
  bin: 9.75e1
  variant carriers: 13
hgvs: p.Arg8Arg
num of homozygotes: 0
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: East Asian
population: Latino
population: African
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP

2-32396374-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32396374
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 32396374
    reference: chr 2
allele count: 1
allele frequency: 8.243751236562685e-6
allele num: 121304
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000399005
  ensembl transcript: ENST00000435660
  gene symbol: SLC30A6
  hgvsc: ENST00000435660.1:c.22C>T
  hgvsp: ENSP00000399005.1:p.Arg8Ter
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: stop_gained
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000415790
  ensembl transcript: ENST00000454324
  gene symbol: SLC30A6
  hgvsc: ENST00000454324.1:c.22C>T
  hgvsp: ENSP00000415790.1:p.Arg8Ter
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000393946
  ensembl transcript: ENST00000440718
  gene symbol: SLC30A6
  hgvsc: ENST00000440718.1:c.4-2758C>T
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: stop_gained
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000388013
  ensembl transcript: ENST00000449777
  gene symbol: SLC30A6
  hgvsc: ENST00000449777.1:c.22C>T
  hgvsp: ENSP00000388013.1:p.Arg8Ter
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: stop_gained
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000396634
  ensembl transcript: ENST00000457724
  gene symbol: SLC30A6
  hgvsc: ENST00000457724.1:c.22C>T
  hgvsp: ENSP00000396634.1:p.Arg8Ter
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000282587
  ensembl transcript: ENST00000282587
  gene symbol: SLC30A6
  hgvsc: ENST00000282587.5:c.22C>T
  hgvsp: ENSP00000282587.5:p.Arg8Ter
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000384041
  ensembl transcript: ENST00000406369
  gene symbol: SLC30A6
  hgvsc: ENST00000406369.1:c.-5+5402C>T
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000368648
  ensembl transcript: ENST00000379343
  gene symbol: SLC30A6
  hgvsc: ENST00000379343.2:c.22C>T
  hgvsp: ENSP00000368648.2:p.Arg8Ter
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000349563
  ensembl transcript: ENST00000357055
  gene symbol: SLC30A6
  hgvsc: ENST00000357055.3:c.-553C>T
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000440678
  ensembl transcript: ENST00000538303
  gene symbol: SLC30A6
  hgvsc: ENST00000538303.1:c.4-2758C>T
  variant of: http://identifiers.org/hgnc/19305
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1580
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 958
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1180
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24848
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3239
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8501
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17584
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Arg8Ter
num of homozygotes: 0
population: Latino
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Other
reference allele: C
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: QD

2-32396375-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32396375
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 32396375
    reference: chr 2
allele count: 2
allele frequency: 1.648695881557688e-5
allele num: 121308
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000399005
  ensembl transcript: ENST00000435660
  gene symbol: SLC30A6
  hgvsc: ENST00000435660.1:c.23G>A
  hgvsp: ENSP00000399005.1:p.Arg8Gln
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000282587
  ensembl transcript: ENST00000282587
  gene symbol: SLC30A6
  hgvsc: ENST00000282587.5:c.23G>A
  hgvsp: ENSP00000282587.5:p.Arg8Gln
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000440678
  ensembl transcript: ENST00000538303
  gene symbol: SLC30A6
  hgvsc: ENST00000538303.1:c.4-2757G>A
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000349563
  ensembl transcript: ENST00000357055
  gene symbol: SLC30A6
  hgvsc: ENST00000357055.3:c.-552G>A
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000384041
  ensembl transcript: ENST00000406369
  gene symbol: SLC30A6
  hgvsc: ENST00000406369.1:c.-5+5403G>A
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000415790
  ensembl transcript: ENST00000454324
  gene symbol: SLC30A6
  hgvsc: ENST00000454324.1:c.23G>A
  hgvsp: ENSP00000415790.1:p.Arg8Gln
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000393946
  ensembl transcript: ENST00000440718
  gene symbol: SLC30A6
  hgvsc: ENST00000440718.1:c.4-2757G>A
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000396634
  ensembl transcript: ENST00000457724
  gene symbol: SLC30A6
  hgvsc: ENST00000457724.1:c.23G>A
  hgvsp: ENSP00000396634.1:p.Arg8Gln
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000388013
  ensembl transcript: ENST00000449777
  gene symbol: SLC30A6
  hgvsc: ENST00000449777.1:c.23G>A
  hgvsp: ENSP00000388013.1:p.Arg8Gln
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000368648
  ensembl transcript: ENST00000379343
  gene symbol: SLC30A6
  hgvsc: ENST00000379343.2:c.23G>A
  hgvsp: ENSP00000368648.2:p.Arg8Gln
  variant of: http://identifiers.org/hgnc/19305
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3241
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24842
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17599
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8508
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 516
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1177
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 595
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1577
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 958
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Arg8Gln
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD

2-32396375-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32396375
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 32396375
    reference: chr 2
allele count: 1
allele frequency: 8.24347940778844e-6
allele num: 121308
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000399005
  ensembl transcript: ENST00000435660
  gene symbol: SLC30A6
  hgvsc: ENST00000435660.1:c.23G>T
  hgvsp: ENSP00000399005.1:p.Arg8Leu
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000396634
  ensembl transcript: ENST00000457724
  gene symbol: SLC30A6
  hgvsc: ENST00000457724.1:c.23G>T
  hgvsp: ENSP00000396634.1:p.Arg8Leu
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000393946
  ensembl transcript: ENST00000440718
  gene symbol: SLC30A6
  hgvsc: ENST00000440718.1:c.4-2757G>T
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000440678
  ensembl transcript: ENST00000538303
  gene symbol: SLC30A6
  hgvsc: ENST00000538303.1:c.4-2757G>T
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000349563
  ensembl transcript: ENST00000357055
  gene symbol: SLC30A6
  hgvsc: ENST00000357055.3:c.-552G>T
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000368648
  ensembl transcript: ENST00000379343
  gene symbol: SLC30A6
  hgvsc: ENST00000379343.2:c.23G>T
  hgvsp: ENSP00000368648.2:p.Arg8Leu
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000388013
  ensembl transcript: ENST00000449777
  gene symbol: SLC30A6
  hgvsc: ENST00000449777.1:c.23G>T
  hgvsp: ENSP00000388013.1:p.Arg8Leu
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000282587
  ensembl transcript: ENST00000282587
  gene symbol: SLC30A6
  hgvsc: ENST00000282587.5:c.23G>T
  hgvsp: ENSP00000282587.5:p.Arg8Leu
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000415790
  ensembl transcript: ENST00000454324
  gene symbol: SLC30A6
  hgvsc: ENST00000454324.1:c.23G>T
  hgvsp: ENSP00000415790.1:p.Arg8Leu
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000384041
  ensembl transcript: ENST00000406369
  gene symbol: SLC30A6
  hgvsc: ENST00000406369.1:c.-5+5403G>T
  variant of: http://identifiers.org/hgnc/19305
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8508
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 516
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24842
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3241
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 595
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17599
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 958
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1577
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1177
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Arg8Leu
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: European (Finnish)
population: African
population: Other
reference allele: G
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum

http://identifiers.org/exac.variant/2-32396380-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32396380
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 32396380
    reference: chr 2
allele count: 1
allele frequency: 8.24279991427488e-6
allele num: 121318
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000349563
  ensembl transcript: ENST00000357055
  gene symbol: SLC30A6
  hgvsc: ENST00000357055.3:c.-547C>A
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000396634
  ensembl transcript: ENST00000457724
  gene symbol: SLC30A6
  hgvsc: ENST00000457724.1:c.28C>A
  hgvsp: ENSP00000396634.1:p.Pro10Thr
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000440678
  ensembl transcript: ENST00000538303
  gene symbol: SLC30A6
  hgvsc: ENST00000538303.1:c.4-2752C>A
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000399005
  ensembl transcript: ENST00000435660
  gene symbol: SLC30A6
  hgvsc: ENST00000435660.1:c.28C>A
  hgvsp: ENSP00000399005.1:p.Pro10Thr
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000388013
  ensembl transcript: ENST00000449777
  gene symbol: SLC30A6
  hgvsc: ENST00000449777.1:c.28C>A
  hgvsp: ENSP00000388013.1:p.Pro10Thr
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000282587
  ensembl transcript: ENST00000282587
  gene symbol: SLC30A6
  hgvsc: ENST00000282587.5:c.28C>A
  hgvsp: ENSP00000282587.5:p.Pro10Thr
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000393946
  ensembl transcript: ENST00000440718
  gene symbol: SLC30A6
  hgvsc: ENST00000440718.1:c.4-2752C>A
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000368648
  ensembl transcript: ENST00000379343
  gene symbol: SLC30A6
  hgvsc: ENST00000379343.2:c.28C>A
  hgvsp: ENSP00000368648.2:p.Pro10Thr
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000415790
  ensembl transcript: ENST00000454324
  gene symbol: SLC30A6
  hgvsc: ENST00000454324.1:c.28C>A
  hgvsp: ENSP00000415790.1:p.Pro10Thr
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000384041
  ensembl transcript: ENST00000406369
  gene symbol: SLC30A6
  hgvsc: ENST00000406369.1:c.-5+5408C>A
  variant of: http://identifiers.org/hgnc/19305
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1577
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17620
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3237
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 595
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8502
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1177
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24850
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 957
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 516
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36379
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Pro10Thr
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum

2-32396382-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32396382
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 32396382
    reference: chr 2
allele count: 1
allele frequency: 8.242664029014178e-6
allele num: 121320
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000388013
  ensembl transcript: ENST00000449777
  gene symbol: SLC30A6
  hgvsc: ENST00000449777.1:c.30A>G
  hgvsp: ENST00000449777.1:c.30A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000282587
  ensembl transcript: ENST00000282587
  gene symbol: SLC30A6
  hgvsc: ENST00000282587.5:c.30A>G
  hgvsp: ENST00000282587.5:c.30A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000396634
  ensembl transcript: ENST00000457724
  gene symbol: SLC30A6
  hgvsc: ENST00000457724.1:c.30A>G
  hgvsp: ENST00000457724.1:c.30A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000349563
  ensembl transcript: ENST00000357055
  gene symbol: SLC30A6
  hgvsc: ENST00000357055.3:c.-545A>G
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000415790
  ensembl transcript: ENST00000454324
  gene symbol: SLC30A6
  hgvsc: ENST00000454324.1:c.30A>G
  hgvsp: ENST00000454324.1:c.30A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000393946
  ensembl transcript: ENST00000440718
  gene symbol: SLC30A6
  hgvsc: ENST00000440718.1:c.4-2750A>G
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000384041
  ensembl transcript: ENST00000406369
  gene symbol: SLC30A6
  hgvsc: ENST00000406369.1:c.-5+5410A>G
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000399005
  ensembl transcript: ENST00000435660
  gene symbol: SLC30A6
  hgvsc: ENST00000435660.1:c.30A>G
  hgvsp: ENST00000435660.1:c.30A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000440678
  ensembl transcript: ENST00000538303
  gene symbol: SLC30A6
  hgvsc: ENST00000538303.1:c.4-2750A>G
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000368648
  ensembl transcript: ENST00000379343
  gene symbol: SLC30A6
  hgvsc: ENST00000379343.2:c.30A>G
  hgvsp: ENST00000379343.2:c.30A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19305
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3236
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 595
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17622
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 957
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1177
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1577
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8501
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 516
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24851
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2070
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Pro10Pro
num of homozygotes: 0
population: Latino
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Other
population: East Asian
reference allele: A
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: FS

2-32396383-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32396383
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 32396383
    reference: chr 2
allele count: 1
allele frequency: 8.242392271933006e-6
allele num: 121324
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000396634
  ensembl transcript: ENST00000457724
  gene symbol: SLC30A6
  hgvsc: ENST00000457724.1:c.31C>G
  hgvsp: ENSP00000396634.1:p.Gln11Glu
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000349563
  ensembl transcript: ENST00000357055
  gene symbol: SLC30A6
  hgvsc: ENST00000357055.3:c.-544C>G
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000399005
  ensembl transcript: ENST00000435660
  gene symbol: SLC30A6
  hgvsc: ENST00000435660.1:c.31C>G
  hgvsp: ENSP00000399005.1:p.Gln11Glu
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000368648
  ensembl transcript: ENST00000379343
  gene symbol: SLC30A6
  hgvsc: ENST00000379343.2:c.31C>G
  hgvsp: ENSP00000368648.2:p.Gln11Glu
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000393946
  ensembl transcript: ENST00000440718
  gene symbol: SLC30A6
  hgvsc: ENST00000440718.1:c.4-2749C>G
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000415790
  ensembl transcript: ENST00000454324
  gene symbol: SLC30A6
  hgvsc: ENST00000454324.1:c.31C>G
  hgvsp: ENSP00000415790.1:p.Gln11Glu
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000384041
  ensembl transcript: ENST00000406369
  gene symbol: SLC30A6
  hgvsc: ENST00000406369.1:c.-5+5411C>G
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000388013
  ensembl transcript: ENST00000449777
  gene symbol: SLC30A6
  hgvsc: ENST00000449777.1:c.31C>G
  hgvsp: ENSP00000388013.1:p.Gln11Glu
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000282587
  ensembl transcript: ENST00000282587
  gene symbol: SLC30A6
  hgvsc: ENST00000282587.5:c.31C>G
  hgvsp: ENSP00000282587.5:p.Gln11Glu
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000440678
  ensembl transcript: ENST00000538303
  gene symbol: SLC30A6
  hgvsc: ENST00000538303.1:c.4-2749C>G
  variant of: http://identifiers.org/hgnc/19305
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 24852
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1178
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8502
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 595
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17621
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 957
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 516
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1577
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3238
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Gln11Glu
num of homozygotes: 0
population: Other
population: African
population: Latino
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: European (Finnish)
reference allele: C
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum

2-32396385-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32396385
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 32396385
    reference: chr 2
allele count: 1
allele frequency: 8.242120532770671e-6
allele num: 121328
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000399005
  ensembl transcript: ENST00000435660
  gene symbol: SLC30A6
  hgvsc: ENST00000435660.1:c.33A>G
  hgvsp: ENST00000435660.1:c.33A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000282587
  ensembl transcript: ENST00000282587
  gene symbol: SLC30A6
  hgvsc: ENST00000282587.5:c.33A>G
  hgvsp: ENST00000282587.5:c.33A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000368648
  ensembl transcript: ENST00000379343
  gene symbol: SLC30A6
  hgvsc: ENST00000379343.2:c.33A>G
  hgvsp: ENST00000379343.2:c.33A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000440678
  ensembl transcript: ENST00000538303
  gene symbol: SLC30A6
  hgvsc: ENST00000538303.1:c.4-2747A>G
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000396634
  ensembl transcript: ENST00000457724
  gene symbol: SLC30A6
  hgvsc: ENST00000457724.1:c.33A>G
  hgvsp: ENST00000457724.1:c.33A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000388013
  ensembl transcript: ENST00000449777
  gene symbol: SLC30A6
  hgvsc: ENST00000449777.1:c.33A>G
  hgvsp: ENST00000449777.1:c.33A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000415790
  ensembl transcript: ENST00000454324
  gene symbol: SLC30A6
  hgvsc: ENST00000454324.1:c.33A>G
  hgvsp: ENST00000454324.1:c.33A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000349563
  ensembl transcript: ENST00000357055
  gene symbol: SLC30A6
  hgvsc: ENST00000357055.3:c.-542A>G
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000393946
  ensembl transcript: ENST00000440718
  gene symbol: SLC30A6
  hgvsc: ENST00000440718.1:c.4-2747A>G
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000384041
  ensembl transcript: ENST00000406369
  gene symbol: SLC30A6
  hgvsc: ENST00000406369.1:c.-5+5413A>G
  variant of: http://identifiers.org/hgnc/19305
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1177
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 957
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17627
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3236
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8501
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1577
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 595
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24849
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 516
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36397
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Gln11Gln
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: African
population: Other
population: European (Non-Finnish)
population: East Asian
population: Latino
reference allele: A
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: ClippingRankSum

2-32396391-CT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32396391
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 32396390
    reference: chr 2
allele count: 1
allele frequency: 8.242120532770671e-6
allele num: 121328
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000349563
  ensembl transcript: ENST00000357055
  gene symbol: SLC30A6
  hgvsc: ENST00000357055.3:c.-530delT
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000368648
  ensembl transcript: ENST00000379343
  gene symbol: SLC30A6
  hgvsc: ENST00000379343.2:c.45delT
  hgvsp: ENSP00000368648.2:p.Phe15LeufsTer11
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000388013
  ensembl transcript: ENST00000449777
  gene symbol: SLC30A6
  hgvsc: ENST00000449777.1:c.45delT
  hgvsp: ENSP00000388013.1:p.Phe15LeufsTer11
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000396634
  ensembl transcript: ENST00000457724
  gene symbol: SLC30A6
  hgvsc: ENST00000457724.1:c.45delT
  hgvsp: ENSP00000396634.1:p.Phe15LeufsTer11
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000440678
  ensembl transcript: ENST00000538303
  gene symbol: SLC30A6
  hgvsc: ENST00000538303.1:c.4-2735delT
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000415790
  ensembl transcript: ENST00000454324
  gene symbol: SLC30A6
  hgvsc: ENST00000454324.1:c.45delT
  hgvsp: ENSP00000415790.1:p.Phe15LeufsTer11
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000399005
  ensembl transcript: ENST00000435660
  gene symbol: SLC30A6
  hgvsc: ENST00000435660.1:c.45delT
  hgvsp: ENSP00000399005.1:p.Phe15LeufsTer11
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000393946
  ensembl transcript: ENST00000440718
  gene symbol: SLC30A6
  hgvsc: ENST00000440718.1:c.4-2735delT
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000282587
  ensembl transcript: ENST00000282587
  gene symbol: SLC30A6
  hgvsc: ENST00000282587.5:c.45delT
  hgvsp: ENSP00000282587.5:p.Phe15LeufsTer11
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000384041
  ensembl transcript: ENST00000406369
  gene symbol: SLC30A6
  hgvsc: ENST00000406369.1:c.-5+5425delT
  variant of: http://identifiers.org/hgnc/19305
canonical: true
consequence: frameshift
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8506
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17635
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1177
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24824
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3243
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1580
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 516
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 959
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 597
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Phe15LeufsTer11
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
population: European (Finnish)
population: South Asian
population: Other
reference allele: CT
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum

2-32396396-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32396396
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 32396396
    reference: chr 2
allele count: 2
allele frequency: 1.648424106554134e-5
allele num: 121328
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000349563
  ensembl transcript: ENST00000357055
  gene symbol: SLC30A6
  hgvsc: ENST00000357055.3:c.-531T>C
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000396634
  ensembl transcript: ENST00000457724
  gene symbol: SLC30A6
  hgvsc: ENST00000457724.1:c.44T>C
  hgvsp: ENSP00000396634.1:p.Phe15Ser
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000399005
  ensembl transcript: ENST00000435660
  gene symbol: SLC30A6
  hgvsc: ENST00000435660.1:c.44T>C
  hgvsp: ENSP00000399005.1:p.Phe15Ser
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000388013
  ensembl transcript: ENST00000449777
  gene symbol: SLC30A6
  hgvsc: ENST00000449777.1:c.44T>C
  hgvsp: ENSP00000388013.1:p.Phe15Ser
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000440678
  ensembl transcript: ENST00000538303
  gene symbol: SLC30A6
  hgvsc: ENST00000538303.1:c.4-2736T>C
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000368648
  ensembl transcript: ENST00000379343
  gene symbol: SLC30A6
  hgvsc: ENST00000379343.2:c.44T>C
  hgvsp: ENSP00000368648.2:p.Phe15Ser
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000282587
  ensembl transcript: ENST00000282587
  gene symbol: SLC30A6
  hgvsc: ENST00000282587.5:c.44T>C
  hgvsp: ENSP00000282587.5:p.Phe15Ser
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000393946
  ensembl transcript: ENST00000440718
  gene symbol: SLC30A6
  hgvsc: ENST00000440718.1:c.4-2736T>C
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000415790
  ensembl transcript: ENST00000454324
  gene symbol: SLC30A6
  hgvsc: ENST00000454324.1:c.44T>C
  hgvsp: ENSP00000415790.1:p.Phe15Ser
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000384041
  ensembl transcript: ENST00000406369
  gene symbol: SLC30A6
  hgvsc: ENST00000406369.1:c.-5+5424T>C
  variant of: http://identifiers.org/hgnc/19305
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 956
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 595
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17664
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1178
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1577
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3237
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 516
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8500
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24816
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Phe15Ser
num of homozygotes: 0
population: African
population: Other
population: East Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: T
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD

2-32396398-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32396398
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 32396398
    reference: chr 2
allele count: 2
allele frequency: 1.648396933981703e-5
allele num: 121330
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000393946
  ensembl transcript: ENST00000440718
  gene symbol: SLC30A6
  hgvsc: ENST00000440718.1:c.4-2734G>A
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000415790
  ensembl transcript: ENST00000454324
  gene symbol: SLC30A6
  hgvsc: ENST00000454324.1:c.46G>A
  hgvsp: ENSP00000415790.1:p.Gly16Ser
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000384041
  ensembl transcript: ENST00000406369
  gene symbol: SLC30A6
  hgvsc: ENST00000406369.1:c.-5+5426G>A
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000396634
  ensembl transcript: ENST00000457724
  gene symbol: SLC30A6
  hgvsc: ENST00000457724.1:c.46G>A
  hgvsp: ENSP00000396634.1:p.Gly16Ser
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000282587
  ensembl transcript: ENST00000282587
  gene symbol: SLC30A6
  hgvsc: ENST00000282587.5:c.46G>A
  hgvsp: ENSP00000282587.5:p.Gly16Ser
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000399005
  ensembl transcript: ENST00000435660
  gene symbol: SLC30A6
  hgvsc: ENST00000435660.1:c.46G>A
  hgvsp: ENSP00000399005.1:p.Gly16Ser
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000388013
  ensembl transcript: ENST00000449777
  gene symbol: SLC30A6
  hgvsc: ENST00000449777.1:c.46G>A
  hgvsp: ENSP00000388013.1:p.Gly16Ser
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000368648
  ensembl transcript: ENST00000379343
  gene symbol: SLC30A6
  hgvsc: ENST00000379343.2:c.46G>A
  hgvsp: ENSP00000368648.2:p.Gly16Ser
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000349563
  ensembl transcript: ENST00000357055
  gene symbol: SLC30A6
  hgvsc: ENST00000357055.3:c.-529G>A
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000440678
  ensembl transcript: ENST00000538303
  gene symbol: SLC30A6
  hgvsc: ENST00000538303.1:c.4-2734G>A
  variant of: http://identifiers.org/hgnc/19305
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3240
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24806
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 596
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 955
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17671
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 516
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8501
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1578
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1178
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Gly16Ser
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: Other
population: African
population: South Asian
population: European (Finnish)
population: East Asian
reference allele: G
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQ

2-32396410-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32396410
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 32396410
    reference: chr 2
allele count: 4
allele frequency: 3.297065611605671e-5
allele num: 121320
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000384041
  ensembl transcript: ENST00000406369
  gene symbol: SLC30A6
  hgvsc: ENST00000406369.1:c.-5+5438C>T
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000393946
  ensembl transcript: ENST00000440718
  gene symbol: SLC30A6
  hgvsc: ENST00000440718.1:c.4-2722C>T
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000282587
  ensembl transcript: ENST00000282587
  gene symbol: SLC30A6
  hgvsc: ENST00000282587.5:c.58C>T
  hgvsp: ENSP00000282587.5:p.Arg20Trp
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000349563
  ensembl transcript: ENST00000357055
  gene symbol: SLC30A6
  hgvsc: ENST00000357055.3:c.-517C>T
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000399005
  ensembl transcript: ENST00000435660
  gene symbol: SLC30A6
  hgvsc: ENST00000435660.1:c.58C>T
  hgvsp: ENSP00000399005.1:p.Arg20Trp
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000396634
  ensembl transcript: ENST00000457724
  gene symbol: SLC30A6
  hgvsc: ENST00000457724.1:c.58C>T
  hgvsp: ENSP00000396634.1:p.Arg20Trp
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000415790
  ensembl transcript: ENST00000454324
  gene symbol: SLC30A6
  hgvsc: ENST00000454324.1:c.58C>T
  hgvsp: ENSP00000415790.1:p.Arg20Trp
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000368648
  ensembl transcript: ENST00000379343
  gene symbol: SLC30A6
  hgvsc: ENST00000379343.2:c.58C>T
  hgvsp: ENSP00000368648.2:p.Arg20Trp
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000388013
  ensembl transcript: ENST00000449777
  gene symbol: SLC30A6
  hgvsc: ENST00000449777.1:c.58C>T
  hgvsp: ENSP00000388013.1:p.Arg20Trp
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000440678
  ensembl transcript: ENST00000538303
  gene symbol: SLC30A6
  hgvsc: ENST00000538303.1:c.4-2722C>T
  variant of: http://identifiers.org/hgnc/19305
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8505
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17678
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24777
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 956
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 516
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 596
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3239
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1179
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1578
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Arg20Trp
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Latino
population: Other
reference allele: C
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: InbreedingCoeff

2-32396411-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32396411
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 32396411
    reference: chr 2
allele count: 10
allele frequency: 8.242392271933005e-5
allele num: 121324
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000393946
  ensembl transcript: ENST00000440718
  gene symbol: SLC30A6
  hgvsc: ENST00000440718.1:c.4-2721G>A
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000399005
  ensembl transcript: ENST00000435660
  gene symbol: SLC30A6
  hgvsc: ENST00000435660.1:c.59G>A
  hgvsp: ENSP00000399005.1:p.Arg20Gln
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000368648
  ensembl transcript: ENST00000379343
  gene symbol: SLC30A6
  hgvsc: ENST00000379343.2:c.59G>A
  hgvsp: ENSP00000368648.2:p.Arg20Gln
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000440678
  ensembl transcript: ENST00000538303
  gene symbol: SLC30A6
  hgvsc: ENST00000538303.1:c.4-2721G>A
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000396634
  ensembl transcript: ENST00000457724
  gene symbol: SLC30A6
  hgvsc: ENST00000457724.1:c.59G>A
  hgvsp: ENSP00000396634.1:p.Arg20Gln
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000388013
  ensembl transcript: ENST00000449777
  gene symbol: SLC30A6
  hgvsc: ENST00000449777.1:c.59G>A
  hgvsp: ENSP00000388013.1:p.Arg20Gln
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000415790
  ensembl transcript: ENST00000454324
  gene symbol: SLC30A6
  hgvsc: ENST00000454324.1:c.59G>A
  hgvsp: ENSP00000415790.1:p.Arg20Gln
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000282587
  ensembl transcript: ENST00000282587
  gene symbol: SLC30A6
  hgvsc: ENST00000282587.5:c.59G>A
  hgvsp: ENSP00000282587.5:p.Arg20Gln
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000349563
  ensembl transcript: ENST00000357055
  gene symbol: SLC30A6
  hgvsc: ENST00000357055.3:c.-516G>A
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000384041
  ensembl transcript: ENST00000406369
  gene symbol: SLC30A6
  hgvsc: ENST00000406369.1:c.-5+5439G>A
  variant of: http://identifiers.org/hgnc/19305
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1578
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17682
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1181
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 955
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8503
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 516
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 595
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24774
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3235
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Arg20Gln
num of homozygotes: 0
population: South Asian
population: Other
population: East Asian
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP

2-32396420-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32396420
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 32396420
    reference: chr 2
allele count: 1
allele frequency: 8.243751236562685e-6
allele num: 121304
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000368648
  ensembl transcript: ENST00000379343
  gene symbol: SLC30A6
  hgvsc: ENST00000379343.2:c.68G>C
  hgvsp: ENSP00000368648.2:p.Arg23Thr
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000393946
  ensembl transcript: ENST00000440718
  gene symbol: SLC30A6
  hgvsc: ENST00000440718.1:c.4-2712G>C
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000282587
  ensembl transcript: ENST00000282587
  gene symbol: SLC30A6
  hgvsc: ENST00000282587.5:c.68G>C
  hgvsp: ENSP00000282587.5:p.Arg23Thr
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000384041
  ensembl transcript: ENST00000406369
  gene symbol: SLC30A6
  hgvsc: ENST00000406369.1:c.-5+5448G>C
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000399005
  ensembl transcript: ENST00000435660
  gene symbol: SLC30A6
  hgvsc: ENST00000435660.1:c.68G>C
  hgvsp: ENSP00000399005.1:p.Arg23Thr
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000349563
  ensembl transcript: ENST00000357055
  gene symbol: SLC30A6
  hgvsc: ENST00000357055.3:c.-507G>C
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000440678
  ensembl transcript: ENST00000538303
  gene symbol: SLC30A6
  hgvsc: ENST00000538303.1:c.4-2712G>C
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000415790
  ensembl transcript: ENST00000454324
  gene symbol: SLC30A6
  hgvsc: ENST00000454324.1:c.68G>C
  hgvsp: ENSP00000415790.1:p.Arg23Thr
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000396634
  ensembl transcript: ENST00000457724
  gene symbol: SLC30A6
  hgvsc: ENST00000457724.1:c.68G>C
  hgvsp: ENSP00000396634.1:p.Arg23Thr
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000388013
  ensembl transcript: ENST00000449777
  gene symbol: SLC30A6
  hgvsc: ENST00000449777.1:c.68G>C
  hgvsp: ENSP00000388013.1:p.Arg23Thr
  variant of: http://identifiers.org/hgnc/19305
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17686
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 516
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8495
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 955
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24747
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1577
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3236
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1176
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 596
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36387
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Arg23Thr
num of homozygotes: 0
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: European (Finnish)
population: Other
reference allele: G
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum

2-32396420-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32396420
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 32396420
    reference: chr 2
allele count: 3
allele frequency: 2.473125370968806e-5
allele num: 121304
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000282587
  ensembl transcript: ENST00000282587
  gene symbol: SLC30A6
  hgvsc: ENST00000282587.5:c.68G>T
  hgvsp: ENSP00000282587.5:p.Arg23Ile
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000399005
  ensembl transcript: ENST00000435660
  gene symbol: SLC30A6
  hgvsc: ENST00000435660.1:c.68G>T
  hgvsp: ENSP00000399005.1:p.Arg23Ile
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000396634
  ensembl transcript: ENST00000457724
  gene symbol: SLC30A6
  hgvsc: ENST00000457724.1:c.68G>T
  hgvsp: ENSP00000396634.1:p.Arg23Ile
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000384041
  ensembl transcript: ENST00000406369
  gene symbol: SLC30A6
  hgvsc: ENST00000406369.1:c.-5+5448G>T
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000393946
  ensembl transcript: ENST00000440718
  gene symbol: SLC30A6
  hgvsc: ENST00000440718.1:c.4-2712G>T
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000440678
  ensembl transcript: ENST00000538303
  gene symbol: SLC30A6
  hgvsc: ENST00000538303.1:c.4-2712G>T
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000388013
  ensembl transcript: ENST00000449777
  gene symbol: SLC30A6
  hgvsc: ENST00000449777.1:c.68G>T
  hgvsp: ENSP00000388013.1:p.Arg23Ile
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000349563
  ensembl transcript: ENST00000357055
  gene symbol: SLC30A6
  hgvsc: ENST00000357055.3:c.-507G>T
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000368648
  ensembl transcript: ENST00000379343
  gene symbol: SLC30A6
  hgvsc: ENST00000379343.2:c.68G>T
  hgvsp: ENSP00000368648.2:p.Arg23Ile
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000415790
  ensembl transcript: ENST00000454324
  gene symbol: SLC30A6
  hgvsc: ENST00000454324.1:c.68G>T
  hgvsp: ENSP00000415790.1:p.Arg23Ile
  variant of: http://identifiers.org/hgnc/19305
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8495
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24747
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 955
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17686
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 516
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3236
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1176
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1577
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 596
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Arg23Ile
num of homozygotes: 0
population: Other
population: African
population: East Asian
population: Latino
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum

2-32396421-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32396421
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 32396421
    reference: chr 2
allele count: 1
allele frequency: 8.244430886935875e-6
allele num: 121294
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000368648
  ensembl transcript: ENST00000379343
  gene symbol: SLC30A6
  hgvsc: ENST00000379343.2:c.69A>G
  hgvsp: ENST00000379343.2:c.69A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000415790
  ensembl transcript: ENST00000454324
  gene symbol: SLC30A6
  hgvsc: ENST00000454324.1:c.69A>G
  hgvsp: ENST00000454324.1:c.69A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000384041
  ensembl transcript: ENST00000406369
  gene symbol: SLC30A6
  hgvsc: ENST00000406369.1:c.-5+5449A>G
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000388013
  ensembl transcript: ENST00000449777
  gene symbol: SLC30A6
  hgvsc: ENST00000449777.1:c.69A>G
  hgvsp: ENST00000449777.1:c.69A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000440678
  ensembl transcript: ENST00000538303
  gene symbol: SLC30A6
  hgvsc: ENST00000538303.1:c.4-2711A>G
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000396634
  ensembl transcript: ENST00000457724
  gene symbol: SLC30A6
  hgvsc: ENST00000457724.1:c.69A>G
  hgvsp: ENST00000457724.1:c.69A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000399005
  ensembl transcript: ENST00000435660
  gene symbol: SLC30A6
  hgvsc: ENST00000435660.1:c.69A>G
  hgvsp: ENST00000435660.1:c.69A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000282587
  ensembl transcript: ENST00000282587
  gene symbol: SLC30A6
  hgvsc: ENST00000282587.5:c.69A>G
  hgvsp: ENST00000282587.5:c.69A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000349563
  ensembl transcript: ENST00000357055
  gene symbol: SLC30A6
  hgvsc: ENST00000357055.3:c.-506A>G
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000393946
  ensembl transcript: ENST00000440718
  gene symbol: SLC30A6
  hgvsc: ENST00000440718.1:c.4-2711A>G
  variant of: http://identifiers.org/hgnc/19305
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 597
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1176
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 516
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3236
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1576
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8495
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24739
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17690
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 955
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8238
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Arg23Arg
num of homozygotes: 0
population: African
population: Latino
population: South Asian
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP

2-32396426-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32396426
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 32396426
    reference: chr 2
allele count: 1
allele frequency: 8.245654540057389e-6
allele num: 121276
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000349563
  ensembl transcript: ENST00000357055
  gene symbol: SLC30A6
  hgvsc: ENST00000357055.3:c.-501T>C
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000440678
  ensembl transcript: ENST00000538303
  gene symbol: SLC30A6
  hgvsc: ENST00000538303.1:c.4-2706T>C
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000399005
  ensembl transcript: ENST00000435660
  gene symbol: SLC30A6
  hgvsc: ENST00000435660.1:c.74T>C
  hgvsp: ENSP00000399005.1:p.Val25Ala
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000388013
  ensembl transcript: ENST00000449777
  gene symbol: SLC30A6
  hgvsc: ENST00000449777.1:c.74T>C
  hgvsp: ENSP00000388013.1:p.Val25Ala
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000393946
  ensembl transcript: ENST00000440718
  gene symbol: SLC30A6
  hgvsc: ENST00000440718.1:c.4-2706T>C
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000282587
  ensembl transcript: ENST00000282587
  gene symbol: SLC30A6
  hgvsc: ENST00000282587.5:c.74T>C
  hgvsp: ENSP00000282587.5:p.Val25Ala
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000396634
  ensembl transcript: ENST00000457724
  gene symbol: SLC30A6
  hgvsc: ENST00000457724.1:c.74T>C
  hgvsp: ENSP00000396634.1:p.Val25Ala
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000368648
  ensembl transcript: ENST00000379343
  gene symbol: SLC30A6
  hgvsc: ENST00000379343.2:c.74T>C
  hgvsp: ENSP00000368648.2:p.Val25Ala
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000384041
  ensembl transcript: ENST00000406369
  gene symbol: SLC30A6
  hgvsc: ENST00000406369.1:c.-5+5454T>C
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000415790
  ensembl transcript: ENST00000454324
  gene symbol: SLC30A6
  hgvsc: ENST00000454324.1:c.74T>C
  hgvsp: ENSP00000415790.1:p.Val25Ala
  variant of: http://identifiers.org/hgnc/19305
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1577
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3235
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 516
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24712
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17685
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 955
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 596
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8494
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1177
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Val25Ala
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: Latino
population: African
population: East Asian
reference allele: T
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: ReadPosRankSum

2-32396428-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32396428
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 32396428
    reference: chr 2
allele count: 1
allele frequency: 8.247558722618106e-6
allele num: 121248
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000396634
  ensembl transcript: ENST00000457724
  gene symbol: SLC30A6
  hgvsc: ENST00000457724.1:c.76G>A
  hgvsp: ENSP00000396634.1:p.Ala26Thr
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000349563
  ensembl transcript: ENST00000357055
  gene symbol: SLC30A6
  hgvsc: ENST00000357055.3:c.-499G>A
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000393946
  ensembl transcript: ENST00000440718
  gene symbol: SLC30A6
  hgvsc: ENST00000440718.1:c.4-2704G>A
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000415790
  ensembl transcript: ENST00000454324
  gene symbol: SLC30A6
  hgvsc: ENST00000454324.1:c.76G>A
  hgvsp: ENSP00000415790.1:p.Ala26Thr
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000282587
  ensembl transcript: ENST00000282587
  gene symbol: SLC30A6
  hgvsc: ENST00000282587.5:c.76G>A
  hgvsp: ENSP00000282587.5:p.Ala26Thr
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000384041
  ensembl transcript: ENST00000406369
  gene symbol: SLC30A6
  hgvsc: ENST00000406369.1:c.-5+5456G>A
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000399005
  ensembl transcript: ENST00000435660
  gene symbol: SLC30A6
  hgvsc: ENST00000435660.1:c.76G>A
  hgvsp: ENSP00000399005.1:p.Ala26Thr
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000440678
  ensembl transcript: ENST00000538303
  gene symbol: SLC30A6
  hgvsc: ENST00000538303.1:c.4-2704G>A
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000368648
  ensembl transcript: ENST00000379343
  gene symbol: SLC30A6
  hgvsc: ENST00000379343.2:c.76G>A
  hgvsp: ENSP00000368648.2:p.Ala26Thr
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000388013
  ensembl transcript: ENST00000449777
  gene symbol: SLC30A6
  hgvsc: ENST00000449777.1:c.76G>A
  hgvsp: ENSP00000388013.1:p.Ala26Thr
  variant of: http://identifiers.org/hgnc/19305
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8495
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1577
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24679
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17680
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 596
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3236
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1176
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 516
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 958
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Ala26Thr
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: South Asian
population: African
population: East Asian
reference allele: G
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum

2-32396437-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32396437
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 32396437
    reference: chr 2
allele count: 1
allele frequency: 8.252595441266279e-6
allele num: 121174
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: stop_gained
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000415790
  ensembl transcript: ENST00000454324
  gene symbol: SLC30A6
  hgvsc: ENST00000454324.1:c.85C>T
  hgvsp: ENSP00000415790.1:p.Arg29Ter
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: stop_gained
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000388013
  ensembl transcript: ENST00000449777
  gene symbol: SLC30A6
  hgvsc: ENST00000449777.1:c.85C>T
  hgvsp: ENSP00000388013.1:p.Arg29Ter
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000399005
  ensembl transcript: ENST00000435660
  gene symbol: SLC30A6
  hgvsc: ENST00000435660.1:c.85C>T
  hgvsp: ENSP00000399005.1:p.Arg29Ter
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000349563
  ensembl transcript: ENST00000357055
  gene symbol: SLC30A6
  hgvsc: ENST00000357055.3:c.-490C>T
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000440678
  ensembl transcript: ENST00000538303
  gene symbol: SLC30A6
  hgvsc: ENST00000538303.1:c.4-2695C>T
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000368648
  ensembl transcript: ENST00000379343
  gene symbol: SLC30A6
  hgvsc: ENST00000379343.2:c.85C>T
  hgvsp: ENSP00000368648.2:p.Arg29Ter
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000393946
  ensembl transcript: ENST00000440718
  gene symbol: SLC30A6
  hgvsc: ENST00000440718.1:c.4-2695C>T
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000384041
  ensembl transcript: ENST00000406369
  gene symbol: SLC30A6
  hgvsc: ENST00000406369.1:c.-5+5465C>T
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: stop_gained
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000396634
  ensembl transcript: ENST00000457724
  gene symbol: SLC30A6
  hgvsc: ENST00000457724.1:c.85C>T
  hgvsp: ENSP00000396634.1:p.Arg29Ter
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000282587
  ensembl transcript: ENST00000282587
  gene symbol: SLC30A6
  hgvsc: ENST00000282587.5:c.85C>T
  hgvsp: ENSP00000282587.5:p.Arg29Ter
  variant of: http://identifiers.org/hgnc/19305
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24529
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1584
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17668
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8496
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3236
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 955
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1177
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 595
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Arg29Ter
num of homozygotes: 0
population: East Asian
population: Other
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: BaseQRankSum

2-32396438-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32396438
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 32396438
    reference: chr 2
allele count: 15
allele frequency: 1.237950614023505e-4
allele num: 121168
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000384041
  ensembl transcript: ENST00000406369
  gene symbol: SLC30A6
  hgvsc: ENST00000406369.1:c.-5+5466G>A
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000399005
  ensembl transcript: ENST00000435660
  gene symbol: SLC30A6
  hgvsc: ENST00000435660.1:c.86G>A
  hgvsp: ENSP00000399005.1:p.Arg29Gln
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000388013
  ensembl transcript: ENST00000449777
  gene symbol: SLC30A6
  hgvsc: ENST00000449777.1:c.86G>A
  hgvsp: ENSP00000388013.1:p.Arg29Gln
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000440678
  ensembl transcript: ENST00000538303
  gene symbol: SLC30A6
  hgvsc: ENST00000538303.1:c.4-2694G>A
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000282587
  ensembl transcript: ENST00000282587
  gene symbol: SLC30A6
  hgvsc: ENST00000282587.5:c.86G>A
  hgvsp: ENSP00000282587.5:p.Arg29Gln
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000393946
  ensembl transcript: ENST00000440718
  gene symbol: SLC30A6
  hgvsc: ENST00000440718.1:c.4-2694G>A
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000368648
  ensembl transcript: ENST00000379343
  gene symbol: SLC30A6
  hgvsc: ENST00000379343.2:c.86G>A
  hgvsp: ENSP00000368648.2:p.Arg29Gln
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000396634
  ensembl transcript: ENST00000457724
  gene symbol: SLC30A6
  hgvsc: ENST00000457724.1:c.86G>A
  hgvsp: ENSP00000396634.1:p.Arg29Gln
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000349563
  ensembl transcript: ENST00000357055
  gene symbol: SLC30A6
  hgvsc: ENST00000357055.3:c.-489G>A
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000415790
  ensembl transcript: ENST00000454324
  gene symbol: SLC30A6
  hgvsc: ENST00000454324.1:c.86G>A
  hgvsp: ENSP00000415790.1:p.Arg29Gln
  variant of: http://identifiers.org/hgnc/19305
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 24489
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1178
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1579
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 7.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17681
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3236
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 596
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8500
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 954
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 518
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Arg29Gln
num of homozygotes: 0
population: Other
population: Latino
population: East Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD

2-32396442-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32396442
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 32396442
    reference: chr 2
allele count: 1
allele frequency: 8.257501940512956e-6
allele num: 121102
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000388013
  ensembl transcript: ENST00000449777
  gene symbol: SLC30A6
  hgvsc: ENST00000449777.1:c.90G>A
  hgvsp: ENST00000449777.1:c.90G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000396634
  ensembl transcript: ENST00000457724
  gene symbol: SLC30A6
  hgvsc: ENST00000457724.1:c.90G>A
  hgvsp: ENST00000457724.1:c.90G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000399005
  ensembl transcript: ENST00000435660
  gene symbol: SLC30A6
  hgvsc: ENST00000435660.1:c.90G>A
  hgvsp: ENST00000435660.1:c.90G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000393946
  ensembl transcript: ENST00000440718
  gene symbol: SLC30A6
  hgvsc: ENST00000440718.1:c.4-2690G>A
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000349563
  ensembl transcript: ENST00000357055
  gene symbol: SLC30A6
  hgvsc: ENST00000357055.3:c.-485G>A
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000440678
  ensembl transcript: ENST00000538303
  gene symbol: SLC30A6
  hgvsc: ENST00000538303.1:c.4-2690G>A
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000282587
  ensembl transcript: ENST00000282587
  gene symbol: SLC30A6
  hgvsc: ENST00000282587.5:c.90G>A
  hgvsp: ENST00000282587.5:c.90G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000415790
  ensembl transcript: ENST00000454324
  gene symbol: SLC30A6
  hgvsc: ENST00000454324.1:c.90G>A
  hgvsp: ENST00000454324.1:c.90G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000368648
  ensembl transcript: ENST00000379343
  gene symbol: SLC30A6
  hgvsc: ENST00000379343.2:c.90G>A
  hgvsp: ENST00000379343.2:c.90G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000384041
  ensembl transcript: ENST00000406369
  gene symbol: SLC30A6
  hgvsc: ENST00000406369.1:c.-5+5470G>A
  variant of: http://identifiers.org/hgnc/19305
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8494
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3236
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17660
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1575
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24363
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1176
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 954
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 596
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.90G>A
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: East Asian
population: Latino
population: Other
population: European (Finnish)
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum

2-32396447-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32396447
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 32396447
    reference: chr 2
allele count: 1
allele frequency: 8.263506701703935e-6
allele num: 121014
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000282587
  ensembl transcript: ENST00000282587
  gene symbol: SLC30A6
  hgvsc: ENST00000282587.5:c.90+5G>C
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000388013
  ensembl transcript: ENST00000449777
  gene symbol: SLC30A6
  hgvsc: ENST00000449777.1:c.90+5G>C
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000393946
  ensembl transcript: ENST00000440718
  gene symbol: SLC30A6
  hgvsc: ENST00000440718.1:c.4-2685G>C
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000399005
  ensembl transcript: ENST00000435660
  gene symbol: SLC30A6
  hgvsc: ENST00000435660.1:c.90+5G>C
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000440678
  ensembl transcript: ENST00000538303
  gene symbol: SLC30A6
  hgvsc: ENST00000538303.1:c.4-2685G>C
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000349563
  ensembl transcript: ENST00000357055
  gene symbol: SLC30A6
  hgvsc: ENST00000357055.3:c.-485+5G>C
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000368648
  ensembl transcript: ENST00000379343
  gene symbol: SLC30A6
  hgvsc: ENST00000379343.2:c.90+5G>C
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000415790
  ensembl transcript: ENST00000454324
  gene symbol: SLC30A6
  hgvsc: ENST00000454324.1:c.90+5G>C
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000384041
  ensembl transcript: ENST00000406369
  gene symbol: SLC30A6
  hgvsc: ENST00000406369.1:c.-5+5475G>C
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000396634
  ensembl transcript: ENST00000457724
  gene symbol: SLC30A6
  hgvsc: ENST00000457724.1:c.90+5G>C
  variant of: http://identifiers.org/hgnc/19305
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1176
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3235
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 516
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 521
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 595
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 954
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17585
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24108
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1575
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8482
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
hgvs: c.90+5G>C
num of homozygotes: 0
population: African
population: Other
population: South Asian
population: Latino
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum

2-32396454-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32396454
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 32396454
    reference: chr 2
allele count: 2
allele frequency: 1.655272871732905e-5
allele num: 120826
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000396634
  ensembl transcript: ENST00000457724
  gene symbol: SLC30A6
  hgvsc: ENST00000457724.1:c.90+12C>T
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000415790
  ensembl transcript: ENST00000454324
  gene symbol: SLC30A6
  hgvsc: ENST00000454324.1:c.90+12C>T
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000399005
  ensembl transcript: ENST00000435660
  gene symbol: SLC30A6
  hgvsc: ENST00000435660.1:c.90+12C>T
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000388013
  ensembl transcript: ENST00000449777
  gene symbol: SLC30A6
  hgvsc: ENST00000449777.1:c.90+12C>T
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000393946
  ensembl transcript: ENST00000440718
  gene symbol: SLC30A6
  hgvsc: ENST00000440718.1:c.4-2678C>T
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000349563
  ensembl transcript: ENST00000357055
  gene symbol: SLC30A6
  hgvsc: ENST00000357055.3:c.-485+12C>T
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000384041
  ensembl transcript: ENST00000406369
  gene symbol: SLC30A6
  hgvsc: ENST00000406369.1:c.-5+5482C>T
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000368648
  ensembl transcript: ENST00000379343
  gene symbol: SLC30A6
  hgvsc: ENST00000379343.2:c.90+12C>T
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000440678
  ensembl transcript: ENST00000538303
  gene symbol: SLC30A6
  hgvsc: ENST00000538303.1:c.4-2678C>T
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000282587
  ensembl transcript: ENST00000282587
  gene symbol: SLC30A6
  hgvsc: ENST00000282587.5:c.90+12C>T
  variant of: http://identifiers.org/hgnc/19305
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 595
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 956
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1577
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1077
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23410
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17448
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8475
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3237
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1176
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 516
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2048
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: African
population: Other
population: European (Finnish)
population: Latino
population: East Asian
reference allele: C
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: QD

2-32396460-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32396460
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 32396460
    reference: chr 2
allele count: 16
allele frequency: 1.326128037662036e-4
allele num: 120652
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000396634
  ensembl transcript: ENST00000457724
  gene symbol: SLC30A6
  hgvsc: ENST00000457724.1:c.90+18C>T
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000282587
  ensembl transcript: ENST00000282587
  gene symbol: SLC30A6
  hgvsc: ENST00000282587.5:c.90+18C>T
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000393946
  ensembl transcript: ENST00000440718
  gene symbol: SLC30A6
  hgvsc: ENST00000440718.1:c.4-2672C>T
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000384041
  ensembl transcript: ENST00000406369
  gene symbol: SLC30A6
  hgvsc: ENST00000406369.1:c.-5+5488C>T
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000440678
  ensembl transcript: ENST00000538303
  gene symbol: SLC30A6
  hgvsc: ENST00000538303.1:c.4-2672C>T
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000388013
  ensembl transcript: ENST00000449777
  gene symbol: SLC30A6
  hgvsc: ENST00000449777.1:c.90+18C>T
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000368648
  ensembl transcript: ENST00000379343
  gene symbol: SLC30A6
  hgvsc: ENST00000379343.2:c.90+18C>T
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000399005
  ensembl transcript: ENST00000435660
  gene symbol: SLC30A6
  hgvsc: ENST00000435660.1:c.90+18C>T
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000349563
  ensembl transcript: ENST00000357055
  gene symbol: SLC30A6
  hgvsc: ENST00000357055.3:c.-485+18C>T
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000415790
  ensembl transcript: ENST00000454324
  gene symbol: SLC30A6
  hgvsc: ENST00000454324.1:c.90+18C>T
  variant of: http://identifiers.org/hgnc/19305
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1579
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 22380
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1819
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8471
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 685
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 6.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 960
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1176
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 597
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17319
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3233
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 519
  bin: 5.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 3244
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6039
  bin: 9.75e1
  variant carriers: 16
genotype quality: GenotypeQuality
  all individuals: 802
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: African
population: Latino
population: Other
population: East Asian
reference allele: C
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum

2-32396461-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32396461
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 32396461
    reference: chr 2
allele count: 1
allele frequency: 8.290361625574107e-6
allele num: 120622
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000396634
  ensembl transcript: ENST00000457724
  gene symbol: SLC30A6
  hgvsc: ENST00000457724.1:c.90+19C>T
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000349563
  ensembl transcript: ENST00000357055
  gene symbol: SLC30A6
  hgvsc: ENST00000357055.3:c.-485+19C>T
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000282587
  ensembl transcript: ENST00000282587
  gene symbol: SLC30A6
  hgvsc: ENST00000282587.5:c.90+19C>T
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000393946
  ensembl transcript: ENST00000440718
  gene symbol: SLC30A6
  hgvsc: ENST00000440718.1:c.4-2671C>T
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000388013
  ensembl transcript: ENST00000449777
  gene symbol: SLC30A6
  hgvsc: ENST00000449777.1:c.90+19C>T
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000368648
  ensembl transcript: ENST00000379343
  gene symbol: SLC30A6
  hgvsc: ENST00000379343.2:c.90+19C>T
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000384041
  ensembl transcript: ENST00000406369
  gene symbol: SLC30A6
  hgvsc: ENST00000406369.1:c.-5+5489C>T
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000440678
  ensembl transcript: ENST00000538303
  gene symbol: SLC30A6
  hgvsc: ENST00000538303.1:c.4-2671C>T
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000399005
  ensembl transcript: ENST00000435660
  gene symbol: SLC30A6
  hgvsc: ENST00000435660.1:c.90+19C>T
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000415790
  ensembl transcript: ENST00000454324
  gene symbol: SLC30A6
  hgvsc: ENST00000454324.1:c.90+19C>T
  variant of: http://identifiers.org/hgnc/19305
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 769
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8488
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22173
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 595
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17284
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1585
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 961
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1176
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3232
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1954
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 396
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 651
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3243
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: East Asian
population: European (Finnish)
population: African
reference allele: C
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: QD

2-32396471-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32396471
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 32396471
    reference: chr 2
allele count: 1
allele frequency: 8.303854649328218e-6
allele num: 120426
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000368648
  ensembl transcript: ENST00000379343
  gene symbol: SLC30A6
  hgvsc: ENST00000379343.2:c.90+29T>G
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000388013
  ensembl transcript: ENST00000449777
  gene symbol: SLC30A6
  hgvsc: ENST00000449777.1:c.90+29T>G
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000282587
  ensembl transcript: ENST00000282587
  gene symbol: SLC30A6
  hgvsc: ENST00000282587.5:c.90+29T>G
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000415790
  ensembl transcript: ENST00000454324
  gene symbol: SLC30A6
  hgvsc: ENST00000454324.1:c.90+29T>G
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000396634
  ensembl transcript: ENST00000457724
  gene symbol: SLC30A6
  hgvsc: ENST00000457724.1:c.90+29T>G
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000384041
  ensembl transcript: ENST00000406369
  gene symbol: SLC30A6
  hgvsc: ENST00000406369.1:c.-5+5499T>G
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000440678
  ensembl transcript: ENST00000538303
  gene symbol: SLC30A6
  hgvsc: ENST00000538303.1:c.4-2661T>G
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000349563
  ensembl transcript: ENST00000357055
  gene symbol: SLC30A6
  hgvsc: ENST00000357055.3:c.-485+29T>G
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000399005
  ensembl transcript: ENST00000435660
  gene symbol: SLC30A6
  hgvsc: ENST00000435660.1:c.90+29T>G
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000393946
  ensembl transcript: ENST00000440718
  gene symbol: SLC30A6
  hgvsc: ENST00000440718.1:c.4-2661T>G
  variant of: http://identifiers.org/hgnc/19305
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 955
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8343
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19044
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 516
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3861
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3218
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1176
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1579
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16484
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 595
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2866
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6023
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: East Asian
population: Latino
population: South Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: African
reference allele: T
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum

2-32396472-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32396472
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 32396472
    reference: chr 2
allele count: 1
allele frequency: 8.305233958440609e-6
allele num: 120406
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000396634
  ensembl transcript: ENST00000457724
  gene symbol: SLC30A6
  hgvsc: ENST00000457724.1:c.90+30T>C
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000440678
  ensembl transcript: ENST00000538303
  gene symbol: SLC30A6
  hgvsc: ENST00000538303.1:c.4-2660T>C
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000282587
  ensembl transcript: ENST00000282587
  gene symbol: SLC30A6
  hgvsc: ENST00000282587.5:c.90+30T>C
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000388013
  ensembl transcript: ENST00000449777
  gene symbol: SLC30A6
  hgvsc: ENST00000449777.1:c.90+30T>C
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000384041
  ensembl transcript: ENST00000406369
  gene symbol: SLC30A6
  hgvsc: ENST00000406369.1:c.-5+5500T>C
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000368648
  ensembl transcript: ENST00000379343
  gene symbol: SLC30A6
  hgvsc: ENST00000379343.2:c.90+30T>C
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000349563
  ensembl transcript: ENST00000357055
  gene symbol: SLC30A6
  hgvsc: ENST00000357055.3:c.-485+30T>C
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000399005
  ensembl transcript: ENST00000435660
  gene symbol: SLC30A6
  hgvsc: ENST00000435660.1:c.90+30T>C
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000415790
  ensembl transcript: ENST00000454324
  gene symbol: SLC30A6
  hgvsc: ENST00000454324.1:c.90+30T>C
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000393946
  ensembl transcript: ENST00000440718
  gene symbol: SLC30A6
  hgvsc: ENST00000440718.1:c.4-2660T>C
  variant of: http://identifiers.org/hgnc/19305
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8318
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18682
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1580
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16348
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 955
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1176
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 516
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4045
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 596
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3215
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3197
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 353
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1942
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2490
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: African
population: Other
reference allele: T
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: QD

2-32396486-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32396486
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 32396486
    reference: chr 2
allele count: 11
allele frequency: 9.219216199000972e-5
allele num: 119316
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000440678
  ensembl transcript: ENST00000538303
  gene symbol: SLC30A6
  hgvsc: ENST00000538303.1:c.4-2646C>T
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000368648
  ensembl transcript: ENST00000379343
  gene symbol: SLC30A6
  hgvsc: ENST00000379343.2:c.90+44C>T
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000384041
  ensembl transcript: ENST00000406369
  gene symbol: SLC30A6
  hgvsc: ENST00000406369.1:c.-5+5514C>T
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000393946
  ensembl transcript: ENST00000440718
  gene symbol: SLC30A6
  hgvsc: ENST00000440718.1:c.4-2646C>T
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000349563
  ensembl transcript: ENST00000357055
  gene symbol: SLC30A6
  hgvsc: ENST00000357055.3:c.-485+44C>T
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000388013
  ensembl transcript: ENST00000449777
  gene symbol: SLC30A6
  hgvsc: ENST00000449777.1:c.90+44C>T
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000282587
  ensembl transcript: ENST00000282587
  gene symbol: SLC30A6
  hgvsc: ENST00000282587.5:c.90+44C>T
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000396634
  ensembl transcript: ENST00000457724
  gene symbol: SLC30A6
  hgvsc: ENST00000457724.1:c.90+44C>T
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000399005
  ensembl transcript: ENST00000435660
  gene symbol: SLC30A6
  hgvsc: ENST00000435660.1:c.90+44C>T
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000415790
  ensembl transcript: ENST00000454324
  gene symbol: SLC30A6
  hgvsc: ENST00000454324.1:c.90+44C>T
  variant of: http://identifiers.org/hgnc/19305
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1176
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 776
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9993
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 594
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4735
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 953
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12543
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3136
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1560
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 15771
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7301
  bin: 3.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 297
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 783
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6025
  bin: 9.75e1
  variant carriers: 11
num of homozygotes: 0
population: Other
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP

2-32396487-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32396487
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 32396487
    reference: chr 2
allele count: 2
allele frequency: 1.674088458834165e-5
allele num: 119468
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000415790
  ensembl transcript: ENST00000454324
  gene symbol: SLC30A6
  hgvsc: ENST00000454324.1:c.90+45A>T
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000388013
  ensembl transcript: ENST00000449777
  gene symbol: SLC30A6
  hgvsc: ENST00000449777.1:c.90+45A>T
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000440678
  ensembl transcript: ENST00000538303
  gene symbol: SLC30A6
  hgvsc: ENST00000538303.1:c.4-2645A>T
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000384041
  ensembl transcript: ENST00000406369
  gene symbol: SLC30A6
  hgvsc: ENST00000406369.1:c.-5+5515A>T
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000396634
  ensembl transcript: ENST00000457724
  gene symbol: SLC30A6
  hgvsc: ENST00000457724.1:c.90+45A>T
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000282587
  ensembl transcript: ENST00000282587
  gene symbol: SLC30A6
  hgvsc: ENST00000282587.5:c.90+45A>T
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000368648
  ensembl transcript: ENST00000379343
  gene symbol: SLC30A6
  hgvsc: ENST00000379343.2:c.90+45A>T
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000393946
  ensembl transcript: ENST00000440718
  gene symbol: SLC30A6
  hgvsc: ENST00000440718.1:c.4-2645A>T
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000399005
  ensembl transcript: ENST00000435660
  gene symbol: SLC30A6
  hgvsc: ENST00000435660.1:c.90+45A>T
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000349563
  ensembl transcript: ENST00000357055
  gene symbol: SLC30A6
  hgvsc: ENST00000357055.3:c.-485+45A>T
  variant of: http://identifiers.org/hgnc/19305
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7233
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1176
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9974
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 594
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 953
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4756
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12615
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 779
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1553
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15780
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3125
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 130
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2895
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5172
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
population: East Asian
reference allele: A
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum

2-32399082-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32399082
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 32399082
    reference: chr 2
allele count: 1
allele frequency: 8.278831029058698e-6
allele num: 120790
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000399005
  ensembl transcript: ENST00000435660
  gene symbol: SLC30A6
  hgvsc: ENST00000435660.1:c.91-50C>T
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000393946
  ensembl transcript: ENST00000440718
  gene symbol: SLC30A6
  hgvsc: ENST00000440718.1:c.4-50C>T
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000384041
  ensembl transcript: ENST00000406369
  gene symbol: SLC30A6
  hgvsc: ENST00000406369.1:c.-5+8110C>T
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000349563
  ensembl transcript: ENST00000357055
  gene symbol: SLC30A6
  hgvsc: ENST00000357055.3:c.-484-50C>T
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000396634
  ensembl transcript: ENST00000457724
  gene symbol: SLC30A6
  hgvsc: ENST00000457724.1:c.91-50C>T
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000388013
  ensembl transcript: ENST00000449777
  gene symbol: SLC30A6
  hgvsc: ENST00000449777.1:c.90+2640C>T
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000415790
  ensembl transcript: ENST00000454324
  gene symbol: SLC30A6
  hgvsc: ENST00000454324.1:c.91-50C>T
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000368648
  ensembl transcript: ENST00000379343
  gene symbol: SLC30A6
  hgvsc: ENST00000379343.2:c.91-50C>T
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000440678
  ensembl transcript: ENST00000538303
  gene symbol: SLC30A6
  hgvsc: ENST00000538303.1:c.4-50C>T
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000282587
  ensembl transcript: ENST00000282587
  gene symbol: SLC30A6
  hgvsc: ENST00000282587.5:c.91-50C>T
  variant of: http://identifiers.org/hgnc/19305
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 821
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8783
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10578
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1937
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 793
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1772
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4096
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6132
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12542
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4176
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2779
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2632
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1114
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 281
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 355
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 874
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: Other
population: South Asian
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD

2-32399083-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32399083
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 32399083
    reference: chr 2
allele count: 5
allele frequency: 4.136812668575116e-5
allele num: 120866
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000384041
  ensembl transcript: ENST00000406369
  gene symbol: SLC30A6
  hgvsc: ENST00000406369.1:c.-5+8111G>A
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000393946
  ensembl transcript: ENST00000440718
  gene symbol: SLC30A6
  hgvsc: ENST00000440718.1:c.4-49G>A
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000415790
  ensembl transcript: ENST00000454324
  gene symbol: SLC30A6
  hgvsc: ENST00000454324.1:c.91-49G>A
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000440678
  ensembl transcript: ENST00000538303
  gene symbol: SLC30A6
  hgvsc: ENST00000538303.1:c.4-49G>A
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000399005
  ensembl transcript: ENST00000435660
  gene symbol: SLC30A6
  hgvsc: ENST00000435660.1:c.91-49G>A
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000349563
  ensembl transcript: ENST00000357055
  gene symbol: SLC30A6
  hgvsc: ENST00000357055.3:c.-484-49G>A
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000368648
  ensembl transcript: ENST00000379343
  gene symbol: SLC30A6
  hgvsc: ENST00000379343.2:c.91-49G>A
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000388013
  ensembl transcript: ENST00000449777
  gene symbol: SLC30A6
  hgvsc: ENST00000449777.1:c.90+2641G>A
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000282587
  ensembl transcript: ENST00000282587
  gene symbol: SLC30A6
  hgvsc: ENST00000282587.5:c.91-49G>A
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000396634
  ensembl transcript: ENST00000457724
  gene symbol: SLC30A6
  hgvsc: ENST00000457724.1:c.91-49G>A
  variant of: http://identifiers.org/hgnc/19305
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4282
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1707
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12571
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1769
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2779
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1113
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4172
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2630
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 814
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6133
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8779
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10613
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 793
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 660
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 191
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2948
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: Other
population: East Asian
population: European (Non-Finnish)
population: Latino
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum

2-32399089-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32399089
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 32399089
    reference: chr 2
allele count: 1
allele frequency: 8.267469162340024e-6
allele num: 120956
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000349563
  ensembl transcript: ENST00000357055
  gene symbol: SLC30A6
  hgvsc: ENST00000357055.3:c.-484-43T>C
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000282587
  ensembl transcript: ENST00000282587
  gene symbol: SLC30A6
  hgvsc: ENST00000282587.5:c.91-43T>C
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000396634
  ensembl transcript: ENST00000457724
  gene symbol: SLC30A6
  hgvsc: ENST00000457724.1:c.91-43T>C
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000399005
  ensembl transcript: ENST00000435660
  gene symbol: SLC30A6
  hgvsc: ENST00000435660.1:c.91-43T>C
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000368648
  ensembl transcript: ENST00000379343
  gene symbol: SLC30A6
  hgvsc: ENST00000379343.2:c.91-43T>C
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000393946
  ensembl transcript: ENST00000440718
  gene symbol: SLC30A6
  hgvsc: ENST00000440718.1:c.4-43T>C
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000415790
  ensembl transcript: ENST00000454324
  gene symbol: SLC30A6
  hgvsc: ENST00000454324.1:c.91-43T>C
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000388013
  ensembl transcript: ENST00000449777
  gene symbol: SLC30A6
  hgvsc: ENST00000449777.1:c.90+2647T>C
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000440678
  ensembl transcript: ENST00000538303
  gene symbol: SLC30A6
  hgvsc: ENST00000538303.1:c.4-43T>C
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000384041
  ensembl transcript: ENST00000406369
  gene symbol: SLC30A6
  hgvsc: ENST00000406369.1:c.-5+8117T>C
  variant of: http://identifiers.org/hgnc/19305
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 744
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 880
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10749
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5025
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 793
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8770
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4170
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2778
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12604
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6129
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1769
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1114
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2630
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7225
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3715
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: FS

2-32399092-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32399092
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 32399092
    reference: chr 2
allele count: 1
allele frequency: 8.267879288962381e-6
allele num: 120950
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000388013
  ensembl transcript: ENST00000449777
  gene symbol: SLC30A6
  hgvsc: ENST00000449777.1:c.90+2650A>T
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000440678
  ensembl transcript: ENST00000538303
  gene symbol: SLC30A6
  hgvsc: ENST00000538303.1:c.4-40A>T
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000384041
  ensembl transcript: ENST00000406369
  gene symbol: SLC30A6
  hgvsc: ENST00000406369.1:c.-5+8120A>T
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000415790
  ensembl transcript: ENST00000454324
  gene symbol: SLC30A6
  hgvsc: ENST00000454324.1:c.91-40A>T
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000282587
  ensembl transcript: ENST00000282587
  gene symbol: SLC30A6
  hgvsc: ENST00000282587.5:c.91-40A>T
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000396634
  ensembl transcript: ENST00000457724
  gene symbol: SLC30A6
  hgvsc: ENST00000457724.1:c.91-40A>T
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000368648
  ensembl transcript: ENST00000379343
  gene symbol: SLC30A6
  hgvsc: ENST00000379343.2:c.91-40A>T
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000399005
  ensembl transcript: ENST00000435660
  gene symbol: SLC30A6
  hgvsc: ENST00000435660.1:c.91-40A>T
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000393946
  ensembl transcript: ENST00000440718
  gene symbol: SLC30A6
  hgvsc: ENST00000440718.1:c.4-40A>T
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000349563
  ensembl transcript: ENST00000357055
  gene symbol: SLC30A6
  hgvsc: ENST00000357055.3:c.-484-40A>T
  variant of: http://identifiers.org/hgnc/19305
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2630
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 701
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2778
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5191
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 678
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 793
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1114
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8772
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1769
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12627
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10808
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6129
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4170
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1756
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 267
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: African
population: Latino
population: European (Finnish)
population: Other
reference allele: A
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum

2-32399101-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32399101
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 32399101
    reference: chr 2
allele count: 8
allele frequency: 6.611023882323775e-5
allele num: 121010
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000349563
  ensembl transcript: ENST00000357055
  gene symbol: SLC30A6
  hgvsc: ENST00000357055.3:c.-484-31G>A
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000415790
  ensembl transcript: ENST00000454324
  gene symbol: SLC30A6
  hgvsc: ENST00000454324.1:c.91-31G>A
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000399005
  ensembl transcript: ENST00000435660
  gene symbol: SLC30A6
  hgvsc: ENST00000435660.1:c.91-31G>A
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000388013
  ensembl transcript: ENST00000449777
  gene symbol: SLC30A6
  hgvsc: ENST00000449777.1:c.90+2659G>A
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000368648
  ensembl transcript: ENST00000379343
  gene symbol: SLC30A6
  hgvsc: ENST00000379343.2:c.91-31G>A
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000384041
  ensembl transcript: ENST00000406369
  gene symbol: SLC30A6
  hgvsc: ENST00000406369.1:c.-5+8129G>A
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000440678
  ensembl transcript: ENST00000538303
  gene symbol: SLC30A6
  hgvsc: ENST00000538303.1:c.4-31G>A
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000282587
  ensembl transcript: ENST00000282587
  gene symbol: SLC30A6
  hgvsc: ENST00000282587.5:c.91-31G>A
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000393946
  ensembl transcript: ENST00000440718
  gene symbol: SLC30A6
  hgvsc: ENST00000440718.1:c.4-31G>A
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000396634
  ensembl transcript: ENST00000457724
  gene symbol: SLC30A6
  hgvsc: ENST00000457724.1:c.91-31G>A
  variant of: http://identifiers.org/hgnc/19305
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 434
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5510
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8773
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6130
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 793
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4169
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11077
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2630
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12706
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1770
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2779
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1114
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 196
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2943
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: South Asian
population: African
population: European (Non-Finnish)
population: Other
population: Latino
reference allele: G
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: DP

2-32399106-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32399106
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 32399106
    reference: chr 2
allele count: 1
allele frequency: 8.261458643138033e-6
allele num: 121044
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000388013
  ensembl transcript: ENST00000449777
  gene symbol: SLC30A6
  hgvsc: ENST00000449777.1:c.90+2664C>T
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000368648
  ensembl transcript: ENST00000379343
  gene symbol: SLC30A6
  hgvsc: ENST00000379343.2:c.91-26C>T
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000349563
  ensembl transcript: ENST00000357055
  gene symbol: SLC30A6
  hgvsc: ENST00000357055.3:c.-484-26C>T
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000415790
  ensembl transcript: ENST00000454324
  gene symbol: SLC30A6
  hgvsc: ENST00000454324.1:c.91-26C>T
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000440678
  ensembl transcript: ENST00000538303
  gene symbol: SLC30A6
  hgvsc: ENST00000538303.1:c.4-26C>T
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000396634
  ensembl transcript: ENST00000457724
  gene symbol: SLC30A6
  hgvsc: ENST00000457724.1:c.91-26C>T
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000384041
  ensembl transcript: ENST00000406369
  gene symbol: SLC30A6
  hgvsc: ENST00000406369.1:c.-5+8134C>T
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000399005
  ensembl transcript: ENST00000435660
  gene symbol: SLC30A6
  hgvsc: ENST00000435660.1:c.91-26C>T
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000393946
  ensembl transcript: ENST00000440718
  gene symbol: SLC30A6
  hgvsc: ENST00000440718.1:c.4-26C>T
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000282587
  ensembl transcript: ENST00000282587
  gene symbol: SLC30A6
  hgvsc: ENST00000282587.5:c.91-26C>T
  variant of: http://identifiers.org/hgnc/19305
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11254
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2778
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1114
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 793
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4169
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2630
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12757
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5592
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6127
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1769
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8773
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2945
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum

2-32399107-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32399107
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 32399107
    reference: chr 2
allele count: 16
allele frequency: 1.321505855922824e-4
allele num: 121074
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000384041
  ensembl transcript: ENST00000406369
  gene symbol: SLC30A6
  hgvsc: ENST00000406369.1:c.-5+8135A>G
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000399005
  ensembl transcript: ENST00000435660
  gene symbol: SLC30A6
  hgvsc: ENST00000435660.1:c.91-25A>G
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000393946
  ensembl transcript: ENST00000440718
  gene symbol: SLC30A6
  hgvsc: ENST00000440718.1:c.4-25A>G
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000368648
  ensembl transcript: ENST00000379343
  gene symbol: SLC30A6
  hgvsc: ENST00000379343.2:c.91-25A>G
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000349563
  ensembl transcript: ENST00000357055
  gene symbol: SLC30A6
  hgvsc: ENST00000357055.3:c.-484-25A>G
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000396634
  ensembl transcript: ENST00000457724
  gene symbol: SLC30A6
  hgvsc: ENST00000457724.1:c.91-25A>G
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000388013
  ensembl transcript: ENST00000449777
  gene symbol: SLC30A6
  hgvsc: ENST00000449777.1:c.90+2665A>G
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000282587
  ensembl transcript: ENST00000282587
  gene symbol: SLC30A6
  hgvsc: ENST00000282587.5:c.91-25A>G
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000440678
  ensembl transcript: ENST00000538303
  gene symbol: SLC30A6
  hgvsc: ENST00000538303.1:c.4-25A>G
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000415790
  ensembl transcript: ENST00000454324
  gene symbol: SLC30A6
  hgvsc: ENST00000454324.1:c.91-25A>G
  variant of: http://identifiers.org/hgnc/19305
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1770
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4166
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 795
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2631
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5644
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6122
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12747
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11269
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 7.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 8771
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1111
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2780
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 590
  bin: 7.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3708
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: South Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
reference allele: A
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: QD

2-32399108-TAA-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32399108
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 32399106
    reference: chr 2
allele count: 2
allele frequency: 1.65188231990353e-5
allele num: 121074
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000368648
  ensembl transcript: ENST00000379343
  gene symbol: SLC30A6
  hgvsc: ENST00000379343.2:c.91-23_91-22delAA
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000349563
  ensembl transcript: ENST00000357055
  gene symbol: SLC30A6
  hgvsc: ENST00000357055.3:c.-484-23_-484-22delAA
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000440678
  ensembl transcript: ENST00000538303
  gene symbol: SLC30A6
  hgvsc: ENST00000538303.1:c.4-23_4-22delAA
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000282587
  ensembl transcript: ENST00000282587
  gene symbol: SLC30A6
  hgvsc: ENST00000282587.5:c.91-23_91-22delAA
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000396634
  ensembl transcript: ENST00000457724
  gene symbol: SLC30A6
  hgvsc: ENST00000457724.1:c.91-23_91-22delAA
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000393946
  ensembl transcript: ENST00000440718
  gene symbol: SLC30A6
  hgvsc: ENST00000440718.1:c.4-23_4-22delAA
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000388013
  ensembl transcript: ENST00000449777
  gene symbol: SLC30A6
  hgvsc: ENST00000449777.1:c.90+2667_90+2668delAA
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000415790
  ensembl transcript: ENST00000454324
  gene symbol: SLC30A6
  hgvsc: ENST00000454324.1:c.91-23_91-22delAA
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000399005
  ensembl transcript: ENST00000435660
  gene symbol: SLC30A6
  hgvsc: ENST00000435660.1:c.91-23_91-22delAA
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000384041
  ensembl transcript: ENST00000406369
  gene symbol: SLC30A6
  hgvsc: ENST00000406369.1:c.-5+8137_-5+8138delAA
  variant of: http://identifiers.org/hgnc/19305
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2629
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12756
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2778
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11281
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 794
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8775
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1770
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6124
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5659
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4165
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1111
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20222
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: South Asian
population: East Asian
population: Other
population: European (Finnish)
reference allele: TAA
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum

http://identifiers.org/exac.variant/2-32399109-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32399109
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 32399109
    reference: chr 2
allele count: 3
allele frequency: 2.477496077297878e-5
allele num: 121090
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000384041
  ensembl transcript: ENST00000406369
  gene symbol: SLC30A6
  hgvsc: ENST00000406369.1:c.-5+8137A>C
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000282587
  ensembl transcript: ENST00000282587
  gene symbol: SLC30A6
  hgvsc: ENST00000282587.5:c.91-23A>C
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000415790
  ensembl transcript: ENST00000454324
  gene symbol: SLC30A6
  hgvsc: ENST00000454324.1:c.91-23A>C
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000388013
  ensembl transcript: ENST00000449777
  gene symbol: SLC30A6
  hgvsc: ENST00000449777.1:c.90+2667A>C
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000368648
  ensembl transcript: ENST00000379343
  gene symbol: SLC30A6
  hgvsc: ENST00000379343.2:c.91-23A>C
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000440678
  ensembl transcript: ENST00000538303
  gene symbol: SLC30A6
  hgvsc: ENST00000538303.1:c.4-23A>C
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000349563
  ensembl transcript: ENST00000357055
  gene symbol: SLC30A6
  hgvsc: ENST00000357055.3:c.-484-23A>C
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000393946
  ensembl transcript: ENST00000440718
  gene symbol: SLC30A6
  hgvsc: ENST00000440718.1:c.4-23A>C
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000396634
  ensembl transcript: ENST00000457724
  gene symbol: SLC30A6
  hgvsc: ENST00000457724.1:c.91-23A>C
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000399005
  ensembl transcript: ENST00000435660
  gene symbol: SLC30A6
  hgvsc: ENST00000435660.1:c.91-23A>C
  variant of: http://identifiers.org/hgnc/19305
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11304
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5693
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8775
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2779
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4164
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6122
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1111
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1770
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2629
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12757
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 793
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 146
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Latino
population: South Asian
population: Other
reference allele: A
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP

2-32399117-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32399117
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 32399117
    reference: chr 2
allele count: 4
allele frequency: 3.300983693140556e-5
allele num: 121176
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000393946
  ensembl transcript: ENST00000440718
  gene symbol: SLC30A6
  hgvsc: ENST00000440718.1:c.4-15T>A
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000388013
  ensembl transcript: ENST00000449777
  gene symbol: SLC30A6
  hgvsc: ENST00000449777.1:c.90+2675T>A
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000399005
  ensembl transcript: ENST00000435660
  gene symbol: SLC30A6
  hgvsc: ENST00000435660.1:c.91-15T>A
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000440678
  ensembl transcript: ENST00000538303
  gene symbol: SLC30A6
  hgvsc: ENST00000538303.1:c.4-15T>A
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000368648
  ensembl transcript: ENST00000379343
  gene symbol: SLC30A6
  hgvsc: ENST00000379343.2:c.91-15T>A
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000384041
  ensembl transcript: ENST00000406369
  gene symbol: SLC30A6
  hgvsc: ENST00000406369.1:c.-5+8145T>A
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000396634
  ensembl transcript: ENST00000457724
  gene symbol: SLC30A6
  hgvsc: ENST00000457724.1:c.91-15T>A
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000282587
  ensembl transcript: ENST00000282587
  gene symbol: SLC30A6
  hgvsc: ENST00000282587.5:c.91-15T>A
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000415790
  ensembl transcript: ENST00000454324
  gene symbol: SLC30A6
  hgvsc: ENST00000454324.1:c.91-15T>A
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000349563
  ensembl transcript: ENST00000357055
  gene symbol: SLC30A6
  hgvsc: ENST00000357055.3:c.-484-15T>A
  variant of: http://identifiers.org/hgnc/19305
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8773
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5759
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1769
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11414
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4164
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6127
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2779
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12788
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2628
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 793
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1111
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: South Asian
population: Other
population: East Asian
population: European (Finnish)
population: Latino
reference allele: T
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: DP

2-32399119-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32399119
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 32399119
    reference: chr 2
allele count: 1
allele frequency: 8.250961236984109e-6
allele num: 121198
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000368648
  ensembl transcript: ENST00000379343
  gene symbol: SLC30A6
  hgvsc: ENST00000379343.2:c.91-13T>C
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000282587
  ensembl transcript: ENST00000282587
  gene symbol: SLC30A6
  hgvsc: ENST00000282587.5:c.91-13T>C
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000440678
  ensembl transcript: ENST00000538303
  gene symbol: SLC30A6
  hgvsc: ENST00000538303.1:c.4-13T>C
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000384041
  ensembl transcript: ENST00000406369
  gene symbol: SLC30A6
  hgvsc: ENST00000406369.1:c.-5+8147T>C
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000399005
  ensembl transcript: ENST00000435660
  gene symbol: SLC30A6
  hgvsc: ENST00000435660.1:c.91-13T>C
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000393946
  ensembl transcript: ENST00000440718
  gene symbol: SLC30A6
  hgvsc: ENST00000440718.1:c.4-13T>C
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000415790
  ensembl transcript: ENST00000454324
  gene symbol: SLC30A6
  hgvsc: ENST00000454324.1:c.91-13T>C
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000388013
  ensembl transcript: ENST00000449777
  gene symbol: SLC30A6
  hgvsc: ENST00000449777.1:c.90+2677T>C
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000396634
  ensembl transcript: ENST00000457724
  gene symbol: SLC30A6
  hgvsc: ENST00000457724.1:c.91-13T>C
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000349563
  ensembl transcript: ENST00000357055
  gene symbol: SLC30A6
  hgvsc: ENST00000357055.3:c.-484-13T>C
  variant of: http://identifiers.org/hgnc/19305
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11431
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6123
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4165
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5785
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12785
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1111
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 793
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1769
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2778
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8774
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2628
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7281
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2947
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: South Asian
population: African
population: East Asian
reference allele: T
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: QD

2-32399124-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32399124
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 32399124
    reference: chr 2
allele count: 1
allele frequency: 8.248102936324645e-6
allele num: 121240
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000384041
  ensembl transcript: ENST00000406369
  gene symbol: SLC30A6
  hgvsc: ENST00000406369.1:c.-5+8152T>C
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000368648
  ensembl transcript: ENST00000379343
  gene symbol: SLC30A6
  hgvsc: ENST00000379343.2:c.91-8T>C
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000388013
  ensembl transcript: ENST00000449777
  gene symbol: SLC30A6
  hgvsc: ENST00000449777.1:c.90+2682T>C
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000349563
  ensembl transcript: ENST00000357055
  gene symbol: SLC30A6
  hgvsc: ENST00000357055.3:c.-484-8T>C
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000440678
  ensembl transcript: ENST00000538303
  gene symbol: SLC30A6
  hgvsc: ENST00000538303.1:c.4-8T>C
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000399005
  ensembl transcript: ENST00000435660
  gene symbol: SLC30A6
  hgvsc: ENST00000435660.1:c.91-8T>C
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000282587
  ensembl transcript: ENST00000282587
  gene symbol: SLC30A6
  hgvsc: ENST00000282587.5:c.91-8T>C
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000396634
  ensembl transcript: ENST00000457724
  gene symbol: SLC30A6
  hgvsc: ENST00000457724.1:c.91-8T>C
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000415790
  ensembl transcript: ENST00000454324
  gene symbol: SLC30A6
  hgvsc: ENST00000454324.1:c.91-8T>C
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000393946
  ensembl transcript: ENST00000440718
  gene symbol: SLC30A6
  hgvsc: ENST00000440718.1:c.4-8T>C
  variant of: http://identifiers.org/hgnc/19305
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12794
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1111
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4164
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5823
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2778
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8773
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11452
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6124
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 793
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1769
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2628
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 3.75e1
  variant carriers: 0
hgvs: c.91-8T>C
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: African
population: South Asian
population: Other
population: Latino
population: European (Finnish)
reference allele: T
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum

2-32399136-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32399136
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 32399136
    reference: chr 2
allele count: 1
allele frequency: 8.24347940778844e-6
allele num: 121308
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: stop_gained
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000415790
  ensembl transcript: ENST00000454324
  gene symbol: SLC30A6
  hgvsc: ENST00000454324.1:c.95G>A
  hgvsp: ENSP00000415790.1:p.Trp32Ter
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000349563
  ensembl transcript: ENST00000357055
  gene symbol: SLC30A6
  hgvsc: ENST00000357055.3:c.-480G>A
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000384041
  ensembl transcript: ENST00000406369
  gene symbol: SLC30A6
  hgvsc: ENST00000406369.1:c.-5+8164G>A
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000388013
  ensembl transcript: ENST00000449777
  gene symbol: SLC30A6
  hgvsc: ENST00000449777.1:c.90+2694G>A
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000399005
  ensembl transcript: ENST00000435660
  gene symbol: SLC30A6
  hgvsc: ENST00000435660.1:c.95G>A
  hgvsp: ENSP00000399005.1:p.Trp32Ter
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000440678
  ensembl transcript: ENST00000538303
  gene symbol: SLC30A6
  hgvsc: ENST00000538303.1:c.8G>A
  hgvsp: ENSP00000440678.1:p.Trp3Ter
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: stop_gained
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000396634
  ensembl transcript: ENST00000457724
  gene symbol: SLC30A6
  hgvsc: ENST00000457724.1:c.95G>A
  hgvsp: ENSP00000396634.1:p.Trp32Ter
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000368648
  ensembl transcript: ENST00000379343
  gene symbol: SLC30A6
  hgvsc: ENST00000379343.2:c.95G>A
  hgvsp: ENSP00000368648.2:p.Trp32Ter
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000393946
  ensembl transcript: ENST00000440718
  gene symbol: SLC30A6
  hgvsc: ENST00000440718.1:c.8G>A
  hgvsp: ENSP00000393946.1:p.Trp3Ter
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000282587
  ensembl transcript: ENST00000282587
  gene symbol: SLC30A6
  hgvsc: ENST00000282587.5:c.95G>A
  hgvsp: ENSP00000282587.5:p.Trp32Ter
  variant of: http://identifiers.org/hgnc/19305
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2779
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11508
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12804
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4164
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6124
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8775
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 793
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5845
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1111
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1769
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2628
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Trp32Ter
num of homozygotes: 0
population: Latino
population: African
population: European (Non-Finnish)
population: Other
population: South Asian
population: East Asian
population: European (Finnish)
reference allele: G
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: DP

2-32399141-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32399141
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 32399141
    reference: chr 2
allele count: 1
allele frequency: 8.242528148233626e-6
allele num: 121322
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000368648
  ensembl transcript: ENST00000379343
  gene symbol: SLC30A6
  hgvsc: ENST00000379343.2:c.100A>T
  hgvsp: ENSP00000368648.2:p.Ile34Leu
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000415790
  ensembl transcript: ENST00000454324
  gene symbol: SLC30A6
  hgvsc: ENST00000454324.1:c.100A>T
  hgvsp: ENSP00000415790.1:p.Ile34Leu
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000384041
  ensembl transcript: ENST00000406369
  gene symbol: SLC30A6
  hgvsc: ENST00000406369.1:c.-5+8169A>T
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000396634
  ensembl transcript: ENST00000457724
  gene symbol: SLC30A6
  hgvsc: ENST00000457724.1:c.100A>T
  hgvsp: ENSP00000396634.1:p.Ile34Leu
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000440678
  ensembl transcript: ENST00000538303
  gene symbol: SLC30A6
  hgvsc: ENST00000538303.1:c.13A>T
  hgvsp: ENSP00000440678.1:p.Ile5Leu
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000393946
  ensembl transcript: ENST00000440718
  gene symbol: SLC30A6
  hgvsc: ENST00000440718.1:c.13A>T
  hgvsp: ENSP00000393946.1:p.Ile5Leu
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000388013
  ensembl transcript: ENST00000449777
  gene symbol: SLC30A6
  hgvsc: ENST00000449777.1:c.90+2699A>T
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000349563
  ensembl transcript: ENST00000357055
  gene symbol: SLC30A6
  hgvsc: ENST00000357055.3:c.-475A>T
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000399005
  ensembl transcript: ENST00000435660
  gene symbol: SLC30A6
  hgvsc: ENST00000435660.1:c.100A>T
  hgvsp: ENSP00000399005.1:p.Ile34Leu
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000282587
  ensembl transcript: ENST00000282587
  gene symbol: SLC30A6
  hgvsc: ENST00000282587.5:c.100A>T
  hgvsp: ENSP00000282587.5:p.Ile34Leu
  variant of: http://identifiers.org/hgnc/19305
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12803
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5856
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11516
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1769
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6124
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8774
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2628
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1111
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4164
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2779
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 793
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Ile34Leu
num of homozygotes: 0
population: Other
population: South Asian
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: A
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: MQ

2-32399149-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32399149
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 32399149
    reference: chr 2
allele count: 1
allele frequency: 8.241305422778968e-6
allele num: 121340
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000384041
  ensembl transcript: ENST00000406369
  gene symbol: SLC30A6
  hgvsc: ENST00000406369.1:c.-5+8177C>T
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000282587
  ensembl transcript: ENST00000282587
  gene symbol: SLC30A6
  hgvsc: ENST00000282587.5:c.108C>T
  hgvsp: ENST00000282587.5:c.108C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000393946
  ensembl transcript: ENST00000440718
  gene symbol: SLC30A6
  hgvsc: ENST00000440718.1:c.21C>T
  hgvsp: ENST00000440718.1:c.21C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000349563
  ensembl transcript: ENST00000357055
  gene symbol: SLC30A6
  hgvsc: ENST00000357055.3:c.-467C>T
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000388013
  ensembl transcript: ENST00000449777
  gene symbol: SLC30A6
  hgvsc: ENST00000449777.1:c.90+2707C>T
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000415790
  ensembl transcript: ENST00000454324
  gene symbol: SLC30A6
  hgvsc: ENST00000454324.1:c.108C>T
  hgvsp: ENST00000454324.1:c.108C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000440678
  ensembl transcript: ENST00000538303
  gene symbol: SLC30A6
  hgvsc: ENST00000538303.1:c.21C>T
  hgvsp: ENST00000538303.1:c.21C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000396634
  ensembl transcript: ENST00000457724
  gene symbol: SLC30A6
  hgvsc: ENST00000457724.1:c.108C>T
  hgvsp: ENST00000457724.1:c.108C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000368648
  ensembl transcript: ENST00000379343
  gene symbol: SLC30A6
  hgvsc: ENST00000379343.2:c.108C>T
  hgvsp: ENST00000379343.2:c.108C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000399005
  ensembl transcript: ENST00000435660
  gene symbol: SLC30A6
  hgvsc: ENST00000435660.1:c.108C>T
  hgvsp: ENST00000435660.1:c.108C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19305
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2628
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1111
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11525
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12800
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8775
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1769
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4165
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2778
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5864
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 793
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6123
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Leu36Leu
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: C
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff

2-32399154-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32399154
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 32399154
    reference: chr 2
allele count: 1
allele frequency: 8.240762105679534e-6
allele num: 121348
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000440678
  ensembl transcript: ENST00000538303
  gene symbol: SLC30A6
  hgvsc: ENST00000538303.1:c.26G>A
  hgvsp: ENSP00000440678.1:p.Gly9Asp
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000282587
  ensembl transcript: ENST00000282587
  gene symbol: SLC30A6
  hgvsc: ENST00000282587.5:c.113G>A
  hgvsp: ENSP00000282587.5:p.Gly38Asp
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000415790
  ensembl transcript: ENST00000454324
  gene symbol: SLC30A6
  hgvsc: ENST00000454324.1:c.113G>A
  hgvsp: ENSP00000415790.1:p.Gly38Asp
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000349563
  ensembl transcript: ENST00000357055
  gene symbol: SLC30A6
  hgvsc: ENST00000357055.3:c.-462G>A
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000388013
  ensembl transcript: ENST00000449777
  gene symbol: SLC30A6
  hgvsc: ENST00000449777.1:c.90+2712G>A
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000393946
  ensembl transcript: ENST00000440718
  gene symbol: SLC30A6
  hgvsc: ENST00000440718.1:c.26G>A
  hgvsp: ENSP00000393946.1:p.Gly9Asp
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000399005
  ensembl transcript: ENST00000435660
  gene symbol: SLC30A6
  hgvsc: ENST00000435660.1:c.113G>A
  hgvsp: ENSP00000399005.1:p.Gly38Asp
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000384041
  ensembl transcript: ENST00000406369
  gene symbol: SLC30A6
  hgvsc: ENST00000406369.1:c.-5+8182G>A
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000396634
  ensembl transcript: ENST00000457724
  gene symbol: SLC30A6
  hgvsc: ENST00000457724.1:c.113G>A
  hgvsp: ENSP00000396634.1:p.Gly38Asp
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000368648
  ensembl transcript: ENST00000379343
  gene symbol: SLC30A6
  hgvsc: ENST00000379343.2:c.113G>A
  hgvsp: ENSP00000368648.2:p.Gly38Asp
  variant of: http://identifiers.org/hgnc/19305
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4164
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 793
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8775
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5864
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1111
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1769
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6123
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11529
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12801
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2779
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2628
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Gly38Asp
num of homozygotes: 0
population: Latino
population: South Asian
population: African
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: East Asian
reference allele: G
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum

2-32399167-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32399167
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 32399167
    reference: chr 2
allele count: 4
allele frequency: 3.295815961636702e-5
allele num: 121366
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000399005
  ensembl transcript: ENST00000435660
  gene symbol: SLC30A6
  hgvsc: ENST00000435660.1:c.126G>A
  hgvsp: ENST00000435660.1:c.126G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000388013
  ensembl transcript: ENST00000449777
  gene symbol: SLC30A6
  hgvsc: ENST00000449777.1:c.90+2725G>A
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000396634
  ensembl transcript: ENST00000457724
  gene symbol: SLC30A6
  hgvsc: ENST00000457724.1:c.126G>A
  hgvsp: ENST00000457724.1:c.126G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000440678
  ensembl transcript: ENST00000538303
  gene symbol: SLC30A6
  hgvsc: ENST00000538303.1:c.39G>A
  hgvsp: ENST00000538303.1:c.39G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000368648
  ensembl transcript: ENST00000379343
  gene symbol: SLC30A6
  hgvsc: ENST00000379343.2:c.126G>A
  hgvsp: ENST00000379343.2:c.126G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000393946
  ensembl transcript: ENST00000440718
  gene symbol: SLC30A6
  hgvsc: ENST00000440718.1:c.39G>A
  hgvsp: ENST00000440718.1:c.39G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000415790
  ensembl transcript: ENST00000454324
  gene symbol: SLC30A6
  hgvsc: ENST00000454324.1:c.126G>A
  hgvsp: ENST00000454324.1:c.126G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000349563
  ensembl transcript: ENST00000357055
  gene symbol: SLC30A6
  hgvsc: ENST00000357055.3:c.-449G>A
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000282587
  ensembl transcript: ENST00000282587
  gene symbol: SLC30A6
  hgvsc: ENST00000282587.5:c.126G>A
  hgvsp: ENST00000282587.5:c.126G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000384041
  ensembl transcript: ENST00000406369
  gene symbol: SLC30A6
  hgvsc: ENST00000406369.1:c.-5+8195G>A
  variant of: http://identifiers.org/hgnc/19305
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1768
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4163
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8775
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2782
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5872
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11532
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2628
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1111
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6121
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 793
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12804
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Leu42Leu
num of homozygotes: 0
population: Other
population: African
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: European (Finnish)
population: Latino
reference allele: G
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP

2-32399175-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32399175
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 32399175
    reference: chr 2
allele count: 1
allele frequency: 8.239811473113496e-6
allele num: 121362
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000440678
  ensembl transcript: ENST00000538303
  gene symbol: SLC30A6
  hgvsc: ENST00000538303.1:c.47C>G
  hgvsp: ENSP00000440678.1:p.Thr16Ser
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000384041
  ensembl transcript: ENST00000406369
  gene symbol: SLC30A6
  hgvsc: ENST00000406369.1:c.-5+8203C>G
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000282587
  ensembl transcript: ENST00000282587
  gene symbol: SLC30A6
  hgvsc: ENST00000282587.5:c.134C>G
  hgvsp: ENSP00000282587.5:p.Thr45Ser
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000396634
  ensembl transcript: ENST00000457724
  gene symbol: SLC30A6
  hgvsc: ENST00000457724.1:c.134C>G
  hgvsp: ENSP00000396634.1:p.Thr45Ser
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000368648
  ensembl transcript: ENST00000379343
  gene symbol: SLC30A6
  hgvsc: ENST00000379343.2:c.134C>G
  hgvsp: ENSP00000368648.2:p.Thr45Ser
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000349563
  ensembl transcript: ENST00000357055
  gene symbol: SLC30A6
  hgvsc: ENST00000357055.3:c.-441C>G
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000393946
  ensembl transcript: ENST00000440718
  gene symbol: SLC30A6
  hgvsc: ENST00000440718.1:c.47C>G
  hgvsp: ENSP00000393946.1:p.Thr16Ser
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000399005
  ensembl transcript: ENST00000435660
  gene symbol: SLC30A6
  hgvsc: ENST00000435660.1:c.134C>G
  hgvsp: ENSP00000399005.1:p.Thr45Ser
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000388013
  ensembl transcript: ENST00000449777
  gene symbol: SLC30A6
  hgvsc: ENST00000449777.1:c.90+2733C>G
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000415790
  ensembl transcript: ENST00000454324
  gene symbol: SLC30A6
  hgvsc: ENST00000454324.1:c.134C>G
  hgvsp: ENSP00000415790.1:p.Thr45Ser
  variant of: http://identifiers.org/hgnc/19305
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 793
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2780
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1111
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5862
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11537
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8776
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1769
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12801
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4164
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2628
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6121
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Thr45Ser
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: Other
population: European (Finnish)
population: South Asian
population: African
population: East Asian
reference allele: C
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum

2-32399175-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32399175
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 32399175
    reference: chr 2
allele count: 1
allele frequency: 8.239811473113496e-6
allele num: 121362
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000282587
  ensembl transcript: ENST00000282587
  gene symbol: SLC30A6
  hgvsc: ENST00000282587.5:c.134C>T
  hgvsp: ENSP00000282587.5:p.Thr45Ile
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000399005
  ensembl transcript: ENST00000435660
  gene symbol: SLC30A6
  hgvsc: ENST00000435660.1:c.134C>T
  hgvsp: ENSP00000399005.1:p.Thr45Ile
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000388013
  ensembl transcript: ENST00000449777
  gene symbol: SLC30A6
  hgvsc: ENST00000449777.1:c.90+2733C>T
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000349563
  ensembl transcript: ENST00000357055
  gene symbol: SLC30A6
  hgvsc: ENST00000357055.3:c.-441C>T
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000384041
  ensembl transcript: ENST00000406369
  gene symbol: SLC30A6
  hgvsc: ENST00000406369.1:c.-5+8203C>T
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000368648
  ensembl transcript: ENST00000379343
  gene symbol: SLC30A6
  hgvsc: ENST00000379343.2:c.134C>T
  hgvsp: ENSP00000368648.2:p.Thr45Ile
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000440678
  ensembl transcript: ENST00000538303
  gene symbol: SLC30A6
  hgvsc: ENST00000538303.1:c.47C>T
  hgvsp: ENSP00000440678.1:p.Thr16Ile
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000415790
  ensembl transcript: ENST00000454324
  gene symbol: SLC30A6
  hgvsc: ENST00000454324.1:c.134C>T
  hgvsp: ENSP00000415790.1:p.Thr45Ile
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000396634
  ensembl transcript: ENST00000457724
  gene symbol: SLC30A6
  hgvsc: ENST00000457724.1:c.134C>T
  hgvsp: ENSP00000396634.1:p.Thr45Ile
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000393946
  ensembl transcript: ENST00000440718
  gene symbol: SLC30A6
  hgvsc: ENST00000440718.1:c.47C>T
  hgvsp: ENSP00000393946.1:p.Thr16Ile
  variant of: http://identifiers.org/hgnc/19305
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5862
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1111
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6121
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2628
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4164
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2780
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11537
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12801
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 793
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8776
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1769
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2679
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Thr45Ile
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
population: South Asian
population: East Asian
population: Other
reference allele: C
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum

2-32399187-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32399187
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 32399187
    reference: chr 2
allele count: 1
allele frequency: 8.239132584121543e-6
allele num: 121372
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000282587
  ensembl transcript: ENST00000282587
  gene symbol: SLC30A6
  hgvsc: ENST00000282587.5:c.146T>C
  hgvsp: ENSP00000282587.5:p.Leu49Pro
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000415790
  ensembl transcript: ENST00000454324
  gene symbol: SLC30A6
  hgvsc: ENST00000454324.1:c.146T>C
  hgvsp: ENSP00000415790.1:p.Leu49Pro
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000440678
  ensembl transcript: ENST00000538303
  gene symbol: SLC30A6
  hgvsc: ENST00000538303.1:c.59T>C
  hgvsp: ENSP00000440678.1:p.Leu20Pro
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000368648
  ensembl transcript: ENST00000379343
  gene symbol: SLC30A6
  hgvsc: ENST00000379343.2:c.146T>C
  hgvsp: ENSP00000368648.2:p.Leu49Pro
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000393946
  ensembl transcript: ENST00000440718
  gene symbol: SLC30A6
  hgvsc: ENST00000440718.1:c.59T>C
  hgvsp: ENSP00000393946.1:p.Leu20Pro
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000396634
  ensembl transcript: ENST00000457724
  gene symbol: SLC30A6
  hgvsc: ENST00000457724.1:c.146T>C
  hgvsp: ENSP00000396634.1:p.Leu49Pro
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000349563
  ensembl transcript: ENST00000357055
  gene symbol: SLC30A6
  hgvsc: ENST00000357055.3:c.-429T>C
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000384041
  ensembl transcript: ENST00000406369
  gene symbol: SLC30A6
  hgvsc: ENST00000406369.1:c.-5+8215T>C
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000399005
  ensembl transcript: ENST00000435660
  gene symbol: SLC30A6
  hgvsc: ENST00000435660.1:c.146T>C
  hgvsp: ENSP00000399005.1:p.Leu49Pro
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000388013
  ensembl transcript: ENST00000449777
  gene symbol: SLC30A6
  hgvsc: ENST00000449777.1:c.90+2745T>C
  variant of: http://identifiers.org/hgnc/19305
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2779
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2628
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4164
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8776
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1111
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11548
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12804
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5850
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 793
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1769
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6121
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7300
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Leu49Pro
num of homozygotes: 0
population: East Asian
population: Latino
population: Other
population: South Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
reference allele: T
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum

2-32399189-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32399189
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 32399189
    reference: chr 2
allele count: 1
allele frequency: 8.238996819747227e-6
allele num: 121374
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000349563
  ensembl transcript: ENST00000357055
  gene symbol: SLC30A6
  hgvsc: ENST00000357055.3:c.-427A>G
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000396634
  ensembl transcript: ENST00000457724
  gene symbol: SLC30A6
  hgvsc: ENST00000457724.1:c.148A>G
  hgvsp: ENSP00000396634.1:p.Met50Val
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000368648
  ensembl transcript: ENST00000379343
  gene symbol: SLC30A6
  hgvsc: ENST00000379343.2:c.148A>G
  hgvsp: ENSP00000368648.2:p.Met50Val
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000282587
  ensembl transcript: ENST00000282587
  gene symbol: SLC30A6
  hgvsc: ENST00000282587.5:c.148A>G
  hgvsp: ENSP00000282587.5:p.Met50Val
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000440678
  ensembl transcript: ENST00000538303
  gene symbol: SLC30A6
  hgvsc: ENST00000538303.1:c.61A>G
  hgvsp: ENSP00000440678.1:p.Met21Val
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000415790
  ensembl transcript: ENST00000454324
  gene symbol: SLC30A6
  hgvsc: ENST00000454324.1:c.148A>G
  hgvsp: ENSP00000415790.1:p.Met50Val
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000399005
  ensembl transcript: ENST00000435660
  gene symbol: SLC30A6
  hgvsc: ENST00000435660.1:c.148A>G
  hgvsp: ENSP00000399005.1:p.Met50Val
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000393946
  ensembl transcript: ENST00000440718
  gene symbol: SLC30A6
  hgvsc: ENST00000440718.1:c.61A>G
  hgvsp: ENSP00000393946.1:p.Met21Val
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000384041
  ensembl transcript: ENST00000406369
  gene symbol: SLC30A6
  hgvsc: ENST00000406369.1:c.-5+8217A>G
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000388013
  ensembl transcript: ENST00000449777
  gene symbol: SLC30A6
  hgvsc: ENST00000449777.1:c.90+2747A>G
  variant of: http://identifiers.org/hgnc/19305
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2779
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 793
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1111
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11549
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5851
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1768
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6121
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12804
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8774
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4164
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2628
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20811
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Met50Val
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Other
population: Latino
population: South Asian
population: African
population: European (Non-Finnish)
reference allele: A
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP

2-32399189-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32399189
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 32399189
    reference: chr 2
allele count: 1
allele frequency: 8.238996819747227e-6
allele num: 121374
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000396634
  ensembl transcript: ENST00000457724
  gene symbol: SLC30A6
  hgvsc: ENST00000457724.1:c.148A>T
  hgvsp: ENSP00000396634.1:p.Met50Leu
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000440678
  ensembl transcript: ENST00000538303
  gene symbol: SLC30A6
  hgvsc: ENST00000538303.1:c.61A>T
  hgvsp: ENSP00000440678.1:p.Met21Leu
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000384041
  ensembl transcript: ENST00000406369
  gene symbol: SLC30A6
  hgvsc: ENST00000406369.1:c.-5+8217A>T
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000368648
  ensembl transcript: ENST00000379343
  gene symbol: SLC30A6
  hgvsc: ENST00000379343.2:c.148A>T
  hgvsp: ENSP00000368648.2:p.Met50Leu
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000399005
  ensembl transcript: ENST00000435660
  gene symbol: SLC30A6
  hgvsc: ENST00000435660.1:c.148A>T
  hgvsp: ENSP00000399005.1:p.Met50Leu
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000415790
  ensembl transcript: ENST00000454324
  gene symbol: SLC30A6
  hgvsc: ENST00000454324.1:c.148A>T
  hgvsp: ENSP00000415790.1:p.Met50Leu
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000282587
  ensembl transcript: ENST00000282587
  gene symbol: SLC30A6
  hgvsc: ENST00000282587.5:c.148A>T
  hgvsp: ENSP00000282587.5:p.Met50Leu
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000388013
  ensembl transcript: ENST00000449777
  gene symbol: SLC30A6
  hgvsc: ENST00000449777.1:c.90+2747A>T
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000393946
  ensembl transcript: ENST00000440718
  gene symbol: SLC30A6
  hgvsc: ENST00000440718.1:c.61A>T
  hgvsp: ENSP00000393946.1:p.Met21Leu
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000349563
  ensembl transcript: ENST00000357055
  gene symbol: SLC30A6
  hgvsc: ENST00000357055.3:c.-427A>T
  variant of: http://identifiers.org/hgnc/19305
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1111
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4164
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8774
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1768
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6121
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11549
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 793
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2628
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5851
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12804
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2779
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Met50Leu
num of homozygotes: 0
population: Latino
population: Other
population: South Asian
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: A
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum

2-32399190-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32399190
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 32399190
    reference: chr 2
allele count: 1
allele frequency: 8.239132584121543e-6
allele num: 121372
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000282587
  ensembl transcript: ENST00000282587
  gene symbol: SLC30A6
  hgvsc: ENST00000282587.5:c.149T>C
  hgvsp: ENSP00000282587.5:p.Met50Thr
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000399005
  ensembl transcript: ENST00000435660
  gene symbol: SLC30A6
  hgvsc: ENST00000435660.1:c.149T>C
  hgvsp: ENSP00000399005.1:p.Met50Thr
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000368648
  ensembl transcript: ENST00000379343
  gene symbol: SLC30A6
  hgvsc: ENST00000379343.2:c.149T>C
  hgvsp: ENSP00000368648.2:p.Met50Thr
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000440678
  ensembl transcript: ENST00000538303
  gene symbol: SLC30A6
  hgvsc: ENST00000538303.1:c.62T>C
  hgvsp: ENSP00000440678.1:p.Met21Thr
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000393946
  ensembl transcript: ENST00000440718
  gene symbol: SLC30A6
  hgvsc: ENST00000440718.1:c.62T>C
  hgvsp: ENSP00000393946.1:p.Met21Thr
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000396634
  ensembl transcript: ENST00000457724
  gene symbol: SLC30A6
  hgvsc: ENST00000457724.1:c.149T>C
  hgvsp: ENSP00000396634.1:p.Met50Thr
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000415790
  ensembl transcript: ENST00000454324
  gene symbol: SLC30A6
  hgvsc: ENST00000454324.1:c.149T>C
  hgvsp: ENSP00000415790.1:p.Met50Thr
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000388013
  ensembl transcript: ENST00000449777
  gene symbol: SLC30A6
  hgvsc: ENST00000449777.1:c.90+2748T>C
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000349563
  ensembl transcript: ENST00000357055
  gene symbol: SLC30A6
  hgvsc: ENST00000357055.3:c.-426T>C
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000384041
  ensembl transcript: ENST00000406369
  gene symbol: SLC30A6
  hgvsc: ENST00000406369.1:c.-5+8218T>C
  variant of: http://identifiers.org/hgnc/19305
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2628
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6121
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2778
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1111
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8775
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 793
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11549
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4164
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5851
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12805
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1768
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3710
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Met50Thr
num of homozygotes: 0
population: Other
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Latino
population: South Asian
reference allele: T
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum

2-32399196-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32399196
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 32399196
    reference: chr 2
allele count: 1
allele frequency: 8.239268352970255e-6
allele num: 121370
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000282587
  ensembl transcript: ENST00000282587
  gene symbol: SLC30A6
  hgvsc: ENST00000282587.5:c.155G>A
  hgvsp: ENSP00000282587.5:p.Cys52Tyr
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000396634
  ensembl transcript: ENST00000457724
  gene symbol: SLC30A6
  hgvsc: ENST00000457724.1:c.155G>A
  hgvsp: ENSP00000396634.1:p.Cys52Tyr
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000368648
  ensembl transcript: ENST00000379343
  gene symbol: SLC30A6
  hgvsc: ENST00000379343.2:c.155G>A
  hgvsp: ENSP00000368648.2:p.Cys52Tyr
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000399005
  ensembl transcript: ENST00000435660
  gene symbol: SLC30A6
  hgvsc: ENST00000435660.1:c.155G>A
  hgvsp: ENSP00000399005.1:p.Cys52Tyr
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000440678
  ensembl transcript: ENST00000538303
  gene symbol: SLC30A6
  hgvsc: ENST00000538303.1:c.68G>A
  hgvsp: ENSP00000440678.1:p.Cys23Tyr
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000388013
  ensembl transcript: ENST00000449777
  gene symbol: SLC30A6
  hgvsc: ENST00000449777.1:c.90+2754G>A
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000415790
  ensembl transcript: ENST00000454324
  gene symbol: SLC30A6
  hgvsc: ENST00000454324.1:c.155G>A
  hgvsp: ENSP00000415790.1:p.Cys52Tyr
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000349563
  ensembl transcript: ENST00000357055
  gene symbol: SLC30A6
  hgvsc: ENST00000357055.3:c.-420G>A
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000384041
  ensembl transcript: ENST00000406369
  gene symbol: SLC30A6
  hgvsc: ENST00000406369.1:c.-5+8224G>A
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000393946
  ensembl transcript: ENST00000440718
  gene symbol: SLC30A6
  hgvsc: ENST00000440718.1:c.68G>A
  hgvsp: ENSP00000393946.1:p.Cys23Tyr
  variant of: http://identifiers.org/hgnc/19305
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1768
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11549
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 793
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8776
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2629
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5845
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6121
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4164
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2778
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12805
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1111
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Cys52Tyr
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: African
population: Other
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: ReadPosRankSum

2-32399198-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32399198
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 32399198
    reference: chr 2
allele count: 1
allele frequency: 8.239947264337508e-6
allele num: 121360
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000388013
  ensembl transcript: ENST00000449777
  gene symbol: SLC30A6
  hgvsc: ENST00000449777.1:c.90+2756A>T
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000349563
  ensembl transcript: ENST00000357055
  gene symbol: SLC30A6
  hgvsc: ENST00000357055.3:c.-418A>T
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000384041
  ensembl transcript: ENST00000406369
  gene symbol: SLC30A6
  hgvsc: ENST00000406369.1:c.-5+8226A>T
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000282587
  ensembl transcript: ENST00000282587
  gene symbol: SLC30A6
  hgvsc: ENST00000282587.5:c.157A>T
  hgvsp: ENSP00000282587.5:p.Ser53Cys
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000440678
  ensembl transcript: ENST00000538303
  gene symbol: SLC30A6
  hgvsc: ENST00000538303.1:c.70A>T
  hgvsp: ENSP00000440678.1:p.Ser24Cys
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000399005
  ensembl transcript: ENST00000435660
  gene symbol: SLC30A6
  hgvsc: ENST00000435660.1:c.157A>T
  hgvsp: ENSP00000399005.1:p.Ser53Cys
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000393946
  ensembl transcript: ENST00000440718
  gene symbol: SLC30A6
  hgvsc: ENST00000440718.1:c.70A>T
  hgvsp: ENSP00000393946.1:p.Ser24Cys
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000396634
  ensembl transcript: ENST00000457724
  gene symbol: SLC30A6
  hgvsc: ENST00000457724.1:c.157A>T
  hgvsp: ENSP00000396634.1:p.Ser53Cys
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000415790
  ensembl transcript: ENST00000454324
  gene symbol: SLC30A6
  hgvsc: ENST00000454324.1:c.157A>T
  hgvsp: ENSP00000415790.1:p.Ser53Cys
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000368648
  ensembl transcript: ENST00000379343
  gene symbol: SLC30A6
  hgvsc: ENST00000379343.2:c.157A>T
  hgvsp: ENSP00000368648.2:p.Ser53Cys
  variant of: http://identifiers.org/hgnc/19305
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2628
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5837
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11549
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6122
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12807
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4163
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2778
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1111
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8776
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1768
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 793
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20801
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Ser53Cys
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
population: South Asian
population: European (Finnish)
reference allele: A
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD

2-32399199-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32399199
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 32399199
    reference: chr 2
allele count: 2
allele frequency: 1.647989452867502e-5
allele num: 121360
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000399005
  ensembl transcript: ENST00000435660
  gene symbol: SLC30A6
  hgvsc: ENST00000435660.1:c.158G>A
  hgvsp: ENSP00000399005.1:p.Ser53Asn
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000368648
  ensembl transcript: ENST00000379343
  gene symbol: SLC30A6
  hgvsc: ENST00000379343.2:c.158G>A
  hgvsp: ENSP00000368648.2:p.Ser53Asn
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000440678
  ensembl transcript: ENST00000538303
  gene symbol: SLC30A6
  hgvsc: ENST00000538303.1:c.71G>A
  hgvsp: ENSP00000440678.1:p.Ser24Asn
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000384041
  ensembl transcript: ENST00000406369
  gene symbol: SLC30A6
  hgvsc: ENST00000406369.1:c.-5+8227G>A
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000396634
  ensembl transcript: ENST00000457724
  gene symbol: SLC30A6
  hgvsc: ENST00000457724.1:c.158G>A
  hgvsp: ENSP00000396634.1:p.Ser53Asn
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000349563
  ensembl transcript: ENST00000357055
  gene symbol: SLC30A6
  hgvsc: ENST00000357055.3:c.-417G>A
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000415790
  ensembl transcript: ENST00000454324
  gene symbol: SLC30A6
  hgvsc: ENST00000454324.1:c.158G>A
  hgvsp: ENSP00000415790.1:p.Ser53Asn
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000282587
  ensembl transcript: ENST00000282587
  gene symbol: SLC30A6
  hgvsc: ENST00000282587.5:c.158G>A
  hgvsp: ENSP00000282587.5:p.Ser53Asn
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000388013
  ensembl transcript: ENST00000449777
  gene symbol: SLC30A6
  hgvsc: ENST00000449777.1:c.90+2757G>A
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000393946
  ensembl transcript: ENST00000440718
  gene symbol: SLC30A6
  hgvsc: ENST00000440718.1:c.71G>A
  hgvsp: ENSP00000393946.1:p.Ser24Asn
  variant of: http://identifiers.org/hgnc/19305
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8777
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11549
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5838
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1768
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4163
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12806
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1112
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2627
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 793
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6121
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2778
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20802
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Ser53Asn
num of homozygotes: 0
population: Latino
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Other
reference allele: G
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum

2-32399207-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32399207
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 32399207
    reference: chr 2
allele count: 5
allele frequency: 4.120245236996506e-5
allele num: 121352
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000396634
  ensembl transcript: ENST00000457724
  gene symbol: SLC30A6
  hgvsc: ENST00000457724.1:c.166A>G
  hgvsp: ENSP00000396634.1:p.Asn56Asp
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000440678
  ensembl transcript: ENST00000538303
  gene symbol: SLC30A6
  hgvsc: ENST00000538303.1:c.79A>G
  hgvsp: ENSP00000440678.1:p.Asn27Asp
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000368648
  ensembl transcript: ENST00000379343
  gene symbol: SLC30A6
  hgvsc: ENST00000379343.2:c.166A>G
  hgvsp: ENSP00000368648.2:p.Asn56Asp
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000384041
  ensembl transcript: ENST00000406369
  gene symbol: SLC30A6
  hgvsc: ENST00000406369.1:c.-5+8235A>G
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000399005
  ensembl transcript: ENST00000435660
  gene symbol: SLC30A6
  hgvsc: ENST00000435660.1:c.166A>G
  hgvsp: ENSP00000399005.1:p.Asn56Asp
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000393946
  ensembl transcript: ENST00000440718
  gene symbol: SLC30A6
  hgvsc: ENST00000440718.1:c.79A>G
  hgvsp: ENSP00000393946.1:p.Asn27Asp
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000388013
  ensembl transcript: ENST00000449777
  gene symbol: SLC30A6
  hgvsc: ENST00000449777.1:c.90+2765A>G
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000349563
  ensembl transcript: ENST00000357055
  gene symbol: SLC30A6
  hgvsc: ENST00000357055.3:c.-409A>G
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000415790
  ensembl transcript: ENST00000454324
  gene symbol: SLC30A6
  hgvsc: ENST00000454324.1:c.166A>G
  hgvsp: ENSP00000415790.1:p.Asn56Asp
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000282587
  ensembl transcript: ENST00000282587
  gene symbol: SLC30A6
  hgvsc: ENST00000282587.5:c.166A>G
  hgvsp: ENSP00000282587.5:p.Asn56Asp
  variant of: http://identifiers.org/hgnc/19305
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5822
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6122
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2779
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8778
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1112
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12806
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2628
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11543
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4163
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1770
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 792
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Asn56Asp
num of homozygotes: 0
population: Latino
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Other
reference allele: A
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum

2-32399213-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32399213
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 32399213
    reference: chr 2
allele count: 1
allele frequency: 8.241169586787756e-6
allele num: 121342
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000415790
  ensembl transcript: ENST00000454324
  gene symbol: SLC30A6
  hgvsc: ENST00000454324.1:c.172A>G
  hgvsp: ENSP00000415790.1:p.Ile58Val
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000282587
  ensembl transcript: ENST00000282587
  gene symbol: SLC30A6
  hgvsc: ENST00000282587.5:c.172A>G
  hgvsp: ENSP00000282587.5:p.Ile58Val
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000393946
  ensembl transcript: ENST00000440718
  gene symbol: SLC30A6
  hgvsc: ENST00000440718.1:c.85A>G
  hgvsp: ENSP00000393946.1:p.Ile29Val
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000388013
  ensembl transcript: ENST00000449777
  gene symbol: SLC30A6
  hgvsc: ENST00000449777.1:c.90+2771A>G
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000384041
  ensembl transcript: ENST00000406369
  gene symbol: SLC30A6
  hgvsc: ENST00000406369.1:c.-5+8241A>G
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000440678
  ensembl transcript: ENST00000538303
  gene symbol: SLC30A6
  hgvsc: ENST00000538303.1:c.85A>G
  hgvsp: ENSP00000440678.1:p.Ile29Val
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000349563
  ensembl transcript: ENST00000357055
  gene symbol: SLC30A6
  hgvsc: ENST00000357055.3:c.-403A>G
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000368648
  ensembl transcript: ENST00000379343
  gene symbol: SLC30A6
  hgvsc: ENST00000379343.2:c.172A>G
  hgvsp: ENSP00000368648.2:p.Ile58Val
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000396634
  ensembl transcript: ENST00000457724
  gene symbol: SLC30A6
  hgvsc: ENST00000457724.1:c.172A>G
  hgvsp: ENSP00000396634.1:p.Ile58Val
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000399005
  ensembl transcript: ENST00000435660
  gene symbol: SLC30A6
  hgvsc: ENST00000435660.1:c.172A>G
  hgvsp: ENSP00000399005.1:p.Ile58Val
  variant of: http://identifiers.org/hgnc/19305
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2778
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 792
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2627
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11553
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12809
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4163
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1769
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6124
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5791
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8776
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1111
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Ile58Val
num of homozygotes: 0
population: European (Finnish)
population: Other
population: South Asian
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
reference allele: A
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff

2-32399214-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32399214
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 32399214
    reference: chr 2
allele count: 1
allele frequency: 8.241577108195424e-6
allele num: 121336
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000282587
  ensembl transcript: ENST00000282587
  gene symbol: SLC30A6
  hgvsc: ENST00000282587.5:c.173T>C
  hgvsp: ENSP00000282587.5:p.Ile58Thr
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000440678
  ensembl transcript: ENST00000538303
  gene symbol: SLC30A6
  hgvsc: ENST00000538303.1:c.86T>C
  hgvsp: ENSP00000440678.1:p.Ile29Thr
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000396634
  ensembl transcript: ENST00000457724
  gene symbol: SLC30A6
  hgvsc: ENST00000457724.1:c.173T>C
  hgvsp: ENSP00000396634.1:p.Ile58Thr
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000388013
  ensembl transcript: ENST00000449777
  gene symbol: SLC30A6
  hgvsc: ENST00000449777.1:c.90+2772T>C
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000415790
  ensembl transcript: ENST00000454324
  gene symbol: SLC30A6
  hgvsc: ENST00000454324.1:c.173T>C
  hgvsp: ENSP00000415790.1:p.Ile58Thr
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000349563
  ensembl transcript: ENST00000357055
  gene symbol: SLC30A6
  hgvsc: ENST00000357055.3:c.-402T>C
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000399005
  ensembl transcript: ENST00000435660
  gene symbol: SLC30A6
  hgvsc: ENST00000435660.1:c.173T>C
  hgvsp: ENSP00000399005.1:p.Ile58Thr
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000384041
  ensembl transcript: ENST00000406369
  gene symbol: SLC30A6
  hgvsc: ENST00000406369.1:c.-5+8242T>C
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000368648
  ensembl transcript: ENST00000379343
  gene symbol: SLC30A6
  hgvsc: ENST00000379343.2:c.173T>C
  hgvsp: ENSP00000368648.2:p.Ile58Thr
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000393946
  ensembl transcript: ENST00000440718
  gene symbol: SLC30A6
  hgvsc: ENST00000440718.1:c.86T>C
  hgvsp: ENSP00000393946.1:p.Ile29Thr
  variant of: http://identifiers.org/hgnc/19305
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1111
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2627
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11551
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12805
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2777
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6125
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 792
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4164
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5790
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8777
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Ile58Thr
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: South Asian
population: Other
population: Latino
reference allele: T
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: DP

2-32399227-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32399227
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 32399227
    reference: chr 2
allele count: 1
allele frequency: 8.245926512302922e-6
allele num: 121272
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000396634
  ensembl transcript: ENST00000457724
  gene symbol: SLC30A6
  hgvsc: ENST00000457724.1:c.175+11T>G
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000388013
  ensembl transcript: ENST00000449777
  gene symbol: SLC30A6
  hgvsc: ENST00000449777.1:c.90+2785T>G
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000393946
  ensembl transcript: ENST00000440718
  gene symbol: SLC30A6
  hgvsc: ENST00000440718.1:c.88+11T>G
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000349563
  ensembl transcript: ENST00000357055
  gene symbol: SLC30A6
  hgvsc: ENST00000357055.3:c.-400+11T>G
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000368648
  ensembl transcript: ENST00000379343
  gene symbol: SLC30A6
  hgvsc: ENST00000379343.2:c.175+11T>G
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000440678
  ensembl transcript: ENST00000538303
  gene symbol: SLC30A6
  hgvsc: ENST00000538303.1:c.88+11T>G
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000384041
  ensembl transcript: ENST00000406369
  gene symbol: SLC30A6
  hgvsc: ENST00000406369.1:c.-5+8255T>G
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000282587
  ensembl transcript: ENST00000282587
  gene symbol: SLC30A6
  hgvsc: ENST00000282587.5:c.175+11T>G
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000415790
  ensembl transcript: ENST00000454324
  gene symbol: SLC30A6
  hgvsc: ENST00000454324.1:c.175+11T>G
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000399005
  ensembl transcript: ENST00000435660
  gene symbol: SLC30A6
  hgvsc: ENST00000435660.1:c.175+11T>G
  variant of: http://identifiers.org/hgnc/19305
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2627
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1769
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 792
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6125
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12806
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11523
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5656
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2778
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8782
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1111
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4164
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
population: Latino
population: Other
population: South Asian
reference allele: T
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff

2-32399232-A-AT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32399232
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 32399233
    reference: chr 2
allele count: 1
allele frequency: 8.248102936324645e-6
allele num: 121240
alternate allele: AT
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000396634
  ensembl transcript: ENST00000457724
  gene symbol: SLC30A6
  hgvsc: ENST00000457724.1:c.175+21dupT
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000415790
  ensembl transcript: ENST00000454324
  gene symbol: SLC30A6
  hgvsc: ENST00000454324.1:c.175+21dupT
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000393946
  ensembl transcript: ENST00000440718
  gene symbol: SLC30A6
  hgvsc: ENST00000440718.1:c.88+21dupT
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000384041
  ensembl transcript: ENST00000406369
  gene symbol: SLC30A6
  hgvsc: ENST00000406369.1:c.-5+8265dupT
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000368648
  ensembl transcript: ENST00000379343
  gene symbol: SLC30A6
  hgvsc: ENST00000379343.2:c.175+21dupT
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000440678
  ensembl transcript: ENST00000538303
  gene symbol: SLC30A6
  hgvsc: ENST00000538303.1:c.88+21dupT
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000282587
  ensembl transcript: ENST00000282587
  gene symbol: SLC30A6
  hgvsc: ENST00000282587.5:c.175+21dupT
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000349563
  ensembl transcript: ENST00000357055
  gene symbol: SLC30A6
  hgvsc: ENST00000357055.3:c.-400+21dupT
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000388013
  ensembl transcript: ENST00000449777
  gene symbol: SLC30A6
  hgvsc: ENST00000449777.1:c.90+2795dupT
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000399005
  ensembl transcript: ENST00000435660
  gene symbol: SLC30A6
  hgvsc: ENST00000435660.1:c.175+21dupT
  variant of: http://identifiers.org/hgnc/19305
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1769
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6124
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5565
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8787
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2777
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2627
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11493
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 793
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4161
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12793
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1111
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 209
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2947
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: South Asian
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: A
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP

2-32399246-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32399246
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 32399246
    reference: chr 2
allele count: 1
allele frequency: 8.264462809917356e-6
allele num: 121000
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000399005
  ensembl transcript: ENST00000435660
  gene symbol: SLC30A6
  hgvsc: ENST00000435660.1:c.175+30G>T
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000388013
  ensembl transcript: ENST00000449777
  gene symbol: SLC30A6
  hgvsc: ENST00000449777.1:c.90+2804G>T
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000415790
  ensembl transcript: ENST00000454324
  gene symbol: SLC30A6
  hgvsc: ENST00000454324.1:c.175+30G>T
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000282587
  ensembl transcript: ENST00000282587
  gene symbol: SLC30A6
  hgvsc: ENST00000282587.5:c.175+30G>T
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000440678
  ensembl transcript: ENST00000538303
  gene symbol: SLC30A6
  hgvsc: ENST00000538303.1:c.88+30G>T
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000349563
  ensembl transcript: ENST00000357055
  gene symbol: SLC30A6
  hgvsc: ENST00000357055.3:c.-400+30G>T
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000396634
  ensembl transcript: ENST00000457724
  gene symbol: SLC30A6
  hgvsc: ENST00000457724.1:c.175+30G>T
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000393946
  ensembl transcript: ENST00000440718
  gene symbol: SLC30A6
  hgvsc: ENST00000440718.1:c.88+30G>T
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000384041
  ensembl transcript: ENST00000406369
  gene symbol: SLC30A6
  hgvsc: ENST00000406369.1:c.-5+8274G>T
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000368648
  ensembl transcript: ENST00000379343
  gene symbol: SLC30A6
  hgvsc: ENST00000379343.2:c.175+30G>T
  variant of: http://identifiers.org/hgnc/19305
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 595
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1769
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2777
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4686
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4162
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12653
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11140
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1003
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8756
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6122
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 792
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1110
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2627
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3695
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2642
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: Other
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: African
reference allele: G
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum

2-32399252-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32399252
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 32399252
    reference: chr 2
allele count: 1
allele frequency: 8.277734549608463e-6
allele num: 120806
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000349563
  ensembl transcript: ENST00000357055
  gene symbol: SLC30A6
  hgvsc: ENST00000357055.3:c.-400+36T>C
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000399005
  ensembl transcript: ENST00000435660
  gene symbol: SLC30A6
  hgvsc: ENST00000435660.1:c.175+36T>C
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000396634
  ensembl transcript: ENST00000457724
  gene symbol: SLC30A6
  hgvsc: ENST00000457724.1:c.175+36T>C
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000368648
  ensembl transcript: ENST00000379343
  gene symbol: SLC30A6
  hgvsc: ENST00000379343.2:c.175+36T>C
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000440678
  ensembl transcript: ENST00000538303
  gene symbol: SLC30A6
  hgvsc: ENST00000538303.1:c.88+36T>C
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000384041
  ensembl transcript: ENST00000406369
  gene symbol: SLC30A6
  hgvsc: ENST00000406369.1:c.-5+8280T>C
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000388013
  ensembl transcript: ENST00000449777
  gene symbol: SLC30A6
  hgvsc: ENST00000449777.1:c.90+2810T>C
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000282587
  ensembl transcript: ENST00000282587
  gene symbol: SLC30A6
  hgvsc: ENST00000282587.5:c.175+36T>C
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000415790
  ensembl transcript: ENST00000454324
  gene symbol: SLC30A6
  hgvsc: ENST00000454324.1:c.175+36T>C
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000393946
  ensembl transcript: ENST00000440718
  gene symbol: SLC30A6
  hgvsc: ENST00000440718.1:c.88+36T>C
  variant of: http://identifiers.org/hgnc/19305
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 6095
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1110
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1514
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3751
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2615
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12088
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 792
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4157
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10181
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8634
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2625
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1767
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2777
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4241
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 878
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 289
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: Latino
population: East Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
reference allele: T
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum

2-32399256-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32399256
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 32399256
    reference: chr 2
allele count: 1
allele frequency: 8.281162012653616e-6
allele num: 120756
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000396634
  ensembl transcript: ENST00000457724
  gene symbol: SLC30A6
  hgvsc: ENST00000457724.1:c.175+40C>G
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000399005
  ensembl transcript: ENST00000435660
  gene symbol: SLC30A6
  hgvsc: ENST00000435660.1:c.175+40C>G
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000415790
  ensembl transcript: ENST00000454324
  gene symbol: SLC30A6
  hgvsc: ENST00000454324.1:c.175+40C>G
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000368648
  ensembl transcript: ENST00000379343
  gene symbol: SLC30A6
  hgvsc: ENST00000379343.2:c.175+40C>G
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000388013
  ensembl transcript: ENST00000449777
  gene symbol: SLC30A6
  hgvsc: ENST00000449777.1:c.90+2814C>G
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000282587
  ensembl transcript: ENST00000282587
  gene symbol: SLC30A6
  hgvsc: ENST00000282587.5:c.175+40C>G
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000393946
  ensembl transcript: ENST00000440718
  gene symbol: SLC30A6
  hgvsc: ENST00000440718.1:c.88+40C>G
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000349563
  ensembl transcript: ENST00000357055
  gene symbol: SLC30A6
  hgvsc: ENST00000357055.3:c.-400+40C>G
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000384041
  ensembl transcript: ENST00000406369
  gene symbol: SLC30A6
  hgvsc: ENST00000406369.1:c.-5+8284C>G
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000440678
  ensembl transcript: ENST00000538303
  gene symbol: SLC30A6
  hgvsc: ENST00000538303.1:c.88+40C>G
  variant of: http://identifiers.org/hgnc/19305
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2624
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8597
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 792
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11922
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1519
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9928
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1768
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3720
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3091
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1109
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4154
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2777
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6090
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1067
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Other
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD

2-32399261-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32399261
    reference: chr 2
  end: Position
    type: ExactPosition
    position: 32399261
    reference: chr 2
allele count: 1
allele frequency: 8.301648707433296e-6
allele num: 120458
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000396634
  ensembl transcript: ENST00000457724
  gene symbol: SLC30A6
  hgvsc: ENST00000457724.1:c.175+45A>G
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000384041
  ensembl transcript: ENST00000406369
  gene symbol: SLC30A6
  hgvsc: ENST00000406369.1:c.-5+8289A>G
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000282587
  ensembl transcript: ENST00000282587
  gene symbol: SLC30A6
  hgvsc: ENST00000282587.5:c.175+45A>G
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000388013
  ensembl transcript: ENST00000449777
  gene symbol: SLC30A6
  hgvsc: ENST00000449777.1:c.90+2819A>G
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000368648
  ensembl transcript: ENST00000379343
  gene symbol: SLC30A6
  hgvsc: ENST00000379343.2:c.175+45A>G
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000440678
  ensembl transcript: ENST00000538303
  gene symbol: SLC30A6
  hgvsc: ENST00000538303.1:c.88+45A>G
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000415790
  ensembl transcript: ENST00000454324
  gene symbol: SLC30A6
  hgvsc: ENST00000454324.1:c.175+45A>G
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000399005
  ensembl transcript: ENST00000435660
  gene symbol: SLC30A6
  hgvsc: ENST00000435660.1:c.175+45A>G
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000393946
  ensembl transcript: ENST00000440718
  gene symbol: SLC30A6
  hgvsc: ENST00000440718.1:c.88+45A>G
  variant of: http://identifiers.org/hgnc/19305
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152683
  ensembl protein: ENSP00000349563
  ensembl transcript: ENST00000357055
  gene symbol: SLC30A6
  hgvsc: ENST00000357055.3:c.-400+45A>G
  variant of: http://identifiers.org/hgnc/19305
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 792
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6750
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3946
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10178
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1769
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1472
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4147
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8269
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2623
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1109
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2777
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6028
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8120
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
reference allele: A

GenotypeQuality
all individuals: 3300
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 806
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8234
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2568
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 131
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36173
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1187
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2072
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6040
bin: 9.75e1
variant carriers: 1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16474
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66644
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.158748551564311e-4
allele num: 8630
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10380
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.947e0

DP
type: SiteQuality
SIO_000300: 1.855651e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.02e-1

FS
type: SiteQuality
SIO_000300: 1.229e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.11e0

VQSLOD
type: SiteQuality
SIO_000300: 8.33e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.78e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.4e-3

QD
type: SiteQuality
SIO_000300: 1.142e1

GenotypeQuality
all individuals: 18
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8237
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1189
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 808
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6040
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 121
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36206
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2074
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3303
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10378
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.068697657482704e-5
allele num: 16478
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8630
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.399999999999999e-3

MQRankSum
type: SiteQuality
SIO_000300: -1.091e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.305e0

VQSLOD
type: SiteQuality
SIO_000300: -3.038e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.25e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 6.275e0

QD
type: SiteQuality
SIO_000300: 1.399e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.4e-2

DP
type: SiteQuality
SIO_000300: 1.855885e6

GenotypeQuality
all individuals: 36246
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3305
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 102
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8240
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2567
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6042
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 1187
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2073
bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66668
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10384
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16484
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

East Asian
type: Population
allele count: 3
allele frequency: 3.475440222428174e-4
allele num: 8632
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.856624e6

VQSLOD
type: SiteQuality
SIO_000300: 4.43e-1

QD
type: SiteQuality
SIO_000300: 1.116e1

MQ
type: SiteQuality
SIO_000300: 5.913e1

FS
type: SiteQuality
SIO_000300: 2.533e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.58e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.36e0

MQRankSum
type: SiteQuality
SIO_000300: 5.21e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.02e-1

GenotypeQuality
all individuals: 20
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3309
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2071
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 91
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1188
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 806
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8237
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6039
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 36278
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2569
bin: 7.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16486
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499745043342632e-5
allele num: 66678
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10382
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.16e0

MQ
type: SiteQuality
SIO_000300: 5.951e1

DP
type: SiteQuality
SIO_000300: 1.857054e6

QD
type: SiteQuality
SIO_000300: 1.088e1

FS
type: SiteQuality
SIO_000300: 2.955e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.870000000000001e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.65e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.178e0

VQSLOD
type: SiteQuality
SIO_000300: 1.29e-1

GenotypeQuality
all individuals: 74
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36315
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3311
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 806
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2571
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2071
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8241
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6038
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1188
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66694
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.63020030816641e-5
allele num: 10384
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16488
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.08e0

DP
type: SiteQuality
SIO_000300: 1.857529e6

FS
type: SiteQuality
SIO_000300: 5.241e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.1e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 1.35e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

QD
type: SiteQuality
SIO_000300: 1.593e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.7e-2

MQ
type: SiteQuality
SIO_000300: 5.984e1

VQSLOD
type: SiteQuality
SIO_000300: 1.05e0

GenotypeQuality
all individuals: 12
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2071
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2572
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1186
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 805
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36338
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8234
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3304
bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66704
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

African
type: Population
allele count: 13
allele frequency: 1.251684960523782e-3
allele num: 10386
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16492
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 2.39e0

MQ
type: SiteQuality
SIO_000300: 5.975e1

FS
type: SiteQuality
SIO_000300: 1.179e0

QD
type: SiteQuality
SIO_000300: 1.164e1

MQRankSum
type: SiteQuality
SIO_000300: -1.17e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.78e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.96e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.937e0

DP
type: SiteQuality
SIO_000300: 1.85844e6

GenotypeQuality
all individuals: 1186
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2071
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3304
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36338
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 805
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8234
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2572
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6047
bin: 9.75e1
variant carriers: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.158211721102618e-4
allele num: 8634
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16492
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66704
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10386
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.17e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.96e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.39e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.937e0

FS
type: SiteQuality
SIO_000300: 1.179e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.78e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.975e1

DP
type: SiteQuality
SIO_000300: 1.85844e6

QD
type: SiteQuality
SIO_000300: 1.164e1

GenotypeQuality
all individuals: 3301
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1186
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2071
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36356
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8236
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6038
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 2574
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 806
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10386
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66706
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.212709192335678e-4
allele num: 16492
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 8.03e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.48e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.045e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.4e-2

QD
type: SiteQuality
SIO_000300: 9.710000000000001e0

FS
type: SiteQuality
SIO_000300: 2.945e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

DP
type: SiteQuality
SIO_000300: 1.858143e6

VQSLOD
type: SiteQuality
SIO_000300: 7.05e-1

GenotypeQuality
all individuals: 2574
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 806
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1186
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36356
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8236
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6038
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2071
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3301
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499115521842113e-5
allele num: 66706
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16492
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10386
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.4e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 8.03e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.05e-1

FS
type: SiteQuality
SIO_000300: 2.945e0

DP
type: SiteQuality
SIO_000300: 1.858143e6

MQRankSum
type: SiteQuality
SIO_000300: 2.48e-1

QD
type: SiteQuality
SIO_000300: 9.710000000000001e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.045e0

GenotypeQuality
all individuals: 7
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2070
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1186
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2576
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3301
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8244
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6036
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 5
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 806
bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10390
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.062810719049351e-5
allele num: 16494
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66708
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 9.94e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.4e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.858234e6

FS
type: SiteQuality
SIO_000300: 1.141e0

QD
type: SiteQuality
SIO_000300: 7.83e0

MQ
type: SiteQuality
SIO_000300: 5.939e1

VQSLOD
type: SiteQuality
SIO_000300: -1.282e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.51e0

BaseQRankSum
type: SiteQuality
SIO_000300: -8.42e-1

GenotypeQuality
all individuals: 5
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 806
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3301
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8245
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2575
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6036
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 36399
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1186
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10390
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.49907057624273e-5
allele num: 66708
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16494
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 5.18e-1

DP
type: SiteQuality
SIO_000300: 1.858253e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.69e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.086e0

VQSLOD
type: SiteQuality
SIO_000300: 7.56e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.951e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.01e-1

QD
type: SiteQuality
SIO_000300: 8.84e0

FS
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
all individuals: 6
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36396
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8244
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6036
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1186
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2575
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 806
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2069
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3299
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 3.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.622786759045419e-5
allele num: 10392
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66708
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16494
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.425e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.22e0

DP
type: SiteQuality
SIO_000300: 1.858368e6

MQ
type: SiteQuality
SIO_000300: 5.921e1

QD
type: SiteQuality
SIO_000300: 1.368e1

MQRankSum
type: SiteQuality
SIO_000300: 2.42e0

VQSLOD
type: SiteQuality
SIO_000300: -4.249e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.03e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.63e-1

GenotypeQuality
all individuals: 10
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 805
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2069
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1186
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8246
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3300
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6036
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2575
bin: 7.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16494
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10392
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.103752759381898e-3
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66710
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.42e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 1.72e0

QD
type: SiteQuality
SIO_000300: 1.362e1

VQSLOD
type: SiteQuality
SIO_000300: -2.876e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.3e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.858356e6

ClippingRankSum
type: SiteQuality
SIO_000300: -3.28e-1

GenotypeQuality
all individuals: 8
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36374
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1186
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2576
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3300
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8243
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 805
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2069
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 3.25e1
variant carriers: 1

GenotypeQuality
all individuals: 6035
bin: 9.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.49902563333833e-5
allele num: 66710
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10394
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16494
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 4.27e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.27e-1

MQ
type: SiteQuality
SIO_000300: 5.968e1

DP
type: SiteQuality
SIO_000300: 1.858694e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 1.96e-1

FS
type: SiteQuality
SIO_000300: 1.824e0

MQRankSum
type: SiteQuality
SIO_000300: 1.18e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.87e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.44e-1

GenotypeQuality
all individuals: 6036
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 2579
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1185
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2067
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8243
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3300
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36398
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 805
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 5.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10392
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.99805126667666e-5
allele num: 66710
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16496
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.858658e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

FS
type: SiteQuality
SIO_000300: 3.76e-1

MQ
type: SiteQuality
SIO_000300: 5.943e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.93e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.54e0

QD
type: SiteQuality
SIO_000300: 1.283e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.87e-1

MQRankSum
type: SiteQuality
SIO_000300: -8.129999999999999e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.57e-1

GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8239
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 805
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36398
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6036
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 5
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2068
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2578
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1185
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3298
bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.99805126667666e-5
allele num: 66710
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10392
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16496
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.858732e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 1.08e0

BaseQRankSum
type: SiteQuality
SIO_000300: -9.8e-1

QD
type: SiteQuality
SIO_000300: 1.205e1

MQRankSum
type: SiteQuality
SIO_000300: 5.52e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.3e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.19e-1

FS
type: SiteQuality
SIO_000300: 2.927e0

MQ
type: SiteQuality
SIO_000300: 5.943e1

GenotypeQuality
all individuals: 8
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2570
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1186
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 804
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36392
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2064
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6036
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 8240
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3300
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 5.25e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.062075654704171e-5
allele num: 16496
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.49748141041017e-5
allele num: 66704
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10394
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.967e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.21e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.31e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.7e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.94e-1

QD
type: SiteQuality
SIO_000300: 1.263e1

VQSLOD
type: SiteQuality
SIO_000300: 9.45e-1

FS
type: SiteQuality
SIO_000300: 3.343e0

DP
type: SiteQuality
SIO_000300: 1.858728e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

GenotypeQuality
all individuals: 3297
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2569
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6037
bin: 9.75e1
variant carriers: 10

GenotypeQuality
all individuals: 8241
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36404
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1184
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2062
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 804
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16498
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.512401693889897e-4
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.924187030979411e-4
allele num: 10394
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.640055296353897e-5
allele num: 11574
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 8.994962820820341e-5
allele num: 66704
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.973e1

MQRankSum
type: SiteQuality
SIO_000300: -5.2e-2

FS
type: SiteQuality
SIO_000300: 5.34e-1

QD
type: SiteQuality
SIO_000300: 1.206e1

BaseQRankSum
type: SiteQuality
SIO_000300: 8.699999999999999e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -5.47e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.16e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.43e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

DP
type: SiteQuality
SIO_000300: 1.859186e6

GenotypeQuality
all individuals: 8233
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1184
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6035
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 77
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2059
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3292
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 803
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2565
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10392
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66694
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16492
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.157943492357573e-4
allele num: 8636
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.858314e6

FS
type: SiteQuality
SIO_000300: 5.407e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.964e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.92e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.86e-1

QD
type: SiteQuality
SIO_000300: 1.096e1

VQSLOD
type: SiteQuality
SIO_000300: 4.24e-1

MQ
type: SiteQuality
SIO_000300: 5.931e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.03e-1

GenotypeQuality
all individuals: 3292
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2059
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36387
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1184
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8233
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 77
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2565
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6035
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 10
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 803
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 4.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10392
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.819063788503517e-4
allele num: 16492
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66694
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.407e0

QD
type: SiteQuality
SIO_000300: 1.096e1

MQRankSum
type: SiteQuality
SIO_000300: -1.86e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.03e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.24e-1

MQ
type: SiteQuality
SIO_000300: 5.931e1

DP
type: SiteQuality
SIO_000300: 1.858314e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.964e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.92e-1

GenotypeQuality
all individuals: 82
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3292
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2565
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6032
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 36378
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2059
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 804
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1184
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.624639076034648e-5
allele num: 10390
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16492
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66688
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.193e1

VQSLOD
type: SiteQuality
SIO_000300: 1.32e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.927e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.58e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.049e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.53e0

MQRankSum
type: SiteQuality
SIO_000300: -3.59e-1

DP
type: SiteQuality
SIO_000300: 1.858021e6

GenotypeQuality
all individuals: 8232
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2562
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36356
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 100
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2060
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3289
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1184
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6032
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 11
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 803
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 5.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16492
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66674
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.624639076034648e-5
allele num: 10390
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.591e1

MQRankSum
type: SiteQuality
SIO_000300: -7.85e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.98e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.11e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

DP
type: SiteQuality
SIO_000300: 1.857748e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.38e-1

MQ
type: SiteQuality
SIO_000300: 5.956e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.01e-1

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1184
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2562
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 124
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2060
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3287
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 802
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36301
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8227
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6030
bin: 9.75e1
variant carriers: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66662
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.647526807333103e-5
allele num: 11564
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16488
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10384
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 4.96e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.54e-1

FS
type: SiteQuality
SIO_000300: 1.377e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

QD
type: SiteQuality
SIO_000300: 7.78e0

VQSLOD
type: SiteQuality
SIO_000300: -5.847e-1

MQ
type: SiteQuality
SIO_000300: 5.89e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.205e0

DP
type: SiteQuality
SIO_000300: 1.857387e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.77e-1

GenotypeQuality
all individuals: 33
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36145
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6030
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 206
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8207
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2056
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3288
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1184
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2557
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 801
bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11544
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10376
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500780405811022e-5
allele num: 66632
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16476
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.856024e6

MQRankSum
type: SiteQuality
SIO_000300: 4.11e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.52e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

QD
type: SiteQuality
SIO_000300: 1.214e1

VQSLOD
type: SiteQuality
SIO_000300: 3.18e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.18e-1

MQ
type: SiteQuality
SIO_000300: 5.984e1

FS
type: SiteQuality
SIO_000300: 1.965e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.23e0

GenotypeQuality
all individuals: 33
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2556
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6042
bin: 9.75e1
variant carriers: 15

GenotypeQuality
all individuals: 15
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 36122
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8201
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 211
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3281
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1183
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 800
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2054
bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.664009703690868e-5
allele num: 11542
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.159285879897983e-4
allele num: 8626
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10376
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66630
num of homozygotes: 0

South Asian
type: Population
allele count: 13
allele frequency: 7.888349514563106e-4
allele num: 16480
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.15e-1

DP
type: SiteQuality
SIO_000300: 1.856379e6

MQ
type: SiteQuality
SIO_000300: 5.974e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.46e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.73e-1

FS
type: SiteQuality
SIO_000300: 6.12e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.053e0

VQSLOD
type: SiteQuality
SIO_000300: 2.08e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

QD
type: SiteQuality
SIO_000300: 1.255e1

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 295
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1184
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6027
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 800
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8192
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2053
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 82
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 81
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3280
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35968
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2555
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10366
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.50159168718842e-5
allele num: 66596
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8628
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11536
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16466
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.27e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -2.298e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.099999999999999e-2

DP
type: SiteQuality
SIO_000300: 1.853801e6

QD
type: SiteQuality
SIO_000300: 1.746e1

MQ
type: SiteQuality
SIO_000300: 5.968e1

MQRankSum
type: SiteQuality
SIO_000300: 1.15e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.45e-1

GenotypeQuality
all individuals: 3273
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35649
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 89
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1184
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2549
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 141
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 463
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8170
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6027
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 137
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 800
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2051
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10350
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16452
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11526
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.160092807424594e-4
allele num: 8620
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66558
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.73e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.38e0

MQ
type: SiteQuality
SIO_000300: 5.949e1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -6.293e-1

QD
type: SiteQuality
SIO_000300: 1.525e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-2

DP
type: SiteQuality
SIO_000300: 1.849987e6

MQRankSum
type: SiteQuality
SIO_000300: 2.11e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.23e-1

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1184
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 188
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 262
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 98
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 866
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 316
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3264
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2541
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34750
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8129
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6028
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 800
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66438
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16426
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.934610176049526e-4
allele num: 10338
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11510
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.841715e6

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -1.081e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.23e0

VQSLOD
type: SiteQuality
SIO_000300: -4.97e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.5e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.1e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.984e0

QD
type: SiteQuality
SIO_000300: 1.079e1

GenotypeQuality
all individuals: 97
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 162
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 589
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8027
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1180
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 354
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2042
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2527
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 112
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 465
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 208
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1325
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33487
bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6586
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66340
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16418
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10312
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11496
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

East Asian
type: Population
allele count: 16
allele frequency: 1.860897883228658e-3
allele num: 8598
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.84e-1

FS
type: SiteQuality
SIO_000300: 8.169999999999999e-1

MQ
type: SiteQuality
SIO_000300: 5.936e1

QD
type: SiteQuality
SIO_000300: 1.411e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

DP
type: SiteQuality
SIO_000300: 1.831616e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.62e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.19e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.71e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.826e0

GenotypeQuality
all individuals: 9
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 103
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 495
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 800
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33352
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 120
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6023
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2040
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8005
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2515
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 163
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 159
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1410
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1180
bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16416
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66320
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.698677800974252e-5
allele num: 11496
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8596
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6588
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10306
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.972e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.24e0

MQ
type: SiteQuality
SIO_000300: 5.893e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 4.07e-1

FS
type: SiteQuality
SIO_000300: 5.97e0

VQSLOD
type: SiteQuality
SIO_000300: -3.922e-1

DP
type: SiteQuality
SIO_000300: 1.829459e6

ClippingRankSum
type: SiteQuality
SIO_000300: -7.1e-1

QD
type: SiteQuality
SIO_000300: 1.211e1

GenotypeQuality
all individuals: 2511
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 318
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3213
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1772
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1139
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 276
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29302
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1265
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2033
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 797
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1178
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 276
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 252
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2489
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7784
bin: 6.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8570
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11488
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16402
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6586
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.511030522816561e-5
allele num: 66180
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10298
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 4.289e0

VQSLOD
type: SiteQuality
SIO_000300: 7.69e-1

DP
type: SiteQuality
SIO_000300: 1.793653e6

MQRankSum
type: SiteQuality
SIO_000300: 8.48e-1

QD
type: SiteQuality
SIO_000300: 1.431e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 9.03e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.09e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.2e-2

GenotypeQuality
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6022
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 293
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1414
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2030
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28753
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 268
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2603
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 298
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1178
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3206
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7761
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 796
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1218
bin: 2.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16404
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8570
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66158
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11488
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.518372304889159e-4
allele num: 6586
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10298
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.789269e6

FS
type: SiteQuality
SIO_000300: 1.0962e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.21e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.16e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.05e-1

MQRankSum
type: SiteQuality
SIO_000300: -5.34e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.056e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

MQ
type: SiteQuality
SIO_000300: 5.956e1

QD
type: SiteQuality
SIO_000300: 1.272e1

GenotypeQuality
all individuals: 143
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2885
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2712
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5163
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 164
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4325
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4327
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1960
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3152
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2293
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2029
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5460
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1175
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1963
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 884
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14917
bin: 6.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10152
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11390
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6568
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65530
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8462
num of homozygotes: 0

South Asian
type: Population
allele count: 11
allele frequency: 6.739370175223625e-4
allele num: 16322
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.14e-1

MQRankSum
type: SiteQuality
SIO_000300: -9.0e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -3.188e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.7e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.187e1

FS
type: SiteQuality
SIO_000300: 1.7918e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.9e-3

VQSLOD
type: SiteQuality
SIO_000300: -2.252e0

DP
type: SiteQuality
SIO_000300: 1.714769e6

GenotypeQuality
all individuals: 33
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1968
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2053
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 153
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 784
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15594
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3191
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4338
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5475
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 249
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1967
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 468
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4308
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6017
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1175
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2031
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2701
bin: 4.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6572
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11402
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10174
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.048222886057428e-5
allele num: 65612
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16336
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8478
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.05e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.713904e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.5e-3

VQSLOD
type: SiteQuality
SIO_000300: 4.36e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.98e-1

QD
type: SiteQuality
SIO_000300: 1.231e1

ClippingRankSum
type: SiteQuality
SIO_000300: 9.5e-1

MQRankSum
type: SiteQuality
SIO_000300: 9.4e-2

GenotypeQuality
all individuals: 369
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 227
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2964
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 755
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 502
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4389
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16915
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 391
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17185
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2668
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7122
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3773
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1776
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10362
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16314
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.505162708088744e-5
allele num: 66438
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.77e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.237e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.15e-1

DP
type: SiteQuality
SIO_000300: 2.525588e6

MQRankSum
type: SiteQuality
SIO_000300: 3.2e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.61e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.1e-3

QD
type: SiteQuality
SIO_000300: 1.243e1

GenotypeQuality
all individuals: 21
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 364
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17482
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 731
bin: 4.75e1
variant carriers: 1

GenotypeQuality
all individuals: 373
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 289
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4348
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 489
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 219
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3731
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7165
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2670
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1761
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17173
bin: 9.75e1
variant carriers: 4

African
type: Population
allele count: 3
allele frequency: 2.893518518518518e-4
allele num: 10368
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.009147809340395e-5
allele num: 66464
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16348
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.97e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.19e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.94e0

DP
type: SiteQuality
SIO_000300: 2.526672e6

QD
type: SiteQuality
SIO_000300: 1.353e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.3e-3

VQSLOD
type: SiteQuality
SIO_000300: 5.8e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.28e-1

GenotypeQuality
all individuals: 248
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 180
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 358
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18771
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 398
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2662
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17171
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 20
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 276
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4339
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 190
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2949
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 98
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1756
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 317
bin: 3.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.102770657878677e-5
allele num: 16386
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10372
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66506
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 8.119999999999999e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.34e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.66e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 3.26e-1

DP
type: SiteQuality
SIO_000300: 2.531492e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.56e0

VQSLOD
type: SiteQuality
SIO_000300: -2.951e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
all individuals: 203
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17170
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 7
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4332
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 186
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7220
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 145
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 294
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 87
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 370
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19008
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3709
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2947
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 295
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2662
bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.158480074142725e-4
allele num: 8632
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66506
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16378
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10372
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.89e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.386e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.22e0

VQSLOD
type: SiteQuality
SIO_000300: -2.35e-2

MQ
type: SiteQuality
SIO_000300: 5.968e1

DP
type: SiteQuality
SIO_000300: 2.533497e6

MQRankSum
type: SiteQuality
SIO_000300: -9.19e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.15e0

GenotypeQuality
all individuals: 17172
bin: 9.75e1
variant carriers: 8

GenotypeQuality
all individuals: 140
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 106
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2672
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 116
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 89
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 210
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1752
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4314
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3710
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7224
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 204
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19755
bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16412
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10376
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 8
allele frequency: 1.202465053359387e-4
allele num: 66530
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.1e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.48e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.104e0

VQSLOD
type: SiteQuality
SIO_000300: 3.56e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.84e-1

FS
type: SiteQuality
SIO_000300: 1.104e0

QD
type: SiteQuality
SIO_000300: 1.475e1

MQ
type: SiteQuality
SIO_000300: 5.954e1

MQRankSum
type: SiteQuality
SIO_000300: 8.799999999999999e-2

DP
type: SiteQuality
SIO_000300: 2.540766e6

GenotypeQuality
all individuals: 4308
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 138
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3710
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7252
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2669
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1752
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 107
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 133
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 17166
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 57
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 164
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20083
bin: 6.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16424
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.50271992306074e-5
allele num: 66546
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10376
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.95e-1

MQ
type: SiteQuality
SIO_000300: 5.991e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-3

FS
type: SiteQuality
SIO_000300: 1.299e0

QD
type: SiteQuality
SIO_000300: 1.52e1

VQSLOD
type: SiteQuality
SIO_000300: -7.335e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.775e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.44e0

DP
type: SiteQuality
SIO_000300: 2.544535e6

MQRankSum
type: SiteQuality
SIO_000300: -1.044e0

GenotypeQuality
all individuals: 12
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 99
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2669
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7269
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 123
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17169
bin: 9.75e1
variant carriers: 16

GenotypeQuality
all individuals: 46
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 104
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20183
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 157
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2946
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4312
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1753
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 16
allele frequency: 1.383843625670299e-3
allele num: 11562
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10378
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16436
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66558
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.123e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.13e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.557e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

DP
type: SiteQuality
SIO_000300: 2.545354e6

VQSLOD
type: SiteQuality
SIO_000300: 2.25e0

MQRankSum
type: SiteQuality
SIO_000300: 3.48e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.75e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.383e1

GenotypeQuality
all individuals: 115
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 94
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17155
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 7271
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1752
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 153
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4318
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2946
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2670
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3712
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66560
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10376
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.21654501216545e-4
allele num: 16440
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.7e-3

FS
type: SiteQuality
SIO_000300: 2.555e0

VQSLOD
type: SiteQuality
SIO_000300: 1.71e0

DP
type: SiteQuality
SIO_000300: 2.545127e6

MQRankSum
type: SiteQuality
SIO_000300: 1.5e0

QD
type: SiteQuality
SIO_000300: 1.502e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.18e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.69e-1

MQ
type: SiteQuality
SIO_000300: 6.116e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.91e-1

GenotypeQuality
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3711
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20295
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 105
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 80
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4318
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2670
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1751
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 87
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7273
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2946
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17153
bin: 9.75e1
variant carriers: 3

African
type: Population
allele count: 3
allele frequency: 2.89073039121218e-4
allele num: 10378
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66564
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16446
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.51e0

MQRankSum
type: SiteQuality
SIO_000300: 8.090000000000001e-1

MQ
type: SiteQuality
SIO_000300: 5.982e1

QD
type: SiteQuality
SIO_000300: 1.517e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.69e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.0e-4

FS
type: SiteQuality
SIO_000300: 1.244e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.56e0

BaseQRankSum
type: SiteQuality
SIO_000300: 6.33e0

DP
type: SiteQuality
SIO_000300: 2.545771e6

GenotypeQuality
all individuals: 3712
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 111
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20540
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4318
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2947
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7276
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2676
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17154
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 1751
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10390
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.006186371963122e-5
allele num: 66598
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16472
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 9.753e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 3.91e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.15e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.18e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.76e-1

MQ
type: SiteQuality
SIO_000300: 5.99e1

QD
type: SiteQuality
SIO_000300: 1.29e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.13e-1

DP
type: SiteQuality
SIO_000300: 2.548648e6

GenotypeQuality
all individuals: 40
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17151
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 11
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4320
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20590
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 105
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1751
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2679
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3710
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66610
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16476
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.620935154897056e-5
allele num: 10394
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.93e1

VQSLOD
type: SiteQuality
SIO_000300: -2.717e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.71e-1

FS
type: SiteQuality
SIO_000300: 2.973e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 1.9e0

BaseQRankSum
type: SiteQuality
SIO_000300: 7.52e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.22e0

DP
type: SiteQuality
SIO_000300: 2.548858e6

QD
type: SiteQuality
SIO_000300: 1.268e1

GenotypeQuality
all individuals: 1751
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7286
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17151
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 82
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3711
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20664
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2679
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4321
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2948
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.50105073551486e-5
allele num: 66620
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16496
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.7e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.91e1

FS
type: SiteQuality
SIO_000300: 2.295e0

VQSLOD
type: SiteQuality
SIO_000300: -5.439000000000001e-1

QD
type: SiteQuality
SIO_000300: 1.52e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.57e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.4e-2

DP
type: SiteQuality
SIO_000300: 2.549726e6

ClippingRankSum
type: SiteQuality
SIO_000300: -5.6e-2

GenotypeQuality
all individuals: 2948
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7296
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 20757
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17149
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 5
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1750
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3710
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2678
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4322
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.5001500150015e-5
allele num: 66660
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.1e0

MQRankSum
type: SiteQuality
SIO_000300: -7.93e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.6e0

MQ
type: SiteQuality
SIO_000300: 5.934e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -3.511e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.14e-1

QD
type: SiteQuality
SIO_000300: 1.177e1

DP
type: SiteQuality
SIO_000300: 2.551201e6

GenotypeQuality
all individuals: 4
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20780
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2680
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7297
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1750
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3712
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4322
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17148
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2948
bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499970000599988e-5
allele num: 66668
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 4.2e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.5e-1

QD
type: SiteQuality
SIO_000300: 1.175e1

VQSLOD
type: SiteQuality
SIO_000300: -3.017e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.22e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

DP
type: SiteQuality
SIO_000300: 2.551363e6

ClippingRankSum
type: SiteQuality
SIO_000300: -9.9e-2

MQ
type: SiteQuality
SIO_000300: 5.806e1

GenotypeQuality
all individuals: 5
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2948
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4323
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20794
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17147
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7297
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2679
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3711
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1750
bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499610101373643e-5
allele num: 66684
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.551482e6

BaseQRankSum
type: SiteQuality
SIO_000300: -4.026e0

VQSLOD
type: SiteQuality
SIO_000300: 5.43e-1

MQ
type: SiteQuality
SIO_000300: 5.98e1

QD
type: SiteQuality
SIO_000300: 9.289999999999999e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.34e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.0e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -6.4e-1

FS
type: SiteQuality
SIO_000300: 5.728e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

GenotypeQuality
all individuals: 30
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2948
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4324
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2679
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20794
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7303
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3711
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17146
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1750
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66692
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155802126675913e-4
allele num: 8652
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.198e0

MQ
type: SiteQuality
SIO_000300: 5.952e1

MQRankSum
type: SiteQuality
SIO_000300: 9.26e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 2.24e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.86e-1

DP
type: SiteQuality
SIO_000300: 2.551584e6

BaseQRankSum
type: SiteQuality
SIO_000300: -3.601e0

QD
type: SiteQuality
SIO_000300: 8.52e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.55e-1

GenotypeQuality
all individuals: 0
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20807
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2948
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3711
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7302
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17145
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 18
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4325
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2678
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1750
bin: 8.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66710
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 4
allele frequency: 3.455425017277125e-4
allele num: 11576
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.248e1

MQ
type: SiteQuality
SIO_000300: 5.947e1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.06e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.175e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 1.26e0

FS
type: SiteQuality
SIO_000300: 1.739e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.02e0

MQRankSum
type: SiteQuality
SIO_000300: 1.62e-1

DP
type: SiteQuality
SIO_000300: 2.552099e6

GenotypeQuality
all individuals: 7303
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2679
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1750
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4324
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2948
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17145
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 20802
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3710
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66710
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.05913717886573e-5
allele num: 16504
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 7.95e0

DP
type: SiteQuality
SIO_000300: 2.551754e6

BaseQRankSum
type: SiteQuality
SIO_000300: -5.9e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.81e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 1.759e0

VQSLOD
type: SiteQuality
SIO_000300: -1.252e0

MQRankSum
type: SiteQuality
SIO_000300: -6.55e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.78e-1

GenotypeQuality
all individuals: 21
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3710
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20802
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7303
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4324
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2948
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1750
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17145
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4
bin: 2.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.49902563333833e-5
allele num: 66710
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.9e-1

DP
type: SiteQuality
SIO_000300: 2.551754e6

VQSLOD
type: SiteQuality
SIO_000300: -1.252e0

QD
type: SiteQuality
SIO_000300: 7.95e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.81e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

FS
type: SiteQuality
SIO_000300: 1.759e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.78e-1

MQRankSum
type: SiteQuality
SIO_000300: -6.55e-1

GenotypeQuality
all individuals: 20810
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17144
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1751
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4323
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2677
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2948
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3709
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 5.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498845888665727e-5
allele num: 66718
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.74e0

DP
type: SiteQuality
SIO_000300: 2.55179e6

QD
type: SiteQuality
SIO_000300: 1.35e1

MQ
type: SiteQuality
SIO_000300: 5.945e1

VQSLOD
type: SiteQuality
SIO_000300: -3.362e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 9.370000000000001e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

FS
type: SiteQuality
SIO_000300: 1.053e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.948e0

MQRankSum
type: SiteQuality
SIO_000300: 5.15e-1

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1750
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2948
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3709
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17144
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7300
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2677
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4322
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 5.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.05913717886573e-5
allele num: 16504
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66718
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 4.95e-1

QD
type: SiteQuality
SIO_000300: 1.029e1

FS
type: SiteQuality
SIO_000300: 2.585e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.15e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.74e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.96e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 4.75e-1

DP
type: SiteQuality
SIO_000300: 2.552108e6

GenotypeQuality
all individuals: 2948
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17144
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1750
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2677
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3709
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4322
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7300
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20811
bin: 6.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498845888665727e-5
allele num: 66718
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.96e0

DP
type: SiteQuality
SIO_000300: 2.552108e6

QD
type: SiteQuality
SIO_000300: 1.029e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.74e0

FS
type: SiteQuality
SIO_000300: 2.585e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 4.75e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 4.95e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.15e-1

GenotypeQuality
all individuals: 0
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1750
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20813
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 17142
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2677
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7300
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2948
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4323
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.613535858488752e-5
allele num: 10402
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66718
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.04e0

QD
type: SiteQuality
SIO_000300: 1.808e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -8.250999999999999e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.62e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -3.54e-1

DP
type: SiteQuality
SIO_000300: 2.551729e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.870000000000001e-1

GenotypeQuality
all individuals: 1
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4322
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17142
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1750
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7300
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2677
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2948
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20807
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3709
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 2.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.05913717886573e-5
allele num: 16504
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66718
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

FS
type: SiteQuality
SIO_000300: 3.618e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.139e0

QD
type: SiteQuality
SIO_000300: 1.051e1

VQSLOD
type: SiteQuality
SIO_000300: 5.05e-1

MQRankSum
type: SiteQuality
SIO_000300: 9.8e-1

MQ
type: SiteQuality
SIO_000300: 5.97e1

DP
type: SiteQuality
SIO_000300: 2.551667e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.79e0

GenotypeQuality
all individuals: 3
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4322
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2678
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7299
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2948
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1750
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17141
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3709
bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66710
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.638562543192812e-5
allele num: 11576
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.831e1

MQRankSum
type: SiteQuality
SIO_000300: -3.64e-1

DP
type: SiteQuality
SIO_000300: 2.551596e6

BaseQRankSum
type: SiteQuality
SIO_000300: -3.576e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.372e0

QD
type: SiteQuality
SIO_000300: 1.088e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.82e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

FS
type: SiteQuality
SIO_000300: 3.797e0

VQSLOD
type: SiteQuality
SIO_000300: -2.798e0

GenotypeQuality
all individuals: 4
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3709
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7300
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2948
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17141
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 3
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4322
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1750
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2678
bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.311604253351826e-4
allele num: 8652
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66710
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.953e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.219e0

DP
type: SiteQuality
SIO_000300: 2.551628e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -6.5e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.46e0

FS
type: SiteQuality
SIO_000300: 1.98e0

VQSLOD
type: SiteQuality
SIO_000300: 5.09e-1

QD
type: SiteQuality
SIO_000300: 1.116e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.5e-1

GenotypeQuality
all individuals: 3
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4320
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2676
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20782
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1750
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7295
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2948
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3709
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17141
bin: 9.75e1
variant carriers: 5

Latino
type: Population
allele count: 3
allele frequency: 2.591568762957844e-4
allele num: 11576
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.99805126667666e-5
allele num: 66710
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.969e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.74e-1

DP
type: SiteQuality
SIO_000300: 2.551636e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 3.108e1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.26e0

MQRankSum
type: SiteQuality
SIO_000300: 3.1e-1

FS
type: SiteQuality
SIO_000300: 2.154e0

VQSLOD
type: SiteQuality
SIO_000300: 2.01e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.29e-1

GenotypeQuality
all individuals: 10
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2675
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 20764
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3709
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7300
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2948
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1751
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4318
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17138
bin: 9.75e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10396
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499160470136723e-5
allele num: 66704
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -7.61e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.34e0

VQSLOD
type: SiteQuality
SIO_000300: -2.097e0

QD
type: SiteQuality
SIO_000300: 1.003e1

DP
type: SiteQuality
SIO_000300: 2.551159e6

FS
type: SiteQuality
SIO_000300: 1.4548e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.65e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.6e-2

MQ
type: SiteQuality
SIO_000300: 5.981e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

GenotypeDepth
all individuals: 1769
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20760
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1751
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17139
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 9
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3709
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2947
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7295
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2675
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4318
bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499250374812594e-5
allele num: 66700
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10396
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16500
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.77e0

MQRankSum
type: SiteQuality
SIO_000300: -2.07e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.6e-2

QD
type: SiteQuality
SIO_000300: 1.535e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -2.6e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.15e-1

MQ
type: SiteQuality
SIO_000300: 5.907e1

DP
type: SiteQuality
SIO_000300: 2.551103e6

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17139
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4314
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20620
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2947
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 144
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2670
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7284
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1751
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3707
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10392
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500060002400096e-5
allele num: 66664
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16492
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.982e1

VQSLOD
type: SiteQuality
SIO_000300: 8.86e-1

DP
type: SiteQuality
SIO_000300: 2.549477e6

QD
type: SiteQuality
SIO_000300: 1.239e1

BaseQRankSum
type: SiteQuality
SIO_000300: 9.45e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.8e-1

FS
type: SiteQuality
SIO_000300: 1.186e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.79e-1

MQRankSum
type: SiteQuality
SIO_000300: 8.88e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

GenotypeQuality
all individuals: 1751
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17139
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 20494
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2668
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3707
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4311
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7272
bin: 6.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10390
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16492
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.646031471554557e-5
allele num: 11566
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66638
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.184e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.099999999999999e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 3.78e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.43e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.66e0

MQ
type: SiteQuality
SIO_000300: 6.045e1

FS
type: SiteQuality
SIO_000300: 3.074e0

MQRankSum
type: SiteQuality
SIO_000300: 5.71e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

DP
type: SiteQuality
SIO_000300: 2.547906e6

GenotypeQuality
all individuals: 9
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 378
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17136
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1751
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 260
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 855
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 201
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19169
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7110
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2945
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4288
bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.070171178827243e-5
allele num: 16474
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8592
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10372
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.82e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.9e-2

QD
type: SiteQuality
SIO_000300: 1.61e1

MQRankSum
type: SiteQuality
SIO_000300: -7.28e-1

DP
type: SiteQuality
SIO_000300: 2.532384e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.41e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.8e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.169e0

GenotypeQuality
all individuals: 1272
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1098
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 172
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17131
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 303
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 83
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 304
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1749
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2559
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16665
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3685
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6591
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 663
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2941
bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16462
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10348
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11544
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8540
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.505751972535084e-5
allele num: 66412
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -4.801e0

FS
type: SiteQuality
SIO_000300: 5.019e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.5e-2

QD
type: SiteQuality
SIO_000300: 9.3e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.876e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.8e-3

MQ
type: SiteQuality
SIO_000300: 4.617e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.33e0

DP
type: SiteQuality
SIO_000300: 2.502996e6

MQRankSum
type: SiteQuality
SIO_000300: -2.638e0

GenotypeQuality
all individuals: 16369
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3674
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17127
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2539
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1326
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 404
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1230
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 414
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 97
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1746
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 113
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2940
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4214
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6500
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 139
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 723
bin: 2.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8534
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10344
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66378
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.664009703690868e-5
allele num: 11542
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16462
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 6.38e-1

DP
type: SiteQuality
SIO_000300: 2.496959e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.45e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -3.62e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.061e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.86e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.2e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.103e1