1-149902690-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 149902690
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 149902690
    reference: chr 1
allele count: 4
allele frequency: 3.51376517507335e-5
allele num: 113838
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000492824
  gene symbol: MTMR11
  hgvsc: ENST00000492824.1:n.1634C>T
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000495054
  gene symbol: MTMR11
  hgvsc: ENST00000495054.1:n.501C>T
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000391668
  ensembl transcript: ENST00000439741
  gene symbol: MTMR11
  hgvsc: ENST00000439741.2:c.1458C>T
  hgvsp: ENST00000439741.2:c.1458C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000490310
  gene symbol: MTMR11
  hgvsc: ENST00000490310.1:n.590C>T
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000482343
  gene symbol: MTMR11
  hgvsc: ENST00000482343.1:n.1038C>T
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000383948
  ensembl transcript: ENST00000406732
  gene symbol: MTMR11
  hgvsc: ENST00000406732.3:c.*142C>T
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000358136
  ensembl transcript: ENST00000369140
  gene symbol: MTMR11
  hgvsc: ENST00000369140.3:c.1242C>T
  hgvsp: ENST00000369140.3:c.1242C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000466496
  gene symbol: MTMR11
  hgvsc: ENST00000466496.1:n.778C>T
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000482025
  gene symbol: MTMR11
  hgvsc: ENST00000482025.1:n.1684C>T
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000354941
  ensembl transcript: ENST00000361405
  gene symbol: MTMR11
  hgvsc: ENST00000361405.6:c.*32C>T
  variant of: http://identifiers.org/hgnc/24307
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3455
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27213
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4363
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 722
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 514
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1513
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21297
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 358
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 185
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Ser486Ser
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: African
population: European (Finnish)
population: Latino
population: Other
reference allele: G
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum

1-149902693-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 149902693
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 149902693
    reference: chr 1
allele count: 2
allele frequency: 1.749658816530776e-5
allele num: 114308
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000492824
  gene symbol: MTMR11
  hgvsc: ENST00000492824.1:n.1631G>C
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000383948
  ensembl transcript: ENST00000406732
  gene symbol: MTMR11
  hgvsc: ENST00000406732.3:c.*139G>C
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000490310
  gene symbol: MTMR11
  hgvsc: ENST00000490310.1:n.587G>C
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000391668
  ensembl transcript: ENST00000439741
  gene symbol: MTMR11
  hgvsc: ENST00000439741.2:c.1455G>C
  hgvsp: ENSP00000391668.2:p.Gln485His
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000358136
  ensembl transcript: ENST00000369140
  gene symbol: MTMR11
  hgvsc: ENST00000369140.3:c.1239G>C
  hgvsp: ENSP00000358136.3:p.Gln413His
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000466496
  gene symbol: MTMR11
  hgvsc: ENST00000466496.1:n.775G>C
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000482343
  gene symbol: MTMR11
  hgvsc: ENST00000482343.1:n.1035G>C
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000495054
  gene symbol: MTMR11
  hgvsc: ENST00000495054.1:n.498G>C
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000354941
  ensembl transcript: ENST00000361405
  gene symbol: MTMR11
  hgvsc: ENST00000361405.6:c.*29G>C
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000482025
  gene symbol: MTMR11
  hgvsc: ENST00000482025.1:n.1681G>C
  variant of: http://identifiers.org/hgnc/24307
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 713
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4352
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27428
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1437
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3260
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21410
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1047
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 5960
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Gln485His
num of homozygotes: 0
population: South Asian
population: Other
population: East Asian
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
reference allele: C
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD

1-149902693-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 149902693
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 149902693
    reference: chr 1
allele count: 3
allele frequency: 2.624488224796165e-5
allele num: 114308
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000490310
  gene symbol: MTMR11
  hgvsc: ENST00000490310.1:n.587G>A
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000358136
  ensembl transcript: ENST00000369140
  gene symbol: MTMR11
  hgvsc: ENST00000369140.3:c.1239G>A
  hgvsp: ENST00000369140.3:c.1239G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000495054
  gene symbol: MTMR11
  hgvsc: ENST00000495054.1:n.498G>A
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000391668
  ensembl transcript: ENST00000439741
  gene symbol: MTMR11
  hgvsc: ENST00000439741.2:c.1455G>A
  hgvsp: ENST00000439741.2:c.1455G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000482343
  gene symbol: MTMR11
  hgvsc: ENST00000482343.1:n.1035G>A
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000466496
  gene symbol: MTMR11
  hgvsc: ENST00000466496.1:n.775G>A
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000354941
  ensembl transcript: ENST00000361405
  gene symbol: MTMR11
  hgvsc: ENST00000361405.6:c.*29G>A
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000383948
  ensembl transcript: ENST00000406732
  gene symbol: MTMR11
  hgvsc: ENST00000406732.3:c.*139G>A
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000482025
  gene symbol: MTMR11
  hgvsc: ENST00000482025.1:n.1681G>A
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000492824
  gene symbol: MTMR11
  hgvsc: ENST00000492824.1:n.1631G>A
  variant of: http://identifiers.org/hgnc/24307
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1437
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3260
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 713
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21410
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27428
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4352
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1060
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 194
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 127
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Gln485Gln
num of homozygotes: 1
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Latino
population: South Asian
population: Other
reference allele: C
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum

1-149902701-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 149902701
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 149902701
    reference: chr 1
allele count: 1
allele frequency: 8.672124323574303e-6
allele num: 115312
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000358136
  ensembl transcript: ENST00000369140
  gene symbol: MTMR11
  hgvsc: ENST00000369140.3:c.1231G>A
  hgvsp: ENSP00000358136.3:p.Gly411Arg
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000482343
  gene symbol: MTMR11
  hgvsc: ENST00000482343.1:n.1027G>A
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000466496
  gene symbol: MTMR11
  hgvsc: ENST00000466496.1:n.767G>A
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000490310
  gene symbol: MTMR11
  hgvsc: ENST00000490310.1:n.579G>A
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000354941
  ensembl transcript: ENST00000361405
  gene symbol: MTMR11
  hgvsc: ENST00000361405.6:c.*21G>A
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000383948
  ensembl transcript: ENST00000406732
  gene symbol: MTMR11
  hgvsc: ENST00000406732.3:c.*131G>A
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000482025
  gene symbol: MTMR11
  hgvsc: ENST00000482025.1:n.1673G>A
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000391668
  ensembl transcript: ENST00000439741
  gene symbol: MTMR11
  hgvsc: ENST00000439741.2:c.1447G>A
  hgvsp: ENSP00000391668.2:p.Gly483Arg
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000495054
  gene symbol: MTMR11
  hgvsc: ENST00000495054.1:n.490G>A
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000492824
  gene symbol: MTMR11
  hgvsc: ENST00000492824.1:n.1623G>A
  variant of: http://identifiers.org/hgnc/24307
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1267
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2792
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21635
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4381
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27815
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 707
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 150
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 437
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 147
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Gly483Arg
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: South Asian
population: East Asian
population: Other
population: European (Finnish)
population: African
reference allele: C
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP

1-149902702-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 149902702
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 149902702
    reference: chr 1
allele count: 4
allele frequency: 3.460028026227013e-5
allele num: 115606
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000358136
  ensembl transcript: ENST00000369140
  gene symbol: MTMR11
  hgvsc: ENST00000369140.3:c.1230C>T
  hgvsp: ENST00000369140.3:c.1230C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000490310
  gene symbol: MTMR11
  hgvsc: ENST00000490310.1:n.578C>T
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000354941
  ensembl transcript: ENST00000361405
  gene symbol: MTMR11
  hgvsc: ENST00000361405.6:c.*20C>T
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000391668
  ensembl transcript: ENST00000439741
  gene symbol: MTMR11
  hgvsc: ENST00000439741.2:c.1446C>T
  hgvsp: ENST00000439741.2:c.1446C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000495054
  gene symbol: MTMR11
  hgvsc: ENST00000495054.1:n.489C>T
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000466496
  gene symbol: MTMR11
  hgvsc: ENST00000466496.1:n.766C>T
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000482025
  gene symbol: MTMR11
  hgvsc: ENST00000482025.1:n.1672C>T
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000492824
  gene symbol: MTMR11
  hgvsc: ENST00000492824.1:n.1622C>T
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000383948
  ensembl transcript: ENST00000406732
  gene symbol: MTMR11
  hgvsc: ENST00000406732.3:c.*130C>T
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000482343
  gene symbol: MTMR11
  hgvsc: ENST00000482343.1:n.1026C>T
  variant of: http://identifiers.org/hgnc/24307
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 714
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1235
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 557
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2695
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4392
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 27904
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21666
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 184
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 152
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45069
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Arg482Arg
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: South Asian
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: DP

1-149902703-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 149902703
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 149902703
    reference: chr 1
allele count: 6
allele frequency: 5.185377236193933e-5
allele num: 115710
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000354941
  ensembl transcript: ENST00000361405
  gene symbol: MTMR11
  hgvsc: ENST00000361405.6:c.*19G>A
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000466496
  gene symbol: MTMR11
  hgvsc: ENST00000466496.1:n.765G>A
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000383948
  ensembl transcript: ENST00000406732
  gene symbol: MTMR11
  hgvsc: ENST00000406732.3:c.*129G>A
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000391668
  ensembl transcript: ENST00000439741
  gene symbol: MTMR11
  hgvsc: ENST00000439741.2:c.1445G>A
  hgvsp: ENSP00000391668.2:p.Arg482His
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000490310
  gene symbol: MTMR11
  hgvsc: ENST00000490310.1:n.577G>A
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000492824
  gene symbol: MTMR11
  hgvsc: ENST00000492824.1:n.1621G>A
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000495054
  gene symbol: MTMR11
  hgvsc: ENST00000495054.1:n.488G>A
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000358136
  ensembl transcript: ENST00000369140
  gene symbol: MTMR11
  hgvsc: ENST00000369140.3:c.1229G>A
  hgvsp: ENSP00000358136.3:p.Arg410His
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000482343
  gene symbol: MTMR11
  hgvsc: ENST00000482343.1:n.1025G>A
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000482025
  gene symbol: MTMR11
  hgvsc: ENST00000482025.1:n.1671G>A
  variant of: http://identifiers.org/hgnc/24307
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 27922
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 720
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21733
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2603
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4411
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 555
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1210
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 307
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45166
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Arg482His
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: Latino
population: African
population: South Asian
population: East Asian
population: European (Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP

http://identifiers.org/exac.variant/1-149902708-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 149902708
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 149902708
    reference: chr 1
allele count: 1
allele frequency: 8.550077805708033e-6
allele num: 116958
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000383948
  ensembl transcript: ENST00000406732
  gene symbol: MTMR11
  hgvsc: ENST00000406732.3:c.*124G>T
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000482343
  gene symbol: MTMR11
  hgvsc: ENST00000482343.1:n.1020G>T
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000482025
  gene symbol: MTMR11
  hgvsc: ENST00000482025.1:n.1666G>T
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000358136
  ensembl transcript: ENST00000369140
  gene symbol: MTMR11
  hgvsc: ENST00000369140.3:c.1224G>T
  hgvsp: ENSP00000358136.3:p.Trp408Cys
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000492824
  gene symbol: MTMR11
  hgvsc: ENST00000492824.1:n.1616G>T
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000466496
  gene symbol: MTMR11
  hgvsc: ENST00000466496.1:n.760G>T
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000354941
  ensembl transcript: ENST00000361405
  gene symbol: MTMR11
  hgvsc: ENST00000361405.6:c.*14G>T
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000391668
  ensembl transcript: ENST00000439741
  gene symbol: MTMR11
  hgvsc: ENST00000439741.2:c.1440G>T
  hgvsp: ENSP00000391668.2:p.Trp480Cys
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000495054
  gene symbol: MTMR11
  hgvsc: ENST00000495054.1:n.483G>T
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000490310
  gene symbol: MTMR11
  hgvsc: ENST00000490310.1:n.572G>T
  variant of: http://identifiers.org/hgnc/24307
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 21982
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1031
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 707
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4392
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2063
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28547
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6064
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 136
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1424
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Trp480Cys
num of homozygotes: 0
population: African
population: East Asian
population: South Asian
population: European (Finnish)
population: Other
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: DP
site quality: ClippingRankSum

1-149902710-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 149902710
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 149902710
    reference: chr 1
allele count: 5
allele frequency: 4.260976274884101e-5
allele num: 117344
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000492824
  gene symbol: MTMR11
  hgvsc: ENST00000492824.1:n.1614T>A
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000490310
  gene symbol: MTMR11
  hgvsc: ENST00000490310.1:n.570T>A
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000482025
  gene symbol: MTMR11
  hgvsc: ENST00000482025.1:n.1664T>A
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000354941
  ensembl transcript: ENST00000361405
  gene symbol: MTMR11
  hgvsc: ENST00000361405.6:c.*12T>A
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000358136
  ensembl transcript: ENST00000369140
  gene symbol: MTMR11
  hgvsc: ENST00000369140.3:c.1222T>A
  hgvsp: ENSP00000358136.3:p.Trp408Arg
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000383948
  ensembl transcript: ENST00000406732
  gene symbol: MTMR11
  hgvsc: ENST00000406732.3:c.*122T>A
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000482343
  gene symbol: MTMR11
  hgvsc: ENST00000482343.1:n.1018T>A
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000495054
  gene symbol: MTMR11
  hgvsc: ENST00000495054.1:n.481T>A
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000466496
  gene symbol: MTMR11
  hgvsc: ENST00000466496.1:n.758T>A
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000391668
  ensembl transcript: ENST00000439741
  gene symbol: MTMR11
  hgvsc: ENST00000439741.2:c.1438T>A
  hgvsp: ENSP00000391668.2:p.Trp480Arg
  variant of: http://identifiers.org/hgnc/24307
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 704
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 934
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22056
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4421
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 473
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28740
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1887
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1050
  bin: 9.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 356
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6063
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Trp480Arg
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: A
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP

1-149902711-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 149902711
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 149902711
    reference: chr 1
allele count: 1
allele frequency: 8.510203734277399e-6
allele num: 117506
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000391668
  ensembl transcript: ENST00000439741
  gene symbol: MTMR11
  hgvsc: ENST00000439741.2:c.1437C>T
  hgvsp: ENST00000439741.2:c.1437C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000495054
  gene symbol: MTMR11
  hgvsc: ENST00000495054.1:n.480C>T
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000492824
  gene symbol: MTMR11
  hgvsc: ENST00000492824.1:n.1613C>T
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000482343
  gene symbol: MTMR11
  hgvsc: ENST00000482343.1:n.1017C>T
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000482025
  gene symbol: MTMR11
  hgvsc: ENST00000482025.1:n.1663C>T
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000358136
  ensembl transcript: ENST00000369140
  gene symbol: MTMR11
  hgvsc: ENST00000369140.3:c.1221C>T
  hgvsp: ENST00000369140.3:c.1221C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000466496
  gene symbol: MTMR11
  hgvsc: ENST00000466496.1:n.757C>T
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000383948
  ensembl transcript: ENST00000406732
  gene symbol: MTMR11
  hgvsc: ENST00000406732.3:c.*121C>T
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000354941
  ensembl transcript: ENST00000361405
  gene symbol: MTMR11
  hgvsc: ENST00000361405.6:c.*11C>T
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000490310
  gene symbol: MTMR11
  hgvsc: ENST00000490310.1:n.569C>T
  variant of: http://identifiers.org/hgnc/24307
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 473
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4428
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 707
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28813
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1813
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 901
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22077
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 182
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 184
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 250
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Pro479Pro
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: East Asian
population: African
reference allele: G
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum

1-149902712-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 149902712
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 149902712
    reference: chr 1
allele count: 1
allele frequency: 8.498487269266071e-6
allele num: 117668
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000358136
  ensembl transcript: ENST00000369140
  gene symbol: MTMR11
  hgvsc: ENST00000369140.3:c.1220C>G
  hgvsp: ENSP00000358136.3:p.Pro407Arg
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000466496
  gene symbol: MTMR11
  hgvsc: ENST00000466496.1:n.756C>G
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000495054
  gene symbol: MTMR11
  hgvsc: ENST00000495054.1:n.479C>G
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000383948
  ensembl transcript: ENST00000406732
  gene symbol: MTMR11
  hgvsc: ENST00000406732.3:c.*120C>G
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000482343
  gene symbol: MTMR11
  hgvsc: ENST00000482343.1:n.1016C>G
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000482025
  gene symbol: MTMR11
  hgvsc: ENST00000482025.1:n.1662C>G
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000490310
  gene symbol: MTMR11
  hgvsc: ENST00000490310.1:n.568C>G
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000492824
  gene symbol: MTMR11
  hgvsc: ENST00000492824.1:n.1612C>G
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000354941
  ensembl transcript: ENST00000361405
  gene symbol: MTMR11
  hgvsc: ENST00000361405.6:c.*10C>G
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000391668
  ensembl transcript: ENST00000439741
  gene symbol: MTMR11
  hgvsc: ENST00000439741.2:c.1436C>G
  hgvsp: ENSP00000391668.2:p.Pro479Arg
  variant of: http://identifiers.org/hgnc/24307
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 878
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1750
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22128
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4429
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28890
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 706
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1975
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Pro479Arg
num of homozygotes: 0
population: African
population: Other
population: East Asian
population: South Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff

1-149902712-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 149902712
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 149902712
    reference: chr 1
allele count: 2
allele frequency: 1.699697453853214e-5
allele num: 117668
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000490310
  gene symbol: MTMR11
  hgvsc: ENST00000490310.1:n.568C>A
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000495054
  gene symbol: MTMR11
  hgvsc: ENST00000495054.1:n.479C>A
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000391668
  ensembl transcript: ENST00000439741
  gene symbol: MTMR11
  hgvsc: ENST00000439741.2:c.1436C>A
  hgvsp: ENSP00000391668.2:p.Pro479His
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000358136
  ensembl transcript: ENST00000369140
  gene symbol: MTMR11
  hgvsc: ENST00000369140.3:c.1220C>A
  hgvsp: ENSP00000358136.3:p.Pro407His
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000383948
  ensembl transcript: ENST00000406732
  gene symbol: MTMR11
  hgvsc: ENST00000406732.3:c.*120C>A
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000482025
  gene symbol: MTMR11
  hgvsc: ENST00000482025.1:n.1662C>A
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000492824
  gene symbol: MTMR11
  hgvsc: ENST00000492824.1:n.1612C>A
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000482343
  gene symbol: MTMR11
  hgvsc: ENST00000482343.1:n.1016C>A
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000354941
  ensembl transcript: ENST00000361405
  gene symbol: MTMR11
  hgvsc: ENST00000361405.6:c.*10C>A
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000466496
  gene symbol: MTMR11
  hgvsc: ENST00000466496.1:n.756C>A
  variant of: http://identifiers.org/hgnc/24307
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22128
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 706
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28890
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1750
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4429
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 878
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1432
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1085
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Pro479His
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: East Asian
population: Latino
population: European (Finnish)
population: African
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: DP

1-149902712-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 149902712
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 149902712
    reference: chr 1
allele count: 1
allele frequency: 8.498487269266071e-6
allele num: 117668
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000391668
  ensembl transcript: ENST00000439741
  gene symbol: MTMR11
  hgvsc: ENST00000439741.2:c.1436C>T
  hgvsp: ENSP00000391668.2:p.Pro479Leu
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000383948
  ensembl transcript: ENST00000406732
  gene symbol: MTMR11
  hgvsc: ENST00000406732.3:c.*120C>T
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000482343
  gene symbol: MTMR11
  hgvsc: ENST00000482343.1:n.1016C>T
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000358136
  ensembl transcript: ENST00000369140
  gene symbol: MTMR11
  hgvsc: ENST00000369140.3:c.1220C>T
  hgvsp: ENSP00000358136.3:p.Pro407Leu
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000354941
  ensembl transcript: ENST00000361405
  gene symbol: MTMR11
  hgvsc: ENST00000361405.6:c.*10C>T
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000495054
  gene symbol: MTMR11
  hgvsc: ENST00000495054.1:n.479C>T
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000466496
  gene symbol: MTMR11
  hgvsc: ENST00000466496.1:n.756C>T
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000490310
  gene symbol: MTMR11
  hgvsc: ENST00000490310.1:n.568C>T
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000492824
  gene symbol: MTMR11
  hgvsc: ENST00000492824.1:n.1612C>T
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000482025
  gene symbol: MTMR11
  hgvsc: ENST00000482025.1:n.1662C>T
  variant of: http://identifiers.org/hgnc/24307
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 878
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22128
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 706
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1750
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28890
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4429
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 184
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1975
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Pro479Leu
num of homozygotes: 0
population: European (Finnish)
population: African
population: Other
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Latino
reference allele: G
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: DP

1-149902714-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 149902714
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 149902714
    reference: chr 1
allele count: 5
allele frequency: 4.239731370620357e-5
allele num: 117932
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000466496
  gene symbol: MTMR11
  hgvsc: ENST00000466496.1:n.754C>A
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000391668
  ensembl transcript: ENST00000439741
  gene symbol: MTMR11
  hgvsc: ENST00000439741.2:c.1434C>A
  hgvsp: ENST00000439741.2:c.1434C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000490310
  gene symbol: MTMR11
  hgvsc: ENST00000490310.1:n.566C>A
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000482025
  gene symbol: MTMR11
  hgvsc: ENST00000482025.1:n.1660C>A
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000358136
  ensembl transcript: ENST00000369140
  gene symbol: MTMR11
  hgvsc: ENST00000369140.3:c.1218C>A
  hgvsp: ENST00000369140.3:c.1218C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000383948
  ensembl transcript: ENST00000406732
  gene symbol: MTMR11
  hgvsc: ENST00000406732.3:c.*118C>A
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000354941
  ensembl transcript: ENST00000361405
  gene symbol: MTMR11
  hgvsc: ENST00000361405.6:c.*8C>A
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000495054
  gene symbol: MTMR11
  hgvsc: ENST00000495054.1:n.477C>A
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000492824
  gene symbol: MTMR11
  hgvsc: ENST00000492824.1:n.1610C>A
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000482343
  gene symbol: MTMR11
  hgvsc: ENST00000482343.1:n.1014C>A
  variant of: http://identifiers.org/hgnc/24307
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 823
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28974
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1653
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22223
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4415
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 705
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1436
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 162
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 194
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Thr478Thr
num of homozygotes: 0
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: East Asian
population: South Asian
population: Other
reference allele: G
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum

1-149902715-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 149902715
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 149902715
    reference: chr 1
allele count: 2
allele frequency: 1.694427029499975e-5
allele num: 118034
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000391668
  ensembl transcript: ENST00000439741
  gene symbol: MTMR11
  hgvsc: ENST00000439741.2:c.1433C>A
  hgvsp: ENSP00000391668.2:p.Thr478Asn
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000482025
  gene symbol: MTMR11
  hgvsc: ENST00000482025.1:n.1659C>A
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000358136
  ensembl transcript: ENST00000369140
  gene symbol: MTMR11
  hgvsc: ENST00000369140.3:c.1217C>A
  hgvsp: ENSP00000358136.3:p.Thr406Asn
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000492824
  gene symbol: MTMR11
  hgvsc: ENST00000492824.1:n.1609C>A
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000354941
  ensembl transcript: ENST00000361405
  gene symbol: MTMR11
  hgvsc: ENST00000361405.6:c.*7C>A
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000383948
  ensembl transcript: ENST00000406732
  gene symbol: MTMR11
  hgvsc: ENST00000406732.3:c.*117C>A
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000466496
  gene symbol: MTMR11
  hgvsc: ENST00000466496.1:n.753C>A
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000495054
  gene symbol: MTMR11
  hgvsc: ENST00000495054.1:n.476C>A
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000490310
  gene symbol: MTMR11
  hgvsc: ENST00000490310.1:n.565C>A
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000482343
  gene symbol: MTMR11
  hgvsc: ENST00000482343.1:n.1013C>A
  variant of: http://identifiers.org/hgnc/24307
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4429
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1607
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 812
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 707
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28999
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22240
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 309
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 175
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Thr478Asn
num of homozygotes: 0
population: East Asian
population: Latino
population: South Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: DP
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ

1-149902718-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 149902718
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 149902718
    reference: chr 1
allele count: 1
allele frequency: 8.44694474008751e-6
allele num: 118386
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000383948
  ensembl transcript: ENST00000406732
  gene symbol: MTMR11
  hgvsc: ENST00000406732.3:c.*114A>G
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000358136
  ensembl transcript: ENST00000369140
  gene symbol: MTMR11
  hgvsc: ENST00000369140.3:c.1214A>G
  hgvsp: ENSP00000358136.3:p.Asn405Ser
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000482025
  gene symbol: MTMR11
  hgvsc: ENST00000482025.1:n.1656A>G
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000482343
  gene symbol: MTMR11
  hgvsc: ENST00000482343.1:n.1010A>G
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000490310
  gene symbol: MTMR11
  hgvsc: ENST00000490310.1:n.562A>G
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000391668
  ensembl transcript: ENST00000439741
  gene symbol: MTMR11
  hgvsc: ENST00000439741.2:c.1430A>G
  hgvsp: ENSP00000391668.2:p.Asn477Ser
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000354941
  ensembl transcript: ENST00000361405
  gene symbol: MTMR11
  hgvsc: ENST00000361405.6:c.*4A>G
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000466496
  gene symbol: MTMR11
  hgvsc: ENST00000466496.1:n.750A>G
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000492824
  gene symbol: MTMR11
  hgvsc: ENST00000492824.1:n.1606A>G
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000495054
  gene symbol: MTMR11
  hgvsc: ENST00000495054.1:n.473A>G
  variant of: http://identifiers.org/hgnc/24307
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4415
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29169
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22359
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 700
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1443
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 758
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 184
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Asn477Ser
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: African
population: South Asian
population: Latino
population: Other
reference allele: T
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum

1-149902721-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 149902721
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 149902721
    reference: chr 1
allele count: 1
allele frequency: 8.429570934839416e-6
allele num: 118630
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000482343
  gene symbol: MTMR11
  hgvsc: ENST00000482343.1:n.1007G>A
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000354941
  ensembl transcript: ENST00000361405
  gene symbol: MTMR11
  hgvsc: ENST00000361405.6:c.*1G>A
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000391668
  ensembl transcript: ENST00000439741
  gene symbol: MTMR11
  hgvsc: ENST00000439741.2:c.1427G>A
  hgvsp: ENSP00000391668.2:p.Arg476Lys
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000495054
  gene symbol: MTMR11
  hgvsc: ENST00000495054.1:n.470G>A
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000466496
  gene symbol: MTMR11
  hgvsc: ENST00000466496.1:n.747G>A
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000492824
  gene symbol: MTMR11
  hgvsc: ENST00000492824.1:n.1603G>A
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000383948
  ensembl transcript: ENST00000406732
  gene symbol: MTMR11
  hgvsc: ENST00000406732.3:c.*111G>A
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000358136
  ensembl transcript: ENST00000369140
  gene symbol: MTMR11
  hgvsc: ENST00000369140.3:c.1211G>A
  hgvsp: ENSP00000358136.3:p.Arg404Lys
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000482025
  gene symbol: MTMR11
  hgvsc: ENST00000482025.1:n.1653G>A
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000490310
  gene symbol: MTMR11
  hgvsc: ENST00000490310.1:n.559G>A
  variant of: http://identifiers.org/hgnc/24307
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22430
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4437
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 723
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1303
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29264
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 702
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Arg476Lys
num of homozygotes: 0
population: Other
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: C
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum

1-149902739-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 149902739
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 149902739
    reference: chr 1
allele count: 2
allele frequency: 1.670285618840822e-5
allele num: 119740
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000354941
  ensembl transcript: ENST00000361405
  gene symbol: MTMR11
  hgvsc: ENST00000361405.6:c.802A>C
  hgvsp: ENSP00000354941.6:p.Thr268Pro
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000482025
  gene symbol: MTMR11
  hgvsc: ENST00000482025.1:n.1635A>C
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000383948
  ensembl transcript: ENST00000406732
  gene symbol: MTMR11
  hgvsc: ENST00000406732.3:c.*93A>C
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000358136
  ensembl transcript: ENST00000369140
  gene symbol: MTMR11
  hgvsc: ENST00000369140.3:c.1193A>C
  hgvsp: ENSP00000358136.3:p.Asp398Ala
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000492824
  gene symbol: MTMR11
  hgvsc: ENST00000492824.1:n.1585A>C
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000466496
  gene symbol: MTMR11
  hgvsc: ENST00000466496.1:n.729A>C
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000391668
  ensembl transcript: ENST00000439741
  gene symbol: MTMR11
  hgvsc: ENST00000439741.2:c.1409A>C
  hgvsp: ENSP00000391668.2:p.Asp470Ala
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000490310
  gene symbol: MTMR11
  hgvsc: ENST00000490310.1:n.541A>C
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000495054
  gene symbol: MTMR11
  hgvsc: ENST00000495054.1:n.452A>C
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000482343
  gene symbol: MTMR11
  hgvsc: ENST00000482343.1:n.989A>C
  variant of: http://identifiers.org/hgnc/24307
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 597
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 796
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4464
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 701
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29430
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22856
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 179
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47813
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Asp470Ala
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: European (Non-Finnish)
population: African
population: Other
population: South Asian
reference allele: T
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum

1-149902742-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 149902742
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 149902742
    reference: chr 1
allele count: 1
allele frequency: 8.34125752798492e-6
allele num: 119886
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000482343
  gene symbol: MTMR11
  hgvsc: ENST00000482343.1:n.986C>T
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000358136
  ensembl transcript: ENST00000369140
  gene symbol: MTMR11
  hgvsc: ENST00000369140.3:c.1190C>T
  hgvsp: ENSP00000358136.3:p.Pro397Leu
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000391668
  ensembl transcript: ENST00000439741
  gene symbol: MTMR11
  hgvsc: ENST00000439741.2:c.1406C>T
  hgvsp: ENSP00000391668.2:p.Pro469Leu
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000492824
  gene symbol: MTMR11
  hgvsc: ENST00000492824.1:n.1582C>T
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000383948
  ensembl transcript: ENST00000406732
  gene symbol: MTMR11
  hgvsc: ENST00000406732.3:c.*90C>T
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000354941
  ensembl transcript: ENST00000361405
  gene symbol: MTMR11
  hgvsc: ENST00000361405.6:c.799C>T
  hgvsp: ENST00000361405.6:c.799C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000495054
  gene symbol: MTMR11
  hgvsc: ENST00000495054.1:n.449C>T
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000466496
  gene symbol: MTMR11
  hgvsc: ENST00000466496.1:n.726C>T
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000482025
  gene symbol: MTMR11
  hgvsc: ENST00000482025.1:n.1632C>T
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000490310
  gene symbol: MTMR11
  hgvsc: ENST00000490310.1:n.538C>T
  variant of: http://identifiers.org/hgnc/24307
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 729
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22923
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 416
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29450
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4474
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 702
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1425
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 192
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Pro469Leu
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: South Asian
population: Other
population: European (Non-Finnish)
population: African
population: Latino
reference allele: G
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD

http://identifiers.org/exac.variant/1-149902747-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 149902747
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 149902747
    reference: chr 1
allele count: 2
allele frequency: 1.667750704624673e-5
allele num: 119922
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000358136
  ensembl transcript: ENST00000369140
  gene symbol: MTMR11
  hgvsc: ENST00000369140.3:c.1185G>T
  hgvsp: ENSP00000358136.3:p.Arg395Ser
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000482343
  gene symbol: MTMR11
  hgvsc: ENST00000482343.1:n.981G>T
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000391668
  ensembl transcript: ENST00000439741
  gene symbol: MTMR11
  hgvsc: ENST00000439741.2:c.1401G>T
  hgvsp: ENSP00000391668.2:p.Arg467Ser
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000383948
  ensembl transcript: ENST00000406732
  gene symbol: MTMR11
  hgvsc: ENST00000406732.3:c.*85G>T
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000466496
  gene symbol: MTMR11
  hgvsc: ENST00000466496.1:n.721G>T
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000490310
  gene symbol: MTMR11
  hgvsc: ENST00000490310.1:n.533G>T
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000482025
  gene symbol: MTMR11
  hgvsc: ENST00000482025.1:n.1627G>T
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000492824
  gene symbol: MTMR11
  hgvsc: ENST00000492824.1:n.1577G>T
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000495054
  gene symbol: MTMR11
  hgvsc: ENST00000495054.1:n.444G>T
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000354941
  ensembl transcript: ENST00000361405
  gene symbol: MTMR11
  hgvsc: ENST00000361405.6:c.794G>T
  hgvsp: ENSP00000354941.6:p.Gly265Val
  variant of: http://identifiers.org/hgnc/24307
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4480
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29323
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 712
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22970
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 699
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 635
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1038
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 47991
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1423
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Arg467Ser
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD

1-149902753-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 149902753
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 149902753
    reference: chr 1
allele count: 4
allele frequency: 3.337004037774885e-5
allele num: 119868
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000466496
  gene symbol: MTMR11
  hgvsc: ENST00000466496.1:n.715T>C
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000490310
  gene symbol: MTMR11
  hgvsc: ENST00000490310.1:n.527T>C
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000358136
  ensembl transcript: ENST00000369140
  gene symbol: MTMR11
  hgvsc: ENST00000369140.3:c.1179T>C
  hgvsp: ENST00000369140.3:c.1179T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000492824
  gene symbol: MTMR11
  hgvsc: ENST00000492824.1:n.1571T>C
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000383948
  ensembl transcript: ENST00000406732
  gene symbol: MTMR11
  hgvsc: ENST00000406732.3:c.*79T>C
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000482343
  gene symbol: MTMR11
  hgvsc: ENST00000482343.1:n.975T>C
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000354941
  ensembl transcript: ENST00000361405
  gene symbol: MTMR11
  hgvsc: ENST00000361405.6:c.788T>C
  hgvsp: ENSP00000354941.6:p.Val263Ala
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000482025
  gene symbol: MTMR11
  hgvsc: ENST00000482025.1:n.1621T>C
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000495054
  gene symbol: MTMR11
  hgvsc: ENST00000495054.1:n.438T>C
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000391668
  ensembl transcript: ENST00000439741
  gene symbol: MTMR11
  hgvsc: ENST00000439741.2:c.1395T>C
  hgvsp: ENST00000439741.2:c.1395T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/24307
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 749
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4469
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 776
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 637
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 700
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23036
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28932
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1065
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Val263Ala
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Finnish)
population: Other
population: African
population: Latino
population: European (Non-Finnish)
reference allele: A
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: BaseQRankSum

1-149902754-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 149902754
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 149902754
    reference: chr 1
allele count: 1
allele frequency: 8.341814177747376e-6
allele num: 119878
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000495054
  gene symbol: MTMR11
  hgvsc: ENST00000495054.1:n.437G>A
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000466496
  gene symbol: MTMR11
  hgvsc: ENST00000466496.1:n.714G>A
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000383948
  ensembl transcript: ENST00000406732
  gene symbol: MTMR11
  hgvsc: ENST00000406732.3:c.*78G>A
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000482025
  gene symbol: MTMR11
  hgvsc: ENST00000482025.1:n.1620G>A
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000354941
  ensembl transcript: ENST00000361405
  gene symbol: MTMR11
  hgvsc: ENST00000361405.6:c.787G>A
  hgvsp: ENSP00000354941.6:p.Val263Met
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000490310
  gene symbol: MTMR11
  hgvsc: ENST00000490310.1:n.526G>A
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000492824
  gene symbol: MTMR11
  hgvsc: ENST00000492824.1:n.1570G>A
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000391668
  ensembl transcript: ENST00000439741
  gene symbol: MTMR11
  hgvsc: ENST00000439741.2:c.1394G>A
  hgvsp: ENSP00000391668.2:p.Ser465Asn
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000358136
  ensembl transcript: ENST00000369140
  gene symbol: MTMR11
  hgvsc: ENST00000369140.3:c.1178G>A
  hgvsp: ENSP00000358136.3:p.Ser393Asn
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000482343
  gene symbol: MTMR11
  hgvsc: ENST00000482343.1:n.974G>A
  variant of: http://identifiers.org/hgnc/24307
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 774
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 631
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 741
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28920
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4486
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23044
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 699
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 444
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1139
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Ser465Asn
num of homozygotes: 0
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: African
population: European (Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum

1-149902759-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 149902759
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 149902759
    reference: chr 1
allele count: 2
allele frequency: 1.67117884956048e-5
allele num: 119676
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000466496
  gene symbol: MTMR11
  hgvsc: ENST00000466496.1:n.709T>C
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000495054
  gene symbol: MTMR11
  hgvsc: ENST00000495054.1:n.432T>C
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000391668
  ensembl transcript: ENST00000439741
  gene symbol: MTMR11
  hgvsc: ENST00000439741.2:c.1389T>C
  hgvsp: ENST00000439741.2:c.1389T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000482025
  gene symbol: MTMR11
  hgvsc: ENST00000482025.1:n.1615T>C
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000482343
  gene symbol: MTMR11
  hgvsc: ENST00000482343.1:n.969T>C
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000492824
  gene symbol: MTMR11
  hgvsc: ENST00000492824.1:n.1565T>C
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000354941
  ensembl transcript: ENST00000361405
  gene symbol: MTMR11
  hgvsc: ENST00000361405.6:c.782T>C
  hgvsp: ENSP00000354941.6:p.Met261Thr
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000358136
  ensembl transcript: ENST00000369140
  gene symbol: MTMR11
  hgvsc: ENST00000369140.3:c.1173T>C
  hgvsp: ENST00000369140.3:c.1173T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000383948
  ensembl transcript: ENST00000406732
  gene symbol: MTMR11
  hgvsc: ENST00000406732.3:c.*73T>C
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000490310
  gene symbol: MTMR11
  hgvsc: ENST00000490310.1:n.521T>C
  variant of: http://identifiers.org/hgnc/24307
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 981
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28402
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23004
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 840
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 914
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4462
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 214
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 343
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 443
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Met261Thr
num of homozygotes: 0
population: Latino
population: Other
population: European (Non-Finnish)
population: African
population: East Asian
population: South Asian
population: European (Finnish)
reference allele: A
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: DP

1-149902760-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 149902760
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 149902760
    reference: chr 1
allele count: 4
allele frequency: 3.342245989304813e-5
allele num: 119680
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000482343
  gene symbol: MTMR11
  hgvsc: ENST00000482343.1:n.968A>C
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000391668
  ensembl transcript: ENST00000439741
  gene symbol: MTMR11
  hgvsc: ENST00000439741.2:c.1388A>C
  hgvsp: ENSP00000391668.2:p.His463Pro
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000383948
  ensembl transcript: ENST00000406732
  gene symbol: MTMR11
  hgvsc: ENST00000406732.3:c.*72A>C
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000482025
  gene symbol: MTMR11
  hgvsc: ENST00000482025.1:n.1614A>C
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000354941
  ensembl transcript: ENST00000361405
  gene symbol: MTMR11
  hgvsc: ENST00000361405.6:c.781A>C
  hgvsp: ENSP00000354941.6:p.Met261Leu
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000358136
  ensembl transcript: ENST00000369140
  gene symbol: MTMR11
  hgvsc: ENST00000369140.3:c.1172A>C
  hgvsp: ENSP00000358136.3:p.His391Pro
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000492824
  gene symbol: MTMR11
  hgvsc: ENST00000492824.1:n.1564A>C
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000490310
  gene symbol: MTMR11
  hgvsc: ENST00000490310.1:n.520A>C
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000466496
  gene symbol: MTMR11
  hgvsc: ENST00000466496.1:n.708A>C
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000495054
  gene symbol: MTMR11
  hgvsc: ENST00000495054.1:n.431A>C
  variant of: http://identifiers.org/hgnc/24307
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4464
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23008
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28405
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 906
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 696
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 982
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 836
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46959
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 441
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 1.75e1
  variant carriers: 0
hgvs: p.His463Pro
num of homozygotes: 0
population: Other
population: East Asian
population: African
population: Latino
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: T
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD

http://identifiers.org/exac.variant/1-149902763-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 149902763
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 149902763
    reference: chr 1
allele count: 1
allele frequency: 8.362462577979963e-6
allele num: 119582
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000383948
  ensembl transcript: ENST00000406732
  gene symbol: MTMR11
  hgvsc: ENST00000406732.3:c.*69T>G
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000466496
  gene symbol: MTMR11
  hgvsc: ENST00000466496.1:n.705T>G
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000482343
  gene symbol: MTMR11
  hgvsc: ENST00000482343.1:n.965T>G
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000492824
  gene symbol: MTMR11
  hgvsc: ENST00000492824.1:n.1561T>G
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000482025
  gene symbol: MTMR11
  hgvsc: ENST00000482025.1:n.1611T>G
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000354941
  ensembl transcript: ENST00000361405
  gene symbol: MTMR11
  hgvsc: ENST00000361405.6:c.778T>G
  hgvsp: ENSP00000354941.6:p.Phe260Val
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000358136
  ensembl transcript: ENST00000369140
  gene symbol: MTMR11
  hgvsc: ENST00000369140.3:c.1169T>G
  hgvsp: ENSP00000358136.3:p.Leu390Arg
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000391668
  ensembl transcript: ENST00000439741
  gene symbol: MTMR11
  hgvsc: ENST00000439741.2:c.1385T>G
  hgvsp: ENSP00000391668.2:p.Leu462Arg
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000490310
  gene symbol: MTMR11
  hgvsc: ENST00000490310.1:n.517T>G
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000495054
  gene symbol: MTMR11
  hgvsc: ENST00000495054.1:n.428T>G
  variant of: http://identifiers.org/hgnc/24307
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 696
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22959
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1089
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1110
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 882
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4435
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28121
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1481
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Leu462Arg
num of homozygotes: 0
population: Other
population: East Asian
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: A
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP

1-149902768-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 149902768
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 149902768
    reference: chr 1
allele count: 2
allele frequency: 1.676080653001022e-5
allele num: 119326
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000495054
  gene symbol: MTMR11
  hgvsc: ENST00000495054.1:n.423T>C
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000354941
  ensembl transcript: ENST00000361405
  gene symbol: MTMR11
  hgvsc: ENST00000361405.6:c.773T>C
  hgvsp: ENSP00000354941.6:p.Leu258Ser
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000391668
  ensembl transcript: ENST00000439741
  gene symbol: MTMR11
  hgvsc: ENST00000439741.2:c.1380T>C
  hgvsp: ENST00000439741.2:c.1380T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000466496
  gene symbol: MTMR11
  hgvsc: ENST00000466496.1:n.700T>C
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000482343
  gene symbol: MTMR11
  hgvsc: ENST00000482343.1:n.960T>C
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000383948
  ensembl transcript: ENST00000406732
  gene symbol: MTMR11
  hgvsc: ENST00000406732.3:c.*64T>C
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000358136
  ensembl transcript: ENST00000369140
  gene symbol: MTMR11
  hgvsc: ENST00000369140.3:c.1164T>C
  hgvsp: ENST00000369140.3:c.1164T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000482025
  gene symbol: MTMR11
  hgvsc: ENST00000482025.1:n.1606T>C
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000492824
  gene symbol: MTMR11
  hgvsc: ENST00000492824.1:n.1556T>C
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000490310
  gene symbol: MTMR11
  hgvsc: ENST00000490310.1:n.512T>C
  variant of: http://identifiers.org/hgnc/24307
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22825
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27708
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4390
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1374
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1003
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1302
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 690
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 434
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 492
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Leu258Ser
num of homozygotes: 0
population: African
population: Latino
population: South Asian
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum

1-149902768-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 149902768
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 149902768
    reference: chr 1
allele count: 1
allele frequency: 8.380403265005112e-6
allele num: 119326
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000492824
  gene symbol: MTMR11
  hgvsc: ENST00000492824.1:n.1556T>A
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000391668
  ensembl transcript: ENST00000439741
  gene symbol: MTMR11
  hgvsc: ENST00000439741.2:c.1380T>A
  hgvsp: ENST00000439741.2:c.1380T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000383948
  ensembl transcript: ENST00000406732
  gene symbol: MTMR11
  hgvsc: ENST00000406732.3:c.*64T>A
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000490310
  gene symbol: MTMR11
  hgvsc: ENST00000490310.1:n.512T>A
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000358136
  ensembl transcript: ENST00000369140
  gene symbol: MTMR11
  hgvsc: ENST00000369140.3:c.1164T>A
  hgvsp: ENST00000369140.3:c.1164T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000466496
  gene symbol: MTMR11
  hgvsc: ENST00000466496.1:n.700T>A
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000354941
  ensembl transcript: ENST00000361405
  gene symbol: MTMR11
  hgvsc: ENST00000361405.6:c.773T>A
  hgvsp: ENSP00000354941.6:p.Leu258Ter
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000482025
  gene symbol: MTMR11
  hgvsc: ENST00000482025.1:n.1606T>A
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000482343
  gene symbol: MTMR11
  hgvsc: ENST00000482343.1:n.960T>A
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000495054
  gene symbol: MTMR11
  hgvsc: ENST00000495054.1:n.423T>A
  variant of: http://identifiers.org/hgnc/24307
canonical: false
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 22825
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4390
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27708
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 690
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1302
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1003
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1374
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1722
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 588
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Leu258Ter
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Latino
population: South Asian
population: East Asian
population: Other
reference allele: A
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: QD

1-149902773-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 149902773
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 149902773
    reference: chr 1
allele count: 1
allele frequency: 8.390528771123156e-6
allele num: 119182
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000495054
  gene symbol: MTMR11
  hgvsc: ENST00000495054.1:n.418C>T
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000354941
  ensembl transcript: ENST00000361405
  gene symbol: MTMR11
  hgvsc: ENST00000361405.6:c.768C>T
  hgvsp: ENST00000361405.6:c.768C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000391668
  ensembl transcript: ENST00000439741
  gene symbol: MTMR11
  hgvsc: ENST00000439741.2:c.1375C>T
  hgvsp: ENSP00000391668.2:p.Leu459Phe
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000492824
  gene symbol: MTMR11
  hgvsc: ENST00000492824.1:n.1551C>T
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000358136
  ensembl transcript: ENST00000369140
  gene symbol: MTMR11
  hgvsc: ENST00000369140.3:c.1159C>T
  hgvsp: ENSP00000358136.3:p.Leu387Phe
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000383948
  ensembl transcript: ENST00000406732
  gene symbol: MTMR11
  hgvsc: ENST00000406732.3:c.*59C>T
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000466496
  gene symbol: MTMR11
  hgvsc: ENST00000466496.1:n.695C>T
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000482025
  gene symbol: MTMR11
  hgvsc: ENST00000482025.1:n.1601C>T
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000490310
  gene symbol: MTMR11
  hgvsc: ENST00000490310.1:n.507C>T
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000482343
  gene symbol: MTMR11
  hgvsc: ENST00000482343.1:n.955C>T
  variant of: http://identifiers.org/hgnc/24307
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22683
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1522
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1412
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27572
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1067
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4343
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 663
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 428
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Leu459Phe
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: South Asian
population: East Asian
population: Latino
population: African
reference allele: G
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ

1-149902774-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 149902774
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 149902774
    reference: chr 1
allele count: 1
allele frequency: 8.403643819960336e-6
allele num: 118996
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000358136
  ensembl transcript: ENST00000369140
  gene symbol: MTMR11
  hgvsc: ENST00000369140.3:c.1158C>T
  hgvsp: ENST00000369140.3:c.1158C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000383948
  ensembl transcript: ENST00000406732
  gene symbol: MTMR11
  hgvsc: ENST00000406732.3:c.*58C>T
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000490310
  gene symbol: MTMR11
  hgvsc: ENST00000490310.1:n.506C>T
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000482025
  gene symbol: MTMR11
  hgvsc: ENST00000482025.1:n.1600C>T
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000482343
  gene symbol: MTMR11
  hgvsc: ENST00000482343.1:n.954C>T
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000492824
  gene symbol: MTMR11
  hgvsc: ENST00000492824.1:n.1550C>T
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000354941
  ensembl transcript: ENST00000361405
  gene symbol: MTMR11
  hgvsc: ENST00000361405.6:c.767C>T
  hgvsp: ENSP00000354941.6:p.Ser256Phe
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000391668
  ensembl transcript: ENST00000439741
  gene symbol: MTMR11
  hgvsc: ENST00000439741.2:c.1374C>T
  hgvsp: ENST00000439741.2:c.1374C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000466496
  gene symbol: MTMR11
  hgvsc: ENST00000466496.1:n.694C>T
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000495054
  gene symbol: MTMR11
  hgvsc: ENST00000495054.1:n.417C>T
  variant of: http://identifiers.org/hgnc/24307
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1663
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1487
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1132
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27307
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4368
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22635
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 695
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 168
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1971
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 718
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Ser256Phe
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: African
population: East Asian
population: South Asian
population: Latino
reference allele: G
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: QD

http://identifiers.org/exac.variant/1-149902782-C-CA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 149902782
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 149902783
    reference: chr 1
allele count: 3
allele frequency: 2.527337365840508e-5
allele num: 118702
alternate allele: CA
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000354941
  ensembl transcript: ENST00000361405
  gene symbol: MTMR11
  hgvsc: ENST00000361405.6:c.758dupT
  hgvsp: ENSP00000354941.6:p.Ser254GlufsTer255
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000482025
  gene symbol: MTMR11
  hgvsc: ENST00000482025.1:n.1591dupT
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000391668
  ensembl transcript: ENST00000439741
  gene symbol: MTMR11
  hgvsc: ENST00000439741.2:c.1365dupT
  hgvsp: ENSP00000391668.2:p.Glu456Ter
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000482343
  gene symbol: MTMR11
  hgvsc: ENST00000482343.1:n.945dupT
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000492824
  gene symbol: MTMR11
  hgvsc: ENST00000492824.1:n.1541dupT
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000383948
  ensembl transcript: ENST00000406732
  gene symbol: MTMR11
  hgvsc: ENST00000406732.3:c.*49dupT
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000466496
  gene symbol: MTMR11
  hgvsc: ENST00000466496.1:n.685dupT
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000490310
  gene symbol: MTMR11
  hgvsc: ENST00000490310.1:n.497dupT
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000358136
  ensembl transcript: ENST00000369140
  gene symbol: MTMR11
  hgvsc: ENST00000369140.3:c.1149dupT
  hgvsp: ENSP00000358136.3:p.Glu384Ter
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000495054
  gene symbol: MTMR11
  hgvsc: ENST00000495054.1:n.408dupT
  variant of: http://identifiers.org/hgnc/24307
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1649
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1272
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 696
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4242
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22270
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1786
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27361
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Glu456Ter
num of homozygotes: 0
population: South Asian
population: African
population: European (Finnish)
population: Latino
population: Other
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum

1-149902782-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 149902782
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 149902782
    reference: chr 1
allele count: 3
allele frequency: 2.527337365840508e-5
allele num: 118702
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000482343
  gene symbol: MTMR11
  hgvsc: ENST00000482343.1:n.946G>C
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000358136
  ensembl transcript: ENST00000369140
  gene symbol: MTMR11
  hgvsc: ENST00000369140.3:c.1150G>C
  hgvsp: ENSP00000358136.3:p.Glu384Gln
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000383948
  ensembl transcript: ENST00000406732
  gene symbol: MTMR11
  hgvsc: ENST00000406732.3:c.*50G>C
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000391668
  ensembl transcript: ENST00000439741
  gene symbol: MTMR11
  hgvsc: ENST00000439741.2:c.1366G>C
  hgvsp: ENSP00000391668.2:p.Glu456Gln
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000354941
  ensembl transcript: ENST00000361405
  gene symbol: MTMR11
  hgvsc: ENST00000361405.6:c.759G>C
  hgvsp: ENST00000361405.6:c.759G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000495054
  gene symbol: MTMR11
  hgvsc: ENST00000495054.1:n.409G>C
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000492824
  gene symbol: MTMR11
  hgvsc: ENST00000492824.1:n.1542G>C
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000490310
  gene symbol: MTMR11
  hgvsc: ENST00000490310.1:n.498G>C
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000482025
  gene symbol: MTMR11
  hgvsc: ENST00000482025.1:n.1592G>C
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000466496
  gene symbol: MTMR11
  hgvsc: ENST00000466496.1:n.686G>C
  variant of: http://identifiers.org/hgnc/24307
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1786
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4242
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22270
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 696
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1649
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1272
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27361
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1036
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 44249
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Glu456Gln
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Other
population: East Asian
population: Latino
population: European (Finnish)
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum

1-149902787-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 149902787
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 149902787
    reference: chr 1
allele count: 1
allele frequency: 8.43198758811427e-6
allele num: 118596
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000492824
  gene symbol: MTMR11
  hgvsc: ENST00000492824.1:n.1537T>A
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000482343
  gene symbol: MTMR11
  hgvsc: ENST00000482343.1:n.941T>A
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000495054
  gene symbol: MTMR11
  hgvsc: ENST00000495054.1:n.404T>A
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000391668
  ensembl transcript: ENST00000439741
  gene symbol: MTMR11
  hgvsc: ENST00000439741.2:c.1361T>A
  hgvsp: ENSP00000391668.2:p.Phe454Tyr
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000490310
  gene symbol: MTMR11
  hgvsc: ENST00000490310.1:n.493T>A
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000383948
  ensembl transcript: ENST00000406732
  gene symbol: MTMR11
  hgvsc: ENST00000406732.3:c.*45T>A
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000358136
  ensembl transcript: ENST00000369140
  gene symbol: MTMR11
  hgvsc: ENST00000369140.3:c.1145T>A
  hgvsp: ENSP00000358136.3:p.Phe382Tyr
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000466496
  gene symbol: MTMR11
  hgvsc: ENST00000466496.1:n.681T>A
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000482025
  gene symbol: MTMR11
  hgvsc: ENST00000482025.1:n.1587T>A
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000354941
  ensembl transcript: ENST00000361405
  gene symbol: MTMR11
  hgvsc: ENST00000361405.6:c.754T>A
  hgvsp: ENSP00000354941.6:p.Ser252Thr
  variant of: http://identifiers.org/hgnc/24307
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4153
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1728
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1347
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 678
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1776
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22161
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27441
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1030
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 176
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 706
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Phe454Tyr
num of homozygotes: 0
population: African
population: South Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
reference allele: A
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: QD

http://identifiers.org/exac.variant/1-149902791-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 149902791
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 149902791
    reference: chr 1
allele count: 3
allele frequency: 2.535282684019268e-5
allele num: 118330
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000466496
  gene symbol: MTMR11
  hgvsc: ENST00000466496.1:n.677G>T
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000391668
  ensembl transcript: ENST00000439741
  gene symbol: MTMR11
  hgvsc: ENST00000439741.2:c.1357G>T
  hgvsp: ENSP00000391668.2:p.Glu453Ter
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000482025
  gene symbol: MTMR11
  hgvsc: ENST00000482025.1:n.1583G>T
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000383948
  ensembl transcript: ENST00000406732
  gene symbol: MTMR11
  hgvsc: ENST00000406732.3:c.*41G>T
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000354941
  ensembl transcript: ENST00000361405
  gene symbol: MTMR11
  hgvsc: ENST00000361405.6:c.750G>T
  hgvsp: ENSP00000354941.6:p.Leu250Phe
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000358136
  ensembl transcript: ENST00000369140
  gene symbol: MTMR11
  hgvsc: ENST00000369140.3:c.1141G>T
  hgvsp: ENSP00000358136.3:p.Glu381Ter
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000492824
  gene symbol: MTMR11
  hgvsc: ENST00000492824.1:n.1533G>T
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000490310
  gene symbol: MTMR11
  hgvsc: ENST00000490310.1:n.489G>T
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000482343
  gene symbol: MTMR11
  hgvsc: ENST00000482343.1:n.937G>T
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000495054
  gene symbol: MTMR11
  hgvsc: ENST00000495054.1:n.400G>T
  variant of: http://identifiers.org/hgnc/24307
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1846
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1862
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22006
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1433
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27248
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4186
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 690
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1253
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 939
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 161
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Glu453Ter
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: African
population: Other
reference allele: C
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: DP
site quality: ClippingRankSum

http://identifiers.org/exac.variant/1-149902791-CA-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 149902791
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 149902790
    reference: chr 1
allele count: 1
allele frequency: 8.450942280064228e-6
allele num: 118330
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000482343
  gene symbol: MTMR11
  hgvsc: ENST00000482343.1:n.936delT
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000482025
  gene symbol: MTMR11
  hgvsc: ENST00000482025.1:n.1582delT
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000354941
  ensembl transcript: ENST00000361405
  gene symbol: MTMR11
  hgvsc: ENST00000361405.6:c.749delT
  hgvsp: ENSP00000354941.6:p.Leu250Ter
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000383948
  ensembl transcript: ENST00000406732
  gene symbol: MTMR11
  hgvsc: ENST00000406732.3:c.*40delT
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000490310
  gene symbol: MTMR11
  hgvsc: ENST00000490310.1:n.488delT
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000466496
  gene symbol: MTMR11
  hgvsc: ENST00000466496.1:n.676delT
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000492824
  gene symbol: MTMR11
  hgvsc: ENST00000492824.1:n.1532delT
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000358136
  ensembl transcript: ENST00000369140
  gene symbol: MTMR11
  hgvsc: ENST00000369140.3:c.1140delT
  hgvsp: ENSP00000358136.3:p.Phe380LeufsTer24
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000391668
  ensembl transcript: ENST00000439741
  gene symbol: MTMR11
  hgvsc: ENST00000439741.2:c.1356delT
  hgvsp: ENSP00000391668.2:p.Phe452LeufsTer24
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000495054
  gene symbol: MTMR11
  hgvsc: ENST00000495054.1:n.399delT
  variant of: http://identifiers.org/hgnc/24307
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27248
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1862
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 690
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22006
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4186
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1846
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1433
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5405
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 174
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2522
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Phe452LeufsTer24
num of homozygotes: 0
population: European (Finnish)
population: Other
population: African
population: European (Non-Finnish)
population: East Asian
population: Latino
population: South Asian
reference allele: CA
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum

1-149902800-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 149902800
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 149902800
    reference: chr 1
allele count: 1
allele frequency: 8.503979862575686e-6
allele num: 117592
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000383948
  ensembl transcript: ENST00000406732
  gene symbol: MTMR11
  hgvsc: ENST00000406732.3:c.*32G>C
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000495054
  gene symbol: MTMR11
  hgvsc: ENST00000495054.1:n.391G>C
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000358136
  ensembl transcript: ENST00000369140
  gene symbol: MTMR11
  hgvsc: ENST00000369140.3:c.1132G>C
  hgvsp: ENSP00000358136.3:p.Ala378Pro
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000490310
  gene symbol: MTMR11
  hgvsc: ENST00000490310.1:n.480G>C
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000466496
  gene symbol: MTMR11
  hgvsc: ENST00000466496.1:n.668G>C
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000482343
  gene symbol: MTMR11
  hgvsc: ENST00000482343.1:n.928G>C
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000354941
  ensembl transcript: ENST00000361405
  gene symbol: MTMR11
  hgvsc: ENST00000361405.6:c.741G>C
  hgvsp: ENSP00000354941.6:p.Gln247His
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000391668
  ensembl transcript: ENST00000439741
  gene symbol: MTMR11
  hgvsc: ENST00000439741.2:c.1348G>C
  hgvsp: ENSP00000391668.2:p.Ala450Pro
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000482025
  gene symbol: MTMR11
  hgvsc: ENST00000482025.1:n.1574G>C
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000492824
  gene symbol: MTMR11
  hgvsc: ENST00000492824.1:n.1524G>C
  variant of: http://identifiers.org/hgnc/24307
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2260
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2076
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26664
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 667
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1746
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21742
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4079
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 753
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1171
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ala450Pro
num of homozygotes: 0
population: African
population: Other
population: Latino
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: European (Finnish)
reference allele: C
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD

1-149902804-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 149902804
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 149902804
    reference: chr 1
allele count: 1
allele frequency: 8.503256747334228e-6
allele num: 117602
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000492824
  gene symbol: MTMR11
  hgvsc: ENST00000492824.1:n.1520T>C
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000383948
  ensembl transcript: ENST00000406732
  gene symbol: MTMR11
  hgvsc: ENST00000406732.3:c.*28T>C
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000482025
  gene symbol: MTMR11
  hgvsc: ENST00000482025.1:n.1570T>C
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000354941
  ensembl transcript: ENST00000361405
  gene symbol: MTMR11
  hgvsc: ENST00000361405.6:c.737T>C
  hgvsp: ENSP00000354941.6:p.Phe246Ser
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000391668
  ensembl transcript: ENST00000439741
  gene symbol: MTMR11
  hgvsc: ENST00000439741.2:c.1344T>C
  hgvsp: ENST00000439741.2:c.1344T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000466496
  gene symbol: MTMR11
  hgvsc: ENST00000466496.1:n.664T>C
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000490310
  gene symbol: MTMR11
  hgvsc: ENST00000490310.1:n.476T>C
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000495054
  gene symbol: MTMR11
  hgvsc: ENST00000495054.1:n.387T>C
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000358136
  ensembl transcript: ENST00000369140
  gene symbol: MTMR11
  hgvsc: ENST00000369140.3:c.1128T>C
  hgvsp: ENST00000369140.3:c.1128T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000482343
  gene symbol: MTMR11
  hgvsc: ENST00000482343.1:n.924T>C
  variant of: http://identifiers.org/hgnc/24307
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3911
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1776
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1856
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27212
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21600
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 647
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2243
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 757
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 405
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Phe246Ser
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Finnish)
population: Latino
population: Other
population: European (Non-Finnish)
population: African
reference allele: A
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum

1-149902810-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 149902810
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 149902810
    reference: chr 1
allele count: 5
allele frequency: 4.274892700193225e-5
allele num: 116962
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000466496
  gene symbol: MTMR11
  hgvsc: ENST00000466496.1:n.658G>A
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000358136
  ensembl transcript: ENST00000369140
  gene symbol: MTMR11
  hgvsc: ENST00000369140.3:c.1122G>A
  hgvsp: ENST00000369140.3:c.1122G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000492824
  gene symbol: MTMR11
  hgvsc: ENST00000492824.1:n.1514G>A
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000482343
  gene symbol: MTMR11
  hgvsc: ENST00000482343.1:n.918G>A
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000383948
  ensembl transcript: ENST00000406732
  gene symbol: MTMR11
  hgvsc: ENST00000406732.3:c.*22G>A
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000495054
  gene symbol: MTMR11
  hgvsc: ENST00000495054.1:n.381G>A
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000490310
  gene symbol: MTMR11
  hgvsc: ENST00000490310.1:n.470G>A
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000482025
  gene symbol: MTMR11
  hgvsc: ENST00000482025.1:n.1564G>A
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000354941
  ensembl transcript: ENST00000361405
  gene symbol: MTMR11
  hgvsc: ENST00000361405.6:c.731G>A
  hgvsp: ENSP00000354941.6:p.Ser244Asn
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000391668
  ensembl transcript: ENST00000439741
  gene symbol: MTMR11
  hgvsc: ENST00000439741.2:c.1338G>A
  hgvsp: ENST00000439741.2:c.1338G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24307
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2059
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26884
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1841
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 659
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21250
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2621
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3919
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 853
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 726
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 167
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Ser244Asn
num of homozygotes: 0
population: African
population: Other
population: Latino
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: East Asian
reference allele: C
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum

1-149902816-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 149902816
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 149902816
    reference: chr 1
allele count: 1
allele frequency: 8.581628449814637e-6
allele num: 116528
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000490310
  gene symbol: MTMR11
  hgvsc: ENST00000490310.1:n.464C>T
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000383948
  ensembl transcript: ENST00000406732
  gene symbol: MTMR11
  hgvsc: ENST00000406732.3:c.*16C>T
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000482025
  gene symbol: MTMR11
  hgvsc: ENST00000482025.1:n.1558C>T
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000495054
  gene symbol: MTMR11
  hgvsc: ENST00000495054.1:n.375C>T
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000466496
  gene symbol: MTMR11
  hgvsc: ENST00000466496.1:n.652C>T
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000492824
  gene symbol: MTMR11
  hgvsc: ENST00000492824.1:n.1508C>T
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000354941
  ensembl transcript: ENST00000361405
  gene symbol: MTMR11
  hgvsc: ENST00000361405.6:c.725C>T
  hgvsp: ENSP00000354941.6:p.Ser242Phe
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000358136
  ensembl transcript: ENST00000369140
  gene symbol: MTMR11
  hgvsc: ENST00000369140.3:c.1116C>T
  hgvsp: ENST00000369140.3:c.1116C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000391668
  ensembl transcript: ENST00000439741
  gene symbol: MTMR11
  hgvsc: ENST00000439741.2:c.1332C>T
  hgvsp: ENST00000439741.2:c.1332C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000482343
  gene symbol: MTMR11
  hgvsc: ENST00000482343.1:n.912C>T
  variant of: http://identifiers.org/hgnc/24307
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2271
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3768
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26931
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21050
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2888
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 623
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1694
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 496
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 845
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 349
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Ser242Phe
num of homozygotes: 0
population: European (Finnish)
population: Other
population: South Asian
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
reference allele: G
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD

1-149902821-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 149902821
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 149902821
    reference: chr 1
allele count: 1
allele frequency: 8.619352169490942e-6
allele num: 116018
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000354941
  ensembl transcript: ENST00000361405
  gene symbol: MTMR11
  hgvsc: ENST00000361405.6:c.720C>T
  hgvsp: ENST00000361405.6:c.720C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000466496
  gene symbol: MTMR11
  hgvsc: ENST00000466496.1:n.647C>T
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000383948
  ensembl transcript: ENST00000406732
  gene symbol: MTMR11
  hgvsc: ENST00000406732.3:c.*11C>T
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000482343
  gene symbol: MTMR11
  hgvsc: ENST00000482343.1:n.907C>T
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000495054
  gene symbol: MTMR11
  hgvsc: ENST00000495054.1:n.370C>T
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000391668
  ensembl transcript: ENST00000439741
  gene symbol: MTMR11
  hgvsc: ENST00000439741.2:c.1327C>T
  hgvsp: ENSP00000391668.2:p.Gln443Ter
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000492824
  gene symbol: MTMR11
  hgvsc: ENST00000492824.1:n.1503C>T
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000482025
  gene symbol: MTMR11
  hgvsc: ENST00000482025.1:n.1553C>T
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000490310
  gene symbol: MTMR11
  hgvsc: ENST00000490310.1:n.459C>T
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000358136
  ensembl transcript: ENST00000369140
  gene symbol: MTMR11
  hgvsc: ENST00000369140.3:c.1111C>T
  hgvsp: ENSP00000358136.3:p.Gln371Ter
  variant of: http://identifiers.org/hgnc/24307
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3725
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 630
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26757
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1577
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3202
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2485
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20833
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 366
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 166
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Gln443Ter
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: Other
population: European (Non-Finnish)
population: South Asian
population: Latino
reference allele: G
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: QD

1-149902839-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 149902839
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 149902839
    reference: chr 1
allele count: 1
allele frequency: 8.889204949509316e-6
allele num: 112496
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000482025
  gene symbol: MTMR11
  hgvsc: ENST00000482025.1:n.1535T>C
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000354941
  ensembl transcript: ENST00000361405
  gene symbol: MTMR11
  hgvsc: ENST00000361405.6:c.702T>C
  hgvsp: ENST00000361405.6:c.702T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000391668
  ensembl transcript: ENST00000439741
  gene symbol: MTMR11
  hgvsc: ENST00000439741.2:c.1309T>C
  hgvsp: ENSP00000391668.2:p.Phe437Leu
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000492824
  gene symbol: MTMR11
  hgvsc: ENST00000492824.1:n.1485T>C
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000358136
  ensembl transcript: ENST00000369140
  gene symbol: MTMR11
  hgvsc: ENST00000369140.3:c.1093T>C
  hgvsp: ENSP00000358136.3:p.Phe365Leu
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000383948
  ensembl transcript: ENST00000406732
  gene symbol: MTMR11
  hgvsc: ENST00000406732.3:c.1058T>C
  hgvsp: ENSP00000383948.3:p.Leu353Pro
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000495054
  gene symbol: MTMR11
  hgvsc: ENST00000495054.1:n.352T>C
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000490310
  gene symbol: MTMR11
  hgvsc: ENST00000490310.1:n.441T>C
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000466496
  gene symbol: MTMR11
  hgvsc: ENST00000466496.1:n.629T>C
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000482343
  gene symbol: MTMR11
  hgvsc: ENST00000482343.1:n.889T>C
  variant of: http://identifiers.org/hgnc/24307
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23842
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5864
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4161
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1687
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3322
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19666
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1228
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40171
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Phe437Leu
num of homozygotes: 0
population: Other
population: East Asian
population: European (Finnish)
population: African
population: South Asian
population: European (Non-Finnish)
population: Latino
reference allele: A
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum

1-149902839-AGAG-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 149902839
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 149902836
    reference: chr 1
allele count: 1
allele frequency: 8.889204949509316e-6
allele num: 112496
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000383948
  ensembl transcript: ENST00000406732
  gene symbol: MTMR11
  hgvsc: ENST00000406732.3:c.1055_1057delCTC
  hgvsp: ENSP00000383948.3:p.Pro352del
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000495054
  gene symbol: MTMR11
  hgvsc: ENST00000495054.1:n.349_351delCTC
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000482025
  gene symbol: MTMR11
  hgvsc: ENST00000482025.1:n.1532_1534delCTC
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000482343
  gene symbol: MTMR11
  hgvsc: ENST00000482343.1:n.886_888delCTC
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000466496
  gene symbol: MTMR11
  hgvsc: ENST00000466496.1:n.626_628delCTC
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000358136
  ensembl transcript: ENST00000369140
  gene symbol: MTMR11
  hgvsc: ENST00000369140.3:c.1090_1092delCTC
  hgvsp: ENSP00000358136.3:p.Leu364del
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000354941
  ensembl transcript: ENST00000361405
  gene symbol: MTMR11
  hgvsc: ENST00000361405.6:c.699_701delCTC
  hgvsp: ENSP00000354941.6:p.Ser235del
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000490310
  gene symbol: MTMR11
  hgvsc: ENST00000490310.1:n.438_440delCTC
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: true
  consequence: inframe_deletion
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000391668
  ensembl transcript: ENST00000439741
  gene symbol: MTMR11
  hgvsc: ENST00000439741.2:c.1306_1308delCTC
  hgvsp: ENSP00000391668.2:p.Leu436del
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000492824
  gene symbol: MTMR11
  hgvsc: ENST00000492824.1:n.1482_1484delCTC
  variant of: http://identifiers.org/hgnc/24307
canonical: true
consequence: inframe deletion
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4161
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5864
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19666
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23842
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1687
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3322
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1228
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 243
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Leu436del
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Latino
population: African
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: AGAG
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP

1-149902849-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 149902849
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 149902849
    reference: chr 1
allele count: 1
allele frequency: 9.211156552816772e-6
allele num: 108564
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000358136
  ensembl transcript: ENST00000369140
  gene symbol: MTMR11
  hgvsc: ENST00000369140.3:c.1083G>A
  hgvsp: ENST00000369140.3:c.1083G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000482343
  gene symbol: MTMR11
  hgvsc: ENST00000482343.1:n.879G>A
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000391668
  ensembl transcript: ENST00000439741
  gene symbol: MTMR11
  hgvsc: ENST00000439741.2:c.1299G>A
  hgvsp: ENST00000439741.2:c.1299G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000354941
  ensembl transcript: ENST00000361405
  gene symbol: MTMR11
  hgvsc: ENST00000361405.6:c.692G>A
  hgvsp: ENSP00000354941.6:p.Cys231Tyr
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000492824
  gene symbol: MTMR11
  hgvsc: ENST00000492824.1:n.1475G>A
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000466496
  gene symbol: MTMR11
  hgvsc: ENST00000466496.1:n.619G>A
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000490310
  gene symbol: MTMR11
  hgvsc: ENST00000490310.1:n.431G>A
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000383948
  ensembl transcript: ENST00000406732
  gene symbol: MTMR11
  hgvsc: ENST00000406732.3:c.1048G>A
  hgvsp: ENSP00000383948.3:p.Val350Ile
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000482025
  gene symbol: MTMR11
  hgvsc: ENST00000482025.1:n.1525G>A
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000495054
  gene symbol: MTMR11
  hgvsc: ENST00000495054.1:n.342G>A
  variant of: http://identifiers.org/hgnc/24307
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9827
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17498
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2513
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19619
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5913
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3087
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 334
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 126
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 589
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Cys231Tyr
num of homozygotes: 0
population: Other
population: Latino
population: South Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
reference allele: C
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum

1-149902852-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 149902852
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 149902852
    reference: chr 1
allele count: 22
allele frequency: 2.056574494737039e-4
allele num: 106974
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000354941
  ensembl transcript: ENST00000361405
  gene symbol: MTMR11
  hgvsc: ENST00000361405.6:c.689G>A
  hgvsp: ENSP00000354941.6:p.Arg230Gln
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000482025
  gene symbol: MTMR11
  hgvsc: ENST00000482025.1:n.1522G>A
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000383948
  ensembl transcript: ENST00000406732
  gene symbol: MTMR11
  hgvsc: ENST00000406732.3:c.1045G>A
  hgvsp: ENSP00000383948.3:p.Gly349Ser
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000492824
  gene symbol: MTMR11
  hgvsc: ENST00000492824.1:n.1472G>A
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000490310
  gene symbol: MTMR11
  hgvsc: ENST00000490310.1:n.428G>A
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000466496
  gene symbol: MTMR11
  hgvsc: ENST00000466496.1:n.616G>A
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000358136
  ensembl transcript: ENST00000369140
  gene symbol: MTMR11
  hgvsc: ENST00000369140.3:c.1080G>A
  hgvsp: ENST00000369140.3:c.1080G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000495054
  gene symbol: MTMR11
  hgvsc: ENST00000495054.1:n.339G>A
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000391668
  ensembl transcript: ENST00000439741
  gene symbol: MTMR11
  hgvsc: ENST00000439741.2:c.1296G>A
  hgvsp: ENST00000439741.2:c.1296G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000482343
  gene symbol: MTMR11
  hgvsc: ENST00000482343.1:n.876G>A
  variant of: http://identifiers.org/hgnc/24307
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2812
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 6525
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11405
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16486
  bin: 2.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 548
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18196
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2982
  bin: 3.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 277
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3368
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Arg230Gln
num of homozygotes: 0
population: Other
population: South Asian
population: European (Non-Finnish)
population: Latino
population: East Asian
population: African
population: European (Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum

1-149902853-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 149902853
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 149902853
    reference: chr 1
allele count: 10
allele frequency: 9.393905234283997e-5
allele num: 106452
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000383948
  ensembl transcript: ENST00000406732
  gene symbol: MTMR11
  hgvsc: ENST00000406732.3:c.1044C>T
  hgvsp: ENST00000406732.3:c.1044C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000358136
  ensembl transcript: ENST00000369140
  gene symbol: MTMR11
  hgvsc: ENST00000369140.3:c.1079C>T
  hgvsp: ENSP00000358136.3:p.Pro360Leu
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000492824
  gene symbol: MTMR11
  hgvsc: ENST00000492824.1:n.1471C>T
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000495054
  gene symbol: MTMR11
  hgvsc: ENST00000495054.1:n.338C>T
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000391668
  ensembl transcript: ENST00000439741
  gene symbol: MTMR11
  hgvsc: ENST00000439741.2:c.1295C>T
  hgvsp: ENSP00000391668.2:p.Pro432Leu
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000490310
  gene symbol: MTMR11
  hgvsc: ENST00000490310.1:n.427C>T
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000482025
  gene symbol: MTMR11
  hgvsc: ENST00000482025.1:n.1521C>T
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000354941
  ensembl transcript: ENST00000361405
  gene symbol: MTMR11
  hgvsc: ENST00000361405.6:c.688C>T
  hgvsp: ENSP00000354941.6:p.Arg230Trp
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000466496
  gene symbol: MTMR11
  hgvsc: ENST00000466496.1:n.615C>T
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000482343
  gene symbol: MTMR11
  hgvsc: ENST00000482343.1:n.875C>T
  variant of: http://identifiers.org/hgnc/24307
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 532
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11906
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6759
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2846
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2857
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17855
  bin: 2.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16193
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 151
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 146
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2568
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Pro432Leu
num of homozygotes: 0
population: South Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
reference allele: G
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: DP

1-149902857-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 149902857
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 149902857
    reference: chr 1
allele count: 1
allele frequency: 9.527983688091925e-6
allele num: 104954
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000482025
  gene symbol: MTMR11
  hgvsc: ENST00000482025.1:n.1517G>C
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000354941
  ensembl transcript: ENST00000361405
  gene symbol: MTMR11
  hgvsc: ENST00000361405.6:c.684G>C
  hgvsp: ENSP00000354941.6:p.Arg228Ser
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000466496
  gene symbol: MTMR11
  hgvsc: ENST00000466496.1:n.611G>C
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000383948
  ensembl transcript: ENST00000406732
  gene symbol: MTMR11
  hgvsc: ENST00000406732.3:c.1040G>C
  hgvsp: ENSP00000383948.3:p.Gly347Ala
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000495054
  gene symbol: MTMR11
  hgvsc: ENST00000495054.1:n.334G>C
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000391668
  ensembl transcript: ENST00000439741
  gene symbol: MTMR11
  hgvsc: ENST00000439741.2:c.1291G>C
  hgvsp: ENSP00000391668.2:p.Ala431Pro
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000358136
  ensembl transcript: ENST00000369140
  gene symbol: MTMR11
  hgvsc: ENST00000369140.3:c.1075G>C
  hgvsp: ENSP00000358136.3:p.Ala359Pro
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000492824
  gene symbol: MTMR11
  hgvsc: ENST00000492824.1:n.1467G>C
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000490310
  gene symbol: MTMR11
  hgvsc: ENST00000490310.1:n.423G>C
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000482343
  gene symbol: MTMR11
  hgvsc: ENST00000482343.1:n.871G>C
  variant of: http://identifiers.org/hgnc/24307
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 13796
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3196
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2629
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14959
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 453
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16366
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7448
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala431Pro
num of homozygotes: 0
population: African
population: Latino
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: European (Finnish)
population: Other
reference allele: C
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD

1-149902861-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 149902861
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 149902861
    reference: chr 1
allele count: 2
allele frequency: 1.945790282723328e-5
allele num: 102786
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000492824
  gene symbol: MTMR11
  hgvsc: ENST00000492824.1:n.1467-4T>C
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000490310
  gene symbol: MTMR11
  hgvsc: ENST00000490310.1:n.419T>C
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000482025
  gene symbol: MTMR11
  hgvsc: ENST00000482025.1:n.1517-4T>C
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000383948
  ensembl transcript: ENST00000406732
  gene symbol: MTMR11
  hgvsc: ENST00000406732.3:c.1040-4T>C
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000354941
  ensembl transcript: ENST00000361405
  gene symbol: MTMR11
  hgvsc: ENST00000361405.6:c.684-4T>C
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000391668
  ensembl transcript: ENST00000439741
  gene symbol: MTMR11
  hgvsc: ENST00000439741.2:c.1291-4T>C
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000495054
  gene symbol: MTMR11
  hgvsc: ENST00000495054.1:n.334-4T>C
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000466496
  gene symbol: MTMR11
  hgvsc: ENST00000466496.1:n.611-4T>C
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000358136
  ensembl transcript: ENST00000369140
  gene symbol: MTMR11
  hgvsc: ENST00000369140.3:c.1075-4T>C
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000482343
  gene symbol: MTMR11
  hgvsc: ENST00000482343.1:n.871-4T>C
  variant of: http://identifiers.org/hgnc/24307
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13682
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3942
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8375
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17104
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2286
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12855
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 324
  bin: 1.75e1
  variant carriers: 0
hgvs: c.1291-4T>C
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
population: Other
population: South Asian
population: East Asian
reference allele: A
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: QD

1-149902868-A-AT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 149902868
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 149902869
    reference: chr 1
allele count: 139
allele frequency: 1.373599225250509e-3
allele num: 101194
alternate allele: AT
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000466496
  gene symbol: MTMR11
  hgvsc: ENST00000466496.1:n.611-12dupA
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000391668
  ensembl transcript: ENST00000439741
  gene symbol: MTMR11
  hgvsc: ENST00000439741.2:c.1291-12dupA
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000354941
  ensembl transcript: ENST00000361405
  gene symbol: MTMR11
  hgvsc: ENST00000361405.6:c.684-12dupA
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000482025
  gene symbol: MTMR11
  hgvsc: ENST00000482025.1:n.1517-12dupA
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000492824
  gene symbol: MTMR11
  hgvsc: ENST00000492824.1:n.1467-12dupA
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000490310
  gene symbol: MTMR11
  hgvsc: ENST00000490310.1:n.411dupA
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000383948
  ensembl transcript: ENST00000406732
  gene symbol: MTMR11
  hgvsc: ENST00000406732.3:c.1040-12dupA
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000495054
  gene symbol: MTMR11
  hgvsc: ENST00000495054.1:n.334-12dupA
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000358136
  ensembl transcript: ENST00000369140
  gene symbol: MTMR11
  hgvsc: ENST00000369140.3:c.1075-12dupA
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000482343
  gene symbol: MTMR11
  hgvsc: ENST00000482343.1:n.871-12dupA
  variant of: http://identifiers.org/hgnc/24307
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4751
  bin: 1.75e1
  variant carriers: 29
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9038
  bin: 7.5e0
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1994
  bin: 3.25e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11696
  bin: 2.25e1
  variant carriers: 44
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10949
  bin: 2.75e1
  variant carriers: 32
genotype depth: GenotypeDepth
  all individuals: 791
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19663
  bin: 1.25e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 469
  bin: 3.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 4446
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2360
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 909
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 148
  bin: 9.25e1
  variant carriers: 1
num of homozygotes: 0
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Other
reference allele: A
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum

1-149902879-G-GTA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 149902879
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 149902881
    reference: chr 1
allele count: 1
allele frequency: 1.029548028415526e-5
allele num: 97130
alternate allele: GTA
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000383948
  ensembl transcript: ENST00000406732
  gene symbol: MTMR11
  hgvsc: ENST00000406732.3:c.1040-23_1040-22insTA
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000490310
  gene symbol: MTMR11
  hgvsc: ENST00000490310.1:n.400_401insTA
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000482025
  gene symbol: MTMR11
  hgvsc: ENST00000482025.1:n.1517-23_1517-22insTA
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000482343
  gene symbol: MTMR11
  hgvsc: ENST00000482343.1:n.871-23_871-22insTA
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000358136
  ensembl transcript: ENST00000369140
  gene symbol: MTMR11
  hgvsc: ENST00000369140.3:c.1075-23_1075-22insTA
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000391668
  ensembl transcript: ENST00000439741
  gene symbol: MTMR11
  hgvsc: ENST00000439741.2:c.1291-23_1291-22insTA
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000466496
  gene symbol: MTMR11
  hgvsc: ENST00000466496.1:n.611-23_611-22insTA
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000492824
  gene symbol: MTMR11
  hgvsc: ENST00000492824.1:n.1467-23_1467-22insTA
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000495054
  gene symbol: MTMR11
  hgvsc: ENST00000495054.1:n.334-23_334-22insTA
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000354941
  ensembl transcript: ENST00000361405
  gene symbol: MTMR11
  hgvsc: ENST00000361405.6:c.684-23_684-22insTA
  variant of: http://identifiers.org/hgnc/24307
canonical: false
consequence: non coding transcript exon
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 438
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6713
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10277
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7573
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7616
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24012
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1356
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1362
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3299
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 315
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 597
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12213
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Other
population: South Asian
population: East Asian
population: Latino
reference allele: G
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum

1-149902880-G-GCTCTGGCCCCCTGCTTCTCTGCTACTTCTGGTGTCTTT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 149902880
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 149902918
    reference: chr 1
allele count: 1
allele frequency: 1.033484911120298e-5
allele num: 96760
alternate allele: GCTCTGGCCCCCTGCTTCTCTGCTACTTCTGGTGTCTTT
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000482025
  gene symbol: MTMR11
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000495054
  gene symbol: MTMR11
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000490310
  gene symbol: MTMR11
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000358136
  ensembl transcript: ENST00000369140
  gene symbol: MTMR11
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000466496
  gene symbol: MTMR11
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000383948
  ensembl transcript: ENST00000406732
  gene symbol: MTMR11
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000354941
  ensembl transcript: ENST00000361405
  gene symbol: MTMR11
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000482343
  gene symbol: MTMR11
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000492824
  gene symbol: MTMR11
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000391668
  ensembl transcript: ENST00000439741
  gene symbol: MTMR11
  variant of: http://identifiers.org/hgnc/24307
canonical: false
consequence: non coding transcript exon
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 1415
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24237
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1317
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10402
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6396
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 434
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7880
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7261
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 351
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1705
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 814
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 724
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 600
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 573
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: DP

1-149902889-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 149902889
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 149902889
    reference: chr 1
allele count: 1
allele frequency: 1.080497028633171e-5
allele num: 92550
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000482343
  gene symbol: MTMR11
  hgvsc: ENST00000482343.1:n.871-32T>A
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000495054
  gene symbol: MTMR11
  hgvsc: ENST00000495054.1:n.334-32T>A
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000383948
  ensembl transcript: ENST00000406732
  gene symbol: MTMR11
  hgvsc: ENST00000406732.3:c.1040-32T>A
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000466496
  gene symbol: MTMR11
  hgvsc: ENST00000466496.1:n.611-32T>A
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000490310
  gene symbol: MTMR11
  hgvsc: ENST00000490310.1:n.391T>A
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000482025
  gene symbol: MTMR11
  hgvsc: ENST00000482025.1:n.1517-32T>A
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000358136
  ensembl transcript: ENST00000369140
  gene symbol: MTMR11
  hgvsc: ENST00000369140.3:c.1075-32T>A
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000391668
  ensembl transcript: ENST00000439741
  gene symbol: MTMR11
  hgvsc: ENST00000439741.2:c.1291-32T>A
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000492824
  gene symbol: MTMR11
  hgvsc: ENST00000492824.1:n.1467-32T>A
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000354941
  ensembl transcript: ENST00000361405
  gene symbol: MTMR11
  hgvsc: ENST00000361405.6:c.684-32T>A
  variant of: http://identifiers.org/hgnc/24307
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 996
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4940
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3781
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11805
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10891
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24519
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1976
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 213
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2589
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7881
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1067
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: South Asian
population: Other
reference allele: A
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum

1-149902893-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 149902893
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 149902893
    reference: chr 1
allele count: 1
allele frequency: 1.100182630316633e-5
allele num: 90894
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000466496
  gene symbol: MTMR11
  hgvsc: ENST00000466496.1:n.611-36C>T
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000383948
  ensembl transcript: ENST00000406732
  gene symbol: MTMR11
  hgvsc: ENST00000406732.3:c.1040-36C>T
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000495054
  gene symbol: MTMR11
  hgvsc: ENST00000495054.1:n.334-36C>T
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000358136
  ensembl transcript: ENST00000369140
  gene symbol: MTMR11
  hgvsc: ENST00000369140.3:c.1075-36C>T
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000391668
  ensembl transcript: ENST00000439741
  gene symbol: MTMR11
  hgvsc: ENST00000439741.2:c.1291-36C>T
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000354941
  ensembl transcript: ENST00000361405
  gene symbol: MTMR11
  hgvsc: ENST00000361405.6:c.684-36C>T
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000482025
  gene symbol: MTMR11
  hgvsc: ENST00000482025.1:n.1517-36C>T
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000490310
  gene symbol: MTMR11
  hgvsc: ENST00000490310.1:n.387C>T
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000482343
  gene symbol: MTMR11
  hgvsc: ENST00000482343.1:n.871-36C>T
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000492824
  gene symbol: MTMR11
  hgvsc: ENST00000492824.1:n.1467-36C>T
  variant of: http://identifiers.org/hgnc/24307
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11568
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 946
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3260
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4466
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12337
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24239
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2090
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8030
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 406
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1021
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 955
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: South Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: DP

1-149902904-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 149902904
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 149902904
    reference: chr 1
allele count: 1
allele frequency: 1.167733196319305e-5
allele num: 85636
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000358136
  ensembl transcript: ENST00000369140
  gene symbol: MTMR11
  hgvsc: ENST00000369140.3:c.1075-47C>G
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000383948
  ensembl transcript: ENST00000406732
  gene symbol: MTMR11
  hgvsc: ENST00000406732.3:c.1040-47C>G
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000466496
  gene symbol: MTMR11
  hgvsc: ENST00000466496.1:n.611-47C>G
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000490310
  gene symbol: MTMR11
  hgvsc: ENST00000490310.1:n.376C>G
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000492824
  gene symbol: MTMR11
  hgvsc: ENST00000492824.1:n.1467-47C>G
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000391668
  ensembl transcript: ENST00000439741
  gene symbol: MTMR11
  hgvsc: ENST00000439741.2:c.1291-47C>G
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000482343
  gene symbol: MTMR11
  hgvsc: ENST00000482343.1:n.871-47C>G
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000354941
  ensembl transcript: ENST00000361405
  gene symbol: MTMR11
  hgvsc: ENST00000361405.6:c.684-47C>G
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000495054
  gene symbol: MTMR11
  hgvsc: ENST00000495054.1:n.334-47C>G
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000482025
  gene symbol: MTMR11
  hgvsc: ENST00000482025.1:n.1517-47C>G
  variant of: http://identifiers.org/hgnc/24307
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22466
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14743
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2058
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2224
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4428
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 773
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12183
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3163
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 137
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3888
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: African
population: Latino
population: European (Finnish)
population: South Asian
population: East Asian
reference allele: G
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ

1-149902906-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 149902906
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 149902906
    reference: chr 1
allele count: 0
allele frequency: 0.0e0
allele num: 82032
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000383948
  ensembl transcript: ENST00000406732
  gene symbol: MTMR11
  hgvsc: ENST00000406732.3:c.1040-49C>T
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000492824
  gene symbol: MTMR11
  hgvsc: ENST00000492824.1:n.1467-49C>T
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000354941
  ensembl transcript: ENST00000361405
  gene symbol: MTMR11
  hgvsc: ENST00000361405.6:c.684-49C>T
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000482343
  gene symbol: MTMR11
  hgvsc: ENST00000482343.1:n.871-49C>T
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000358136
  ensembl transcript: ENST00000369140
  gene symbol: MTMR11
  hgvsc: ENST00000369140.3:c.1075-49C>T
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000495054
  gene symbol: MTMR11
  hgvsc: ENST00000495054.1:n.334-49C>T
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000490310
  gene symbol: MTMR11
  hgvsc: ENST00000490310.1:n.374C>T
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000391668
  ensembl transcript: ENST00000439741
  gene symbol: MTMR11
  hgvsc: ENST00000439741.2:c.1291-49C>T
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000482025
  gene symbol: MTMR11
  hgvsc: ENST00000482025.1:n.1517-49C>T
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000466496
  gene symbol: MTMR11
  hgvsc: ENST00000466496.1:n.611-49C>T
  variant of: http://identifiers.org/hgnc/24307
canonical: false
consequence: non coding transcript exon
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 15443
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 742
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1860
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21849
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4657
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2233
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12067
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16697
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 612
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 654
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8312
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Finnish)
population: African
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ

1-149903102-TCTTA-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 149903102
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 149903098
    reference: chr 1
allele count: 1
allele frequency: 8.286926544683108e-6
allele num: 120672
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000492824
  gene symbol: MTMR11
  hgvsc: ENST00000492824.1:n.1467-249_1467-246delTAAG
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000482343
  gene symbol: MTMR11
  hgvsc: ENST00000482343.1:n.871-249_871-246delTAAG
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000466496
  gene symbol: MTMR11
  hgvsc: ENST00000466496.1:n.611-249_611-246delTAAG
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000495054
  gene symbol: MTMR11
  hgvsc: ENST00000495054.1:n.333+46_333+49delTAAG
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000391668
  ensembl transcript: ENST00000439741
  gene symbol: MTMR11
  hgvsc: ENST00000439741.2:c.1290+46_1290+49delTAAG
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000358136
  ensembl transcript: ENST00000369140
  gene symbol: MTMR11
  hgvsc: ENST00000369140.3:c.1074+46_1074+49delTAAG
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000490310
  gene symbol: MTMR11
  hgvsc: ENST00000490310.1:n.174_177delTAAG
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000383948
  ensembl transcript: ENST00000406732
  gene symbol: MTMR11
  hgvsc: ENST00000406732.3:c.1040-249_1040-246delTAAG
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000354941
  ensembl transcript: ENST00000361405
  gene symbol: MTMR11
  hgvsc: ENST00000361405.6:c.684-249_684-246delTAAG
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000482025
  gene symbol: MTMR11
  hgvsc: ENST00000482025.1:n.1517-249_1517-246delTAAG
  variant of: http://identifiers.org/hgnc/24307
canonical: false
consequence: non coding transcript exon
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 21696
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2094
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7787
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5540
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3192
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 871
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 976
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2077
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1347
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 520
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12952
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2834
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3972
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 920
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: African
population: East Asian
population: Latino
population: Other
reference allele: TCTTA
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: MQ

1-149903112-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 149903112
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 149903112
    reference: chr 1
allele count: 1
allele frequency: 8.277597510098669e-6
allele num: 120808
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000466496
  gene symbol: MTMR11
  hgvsc: ENST00000466496.1:n.611-255A>G
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000358136
  ensembl transcript: ENST00000369140
  gene symbol: MTMR11
  hgvsc: ENST00000369140.3:c.1074+40A>G
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000495054
  gene symbol: MTMR11
  hgvsc: ENST00000495054.1:n.333+40A>G
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000482025
  gene symbol: MTMR11
  hgvsc: ENST00000482025.1:n.1517-255A>G
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000391668
  ensembl transcript: ENST00000439741
  gene symbol: MTMR11
  hgvsc: ENST00000439741.2:c.1290+40A>G
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000482343
  gene symbol: MTMR11
  hgvsc: ENST00000482343.1:n.871-255A>G
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000354941
  ensembl transcript: ENST00000361405
  gene symbol: MTMR11
  hgvsc: ENST00000361405.6:c.684-255A>G
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000492824
  gene symbol: MTMR11
  hgvsc: ENST00000492824.1:n.1467-255A>G
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000490310
  gene symbol: MTMR11
  hgvsc: ENST00000490310.1:n.168A>G
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000383948
  ensembl transcript: ENST00000406732
  gene symbol: MTMR11
  hgvsc: ENST00000406732.3:c.1040-255A>G
  variant of: http://identifiers.org/hgnc/24307
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 811
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 521
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13020
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 851
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5516
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2072
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8853
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1347
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 873
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3187
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22022
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2811
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 331
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28280
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: South Asian
population: European (Finnish)
population: Other
population: Latino
population: European (Non-Finnish)
reference allele: T
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum

1-149903112-TTAG-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 149903112
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 149903109
    reference: chr 1
allele count: 6
allele frequency: 4.966558506059201e-5
allele num: 120808
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000358136
  ensembl transcript: ENST00000369140
  gene symbol: MTMR11
  hgvsc: ENST00000369140.3:c.1074+37_1074+39delCTA
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000492824
  gene symbol: MTMR11
  hgvsc: ENST00000492824.1:n.1467-258_1467-256delCTA
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000466496
  gene symbol: MTMR11
  hgvsc: ENST00000466496.1:n.611-258_611-256delCTA
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000482343
  gene symbol: MTMR11
  hgvsc: ENST00000482343.1:n.871-258_871-256delCTA
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000490310
  gene symbol: MTMR11
  hgvsc: ENST00000490310.1:n.165_167delCTA
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000495054
  gene symbol: MTMR11
  hgvsc: ENST00000495054.1:n.333+37_333+39delCTA
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000354941
  ensembl transcript: ENST00000361405
  gene symbol: MTMR11
  hgvsc: ENST00000361405.6:c.684-258_684-256delCTA
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000383948
  ensembl transcript: ENST00000406732
  gene symbol: MTMR11
  hgvsc: ENST00000406732.3:c.1040-258_1040-256delCTA
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000482025
  gene symbol: MTMR11
  hgvsc: ENST00000482025.1:n.1517-258_1517-256delCTA
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000391668
  ensembl transcript: ENST00000439741
  gene symbol: MTMR11
  hgvsc: ENST00000439741.2:c.1290+37_1290+39delCTA
  variant of: http://identifiers.org/hgnc/24307
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13020
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 873
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 8853
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 521
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2072
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22022
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3187
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 851
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5516
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1347
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 811
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8441
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 372
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: TTAG
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD

1-149903122-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 149903122
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 149903122
    reference: chr 1
allele count: 1
allele frequency: 8.271024945411235e-6
allele num: 120904
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000482025
  gene symbol: MTMR11
  hgvsc: ENST00000482025.1:n.1517-265C>T
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000358136
  ensembl transcript: ENST00000369140
  gene symbol: MTMR11
  hgvsc: ENST00000369140.3:c.1074+30C>T
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000383948
  ensembl transcript: ENST00000406732
  gene symbol: MTMR11
  hgvsc: ENST00000406732.3:c.1040-265C>T
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000354941
  ensembl transcript: ENST00000361405
  gene symbol: MTMR11
  hgvsc: ENST00000361405.6:c.684-265C>T
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000391668
  ensembl transcript: ENST00000439741
  gene symbol: MTMR11
  hgvsc: ENST00000439741.2:c.1290+30C>T
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000466496
  gene symbol: MTMR11
  hgvsc: ENST00000466496.1:n.611-265C>T
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000482343
  gene symbol: MTMR11
  hgvsc: ENST00000482343.1:n.871-265C>T
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000490310
  gene symbol: MTMR11
  hgvsc: ENST00000490310.1:n.158C>T
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000492824
  gene symbol: MTMR11
  hgvsc: ENST00000492824.1:n.1467-265C>T
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000495054
  gene symbol: MTMR11
  hgvsc: ENST00000495054.1:n.333+30C>T
  variant of: http://identifiers.org/hgnc/24307
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 399
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1769
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1236
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2778
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21983
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1004
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 741
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 872
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8886
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 743
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12591
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5018
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 132
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1429
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: South Asian
population: African
population: European (Non-Finnish)
population: Other
population: Latino
reference allele: G
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: MQ

1-149903122-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 149903122
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 149903122
    reference: chr 1
allele count: 6532
allele frequency: 5.402633494342619e-2
allele num: 120904
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000383948
  ensembl transcript: ENST00000406732
  gene symbol: MTMR11
  hgvsc: ENST00000406732.3:c.1040-265C>G
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000482343
  gene symbol: MTMR11
  hgvsc: ENST00000482343.1:n.871-265C>G
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000354941
  ensembl transcript: ENST00000361405
  gene symbol: MTMR11
  hgvsc: ENST00000361405.6:c.684-265C>G
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000490310
  gene symbol: MTMR11
  hgvsc: ENST00000490310.1:n.158C>G
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000358136
  ensembl transcript: ENST00000369140
  gene symbol: MTMR11
  hgvsc: ENST00000369140.3:c.1074+30C>G
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000495054
  gene symbol: MTMR11
  hgvsc: ENST00000495054.1:n.333+30C>G
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000391668
  ensembl transcript: ENST00000439741
  gene symbol: MTMR11
  hgvsc: ENST00000439741.2:c.1290+30C>G
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000492824
  gene symbol: MTMR11
  hgvsc: ENST00000492824.1:n.1467-265C>G
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000482025
  gene symbol: MTMR11
  hgvsc: ENST00000482025.1:n.1517-265C>G
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000466496
  gene symbol: MTMR11
  hgvsc: ENST00000466496.1:n.611-265C>G
  variant of: http://identifiers.org/hgnc/24307
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 741
  bin: 6.75e1
  variant carriers: 584
genotype depth: GenotypeDepth
  all individuals: 1769
  bin: 4.75e1
  variant carriers: 509
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 9.25e1
  variant carriers: 168
genotype depth: GenotypeDepth
  all individuals: 12591
  bin: 3.25e1
  variant carriers: 267
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 1.25e1
  variant carriers: 26
genotype depth: GenotypeDepth
  all individuals: 1236
  bin: 5.25e1
  variant carriers: 561
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 7.5e0
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 8.75e1
  variant carriers: 209
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 7.75e1
  variant carriers: 372
genotype depth: GenotypeDepth
  all individuals: 1004
  bin: 5.75e1
  variant carriers: 570
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 743
  bin: 9.75e1
  variant carriers: 484
genotype depth: GenotypeDepth
  all individuals: 872
  bin: 6.25e1
  variant carriers: 615
genotype depth: GenotypeDepth
  all individuals: 5018
  bin: 3.75e1
  variant carriers: 357
genotype depth: GenotypeDepth
  all individuals: 21983
  bin: 2.75e1
  variant carriers: 179
genotype depth: GenotypeDepth
  all individuals: 8886
  bin: 2.25e1
  variant carriers: 137
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 8.25e1
  variant carriers: 286
genotype depth: GenotypeDepth
  all individuals: 399
  bin: 1.75e1
  variant carriers: 72
genotype depth: GenotypeDepth
  all individuals: 2778
  bin: 4.25e1
  variant carriers: 424
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 7.25e1
  variant carriers: 500
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 5.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 11053
  bin: 9.75e1
  variant carriers: 6268
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 7.5e0
  variant carriers: 1
num of homozygotes: 213
population: European (Finnish)
population: Latino
population: African
population: Other
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum

1-149903124-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 149903124
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 149903124
    reference: chr 1
allele count: 1
allele frequency: 8.265692417053776e-6
allele num: 120982
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000354941
  ensembl transcript: ENST00000361405
  gene symbol: MTMR11
  hgvsc: ENST00000361405.6:c.684-267G>A
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000495054
  gene symbol: MTMR11
  hgvsc: ENST00000495054.1:n.333+28G>A
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000490310
  gene symbol: MTMR11
  hgvsc: ENST00000490310.1:n.156G>A
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000391668
  ensembl transcript: ENST00000439741
  gene symbol: MTMR11
  hgvsc: ENST00000439741.2:c.1290+28G>A
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000466496
  gene symbol: MTMR11
  hgvsc: ENST00000466496.1:n.611-267G>A
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000482343
  gene symbol: MTMR11
  hgvsc: ENST00000482343.1:n.871-267G>A
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000358136
  ensembl transcript: ENST00000369140
  gene symbol: MTMR11
  hgvsc: ENST00000369140.3:c.1074+28G>A
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000482025
  gene symbol: MTMR11
  hgvsc: ENST00000482025.1:n.1517-267G>A
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000383948
  ensembl transcript: ENST00000406732
  gene symbol: MTMR11
  hgvsc: ENST00000406732.3:c.1040-267G>A
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000492824
  gene symbol: MTMR11
  hgvsc: ENST00000492824.1:n.1467-267G>A
  variant of: http://identifiers.org/hgnc/24307
canonical: false
consequence: non coding transcript exon
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5317
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13892
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1455
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 779
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24450
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2682
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9462
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 111
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 200
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Other
population: African
population: European (Finnish)
population: Latino
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum

1-149903127-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 149903127
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 149903127
    reference: chr 1
allele count: 6
allele frequency: 4.956711387218294e-5
allele num: 121048
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000492824
  gene symbol: MTMR11
  hgvsc: ENST00000492824.1:n.1467-270G>A
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000358136
  ensembl transcript: ENST00000369140
  gene symbol: MTMR11
  hgvsc: ENST00000369140.3:c.1074+25G>A
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000391668
  ensembl transcript: ENST00000439741
  gene symbol: MTMR11
  hgvsc: ENST00000439741.2:c.1290+25G>A
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000482343
  gene symbol: MTMR11
  hgvsc: ENST00000482343.1:n.871-270G>A
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000495054
  gene symbol: MTMR11
  hgvsc: ENST00000495054.1:n.333+25G>A
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000490310
  gene symbol: MTMR11
  hgvsc: ENST00000490310.1:n.153G>A
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000482025
  gene symbol: MTMR11
  hgvsc: ENST00000482025.1:n.1517-270G>A
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000354941
  ensembl transcript: ENST00000361405
  gene symbol: MTMR11
  hgvsc: ENST00000361405.6:c.684-270G>A
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000383948
  ensembl transcript: ENST00000406732
  gene symbol: MTMR11
  hgvsc: ENST00000406732.3:c.1040-270G>A
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000466496
  gene symbol: MTMR11
  hgvsc: ENST00000466496.1:n.611-270G>A
  variant of: http://identifiers.org/hgnc/24307
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13932
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9621
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24592
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1455
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 778
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5316
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2688
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3046
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1586
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: Other
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP

1-149903128-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 149903128
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 149903128
    reference: chr 1
allele count: 27
allele frequency: 2.229157378510923e-4
allele num: 121122
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000482025
  gene symbol: MTMR11
  hgvsc: ENST00000482025.1:n.1517-271C>T
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000383948
  ensembl transcript: ENST00000406732
  gene symbol: MTMR11
  hgvsc: ENST00000406732.3:c.1040-271C>T
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000358136
  ensembl transcript: ENST00000369140
  gene symbol: MTMR11
  hgvsc: ENST00000369140.3:c.1074+24C>T
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000490310
  gene symbol: MTMR11
  hgvsc: ENST00000490310.1:n.152C>T
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000482343
  gene symbol: MTMR11
  hgvsc: ENST00000482343.1:n.871-271C>T
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000391668
  ensembl transcript: ENST00000439741
  gene symbol: MTMR11
  hgvsc: ENST00000439741.2:c.1290+24C>T
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000466496
  gene symbol: MTMR11
  hgvsc: ENST00000466496.1:n.611-271C>T
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000495054
  gene symbol: MTMR11
  hgvsc: ENST00000495054.1:n.333+24C>T
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000354941
  ensembl transcript: ENST00000361405
  gene symbol: MTMR11
  hgvsc: ENST00000361405.6:c.684-271C>T
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000492824
  gene symbol: MTMR11
  hgvsc: ENST00000492824.1:n.1467-271C>T
  variant of: http://identifiers.org/hgnc/24307
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 775
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5317
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2681
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 9730
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 24647
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 7.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 13935
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 9.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1453
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 9313
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1580
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: South Asian
population: East Asian
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD

1-149903138-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 149903138
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 149903138
    reference: chr 1
allele count: 3
allele frequency: 2.473492406378312e-5
allele num: 121286
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000492824
  gene symbol: MTMR11
  hgvsc: ENST00000492824.1:n.1467-281G>A
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000490310
  gene symbol: MTMR11
  hgvsc: ENST00000490310.1:n.142G>A
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000391668
  ensembl transcript: ENST00000439741
  gene symbol: MTMR11
  hgvsc: ENST00000439741.2:c.1290+14G>A
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000383948
  ensembl transcript: ENST00000406732
  gene symbol: MTMR11
  hgvsc: ENST00000406732.3:c.1040-281G>A
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000482025
  gene symbol: MTMR11
  hgvsc: ENST00000482025.1:n.1517-281G>A
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000358136
  ensembl transcript: ENST00000369140
  gene symbol: MTMR11
  hgvsc: ENST00000369140.3:c.1074+14G>A
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000495054
  gene symbol: MTMR11
  hgvsc: ENST00000495054.1:n.333+14G>A
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000482343
  gene symbol: MTMR11
  hgvsc: ENST00000482343.1:n.871-281G>A
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000354941
  ensembl transcript: ENST00000361405
  gene symbol: MTMR11
  hgvsc: ENST00000361405.6:c.684-281G>A
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000466496
  gene symbol: MTMR11
  hgvsc: ENST00000466496.1:n.611-281G>A
  variant of: http://identifiers.org/hgnc/24307
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13966
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2676
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24842
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5311
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9854
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1449
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 480
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 774
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1581
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: DP

1-149903139-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 149903139
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 149903139
    reference: chr 1
allele count: 3
allele frequency: 2.473043822336532e-5
allele num: 121308
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000383948
  ensembl transcript: ENST00000406732
  gene symbol: MTMR11
  hgvsc: ENST00000406732.3:c.1040-282C>T
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000482343
  gene symbol: MTMR11
  hgvsc: ENST00000482343.1:n.871-282C>T
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000358136
  ensembl transcript: ENST00000369140
  gene symbol: MTMR11
  hgvsc: ENST00000369140.3:c.1074+13C>T
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000482025
  gene symbol: MTMR11
  hgvsc: ENST00000482025.1:n.1517-282C>T
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000354941
  ensembl transcript: ENST00000361405
  gene symbol: MTMR11
  hgvsc: ENST00000361405.6:c.684-282C>T
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000466496
  gene symbol: MTMR11
  hgvsc: ENST00000466496.1:n.611-282C>T
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000490310
  gene symbol: MTMR11
  hgvsc: ENST00000490310.1:n.141C>T
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000495054
  gene symbol: MTMR11
  hgvsc: ENST00000495054.1:n.333+13C>T
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000391668
  ensembl transcript: ENST00000439741
  gene symbol: MTMR11
  hgvsc: ENST00000439741.2:c.1290+13C>T
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000492824
  gene symbol: MTMR11
  hgvsc: ENST00000492824.1:n.1467-282C>T
  variant of: http://identifiers.org/hgnc/24307
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1447
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9867
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2676
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 770
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24856
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13971
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5310
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1580
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: African
population: Other
reference allele: G
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP

1-149903153-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 149903153
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 149903153
    reference: chr 1
allele count: 1
allele frequency: 8.239947264337508e-6
allele num: 121360
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000490310
  gene symbol: MTMR11
  hgvsc: ENST00000490310.1:n.127A>G
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000383948
  ensembl transcript: ENST00000406732
  gene symbol: MTMR11
  hgvsc: ENST00000406732.3:c.1040-296A>G
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000495054
  gene symbol: MTMR11
  hgvsc: ENST00000495054.1:n.332A>G
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000354941
  ensembl transcript: ENST00000361405
  gene symbol: MTMR11
  hgvsc: ENST00000361405.6:c.684-296A>G
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000466496
  gene symbol: MTMR11
  hgvsc: ENST00000466496.1:n.611-296A>G
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000492824
  gene symbol: MTMR11
  hgvsc: ENST00000492824.1:n.1467-296A>G
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000482025
  gene symbol: MTMR11
  hgvsc: ENST00000482025.1:n.1517-296A>G
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000358136
  ensembl transcript: ENST00000369140
  gene symbol: MTMR11
  hgvsc: ENST00000369140.3:c.1073A>G
  hgvsp: ENSP00000358136.3:p.Glu358Gly
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000391668
  ensembl transcript: ENST00000439741
  gene symbol: MTMR11
  hgvsc: ENST00000439741.2:c.1289A>G
  hgvsp: ENSP00000391668.2:p.Glu430Gly
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000482343
  gene symbol: MTMR11
  hgvsc: ENST00000482343.1:n.871-296A>G
  variant of: http://identifiers.org/hgnc/24307
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 769
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13966
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9895
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5306
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24894
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1446
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2675
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Glu430Gly
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: T
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP

1-149903153-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 149903153
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 149903153
    reference: chr 1
allele count: 1
allele frequency: 8.239947264337508e-6
allele num: 121360
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000495054
  gene symbol: MTMR11
  hgvsc: ENST00000495054.1:n.332A>C
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000383948
  ensembl transcript: ENST00000406732
  gene symbol: MTMR11
  hgvsc: ENST00000406732.3:c.1040-296A>C
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000358136
  ensembl transcript: ENST00000369140
  gene symbol: MTMR11
  hgvsc: ENST00000369140.3:c.1073A>C
  hgvsp: ENSP00000358136.3:p.Glu358Ala
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000492824
  gene symbol: MTMR11
  hgvsc: ENST00000492824.1:n.1467-296A>C
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000466496
  gene symbol: MTMR11
  hgvsc: ENST00000466496.1:n.611-296A>C
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000482343
  gene symbol: MTMR11
  hgvsc: ENST00000482343.1:n.871-296A>C
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000391668
  ensembl transcript: ENST00000439741
  gene symbol: MTMR11
  hgvsc: ENST00000439741.2:c.1289A>C
  hgvsp: ENSP00000391668.2:p.Glu430Ala
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000354941
  ensembl transcript: ENST00000361405
  gene symbol: MTMR11
  hgvsc: ENST00000361405.6:c.684-296A>C
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000482025
  gene symbol: MTMR11
  hgvsc: ENST00000482025.1:n.1517-296A>C
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000490310
  gene symbol: MTMR11
  hgvsc: ENST00000490310.1:n.127A>C
  variant of: http://identifiers.org/hgnc/24307
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 769
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5306
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2675
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24894
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9895
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1446
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13966
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Glu430Ala
num of homozygotes: 0
population: South Asian
population: Latino
population: African
population: Other
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: T
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP

1-149903169-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 149903169
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 149903169
    reference: chr 1
allele count: 2
allele frequency: 1.64774506088418e-5
allele num: 121378
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000383948
  ensembl transcript: ENST00000406732
  gene symbol: MTMR11
  hgvsc: ENST00000406732.3:c.1040-312A>T
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000391668
  ensembl transcript: ENST00000439741
  gene symbol: MTMR11
  hgvsc: ENST00000439741.2:c.1273A>T
  hgvsp: ENSP00000391668.2:p.Thr425Ser
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000358136
  ensembl transcript: ENST00000369140
  gene symbol: MTMR11
  hgvsc: ENST00000369140.3:c.1057A>T
  hgvsp: ENSP00000358136.3:p.Thr353Ser
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000466496
  gene symbol: MTMR11
  hgvsc: ENST00000466496.1:n.611-312A>T
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000495054
  gene symbol: MTMR11
  hgvsc: ENST00000495054.1:n.316A>T
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000490310
  gene symbol: MTMR11
  hgvsc: ENST00000490310.1:n.111A>T
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000354941
  ensembl transcript: ENST00000361405
  gene symbol: MTMR11
  hgvsc: ENST00000361405.6:c.684-312A>T
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000482343
  gene symbol: MTMR11
  hgvsc: ENST00000482343.1:n.871-312A>T
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000492824
  gene symbol: MTMR11
  hgvsc: ENST00000492824.1:n.1467-312A>T
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000482025
  gene symbol: MTMR11
  hgvsc: ENST00000482025.1:n.1517-312A>T
  variant of: http://identifiers.org/hgnc/24307
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13963
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9874
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24924
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2673
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1444
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5310
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 768
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33088
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Thr425Ser
num of homozygotes: 0
population: Other
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: South Asian
reference allele: T
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: QD

1-149903169-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 149903169
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 149903169
    reference: chr 1
allele count: 2
allele frequency: 1.64774506088418e-5
allele num: 121378
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000482343
  gene symbol: MTMR11
  hgvsc: ENST00000482343.1:n.871-312A>G
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000358136
  ensembl transcript: ENST00000369140
  gene symbol: MTMR11
  hgvsc: ENST00000369140.3:c.1057A>G
  hgvsp: ENSP00000358136.3:p.Thr353Ala
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000490310
  gene symbol: MTMR11
  hgvsc: ENST00000490310.1:n.111A>G
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000354941
  ensembl transcript: ENST00000361405
  gene symbol: MTMR11
  hgvsc: ENST00000361405.6:c.684-312A>G
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000492824
  gene symbol: MTMR11
  hgvsc: ENST00000492824.1:n.1467-312A>G
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000391668
  ensembl transcript: ENST00000439741
  gene symbol: MTMR11
  hgvsc: ENST00000439741.2:c.1273A>G
  hgvsp: ENSP00000391668.2:p.Thr425Ala
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000495054
  gene symbol: MTMR11
  hgvsc: ENST00000495054.1:n.316A>G
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000383948
  ensembl transcript: ENST00000406732
  gene symbol: MTMR11
  hgvsc: ENST00000406732.3:c.1040-312A>G
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000482025
  gene symbol: MTMR11
  hgvsc: ENST00000482025.1:n.1517-312A>G
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000466496
  gene symbol: MTMR11
  hgvsc: ENST00000466496.1:n.611-312A>G
  variant of: http://identifiers.org/hgnc/24307
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9874
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1444
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13963
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24924
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2673
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5310
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 768
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1581
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Thr425Ala
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: Other
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: T
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD

1-149903177-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 149903177
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 149903177
    reference: chr 1
allele count: 1
allele frequency: 8.238046594391538e-6
allele num: 121388
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000383948
  ensembl transcript: ENST00000406732
  gene symbol: MTMR11
  hgvsc: ENST00000406732.3:c.1040-320T>C
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000358136
  ensembl transcript: ENST00000369140
  gene symbol: MTMR11
  hgvsc: ENST00000369140.3:c.1049T>C
  hgvsp: ENSP00000358136.3:p.Leu350Pro
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000391668
  ensembl transcript: ENST00000439741
  gene symbol: MTMR11
  hgvsc: ENST00000439741.2:c.1265T>C
  hgvsp: ENSP00000391668.2:p.Leu422Pro
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000495054
  gene symbol: MTMR11
  hgvsc: ENST00000495054.1:n.308T>C
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000490310
  gene symbol: MTMR11
  hgvsc: ENST00000490310.1:n.103T>C
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000492824
  gene symbol: MTMR11
  hgvsc: ENST00000492824.1:n.1467-320T>C
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000354941
  ensembl transcript: ENST00000361405
  gene symbol: MTMR11
  hgvsc: ENST00000361405.6:c.684-320T>C
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000482025
  gene symbol: MTMR11
  hgvsc: ENST00000482025.1:n.1517-320T>C
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000466496
  gene symbol: MTMR11
  hgvsc: ENST00000466496.1:n.611-320T>C
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000482343
  gene symbol: MTMR11
  hgvsc: ENST00000482343.1:n.871-320T>C
  variant of: http://identifiers.org/hgnc/24307
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1446
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 762
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 476
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5306
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9867
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24951
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2671
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13970
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5460
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Leu422Pro
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: African
population: Latino
population: East Asian
population: South Asian
reference allele: A
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum

1-149903179-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 149903179
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 149903179
    reference: chr 1
allele count: 2
allele frequency: 1.647609318878308e-5
allele num: 121388
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000492824
  gene symbol: MTMR11
  hgvsc: ENST00000492824.1:n.1467-322G>A
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000354941
  ensembl transcript: ENST00000361405
  gene symbol: MTMR11
  hgvsc: ENST00000361405.6:c.684-322G>A
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000490310
  gene symbol: MTMR11
  hgvsc: ENST00000490310.1:n.101G>A
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000482343
  gene symbol: MTMR11
  hgvsc: ENST00000482343.1:n.871-322G>A
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000466496
  gene symbol: MTMR11
  hgvsc: ENST00000466496.1:n.611-322G>A
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000482025
  gene symbol: MTMR11
  hgvsc: ENST00000482025.1:n.1517-322G>A
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000358136
  ensembl transcript: ENST00000369140
  gene symbol: MTMR11
  hgvsc: ENST00000369140.3:c.1047G>A
  hgvsp: ENST00000369140.3:c.1047G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000391668
  ensembl transcript: ENST00000439741
  gene symbol: MTMR11
  hgvsc: ENST00000439741.2:c.1263G>A
  hgvsp: ENST00000439741.2:c.1263G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000495054
  gene symbol: MTMR11
  hgvsc: ENST00000495054.1:n.306G>A
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000383948
  ensembl transcript: ENST00000406732
  gene symbol: MTMR11
  hgvsc: ENST00000406732.3:c.1040-322G>A
  variant of: http://identifiers.org/hgnc/24307
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 762
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 476
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5306
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24946
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2669
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9874
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1447
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13971
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1207
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Arg421Arg
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: Other
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: MQ

1-149903180-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 149903180
    reference: chr 1
  end: Position
    type: ExactPosition
    position: 149903180
    reference: chr 1
allele count: 4
allele frequency: 3.295218637756615e-5
allele num: 121388
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000482343
  gene symbol: MTMR11
  hgvsc: ENST00000482343.1:n.871-323G>A
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000391668
  ensembl transcript: ENST00000439741
  gene symbol: MTMR11
  hgvsc: ENST00000439741.2:c.1262G>A
  hgvsp: ENSP00000391668.2:p.Arg421Gln
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000358136
  ensembl transcript: ENST00000369140
  gene symbol: MTMR11
  hgvsc: ENST00000369140.3:c.1046G>A
  hgvsp: ENSP00000358136.3:p.Arg349Gln
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000495054
  gene symbol: MTMR11
  hgvsc: ENST00000495054.1:n.305G>A
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000490310
  gene symbol: MTMR11
  hgvsc: ENST00000490310.1:n.100G>A
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000482025
  gene symbol: MTMR11
  hgvsc: ENST00000482025.1:n.1517-323G>A
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000354941
  ensembl transcript: ENST00000361405
  gene symbol: MTMR11
  hgvsc: ENST00000361405.6:c.684-323G>A
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl protein: ENSP00000383948
  ensembl transcript: ENST00000406732
  gene symbol: MTMR11
  hgvsc: ENST00000406732.3:c.1040-323G>A
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000492824
  gene symbol: MTMR11
  hgvsc: ENST00000492824.1:n.1467-323G>A
  variant of: http://identifiers.org/hgnc/24307
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000014914
  ensembl transcript: ENST00000466496
  gene symbol: MTMR11
  hgvsc: ENST00000466496.1:n.611-323G>A
  variant of: http://identifiers.org/hgnc/24307
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13974
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1446
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 476
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24948
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9871
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2668
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 761
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 8.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 5305
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Arg421Gln
num of homozygotes: 0
reference allele: C

GenotypeQuality
all individuals: 184
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5913
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 136
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 183
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44256
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 521
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 227
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1403
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1051
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 192
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 590
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3660
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1055
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 462
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 118
bin: 5.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.655926995064718e-5
allele num: 64434
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11866
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8580
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.854158454867954e-5
allele num: 10148
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11380
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 824
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.73e-1

FS
type: SiteQuality
SIO_000300: 5.639999999999999e-1

QD
type: SiteQuality
SIO_000300: 1.525e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.7e-3

MQ
type: SiteQuality
SIO_000300: 5.944e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.6e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.31e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.66e0

DP
type: SiteQuality
SIO_000300: 1.476806e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.42e-1

GenotypeQuality
all individuals: 56
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 127
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3483
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 188
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 169
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 351
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 209
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1414
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 194
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 485
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 464
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 185
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 539
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44449
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 184
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1060
bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12120
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 828
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8588
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.966181675186787e-4
allele num: 10172
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64590
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11400
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 4.06e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.71e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.2e-3

MQRankSum
type: SiteQuality
SIO_000300: -3.37e-1

DP
type: SiteQuality
SIO_000300: 1.481139e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.16e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.95e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.4e0

QD
type: SiteQuality
SIO_000300: 1.492e1

GenotypeQuality
all individuals: 3483
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 188
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 83
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5960
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 184
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 169
bin: 4.75e1
variant carriers: 1

GenotypeQuality
all individuals: 485
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1414
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 209
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 351
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1047
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 539
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 185
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44449
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 464
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10172
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64590
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8588
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 2.631578947368421e-4
allele num: 11400
num of homozygotes: 1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12120
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 828
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.481139e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.2e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 1.16e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 3.71e-1

QD
type: SiteQuality
SIO_000300: 1.492e1

FS
type: SiteQuality
SIO_000300: 4.06e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.37e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.95e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.4e0

GenotypeQuality
all individuals: 313
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 78
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 160
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6000
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 487
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1412
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 185
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 211
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1046
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1068
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 466
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 45032
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 212
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3018
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 183
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.541972491210757e-5
allele num: 64852
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11428
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12778
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 838
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10196
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.19e0

QD
type: SiteQuality
SIO_000300: 1.174e1

MQ
type: SiteQuality
SIO_000300: 5.909e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.974e0

MQRankSum
type: SiteQuality
SIO_000300: 7.19e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 5.4e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.44e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-3

DP
type: SiteQuality
SIO_000300: 1.491582e6

GenotypeQuality
all individuals: 2930
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 466
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 433
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 184
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 196
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6010
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1051
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 29
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 229
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 141
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1070
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 480
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 312
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1417
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 244
bin: 5.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11430
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10204
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12978
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 846
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.161049842893228e-5
allele num: 64924
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -4.0e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -3.37e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.35e-1

QD
type: SiteQuality
SIO_000300: 1.22e1

VQSLOD
type: SiteQuality
SIO_000300: 8.05e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.5e-3

FS
type: SiteQuality
SIO_000300: 1.107e0

BaseQRankSum
type: SiteQuality
SIO_000300: -6.6e-1

MQ
type: SiteQuality
SIO_000300: 5.94e1

DP
type: SiteQuality
SIO_000300: 1.493808e6

GenotypeQuality
all individuals: 183
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 432
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 257
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 147
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 148
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 490
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2838
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 466
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1051
bin: 9.75e1
variant carriers: 6

GenotypeQuality
all individuals: 1418
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 226
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 153
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1070
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 184
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6006
bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64952
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 842
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 2.624212736179146e-4
allele num: 11432
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.792401096748923e-5
allele num: 10212
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13048
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.321801718133271e-4
allele num: 8614
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.137e0

QD
type: SiteQuality
SIO_000300: 1.272e1

FS
type: SiteQuality
SIO_000300: 5.28e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.19e0

MQ
type: SiteQuality
SIO_000300: 5.911e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.35e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.5e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.26e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.3e-3

DP
type: SiteQuality
SIO_000300: 1.496559e6

GenotypeQuality
all individuals: 191
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 105
bin: 7.5e0
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GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
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bin: 8.25e1
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GenotypeQuality
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bin: 1.75e1
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GenotypeQuality
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bin: 6.25e1
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GenotypeQuality
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bin: 7.75e1
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GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 1.25e1
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10230
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.196315486470927e-5
allele num: 13896
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 864
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11454
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65280
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.075e0

QD
type: SiteQuality
SIO_000300: 8.779999999999999e0

BaseQRankSum
type: SiteQuality
SIO_000300: 9.91e-1

VQSLOD
type: SiteQuality
SIO_000300: -3.734e-1

MQRankSum
type: SiteQuality
SIO_000300: 8.01e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.2e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 2.471e0

DP
type: SiteQuality
SIO_000300: 1.507698e6

ClippingRankSum
type: SiteQuality
SIO_000300: 9.28e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 4
allele frequency: 6.049606775559589e-4
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11464
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 870
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.53003457878148e-5
allele num: 65358
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10240
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14176
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.645e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.24e-1

FS
type: SiteQuality
SIO_000300: 1.9653e1

MQRankSum
type: SiteQuality
SIO_000300: 3.28e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.649e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.03e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.03e-1

DP
type: SiteQuality
SIO_000300: 1.511967e6

GenotypeQuality
all individuals: 18
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14294
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.529051987767584e-5
allele num: 65400
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11464
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10238
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -1.754e0

MQ
type: SiteQuality
SIO_000300: 5.819e1

MQRankSum
type: SiteQuality
SIO_000300: -3.36e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.304e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.39e-1

QD
type: SiteQuality
SIO_000300: 1.396e1

DP
type: SiteQuality
SIO_000300: 1.513664e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.1e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.62e-1

GenotypeQuality
all individuals: 74
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 6.25e1
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GenotypeQuality
all individuals: 1432
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10236
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8628
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.955070246209486e-5
allele num: 14378
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11464
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65478
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.515351e6

VQSLOD
type: SiteQuality
SIO_000300: 7.45e-1

QD
type: SiteQuality
SIO_000300: 1.104e1

MQ
type: SiteQuality
SIO_000300: 5.973e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.418e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.4e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.76e-1

MQRankSum
type: SiteQuality
SIO_000300: -6.79e-1

FS
type: SiteQuality
SIO_000300: 3.066e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.2e-3

GenotypeQuality
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bin: 9.75e1
variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 248
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GenotypeQuality
all individuals: 46657
bin: 6.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.05446104034943e-5
allele num: 65478
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8628
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11464
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10236
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14378
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.76e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.418e0

MQ
type: SiteQuality
SIO_000300: 5.973e1

FS
type: SiteQuality
SIO_000300: 3.066e0

VQSLOD
type: SiteQuality
SIO_000300: 7.45e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.4e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.2e-3

MQRankSum
type: SiteQuality
SIO_000300: -6.79e-1

QD
type: SiteQuality
SIO_000300: 1.104e1

DP
type: SiteQuality
SIO_000300: 1.515351e6

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 318
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10236
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65478
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.159017153453871e-4
allele num: 8628
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14378
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11464
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.418e0

QD
type: SiteQuality
SIO_000300: 1.104e1

VQSLOD
type: SiteQuality
SIO_000300: 7.45e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.2e-3

MQ
type: SiteQuality
SIO_000300: 5.973e1

MQRankSum
type: SiteQuality
SIO_000300: -6.79e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.4e-1

FS
type: SiteQuality
SIO_000300: 3.066e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.76e-1

DP
type: SiteQuality
SIO_000300: 1.515351e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10238
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.525599560627327e-5
allele num: 65548
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11472
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

South Asian
type: Population
allele count: 4
allele frequency: 2.74649821477616e-4
allele num: 14564
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 1.83e-1

FS
type: SiteQuality
SIO_000300: 6.11e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.78e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.17e0

DP
type: SiteQuality
SIO_000300: 1.517681e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -2.457e0

QD
type: SiteQuality
SIO_000300: 1.076e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.29e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 216
bin: 5.25e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.159823706796567e-4
allele num: 8622
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11474
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14648
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10238
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.5253668507276e-5
allele num: 65558
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.518785e6

FS
type: SiteQuality
SIO_000300: 1.2088e1

QD
type: SiteQuality
SIO_000300: 1.004e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.1e-3

MQRankSum
type: SiteQuality
SIO_000300: 3.04e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.698e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.29e-1

VQSLOD
type: SiteQuality
SIO_000300: -6.757e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.76e-1

MQ
type: SiteQuality
SIO_000300: 5.957e1

GenotypeQuality
all individuals: 1043
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 101
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 177
bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1106
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 276
bin: 3.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.522904483430799e-5
allele num: 65664
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10244
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14880
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11480
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.588e-1

MQRankSum
type: SiteQuality
SIO_000300: -5.5e-2

FS
type: SiteQuality
SIO_000300: 6.543e0

DP
type: SiteQuality
SIO_000300: 1.522304e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.01e-1

MQ
type: SiteQuality
SIO_000300: 5.97e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.48e0

QD
type: SiteQuality
SIO_000300: 1.628e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.83e0

GenotypeQuality
all individuals: 9
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 6.25e1
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 150
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 182
bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11480
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10244
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.521606816798539e-5
allele num: 65720
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15070
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.065e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.32e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 3.97e-1

MQ
type: SiteQuality
SIO_000300: 5.924e1

DP
type: SiteQuality
SIO_000300: 1.525435e6

QD
type: SiteQuality
SIO_000300: 1.046e1

VQSLOD
type: SiteQuality
SIO_000300: 2.75e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.590000000000001e-1

GenotypeQuality
all individuals: 174
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 1.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 2

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 210
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 459
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11474
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8618
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65986
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10224
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.255020080321285e-4
allele num: 15936
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 8.799999999999999e-2

FS
type: SiteQuality
SIO_000300: 7.09e-1

QD
type: SiteQuality
SIO_000300: 1.12e1

MQ
type: SiteQuality
SIO_000300: 5.954e1

VQSLOD
type: SiteQuality
SIO_000300: 4.88e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.66e-1

DP
type: SiteQuality
SIO_000300: 1.537008e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.32e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.14e0

GenotypeQuality
all individuals: 1085
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 183
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 204
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
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variant carriers: 0

GenotypeQuality
all individuals: 1014
bin: 2.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 179
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variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1037
bin: 9.75e1
variant carriers: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8618
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16036
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.514325519413653e-5
allele num: 66036
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10222
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11476
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.09e1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.14e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.945e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.3e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -7.84e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.97e-1

DP
type: SiteQuality
SIO_000300: 1.538743e6

VQSLOD
type: SiteQuality
SIO_000300: 1.03e0

GenotypeQuality
all individuals: 108
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 193
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1025
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 26
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GenotypeQuality
all individuals: 113
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GenotypeQuality
all individuals: 136
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 8
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 182
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GenotypeQuality
all individuals: 170
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GenotypeQuality
all individuals: 1080
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GenotypeQuality
all individuals: 454
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GenotypeQuality
all individuals: 16
bin: 1.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10202
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8610
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11464
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16112
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.028742768876639e-5
allele num: 66034
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

MQ
type: SiteQuality
SIO_000300: 5.919e1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.538835e6

QD
type: SiteQuality
SIO_000300: 1.365e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.53e-1

MQRankSum
type: SiteQuality
SIO_000300: -9.2e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 3.62e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.33e0

VQSLOD
type: SiteQuality
SIO_000300: 1.3e0

GenotypeQuality
all individuals: 265
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1041
bin: 9.75e1
variant carriers: 4

GenotypeQuality
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bin: 5.75e1
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GenotypeQuality
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GenotypeQuality
all individuals: 262
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 4
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1414
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GenotypeQuality
all individuals: 140
bin: 4.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16152
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.16333178222429e-4
allele num: 8596
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10166
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.747640685075148e-4
allele num: 11444
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.5148760831364e-5
allele num: 66012
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.536342e6

FS
type: SiteQuality
SIO_000300: 1.954e0

MQRankSum
type: SiteQuality
SIO_000300: 1.19e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

VQSLOD
type: SiteQuality
SIO_000300: -7.711e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.191e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.7e0

QD
type: SiteQuality
SIO_000300: 1.846e1

MQ
type: SiteQuality
SIO_000300: 5.963e1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.9e-2

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 143
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 11
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
all individuals: 193
bin: 4.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8594
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16162
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11444
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66014
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.83671060397403e-5
allele num: 10166
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.54e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.11e0

MQ
type: SiteQuality
SIO_000300: 5.965e1

FS
type: SiteQuality
SIO_000300: 2.393e0

QD
type: SiteQuality
SIO_000300: 1.39e1

DP
type: SiteQuality
SIO_000300: 1.536823e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

MQRankSum
type: SiteQuality
SIO_000300: -3.3e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.157e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.544e0

GenotypeQuality
all individuals: 389
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variant carriers: 0

GenotypeQuality
all individuals: 1392
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 24
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
all individuals: 46799
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GenotypeQuality
all individuals: 1034
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11424
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65914
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10128
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8560
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.237623762376238e-4
allele num: 16160
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.49e-1

QD
type: SiteQuality
SIO_000300: 1.334e1

VQSLOD
type: SiteQuality
SIO_000300: -1.487e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

FS
type: SiteQuality
SIO_000300: 1.1117e1

MQRankSum
type: SiteQuality
SIO_000300: -7.04e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -8.01e-1

MQ
type: SiteQuality
SIO_000300: 5.911e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.04e-1

DP
type: SiteQuality
SIO_000300: 1.531631e6

GenotypeQuality
all individuals: 228
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 344
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 351
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 347
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 169
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 109
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 343
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1359
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1031
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 362
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 181
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5995
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1039
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 1388
bin: 7.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8562
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10130
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 2.626970227670753e-4
allele num: 11420
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16168
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.517220452131695e-5
allele num: 65910
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.78e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.93e-1

DP
type: SiteQuality
SIO_000300: 1.531787e6

MQ
type: SiteQuality
SIO_000300: 5.981e1

FS
type: SiteQuality
SIO_000300: 1.258e0

QD
type: SiteQuality
SIO_000300: 1.569e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.28e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 2.79e0

VQSLOD
type: SiteQuality
SIO_000300: 2.36e0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 169
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 433
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 489
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5897
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variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 411
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 179
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 168
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1016
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1365
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46487
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variant carriers: 0

GenotypeQuality
all individuals: 420
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 384
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 267
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1036
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 441
bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8550
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10100
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16172
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11420
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.51846452866861e-5
allele num: 65856
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.570000000000001e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

QD
type: SiteQuality
SIO_000300: 1.134e1

VQSLOD
type: SiteQuality
SIO_000300: 8.98e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.000000000000001e-2

FS
type: SiteQuality
SIO_000300: 3.154e0

MQRankSum
type: SiteQuality
SIO_000300: 7.05e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.45e-1

DP
type: SiteQuality
SIO_000300: 1.52857e6

GenotypeQuality
all individuals: 556
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 45337
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 347
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1349
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 588
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variant carriers: 0

GenotypeQuality
all individuals: 28
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variant carriers: 0

GenotypeQuality
all individuals: 5784
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1722
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variant carriers: 0

GenotypeQuality
all individuals: 527
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 445
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 179
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 168
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1036
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 998
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 662
bin: 5.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10064
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11396
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.238543472875898e-4
allele num: 16148
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8518
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6582
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65724
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

QD
type: SiteQuality
SIO_000300: 1.152e1

FS
type: SiteQuality
SIO_000300: 2.651e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.57e-1

MQRankSum
type: SiteQuality
SIO_000300: -7.36e-1

DP
type: SiteQuality
SIO_000300: 1.522509e6

MQ
type: SiteQuality
SIO_000300: 5.968e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.77e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.46e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.67e-1

GenotypeQuality
all individuals: 527
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 434
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 445
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variant carriers: 0

GenotypeQuality
all individuals: 168
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variant carriers: 0

GenotypeQuality
all individuals: 179
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variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 492
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variant carriers: 0

GenotypeQuality
all individuals: 998
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 662
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 556
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variant carriers: 0

GenotypeQuality
all individuals: 45337
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1349
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 347
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1036
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 5784
bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.52151421094273e-5
allele num: 65724
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6582
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10064
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11396
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16148
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8518
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.968e1

FS
type: SiteQuality
SIO_000300: 2.651e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.77e-1

MQRankSum
type: SiteQuality
SIO_000300: -7.36e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 1.67e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.46e-1

DP
type: SiteQuality
SIO_000300: 1.522509e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.57e-1

QD
type: SiteQuality
SIO_000300: 1.152e1

GenotypeQuality
all individuals: 1857
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 45406
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variant carriers: 0

GenotypeQuality
all individuals: 177
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variant carriers: 0

GenotypeQuality
all individuals: 168
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variant carriers: 0

GenotypeQuality
all individuals: 372
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variant carriers: 0

GenotypeQuality
all individuals: 650
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variant carriers: 0

GenotypeQuality
all individuals: 585
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variant carriers: 0

GenotypeQuality
all individuals: 480
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GenotypeQuality
all individuals: 5736
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variant carriers: 0

GenotypeQuality
all individuals: 527
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variant carriers: 0

GenotypeQuality
all individuals: 989
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 209
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GenotypeQuality
all individuals: 1033
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1338
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 1.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6574
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65652
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16142
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8496
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.790436005625879e-5
allele num: 11376
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10046
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -3.167e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.17e-1

QD
type: SiteQuality
SIO_000300: 1.077e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.302e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

FS
type: SiteQuality
SIO_000300: 5.036e0

DP
type: SiteQuality
SIO_000300: 1.518825e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.98e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.98e-1

MQ
type: SiteQuality
SIO_000300: 5.899e1

GenotypeQuality
all individuals: 503
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 422
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 417
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 177
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variant carriers: 0

GenotypeQuality
all individuals: 5634
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variant carriers: 0

GenotypeQuality
all individuals: 618
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variant carriers: 0

GenotypeQuality
all individuals: 56
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variant carriers: 0

GenotypeQuality
all individuals: 1033
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 10
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variant carriers: 0

GenotypeQuality
all individuals: 1334
bin: 7.25e1
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GenotypeQuality
all individuals: 808
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variant carriers: 0

GenotypeQuality
all individuals: 25
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variant carriers: 0

GenotypeQuality
all individuals: 39
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variant carriers: 0

GenotypeQuality
all individuals: 980
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GenotypeQuality
all individuals: 44178
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variant carriers: 0

GenotypeQuality
all individuals: 1045
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 570
bin: 3.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65568
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6570
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10024
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.180916391119509e-4
allele num: 8468
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16112
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11358
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.953e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.776e0

FS
type: SiteQuality
SIO_000300: 1.871e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.78e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.4e-1

MQRankSum
type: SiteQuality
SIO_000300: 9.45e-1

DP
type: SiteQuality
SIO_000300: 1.516521e6

MQ
type: SiteQuality
SIO_000300: 5.747e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

QD
type: SiteQuality
SIO_000300: 1.137e1

GenotypeQuality
all individuals: 970
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 991
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5489
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 165
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 561
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2216
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 670
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 441
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 841
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 423
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 616
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1036
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 1311
bin: 7.25e1
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GenotypeQuality
all individuals: 178
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 411
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44249
bin: 6.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16090
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9980
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6558
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.763979537837361e-4
allele num: 11338
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.528771479239283e-5
allele num: 65412
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8432
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

FS
type: SiteQuality
SIO_000300: 3.462e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.63e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.03e0

DP
type: SiteQuality
SIO_000300: 1.509564e6

MQRankSum
type: SiteQuality
SIO_000300: 1.86e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.11e-1

QD
type: SiteQuality
SIO_000300: 1.347e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.46e-1

GenotypeQuality
all individuals: 991
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 178
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 970
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 670
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2216
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1311
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 441
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
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variant carriers: 0

GenotypeQuality
all individuals: 561
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 423
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 616
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 411
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GenotypeQuality
all individuals: 165
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 841
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5489
bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9980
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65412
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8432
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11338
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6558
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.864512119328776e-4
allele num: 16090
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.11e-1

FS
type: SiteQuality
SIO_000300: 3.462e0

MQRankSum
type: SiteQuality
SIO_000300: 1.86e-1

QD
type: SiteQuality
SIO_000300: 1.347e1

DP
type: SiteQuality
SIO_000300: 1.509564e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.46e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.03e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.63e-1

GenotypeQuality
all individuals: 965
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 628
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 399
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2369
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 648
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5494
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 418
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 165
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9964
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16068
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11328
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65362
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.187366421277606e-4
allele num: 8422
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6560
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.463e0

VQSLOD
type: SiteQuality
SIO_000300: 8.44e-1

DP
type: SiteQuality
SIO_000300: 1.505779e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.2e-3

MQRankSum
type: SiteQuality
SIO_000300: 9.27e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.05e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.23e-1

MQ
type: SiteQuality
SIO_000300: 5.938e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.297e0

QD
type: SiteQuality
SIO_000300: 1.136e1

GenotypeQuality
all individuals: 2522
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 427
bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 445
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 413
bin: 8.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16034
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8404
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6552
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11300
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65202
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 3.01568154402895e-4
allele num: 9948
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.78e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.9e-3

QD
type: SiteQuality
SIO_000300: 1.251e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.83e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.7e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -2.185e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 5.961e0

DP
type: SiteQuality
SIO_000300: 1.502852e6

ClippingRankSum
type: SiteQuality
SIO_000300: -4.21e-1

GenotypeQuality
all individuals: 29
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 643
bin: 3.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44277
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 764
bin: 5.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6552
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9948
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.533695285420693e-5
allele num: 65202
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8404
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11300
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16034
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.961e0

QD
type: SiteQuality
SIO_000300: 1.251e1

MQRankSum
type: SiteQuality
SIO_000300: 1.7e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.21e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.78e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.9e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -2.185e0

DP
type: SiteQuality
SIO_000300: 1.502852e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.83e-1

GenotypeQuality
all individuals: 112
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 899
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variant carriers: 0

GenotypeQuality
all individuals: 925
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variant carriers: 0

GenotypeQuality
all individuals: 5046
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1075
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variant carriers: 0

GenotypeQuality
all individuals: 1026
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variant carriers: 1

GenotypeQuality
all individuals: 732
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 85
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38
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variant carriers: 0

GenotypeQuality
all individuals: 169
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variant carriers: 0

GenotypeQuality
all individuals: 528
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 395
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9882
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11250
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64790
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.289308176100629e-5
allele num: 15900
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8366
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6522
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.29e-1

QD
type: SiteQuality
SIO_000300: 1.99e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.9e-1

DP
type: SiteQuality
SIO_000300: 1.48965e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -8.500000000000001e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -1.417e0

VQSLOD
type: SiteQuality
SIO_000300: -2.09e0

GenotypeQuality
all individuals: 415
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 658
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 106
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 702
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variant carriers: 0

GenotypeQuality
all individuals: 3142
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 806
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variant carriers: 0

GenotypeQuality
all individuals: 895
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variant carriers: 0

GenotypeQuality
all individuals: 50
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variant carriers: 0

GenotypeQuality
all individuals: 156
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 28
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variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 167
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GenotypeQuality
all individuals: 1023
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 5050
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variant carriers: 0

GenotypeQuality
all individuals: 1177
bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8370
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15894
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6522
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11240
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.543162248078763e-5
allele num: 64802
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9890
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.59e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.56e1

FS
type: SiteQuality
SIO_000300: 2.879e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.65e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 2.43e-1

DP
type: SiteQuality
SIO_000300: 1.488185e6

MQRankSum
type: SiteQuality
SIO_000300: 9.71e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.98e-1

GenotypeQuality
all individuals: 109
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1028
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 154
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variant carriers: 0

GenotypeQuality
all individuals: 22
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variant carriers: 0

GenotypeQuality
all individuals: 1111
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 410
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variant carriers: 0

GenotypeQuality
all individuals: 4901
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 5

GenotypeQuality
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GenotypeQuality
all individuals: 3643
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variant carriers: 0

GenotypeQuality
all individuals: 389
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 2
allele frequency: 2.03210729526519e-4
allele num: 9842
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11190
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.652605459057072e-5
allele num: 64480
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15730
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6502
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8340
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 4.51e-1

DP
type: SiteQuality
SIO_000300: 1.478846e6

MQRankSum
type: SiteQuality
SIO_000300: 3.58e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

FS
type: SiteQuality
SIO_000300: 4.096e0

QD
type: SiteQuality
SIO_000300: 1.294e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.122e0

MQ
type: SiteQuality
SIO_000300: 5.884e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.29e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.1e-2

GenotypeQuality
all individuals: 805
bin: 5.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 132
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
all individuals: 380
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6492
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15604
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11172
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.556517137253681e-5
allele num: 64246
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9804
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8332
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.878e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.49e-1

VQSLOD
type: SiteQuality
SIO_000300: -9.660000000000001e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.31e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.102e0

DP
type: SiteQuality
SIO_000300: 1.470249e6

MQRankSum
type: SiteQuality
SIO_000300: 1.22e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

QD
type: SiteQuality
SIO_000300: 1.087e1

GenotypeQuality
all individuals: 552
bin: 4.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 327
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GenotypeQuality
all individuals: 4511
bin: 2.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9756
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6480
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8294
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 876
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64022
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.471654154801968e-5
allele num: 15452
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11138
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -2.092e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.75e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.945e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -1.71e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.44e-1

MQ
type: SiteQuality
SIO_000300: 5.895e1

DP
type: SiteQuality
SIO_000300: 1.462839e6

QD
type: SiteQuality
SIO_000300: 1.298e1

GenotypeQuality
all individuals: 644
bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
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GenotypeQuality
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bin: 4.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 852
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8128
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6418
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9484
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.954102920723227e-5
allele num: 14380
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62330
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10904
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.429e0

MQRankSum
type: SiteQuality
SIO_000300: -1.23e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.29e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.1e-2

DP
type: SiteQuality
SIO_000300: 1.398487e6

FS
type: SiteQuality
SIO_000300: 2.785e0

QD
type: SiteQuality
SIO_000300: 9.720000000000001e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.3e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 8.57e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6418
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8128
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10904
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9484
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14380
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 852
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.604363869725654e-5
allele num: 62330
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -1.23e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.57e-1

QD
type: SiteQuality
SIO_000300: 9.720000000000001e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.429e0

VQSLOD
type: SiteQuality
SIO_000300: 2.29e0

FS
type: SiteQuality
SIO_000300: 2.785e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.3e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.1e-2

DP
type: SiteQuality
SIO_000300: 1.398487e6

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 826
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10604
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13384
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.09217999126256e-4
allele num: 9156
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 60340
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6312
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7942
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.311999e6

VQSLOD
type: SiteQuality
SIO_000300: -2.511e-1

QD
type: SiteQuality
SIO_000300: 8.56e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.892e0

MQRankSum
type: SiteQuality
SIO_000300: 4.15e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

FS
type: SiteQuality
SIO_000300: 2.079e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.92e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.87e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 21

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 818
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13028
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.360779700890607e-5
allele num: 59510
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10460
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7862
num of homozygotes: 0

African
type: Population
allele count: 20
allele frequency: 2.216312056737589e-3
allele num: 9024
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6272
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.099999999999999e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.41e0

VQSLOD
type: SiteQuality
SIO_000300: 1.97e0

DP
type: SiteQuality
SIO_000300: 1.278289e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.7e-3

FS
type: SiteQuality
SIO_000300: 4.683e0

MQRankSum
type: SiteQuality
SIO_000300: 2.39e-1

QD
type: SiteQuality
SIO_000300: 1.029e1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.13e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 10

South Asian
type: Population
allele count: 1
allele frequency: 7.750736319950395e-5
allele num: 12902
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6258
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 9
allele frequency: 1.518731015862302e-4
allele num: 59260
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8986
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10412
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7822
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.956e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.6e-3

ReadPosRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.01e-1

QD
type: SiteQuality
SIO_000300: 1.389e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.37e-1

VQSLOD
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: -3.4e-2

DP
type: SiteQuality
SIO_000300: 1.26598e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8858
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10296
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 58494
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7710
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.960515841426525e-5
allele num: 12562
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6226
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 808
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.224431e6

BaseQRankSum
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SIO_000300: -1.04e0

MQRankSum
type: SiteQuality
SIO_000300: -7.54e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.51e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.6e-3

MQ
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 2.94e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.51e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.955e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 2

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.488453219842322e-5
allele num: 57332
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10052
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8690
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6164
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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ClippingRankSum
type: SiteQuality
SIO_000300: 1.96e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.9e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.77e0

DP
type: SiteQuality
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VQSLOD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 1.0165e1

MQRankSum
type: SiteQuality
SIO_000300: 1.02e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.69e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.641e1

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 617
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variant carriers: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.693480101608806e-4
allele num: 11810
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
type: Population
allele count: 136
allele frequency: 1.370691392864342e-2
allele num: 9922
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.770412860279017e-5
allele num: 56484
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
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BaseQRankSum
type: SiteQuality
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InbreedingCoeff
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MQRankSum
type: SiteQuality
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MQ
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 6.860000000000001e-1

QD
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SIO_000300: 1.242e1

VQSLOD
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ReadPosRankSum
type: SiteQuality
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DP
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SIO_000300: 1.100234e6

ClippingRankSum
type: SiteQuality
SIO_000300: -3.18e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 54494
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele num: 8330
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

DP
type: SiteQuality
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ReadPosRankSum
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FS
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MQRankSum
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VQSLOD
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BaseQRankSum
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QD
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InbreedingCoeff
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SIO_000300: -5.4e-3

MQ
type: SiteQuality
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
allele num: 9450
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African
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allele frequency: 1.204529029149603e-4
allele num: 8302
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East Asian
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South Asian
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BaseQRankSum
type: SiteQuality
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ClippingRankSum
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FS
type: SiteQuality
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InbreedingCoeff
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MQ
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VQSLOD
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MQRankSum
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ReadPosRankSum
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QD
type: SiteQuality
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DP
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele frequency: 0.0e0
allele num: 9060
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.916663472227546e-5
allele num: 52174
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.3e-2

MQRankSum
type: SiteQuality
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InbreedingCoeff
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QD
type: SiteQuality
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BaseQRankSum
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FS
type: SiteQuality
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MQ
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: 4.8e-1

DP
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 3.86e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 6706
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 9514
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.947192148921256e-5
allele num: 51356
num of homozygotes: 0

Other
type: Population
allele count: 0
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num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.67e0

MQ
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 5.304e0

MQRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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QD
type: SiteQuality
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.05279796362442e-5
allele num: 48714
num of homozygotes: 0

Other
type: Population
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African
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Latino
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European (Finnish)
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allele frequency: 0.0e0
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South Asian
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East Asian
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allele frequency: 0.0e0
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FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
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MQRankSum
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VQSLOD
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DP
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InbreedingCoeff
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QD
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ClippingRankSum
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BaseQRankSum
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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African
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South Asian
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Other
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European (Non-Finnish)
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allele frequency: 0.0e0
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ReadPosRankSum
type: SiteQuality
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DP
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FS
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MQRankSum
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QD
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BaseQRankSum
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InbreedingCoeff
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ClippingRankSum
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VQSLOD
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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European (Non-Finnish)
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South Asian
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African
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East Asian
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Latino
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Other
type: Population
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FS
type: SiteQuality
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InbreedingCoeff
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DP
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ClippingRankSum
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ReadPosRankSum
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MQRankSum
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BaseQRankSum
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VQSLOD
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QD
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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East Asian
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South Asian
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European (Finnish)
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Other
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Latino
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European (Non-Finnish)
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QD
type: SiteQuality
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ReadPosRankSum
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MQ
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ClippingRankSum
type: SiteQuality
SIO_000300: -1.046e0

VQSLOD
type: SiteQuality
SIO_000300: 1.91e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.3e-3

FS
type: SiteQuality
SIO_000300: 5.204e0

MQRankSum
type: SiteQuality
SIO_000300: -1.086e0

DP
type: SiteQuality
SIO_000300: 1.940524e6

BaseQRankSum
type: SiteQuality
SIO_000300: 7.09e-1

GenotypeQuality
all individuals: 105
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 429
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 249
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 331
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 156
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 389
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1740
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2881
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 230
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9029
bin: 9.75e1
variant carriers: 6

GenotypeQuality
all individuals: 1242
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3940
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28280
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2811
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

East Asian
type: Population
allele count: 6
allele frequency: 6.939625260235947e-4
allele num: 8646
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10394
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66508
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16186
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.204e0

DP
type: SiteQuality
SIO_000300: 1.940524e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.14e-1

QD
type: SiteQuality
SIO_000300: 1.459e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.3e-3

MQ
type: SiteQuality
SIO_000300: 5.647e1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.09e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.046e0

MQRankSum
type: SiteQuality
SIO_000300: -1.086e0

VQSLOD
type: SiteQuality
SIO_000300: 1.91e0

GenotypeQuality
all individuals: 132
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8200
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 238
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 172
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28566
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3657
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 252
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 141
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 75
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2707
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11053
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1077
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2511
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 294
bin: 2.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.156604210039325e-4
allele num: 8646
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16220
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10394
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66574
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.52e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.258e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.27e-2

MQRankSum
type: SiteQuality
SIO_000300: 1.29e-1

QD
type: SiteQuality
SIO_000300: 1.448e1

VQSLOD
type: SiteQuality
SIO_000300: 5.88e0

DP
type: SiteQuality
SIO_000300: 2.060597e6

ClippingRankSum
type: SiteQuality
SIO_000300: -2.86e-1

MQ
type: SiteQuality
SIO_000300: 5.954e1

GenotypeQuality
all individuals: 2707
bin: 7.25e1
variant carriers: 5

GenotypeQuality
all individuals: 8200
bin: 6.75e1
variant carriers: 6

GenotypeQuality
all individuals: 28566
bin: 6.25e1
variant carriers: 2

GenotypeQuality
all individuals: 1077
bin: 8.75e1
variant carriers: 8

GenotypeQuality
all individuals: 238
bin: 3.75e1
variant carriers: 2

GenotypeQuality
all individuals: 141
bin: 4.75e1
variant carriers: 1

GenotypeQuality
all individuals: 252
bin: 3.25e1
variant carriers: 1

GenotypeQuality
all individuals: 132
bin: 4.25e1
variant carriers: 2

GenotypeQuality
all individuals: 132
bin: 5.25e1
variant carriers: 4

GenotypeQuality
all individuals: 294
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 1.75e1
variant carriers: 1

GenotypeQuality
all individuals: 172
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3657
bin: 7.75e1
variant carriers: 7

GenotypeQuality
all individuals: 2511
bin: 8.25e1
variant carriers: 8

GenotypeQuality
all individuals: 1429
bin: 9.25e1
variant carriers: 8

European (Finnish)
type: Population
allele count: 392
allele frequency: 5.932203389830509e-2
allele num: 6608
num of homozygotes: 13

Latino
type: Population
allele count: 273
allele frequency: 2.361183186299948e-2
allele num: 11562
num of homozygotes: 2

African
type: Population
allele count: 789
allele frequency: 7.590917837213777e-2
allele num: 10394
num of homozygotes: 31

Other
type: Population
allele count: 51
allele frequency: 5.666666666666666e-2
allele num: 900
num of homozygotes: 2

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4872
allele frequency: 7.318172259440622e-2
allele num: 66574
num of homozygotes: 164

South Asian
type: Population
allele count: 155
allele frequency: 9.556103575832305e-3
allele num: 16220
num of homozygotes: 1

MQRankSum
type: SiteQuality
SIO_000300: 1.29e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.27e-2

DP
type: SiteQuality
SIO_000300: 2.060597e6

QD
type: SiteQuality
SIO_000300: 1.448e1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.954e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.52e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.88e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.258e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.86e-1

GenotypeQuality
all individuals: 31852
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 219
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5521
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 268
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2831
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 156
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4070
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1210
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3049
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 160
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1585
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9244
bin: 6.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16258
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.638562543192812e-5
allele num: 11576
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66584
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-3

FS
type: SiteQuality
SIO_000300: 3.456e0

VQSLOD
type: SiteQuality
SIO_000300: -2.843e0

DP
type: SiteQuality
SIO_000300: 1.873635e6

MQ
type: SiteQuality
SIO_000300: 5.924e1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.18e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.97e-1

MQRankSum
type: SiteQuality
SIO_000300: 9.48e-1

QD
type: SiteQuality
SIO_000300: 2.859e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.766e0

GenotypeQuality
all individuals: 88
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 108
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2819
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 78
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4064
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1208
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5520
bin: 9.75e1
variant carriers: 6

GenotypeQuality
all individuals: 6
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 213
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 77
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 136
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9268
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32289
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 2
allele frequency: 1.923076923076923e-4
allele num: 10400
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.640055296353897e-5
allele num: 11574
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.504910352283989e-5
allele num: 66594
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16312
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.7e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -1.565e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.544e1

MQRankSum
type: SiteQuality
SIO_000300: 2.48e-1

FS
type: SiteQuality
SIO_000300: 2.264e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.47e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.31e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.68e0

DP
type: SiteQuality
SIO_000300: 1.878099e6

GenotypeQuality
all individuals: 57
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32551
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3040
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4063
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 95
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1208
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 82
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 184
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2816
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5517
bin: 9.75e1
variant carriers: 27

African
type: Population
allele count: 1
allele frequency: 9.613535858488752e-5
allele num: 10402
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.512401693889897e-4
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16364
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 25
allele frequency: 3.753077523569327e-4
allele num: 66612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.879974e6

ClippingRankSum
type: SiteQuality
SIO_000300: -6.14e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.36e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.82e-1

MQ
type: SiteQuality
SIO_000300: 5.962e1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 5.67e0

MQRankSum
type: SiteQuality
SIO_000300: 1.13e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.1e-3

QD
type: SiteQuality
SIO_000300: 1.527e1

GenotypeQuality
all individuals: 9361
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3050
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
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variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32962
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5493
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 10
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4054
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2817
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1211
bin: 8.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.921968095329617e-4
allele num: 10406
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66650
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155802126675913e-4
allele num: 8652
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16480
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.64e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 1.21e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.664e0

MQRankSum
type: SiteQuality
SIO_000300: 3.33e-1

MQ
type: SiteQuality
SIO_000300: 5.922e1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 2.985e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.11e-1

DP
type: SiteQuality
SIO_000300: 1.88303e6

GenotypeQuality
all individuals: 1211
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9367
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 32992
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5486
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3052
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2813
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4053
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 2
allele frequency: 1.727414061150458e-4
allele num: 11578
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16490
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66660
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.609840476648087e-5
allele num: 10406
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.937e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.28e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 5.75e-1

FS
type: SiteQuality
SIO_000300: 5.472e0

QD
type: SiteQuality
SIO_000300: 1.503e1

VQSLOD
type: SiteQuality
SIO_000300: 4.74e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.42e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.94e0

DP
type: SiteQuality
SIO_000300: 1.882724e6

GenotypeQuality
all individuals: 33075
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2815
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5479
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1582
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1211
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66692
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.919e0

FS
type: SiteQuality
SIO_000300: 1.916e0

VQSLOD
type: SiteQuality
SIO_000300: 5.580000000000001e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.79e-1

QD
type: SiteQuality
SIO_000300: 8.960000000000001e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.57e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.67e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.938e1

DP
type: SiteQuality
SIO_000300: 1.883363e6

GenotypeQuality
all individuals: 3
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9378
bin: 6.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499430216517723e-5
allele num: 66692
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.916e0

QD
type: SiteQuality
SIO_000300: 8.960000000000001e0

VQSLOD
type: SiteQuality
SIO_000300: 5.580000000000001e-1

MQ
type: SiteQuality
SIO_000300: 5.938e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.919e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.67e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.57e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.79e-1

DP
type: SiteQuality
SIO_000300: 1.883363e6

GenotypeQuality
all individuals: 1581
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3051
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1210
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
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variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2814
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4050
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.922337562475971e-4
allele num: 10404
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66708
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -6.38e-1

FS
type: SiteQuality
SIO_000300: 1.882e0

BaseQRankSum
type: SiteQuality
SIO_000300: 9.14e-1

MQ
type: SiteQuality
SIO_000300: 5.932e1

VQSLOD
type: SiteQuality
SIO_000300: 6.14e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.09e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.883605e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.85e-1

QD
type: SiteQuality
SIO_000300: 1.181e1

GenotypeQuality
all individuals: 21
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
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variant carriers: 0

GenotypeQuality
all individuals: 3051
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 2

GenotypeQuality
all individuals: 6
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 3.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4050
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9379
bin: 6.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.49907057624273e-5
allele num: 66708
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.883605e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.181e1

MQ
type: SiteQuality
SIO_000300: 5.932e1

FS
type: SiteQuality
SIO_000300: 1.882e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.85e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.09e-1

MQRankSum
type: SiteQuality
SIO_000300: -6.38e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 9.14e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.14e-1

GenotypeQuality
all individuals: 5
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2808
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 7
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variant carriers: 0

GenotypeQuality
all individuals: 0
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4054
bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498845888665727e-5
allele num: 66718
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.102e0

BaseQRankSum
type: SiteQuality
SIO_000300: 6.41e-1

FS
type: SiteQuality
SIO_000300: 1.206e0

DP
type: SiteQuality
SIO_000300: 1.883011e6

QD
type: SiteQuality
SIO_000300: 1.584e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -4.753e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.919999999999999e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.2e0

GenotypeQuality
all individuals: 4
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
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variant carriers: 0

GenotypeQuality
all individuals: 16
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variant carriers: 0

GenotypeQuality
all individuals: 1575
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variant carriers: 0

GenotypeQuality
all individuals: 5
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 33127
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4052
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.997691777331455e-5
allele num: 66718
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.76e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.3e-1

QD
type: SiteQuality
SIO_000300: 8.18e0

FS
type: SiteQuality
SIO_000300: 1.634e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.07e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 1.26e0

VQSLOD
type: SiteQuality
SIO_000300: -6.777e-1

DP
type: SiteQuality
SIO_000300: 1.883206e6

MQ
type: SiteQuality
SIO_000300: 5.908e1