17-7011225-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7011225
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7011225
    reference: chr 17
allele count: 7650
allele frequency: 6.376168964310124e-2
allele num: 119978
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000458835
  ensembl transcript: ENST00000574868
  gene symbol: ASGR2
  hgvsc: ENST00000574868.1:c.339A>C
  hgvsp: ENST00000574868.1:c.339A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000254850
  ensembl transcript: ENST00000254850
  gene symbol: ASGR2
  hgvsc: ENST00000254850.7:c.282A>C
  hgvsp: ENST00000254850.7:c.282A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000370339
  ensembl transcript: ENST00000380952
  gene symbol: ASGR2
  hgvsc: ENST00000380952.2:c.354A>C
  hgvsp: ENST00000380952.2:c.354A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000405844
  ensembl transcript: ENST00000446679
  gene symbol: ASGR2
  hgvsc: ENST00000446679.2:c.297A>C
  hgvsp: ENST00000446679.2:c.297A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000161944
  ensembl transcript: ENST00000576487
  gene symbol: ASGR2
  hgvsc: ENST00000576487.1:n.651A>C
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000347140
  ensembl transcript: ENST00000355035
  gene symbol: ASGR2
  hgvsc: ENST00000355035.5:c.354A>C
  hgvsp: ENST00000355035.5:c.354A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000161944
  ensembl transcript: ENST00000450034
  gene symbol: ASGR2
  hgvsc: ENST00000450034.3:n.706A>C
  variant of: http://identifiers.org/hgnc/743
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 6.25e1
  variant carriers: 313
genotype depth: GenotypeDepth
  all individuals: 9845
  bin: 3.25e1
  variant carriers: 824
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 9.25e1
  variant carriers: 36
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 8.75e1
  variant carriers: 47
genotype depth: GenotypeDepth
  all individuals: 1274
  bin: 1.25e1
  variant carriers: 60
genotype depth: GenotypeDepth
  all individuals: 24991
  bin: 2.75e1
  variant carriers: 588
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 8.25e1
  variant carriers: 64
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 7.5e0
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 1.75e1
  variant carriers: 151
genotype depth: GenotypeDepth
  all individuals: 716
  bin: 5.75e1
  variant carriers: 432
genotype depth: GenotypeDepth
  all individuals: 12876
  bin: 2.25e1
  variant carriers: 329
genotype depth: GenotypeDepth
  all individuals: 845
  bin: 9.75e1
  variant carriers: 620
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 7.25e1
  variant carriers: 126
genotype depth: GenotypeDepth
  all individuals: 1252
  bin: 4.75e1
  variant carriers: 779
genotype depth: GenotypeDepth
  all individuals: 969
  bin: 5.25e1
  variant carriers: 615
genotype depth: GenotypeDepth
  all individuals: 1736
  bin: 4.25e1
  variant carriers: 914
genotype depth: GenotypeDepth
  all individuals: 2883
  bin: 3.75e1
  variant carriers: 955
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 6.75e1
  variant carriers: 227
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 7.75e1
  variant carriers: 96
genotype quality: GenotypeQuality
  all individuals: 34000
  bin: 6.25e1
  variant carriers: 16
genotype quality: GenotypeQuality
  all individuals: 2074
  bin: 7.25e1
  variant carriers: 15
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 7.5e0
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 4.25e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 1178
  bin: 2.25e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 1149
  bin: 8.25e1
  variant carriers: 24
genotype quality: GenotypeQuality
  all individuals: 9918
  bin: 9.75e1
  variant carriers: 6982
hgvs: c.354A>C
num of homozygotes: 482
population: African
population: Latino
population: European (Finnish)
population: East Asian
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: T
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum

http://identifiers.org/exac.variant/17-7011227-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7011227
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7011227
    reference: chr 17
allele count: 38
allele frequency: 3.173330661054882e-4
allele num: 119748
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000458835
  ensembl transcript: ENST00000574868
  gene symbol: ASGR2
  hgvsc: ENST00000574868.1:c.338-1G>T
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000254850
  ensembl transcript: ENST00000254850
  gene symbol: ASGR2
  hgvsc: ENST00000254850.7:c.281-1G>T
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000405844
  ensembl transcript: ENST00000446679
  gene symbol: ASGR2
  hgvsc: ENST00000446679.2:c.296-1G>T
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: true
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000370339
  ensembl transcript: ENST00000380952
  gene symbol: ASGR2
  hgvsc: ENST00000380952.2:c.353-1G>T
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000161944
  ensembl transcript: ENST00000450034
  gene symbol: ASGR2
  hgvsc: ENST00000450034.3:n.705-1G>T
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000347140
  ensembl transcript: ENST00000355035
  gene symbol: ASGR2
  hgvsc: ENST00000355035.5:c.353-1G>T
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000161944
  ensembl transcript: ENST00000576487
  gene symbol: ASGR2
  hgvsc: ENST00000576487.1:n.650-1G>T
  variant of: http://identifiers.org/hgnc/743
canonical: true
consequence: splice acceptor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 769
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 920
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 521
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 8.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 540
  bin: 4.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 7.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 10104
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 27727
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 13716
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1671
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 6.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2181
  bin: 3.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 340
  bin: 5.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3515
  bin: 9.75e1
  variant carriers: 36
genotype quality: GenotypeQuality
  all individuals: 8209
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1560
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 166
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2412
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 554
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 236
  bin: 5.25e1
  variant carriers: 0
hgvs: c.353-1G>T
num of homozygotes: 1
population: South Asian
population: Other
population: African
population: Latino
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum

17-7011231-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7011231
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7011231
    reference: chr 17
allele count: 3
allele frequency: 2.509830168158621e-5
allele num: 119530
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000254850
  ensembl transcript: ENST00000254850
  gene symbol: ASGR2
  hgvsc: ENST00000254850.7:c.281-5T>C
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl transcript: ENST00000576487
  gene symbol: ASGR2
  hgvsc: ENST00000576487.1:n.650-5T>C
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000458835
  ensembl transcript: ENST00000574868
  gene symbol: ASGR2
  hgvsc: ENST00000574868.1:c.338-5T>C
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000405844
  ensembl transcript: ENST00000446679
  gene symbol: ASGR2
  hgvsc: ENST00000446679.2:c.296-5T>C
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000370339
  ensembl transcript: ENST00000380952
  gene symbol: ASGR2
  hgvsc: ENST00000380952.2:c.353-5T>C
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000347140
  ensembl transcript: ENST00000355035
  gene symbol: ASGR2
  hgvsc: ENST00000355035.5:c.353-5T>C
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl transcript: ENST00000450034
  gene symbol: ASGR2
  hgvsc: ENST00000450034.3:n.705-5T>C
  variant of: http://identifiers.org/hgnc/743
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2158
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2225
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13582
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 27227
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 727
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 911
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9919
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 879
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 734
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1924
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8070
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 511
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 649
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37531
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 128
  bin: 4.25e1
  variant carriers: 0
hgvs: c.353-5T>C
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: DP

17-7011232-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7011232
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7011232
    reference: chr 17
allele count: 15
allele frequency: 1.254957080467848e-4
allele num: 119526
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000405844
  ensembl transcript: ENST00000446679
  gene symbol: ASGR2
  hgvsc: ENST00000446679.2:c.296-6T>C
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000370339
  ensembl transcript: ENST00000380952
  gene symbol: ASGR2
  hgvsc: ENST00000380952.2:c.353-6T>C
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl transcript: ENST00000450034
  gene symbol: ASGR2
  hgvsc: ENST00000450034.3:n.705-6T>C
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000347140
  ensembl transcript: ENST00000355035
  gene symbol: ASGR2
  hgvsc: ENST00000355035.5:c.353-6T>C
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl transcript: ENST00000576487
  gene symbol: ASGR2
  hgvsc: ENST00000576487.1:n.650-6T>C
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000254850
  ensembl transcript: ENST00000254850
  gene symbol: ASGR2
  hgvsc: ENST00000254850.7:c.281-6T>C
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000458835
  ensembl transcript: ENST00000574868
  gene symbol: ASGR2
  hgvsc: ENST00000574868.1:c.338-6T>C
  variant of: http://identifiers.org/hgnc/743
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 27219
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 727
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13600
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2229
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 880
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 907
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 9903
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 4.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2160
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2250
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 646
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37702
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 509
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2371
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 391
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3485
  bin: 9.75e1
  variant carriers: 15
genotype quality: GenotypeQuality
  all individuals: 152
  bin: 5.75e1
  variant carriers: 0
hgvs: c.353-6T>C
num of homozygotes: 0
population: African
population: South Asian
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: A
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ

17-7011235-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7011235
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7011235
    reference: chr 17
allele count: 19
allele frequency: 1.593344850141724e-4
allele num: 119246
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000254850
  ensembl transcript: ENST00000254850
  gene symbol: ASGR2
  hgvsc: ENST00000254850.7:c.281-9C>T
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl transcript: ENST00000576487
  gene symbol: ASGR2
  hgvsc: ENST00000576487.1:n.650-9C>T
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000458835
  ensembl transcript: ENST00000574868
  gene symbol: ASGR2
  hgvsc: ENST00000574868.1:c.338-9C>T
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl transcript: ENST00000450034
  gene symbol: ASGR2
  hgvsc: ENST00000450034.3:n.705-9C>T
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000405844
  ensembl transcript: ENST00000446679
  gene symbol: ASGR2
  hgvsc: ENST00000446679.2:c.296-9C>T
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000370339
  ensembl transcript: ENST00000380952
  gene symbol: ASGR2
  hgvsc: ENST00000380952.2:c.353-9C>T
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000347140
  ensembl transcript: ENST00000355035
  gene symbol: ASGR2
  hgvsc: ENST00000355035.5:c.353-9C>T
  variant of: http://identifiers.org/hgnc/743
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 9763
  bin: 3.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 981
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26762
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2757
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 974
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13349
  bin: 2.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 910
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2132
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 211
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2181
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 195
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 634
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 956
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1217
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: South Asian
population: East Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: QD

17-7011236-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7011236
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7011236
    reference: chr 17
allele count: 1
allele frequency: 8.38799510141086e-6
allele num: 119218
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl transcript: ENST00000576487
  gene symbol: ASGR2
  hgvsc: ENST00000576487.1:n.650-10C>G
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000370339
  ensembl transcript: ENST00000380952
  gene symbol: ASGR2
  hgvsc: ENST00000380952.2:c.353-10C>G
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000347140
  ensembl transcript: ENST00000355035
  gene symbol: ASGR2
  hgvsc: ENST00000355035.5:c.353-10C>G
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000405844
  ensembl transcript: ENST00000446679
  gene symbol: ASGR2
  hgvsc: ENST00000446679.2:c.296-10C>G
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000254850
  ensembl transcript: ENST00000254850
  gene symbol: ASGR2
  hgvsc: ENST00000254850.7:c.281-10C>G
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl transcript: ENST00000450034
  gene symbol: ASGR2
  hgvsc: ENST00000450034.3:n.705-10C>G
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000458835
  ensembl transcript: ENST00000574868
  gene symbol: ASGR2
  hgvsc: ENST00000574868.1:c.338-10C>G
  variant of: http://identifiers.org/hgnc/743
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9648
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1040
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2110
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1013
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26632
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2982
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13319
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 892
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 313
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3458
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 807
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 200
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2169
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 272
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2387
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: Latino
population: African
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: MQ

17-7011244-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7011244
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7011244
    reference: chr 17
allele count: 1
allele frequency: 8.430708010858751e-6
allele num: 118614
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl transcript: ENST00000576487
  gene symbol: ASGR2
  hgvsc: ENST00000576487.1:n.650-18C>T
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000370339
  ensembl transcript: ENST00000380952
  gene symbol: ASGR2
  hgvsc: ENST00000380952.2:c.353-18C>T
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000347140
  ensembl transcript: ENST00000355035
  gene symbol: ASGR2
  hgvsc: ENST00000355035.5:c.353-18C>T
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000405844
  ensembl transcript: ENST00000446679
  gene symbol: ASGR2
  hgvsc: ENST00000446679.2:c.296-18C>T
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000458835
  ensembl transcript: ENST00000574868
  gene symbol: ASGR2
  hgvsc: ENST00000574868.1:c.338-18C>T
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl transcript: ENST00000450034
  gene symbol: ASGR2
  hgvsc: ENST00000450034.3:n.705-18C>T
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000254850
  ensembl transcript: ENST00000254850
  gene symbol: ASGR2
  hgvsc: ENST00000254850.7:c.281-18C>T
  variant of: http://identifiers.org/hgnc/743
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5059
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24725
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1276
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12210
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 398
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2293
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9144
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 874
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2038
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1367
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 479
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7302
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1961
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33779
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 617
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Non-Finnish)
population: Other
population: African
population: European (Finnish)
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum

17-7011247-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7011247
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7011247
    reference: chr 17
allele count: 1
allele frequency: 8.446088616361763e-6
allele num: 118398
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000458835
  ensembl transcript: ENST00000574868
  gene symbol: ASGR2
  hgvsc: ENST00000574868.1:c.338-21C>G
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000347140
  ensembl transcript: ENST00000355035
  gene symbol: ASGR2
  hgvsc: ENST00000355035.5:c.353-21C>G
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl transcript: ENST00000576487
  gene symbol: ASGR2
  hgvsc: ENST00000576487.1:n.650-21C>G
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000405844
  ensembl transcript: ENST00000446679
  gene symbol: ASGR2
  hgvsc: ENST00000446679.2:c.296-21C>G
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000370339
  ensembl transcript: ENST00000380952
  gene symbol: ASGR2
  hgvsc: ENST00000380952.2:c.353-21C>G
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl transcript: ENST00000450034
  gene symbol: ASGR2
  hgvsc: ENST00000450034.3:n.705-21C>G
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000254850
  ensembl transcript: ENST00000254850
  gene symbol: ASGR2
  hgvsc: ENST00000254850.7:c.281-21C>G
  variant of: http://identifiers.org/hgnc/743
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23438
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1373
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11650
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 862
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 398
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6288
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8708
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3295
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1997
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2565
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 484
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1985
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 552
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 474
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 611
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1727
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Latino
population: East Asian
population: South Asian
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD

17-7011254-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7011254
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7011254
    reference: chr 17
allele count: 10
allele frequency: 8.499354049092269e-5
allele num: 117656
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000347140
  ensembl transcript: ENST00000355035
  gene symbol: ASGR2
  hgvsc: ENST00000355035.5:c.353-28G>A
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl transcript: ENST00000576487
  gene symbol: ASGR2
  hgvsc: ENST00000576487.1:n.650-28G>A
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000405844
  ensembl transcript: ENST00000446679
  gene symbol: ASGR2
  hgvsc: ENST00000446679.2:c.296-28G>A
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000254850
  ensembl transcript: ENST00000254850
  gene symbol: ASGR2
  hgvsc: ENST00000254850.7:c.281-28G>A
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000370339
  ensembl transcript: ENST00000380952
  gene symbol: ASGR2
  hgvsc: ENST00000380952.2:c.353-28G>A
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl transcript: ENST00000450034
  gene symbol: ASGR2
  hgvsc: ENST00000450034.3:n.705-28G>A
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000458835
  ensembl transcript: ENST00000574868
  gene symbol: ASGR2
  hgvsc: ENST00000574868.1:c.338-28G>A
  variant of: http://identifiers.org/hgnc/743
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8634
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10718
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1563
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 840
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7540
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19750
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1849
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 398
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6696
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 686
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 117
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4115
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 596
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 146
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3138
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1060
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1077
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5406
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: African
population: Other
population: European (Finnish)
population: South Asian
population: Latino
reference allele: C
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff

17-7011255-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7011255
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7011255
    reference: chr 17
allele count: 3
allele frequency: 2.550413166933043e-5
allele num: 117628
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000347140
  ensembl transcript: ENST00000355035
  gene symbol: ASGR2
  hgvsc: ENST00000355035.5:c.353-29C>T
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000370339
  ensembl transcript: ENST00000380952
  gene symbol: ASGR2
  hgvsc: ENST00000380952.2:c.353-29C>T
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000254850
  ensembl transcript: ENST00000254850
  gene symbol: ASGR2
  hgvsc: ENST00000254850.7:c.281-29C>T
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl transcript: ENST00000576487
  gene symbol: ASGR2
  hgvsc: ENST00000576487.1:n.650-29C>T
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000405844
  ensembl transcript: ENST00000446679
  gene symbol: ASGR2
  hgvsc: ENST00000446679.2:c.296-29C>T
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl transcript: ENST00000450034
  gene symbol: ASGR2
  hgvsc: ENST00000450034.3:n.705-29C>T
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000458835
  ensembl transcript: ENST00000574868
  gene symbol: ASGR2
  hgvsc: ENST00000574868.1:c.338-29C>T
  variant of: http://identifiers.org/hgnc/743
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 822
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10863
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1813
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7314
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6714
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1591
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8714
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19759
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 399
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 591
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6060
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1883
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5485
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1059
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 134
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1056
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3139
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 600
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Other
population: East Asian
population: Latino
reference allele: G
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: DP

17-7011258-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7011258
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7011258
    reference: chr 17
allele count: 1
allele frequency: 8.504703100814751e-6
allele num: 117582
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000458835
  ensembl transcript: ENST00000574868
  gene symbol: ASGR2
  hgvsc: ENST00000574868.1:c.338-32C>T
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl transcript: ENST00000450034
  gene symbol: ASGR2
  hgvsc: ENST00000450034.3:n.705-32C>T
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000370339
  ensembl transcript: ENST00000380952
  gene symbol: ASGR2
  hgvsc: ENST00000380952.2:c.353-32C>T
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000254850
  ensembl transcript: ENST00000254850
  gene symbol: ASGR2
  hgvsc: ENST00000254850.7:c.281-32C>T
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl transcript: ENST00000576487
  gene symbol: ASGR2
  hgvsc: ENST00000576487.1:n.650-32C>T
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000347140
  ensembl transcript: ENST00000355035
  gene symbol: ASGR2
  hgvsc: ENST00000355035.5:c.353-32C>T
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000405844
  ensembl transcript: ENST00000446679
  gene symbol: ASGR2
  hgvsc: ENST00000446679.2:c.296-32C>T
  variant of: http://identifiers.org/hgnc/743
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8357
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18321
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1659
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10626
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 809
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9374
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1746
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 399
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 521
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6686
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4732
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3757
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5625
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1799
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 138
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 341
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 111
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1670
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 162
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: Latino
population: European (Non-Finnish)
population: African
population: South Asian
population: East Asian
reference allele: G
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum

17-7011269-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7011269
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7011269
    reference: chr 17
allele count: 9
allele frequency: 7.766521116307968e-5
allele num: 115882
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000458835
  ensembl transcript: ENST00000574868
  gene symbol: ASGR2
  hgvsc: ENST00000574868.1:c.338-43G>C
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000405844
  ensembl transcript: ENST00000446679
  gene symbol: ASGR2
  hgvsc: ENST00000446679.2:c.296-43G>C
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl transcript: ENST00000450034
  gene symbol: ASGR2
  hgvsc: ENST00000450034.3:n.705-43G>C
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl transcript: ENST00000576487
  gene symbol: ASGR2
  hgvsc: ENST00000576487.1:n.650-43G>C
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000370339
  ensembl transcript: ENST00000380952
  gene symbol: ASGR2
  hgvsc: ENST00000380952.2:c.353-43G>C
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000347140
  ensembl transcript: ENST00000355035
  gene symbol: ASGR2
  hgvsc: ENST00000355035.5:c.353-43G>C
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000254850
  ensembl transcript: ENST00000254850
  gene symbol: ASGR2
  hgvsc: ENST00000254850.7:c.281-43G>C
  variant of: http://identifiers.org/hgnc/743
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1573
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4510
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10505
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11358
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2200
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10016
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16598
  bin: 1.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 787
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 512
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7016
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 428
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3419
  bin: 9.75e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 3298
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1551
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4405
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 314
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3650
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 515
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: South Asian
population: European (Finnish)
population: East Asian
population: Other
reference allele: C
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff

17-7011269-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7011269
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7011269
    reference: chr 17
allele count: 3
allele frequency: 2.588840372102656e-5
allele num: 115882
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl transcript: ENST00000450034
  gene symbol: ASGR2
  hgvsc: ENST00000450034.3:n.705-43G>A
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000370339
  ensembl transcript: ENST00000380952
  gene symbol: ASGR2
  hgvsc: ENST00000380952.2:c.353-43G>A
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000347140
  ensembl transcript: ENST00000355035
  gene symbol: ASGR2
  hgvsc: ENST00000355035.5:c.353-43G>A
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000405844
  ensembl transcript: ENST00000446679
  gene symbol: ASGR2
  hgvsc: ENST00000446679.2:c.296-43G>A
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000458835
  ensembl transcript: ENST00000574868
  gene symbol: ASGR2
  hgvsc: ENST00000574868.1:c.338-43G>A
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl transcript: ENST00000576487
  gene symbol: ASGR2
  hgvsc: ENST00000576487.1:n.650-43G>A
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000254850
  ensembl transcript: ENST00000254850
  gene symbol: ASGR2
  hgvsc: ENST00000254850.7:c.281-43G>A
  variant of: http://identifiers.org/hgnc/743
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1573
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16598
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 10505
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2200
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4510
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11358
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 787
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 512
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10016
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1832
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1356
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3650
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 314
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 428
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1551
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 515
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3419
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 966
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Other
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum

17-7011270-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7011270
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7011270
    reference: chr 17
allele count: 1
allele frequency: 8.645881966419394e-6
allele num: 115662
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000347140
  ensembl transcript: ENST00000355035
  gene symbol: ASGR2
  hgvsc: ENST00000355035.5:c.353-44C>T
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000254850
  ensembl transcript: ENST00000254850
  gene symbol: ASGR2
  hgvsc: ENST00000254850.7:c.281-44C>T
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000458835
  ensembl transcript: ENST00000574868
  gene symbol: ASGR2
  hgvsc: ENST00000574868.1:c.338-44C>T
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl transcript: ENST00000450034
  gene symbol: ASGR2
  hgvsc: ENST00000450034.3:n.705-44C>T
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000370339
  ensembl transcript: ENST00000380952
  gene symbol: ASGR2
  hgvsc: ENST00000380952.2:c.353-44C>T
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl transcript: ENST00000576487
  gene symbol: ASGR2
  hgvsc: ENST00000576487.1:n.650-44C>T
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000405844
  ensembl transcript: ENST00000446679
  gene symbol: ASGR2
  hgvsc: ENST00000446679.2:c.296-44C>T
  variant of: http://identifiers.org/hgnc/743
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 10076
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11571
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 781
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16543
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1552
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4317
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 511
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2231
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10473
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1524
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1316
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3308
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 132
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4414
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6278
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 440
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 346
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 509
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 376
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: G
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum

17-7011271-TCCTCA-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7011271
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7011266
    reference: chr 17
allele count: 7
allele frequency: 6.04114885390776e-5
allele num: 115872
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000254850
  ensembl transcript: ENST00000254850
  gene symbol: ASGR2
  hgvsc: ENST00000254850.7:c.281-50_281-46delTGAGG
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000347140
  ensembl transcript: ENST00000355035
  gene symbol: ASGR2
  hgvsc: ENST00000355035.5:c.353-50_353-46delTGAGG
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl transcript: ENST00000576487
  gene symbol: ASGR2
  hgvsc: ENST00000576487.1:n.650-50_650-46delTGAGG
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl transcript: ENST00000450034
  gene symbol: ASGR2
  hgvsc: ENST00000450034.3:n.705-50_705-46delTGAGG
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000370339
  ensembl transcript: ENST00000380952
  gene symbol: ASGR2
  hgvsc: ENST00000380952.2:c.353-50_353-46delTGAGG
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000405844
  ensembl transcript: ENST00000446679
  gene symbol: ASGR2
  hgvsc: ENST00000446679.2:c.296-50_296-46delTGAGG
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000458835
  ensembl transcript: ENST00000574868
  gene symbol: ASGR2
  hgvsc: ENST00000574868.1:c.338-50_338-46delTGAGG
  variant of: http://identifiers.org/hgnc/743
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 511
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 775
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10097
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16453
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4159
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12355
  bin: 2.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1537
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9852
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2316
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4796
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3588
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6224
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 515
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 355
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 325
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1315
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 460
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1521
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: Latino
population: Other
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: TCCTCA
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: ClippingRankSum

17-7011746-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7011746
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7011746
    reference: chr 17
allele count: 1
allele frequency: 4.30551967622492e-5
allele num: 23226
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000458835
  ensembl transcript: ENST00000574868
  gene symbol: ASGR2
  hgvsc: ENST00000574868.1:c.337+35G>A
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000405844
  ensembl transcript: ENST00000446679
  gene symbol: ASGR2
  hgvsc: ENST00000446679.2:c.295+35G>A
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000254850
  ensembl transcript: ENST00000254850
  gene symbol: ASGR2
  hgvsc: ENST00000254850.7:c.280+35G>A
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl transcript: ENST00000576487
  gene symbol: ASGR2
  hgvsc: ENST00000576487.1:n.649+35G>A
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000370339
  ensembl transcript: ENST00000380952
  gene symbol: ASGR2
  hgvsc: ENST00000380952.2:c.352+35G>A
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl transcript: ENST00000450034
  gene symbol: ASGR2
  hgvsc: ENST00000450034.3:n.704+35G>A
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000347140
  ensembl transcript: ENST00000355035
  gene symbol: ASGR2
  hgvsc: ENST00000355035.5:c.352+35G>A
  variant of: http://identifiers.org/hgnc/743
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1899
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 610
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5712
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25307
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22346
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1287
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 947
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18174
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2093
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1139
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 557
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 135
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4006
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5715
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 261
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1923
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 334
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Other
population: Latino
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
reference allele: C
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ

17-7011747-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7011747
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7011747
    reference: chr 17
allele count: 5
allele frequency: 2.110417018402836e-4
allele num: 23692
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl transcript: ENST00000450034
  gene symbol: ASGR2
  hgvsc: ENST00000450034.3:n.704+34C>T
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000405844
  ensembl transcript: ENST00000446679
  gene symbol: ASGR2
  hgvsc: ENST00000446679.2:c.295+34C>T
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000370339
  ensembl transcript: ENST00000380952
  gene symbol: ASGR2
  hgvsc: ENST00000380952.2:c.352+34C>T
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000254850
  ensembl transcript: ENST00000254850
  gene symbol: ASGR2
  hgvsc: ENST00000254850.7:c.280+34C>T
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000347140
  ensembl transcript: ENST00000355035
  gene symbol: ASGR2
  hgvsc: ENST00000355035.5:c.352+34C>T
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl transcript: ENST00000576487
  gene symbol: ASGR2
  hgvsc: ENST00000576487.1:n.649+34C>T
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000458835
  ensembl transcript: ENST00000574868
  gene symbol: ASGR2
  hgvsc: ENST00000574868.1:c.337+34C>T
  variant of: http://identifiers.org/hgnc/743
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 616
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1226
  bin: 1.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 979
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21801
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2055
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5709
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25784
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1857
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2137
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 246
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18732
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4049
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5391
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 111
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 275
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 336
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 18520
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: African
population: South Asian
population: Other
population: Latino
reference allele: G
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum

17-7011749-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7011749
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7011749
    reference: chr 17
allele count: 0
allele frequency: 0.0e0
allele num: 24308
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000254850
  ensembl transcript: ENST00000254850
  gene symbol: ASGR2
  hgvsc: ENST00000254850.7:c.280+32T>C
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000405844
  ensembl transcript: ENST00000446679
  gene symbol: ASGR2
  hgvsc: ENST00000446679.2:c.295+32T>C
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl transcript: ENST00000576487
  gene symbol: ASGR2
  hgvsc: ENST00000576487.1:n.649+32T>C
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000458835
  ensembl transcript: ENST00000574868
  gene symbol: ASGR2
  hgvsc: ENST00000574868.1:c.337+32T>C
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000370339
  ensembl transcript: ENST00000380952
  gene symbol: ASGR2
  hgvsc: ENST00000380952.2:c.352+32T>C
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl transcript: ENST00000450034
  gene symbol: ASGR2
  hgvsc: ENST00000450034.3:n.704+32T>C
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000347140
  ensembl transcript: ENST00000355035
  gene symbol: ASGR2
  hgvsc: ENST00000355035.5:c.352+32T>C
  variant of: http://identifiers.org/hgnc/743
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 2251
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1007
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1133
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21066
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26463
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 5736
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 294
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4958
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 320
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 217
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 18159
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1233
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1352
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 246
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3798
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: Latino
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: African
reference allele: A
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP

17-7011753-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7011753
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7011753
    reference: chr 17
allele count: 1
allele frequency: 4.031932908636401e-5
allele num: 24802
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000347140
  ensembl transcript: ENST00000355035
  gene symbol: ASGR2
  hgvsc: ENST00000355035.5:c.352+28T>C
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000405844
  ensembl transcript: ENST00000446679
  gene symbol: ASGR2
  hgvsc: ENST00000446679.2:c.295+28T>C
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl transcript: ENST00000576487
  gene symbol: ASGR2
  hgvsc: ENST00000576487.1:n.649+28T>C
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000254850
  ensembl transcript: ENST00000254850
  gene symbol: ASGR2
  hgvsc: ENST00000254850.7:c.280+28T>C
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000370339
  ensembl transcript: ENST00000380952
  gene symbol: ASGR2
  hgvsc: ENST00000380952.2:c.352+28T>C
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl transcript: ENST00000450034
  gene symbol: ASGR2
  hgvsc: ENST00000450034.3:n.704+28T>C
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000458835
  ensembl transcript: ENST00000574868
  gene symbol: ASGR2
  hgvsc: ENST00000574868.1:c.337+28T>C
  variant of: http://identifiers.org/hgnc/743
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 19308
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 947
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28137
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5622
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2750
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1051
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22679
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 218
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 265
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 248
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4093
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1083
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 290
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3352
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1000
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: Other
population: South Asian
population: East Asian
population: African
population: European (Finnish)
reference allele: A
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: DP

17-7011761-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7011761
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7011761
    reference: chr 17
allele count: 0
allele frequency: 0.0e0
allele num: 26852
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl transcript: ENST00000450034
  gene symbol: ASGR2
  hgvsc: ENST00000450034.3:n.704+20G>A
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000370339
  ensembl transcript: ENST00000380952
  gene symbol: ASGR2
  hgvsc: ENST00000380952.2:c.352+20G>A
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000347140
  ensembl transcript: ENST00000355035
  gene symbol: ASGR2
  hgvsc: ENST00000355035.5:c.352+20G>A
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000405844
  ensembl transcript: ENST00000446679
  gene symbol: ASGR2
  hgvsc: ENST00000446679.2:c.295+20G>A
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000254850
  ensembl transcript: ENST00000254850
  gene symbol: ASGR2
  hgvsc: ENST00000254850.7:c.280+20G>A
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000458835
  ensembl transcript: ENST00000574868
  gene symbol: ASGR2
  hgvsc: ENST00000574868.1:c.337+20G>A
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl transcript: ENST00000576487
  gene symbol: ASGR2
  hgvsc: ENST00000576487.1:n.649+20G>A
  variant of: http://identifiers.org/hgnc/743
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 807
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14956
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5635
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 668
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31574
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1243
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3802
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 262
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1232
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2243
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 237
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 224
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 297
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2742
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3743
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3543
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 206
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: South Asian
population: Latino
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
reference allele: C
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum

17-7011764-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7011764
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7011764
    reference: chr 17
allele count: 12
allele frequency: 4.197565412061005e-4
allele num: 28588
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000347140
  ensembl transcript: ENST00000355035
  gene symbol: ASGR2
  hgvsc: ENST00000355035.5:c.352+17C>T
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000254850
  ensembl transcript: ENST00000254850
  gene symbol: ASGR2
  hgvsc: ENST00000254850.7:c.280+17C>T
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000458835
  ensembl transcript: ENST00000574868
  gene symbol: ASGR2
  hgvsc: ENST00000574868.1:c.337+17C>T
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl transcript: ENST00000576487
  gene symbol: ASGR2
  hgvsc: ENST00000576487.1:n.649+17C>T
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000370339
  ensembl transcript: ENST00000380952
  gene symbol: ASGR2
  hgvsc: ENST00000380952.2:c.352+17C>T
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl transcript: ENST00000450034
  gene symbol: ASGR2
  hgvsc: ENST00000450034.3:n.704+17C>T
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000405844
  ensembl transcript: ENST00000446679
  gene symbol: ASGR2
  hgvsc: ENST00000446679.2:c.295+17C>T
  variant of: http://identifiers.org/hgnc/743
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4505
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32896
  bin: 7.5e0
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 801
  bin: 1.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1392
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12954
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 684
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5564
  bin: 1.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 229
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2222
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 29949
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 757
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1903
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 542
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2151
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2110
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12130
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: East Asian
population: African
population: Other
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum

17-7011767-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7011767
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7011767
    reference: chr 17
allele count: 4
allele frequency: 1.291989664082687e-4
allele num: 30960
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000347140
  ensembl transcript: ENST00000355035
  gene symbol: ASGR2
  hgvsc: ENST00000355035.5:c.352+14C>T
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000458835
  ensembl transcript: ENST00000574868
  gene symbol: ASGR2
  hgvsc: ENST00000574868.1:c.337+14C>T
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl transcript: ENST00000576487
  gene symbol: ASGR2
  hgvsc: ENST00000576487.1:n.649+14C>T
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl transcript: ENST00000450034
  gene symbol: ASGR2
  hgvsc: ENST00000450034.3:n.704+14C>T
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000405844
  ensembl transcript: ENST00000446679
  gene symbol: ASGR2
  hgvsc: ENST00000446679.2:c.295+14C>T
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000370339
  ensembl transcript: ENST00000380952
  gene symbol: ASGR2
  hgvsc: ENST00000380952.2:c.352+14C>T
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000254850
  ensembl transcript: ENST00000254850
  gene symbol: ASGR2
  hgvsc: ENST00000254850.7:c.280+14C>T
  variant of: http://identifiers.org/hgnc/743
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1666
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34520
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 725
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5489
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 802
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5747
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9950
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1441
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9540
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 196
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 231
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 328
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 295
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1713
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 212
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1240
  bin: 9.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 798
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: Latino
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: South Asian
reference allele: G
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: ClippingRankSum

17-7011774-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7011774
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7011774
    reference: chr 17
allele count: 1
allele frequency: 2.673367908891622e-5
allele num: 37406
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000347140
  ensembl transcript: ENST00000355035
  gene symbol: ASGR2
  hgvsc: ENST00000355035.5:c.352+7G>A
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl transcript: ENST00000450034
  gene symbol: ASGR2
  hgvsc: ENST00000450034.3:n.704+7G>A
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000405844
  ensembl transcript: ENST00000446679
  gene symbol: ASGR2
  hgvsc: ENST00000446679.2:c.295+7G>A
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000370339
  ensembl transcript: ENST00000380952
  gene symbol: ASGR2
  hgvsc: ENST00000380952.2:c.352+7G>A
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl transcript: ENST00000576487
  gene symbol: ASGR2
  hgvsc: ENST00000576487.1:n.649+7G>A
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000254850
  ensembl transcript: ENST00000254850
  gene symbol: ASGR2
  hgvsc: ENST00000254850.7:c.280+7G>A
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000458835
  ensembl transcript: ENST00000574868
  gene symbol: ASGR2
  hgvsc: ENST00000574868.1:c.337+7G>A
  variant of: http://identifiers.org/hgnc/743
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6255
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35306
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 936
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 802
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5457
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2056
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8172
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1176
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34477
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 348
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1044
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 197
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 292
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 806
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1755
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6103
  bin: 7.5e0
  variant carriers: 0
hgvs: c.352+7G>A
num of homozygotes: 0
population: East Asian
population: Other
population: European (Non-Finnish)
population: African
population: South Asian
population: European (Finnish)
population: Latino
reference allele: C
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: DP

17-7011781-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7011781
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7011781
    reference: chr 17
allele count: 2
allele frequency: 4.554771122751081e-5
allele num: 43910
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000161944
  ensembl transcript: ENST00000576487
  gene symbol: ASGR2
  hgvsc: ENST00000576487.1:n.649G>A
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000254850
  ensembl transcript: ENST00000254850
  gene symbol: ASGR2
  hgvsc: ENST00000254850.7:c.280G>A
  hgvsp: ENSP00000254850.7:p.Gly94Arg
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000405844
  ensembl transcript: ENST00000446679
  gene symbol: ASGR2
  hgvsc: ENST00000446679.2:c.295G>A
  hgvsp: ENSP00000405844.2:p.Gly99Arg
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000347140
  ensembl transcript: ENST00000355035
  gene symbol: ASGR2
  hgvsc: ENST00000355035.5:c.352G>A
  hgvsp: ENSP00000347140.5:p.Gly118Arg
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000161944
  ensembl transcript: ENST00000450034
  gene symbol: ASGR2
  hgvsc: ENST00000450034.3:n.704G>A
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000458835
  ensembl transcript: ENST00000574868
  gene symbol: ASGR2
  hgvsc: ENST00000574868.1:c.337G>A
  hgvsp: ENSP00000458835.1:p.Gly113Arg
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000370339
  ensembl transcript: ENST00000380952
  gene symbol: ASGR2
  hgvsc: ENST00000380952.2:c.352G>A
  hgvsp: ENSP00000370339.2:p.Gly118Arg
  variant of: http://identifiers.org/hgnc/743
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10956
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 878
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2399
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5420
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4063
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34222
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1095
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 246
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 892
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 323
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 346
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 299
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33999
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4013
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Gly118Arg
num of homozygotes: 0
population: African
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: Other
reference allele: C
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD

17-7011782-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7011782
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7011782
    reference: chr 17
allele count: 27
allele frequency: 5.967905928119889e-4
allele num: 45242
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000161944
  ensembl transcript: ENST00000576487
  gene symbol: ASGR2
  hgvsc: ENST00000576487.1:n.648C>T
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000405844
  ensembl transcript: ENST00000446679
  gene symbol: ASGR2
  hgvsc: ENST00000446679.2:c.294C>T
  hgvsp: ENST00000446679.2:c.294C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000254850
  ensembl transcript: ENST00000254850
  gene symbol: ASGR2
  hgvsc: ENST00000254850.7:c.279C>T
  hgvsp: ENST00000254850.7:c.279C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000370339
  ensembl transcript: ENST00000380952
  gene symbol: ASGR2
  hgvsc: ENST00000380952.2:c.351C>T
  hgvsp: ENST00000380952.2:c.351C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000161944
  ensembl transcript: ENST00000450034
  gene symbol: ASGR2
  hgvsc: ENST00000450034.3:n.703C>T
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000347140
  ensembl transcript: ENST00000355035
  gene symbol: ASGR2
  hgvsc: ENST00000355035.5:c.351C>T
  hgvsp: ENST00000355035.5:c.351C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000458835
  ensembl transcript: ENST00000574868
  gene symbol: ASGR2
  hgvsc: ENST00000574868.1:c.336C>T
  hgvsp: ENST00000574868.1:c.336C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/743
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5404
  bin: 1.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 895
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3668
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 11645
  bin: 2.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 33814
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2454
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1157
  bin: 1.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 831
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3649
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1257
  bin: 9.75e1
  variant carriers: 27
genotype quality: GenotypeQuality
  all individuals: 365
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 12359
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 454
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 343
  bin: 4.75e1
  variant carriers: 0
hgvs: c.351C>T
num of homozygotes: 0
population: Other
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD

17-7011784-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7011784
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7011784
    reference: chr 17
allele count: 2
allele frequency: 4.171011470281543e-5
allele num: 47950
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000405844
  ensembl transcript: ENST00000446679
  gene symbol: ASGR2
  hgvsc: ENST00000446679.2:c.292C>A
  hgvsp: ENSP00000405844.2:p.His98Asn
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000370339
  ensembl transcript: ENST00000380952
  gene symbol: ASGR2
  hgvsc: ENST00000380952.2:c.349C>A
  hgvsp: ENSP00000370339.2:p.His117Asn
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000254850
  ensembl transcript: ENST00000254850
  gene symbol: ASGR2
  hgvsc: ENST00000254850.7:c.277C>A
  hgvsp: ENSP00000254850.7:p.His93Asn
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000347140
  ensembl transcript: ENST00000355035
  gene symbol: ASGR2
  hgvsc: ENST00000355035.5:c.349C>A
  hgvsp: ENSP00000347140.5:p.His117Asn
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000458835
  ensembl transcript: ENST00000574868
  gene symbol: ASGR2
  hgvsc: ENST00000574868.1:c.334C>A
  hgvsp: ENSP00000458835.1:p.His112Asn
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161944
  ensembl transcript: ENST00000450034
  gene symbol: ASGR2
  hgvsc: ENST00000450034.3:n.701C>A
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161944
  ensembl transcript: ENST00000576487
  gene symbol: ASGR2
  hgvsc: ENST00000576487.1:n.646C>A
  variant of: http://identifiers.org/hgnc/743
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1152
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3124
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 888
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33114
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5257
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12923
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2585
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 283
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33316
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1235
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 824
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 381
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 253
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 625
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 376
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 142
  bin: 9.25e1
  variant carriers: 0
hgvs: p.His117Asn
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: Other
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: DP

17-7011785-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7011785
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7011785
    reference: chr 17
allele count: 1
allele frequency: 2.041983174058646e-5
allele num: 48972
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161944
  ensembl transcript: ENST00000450034
  gene symbol: ASGR2
  hgvsc: ENST00000450034.3:n.700C>A
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000458835
  ensembl transcript: ENST00000574868
  gene symbol: ASGR2
  hgvsc: ENST00000574868.1:c.333C>A
  hgvsp: ENST00000574868.1:c.333C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000347140
  ensembl transcript: ENST00000355035
  gene symbol: ASGR2
  hgvsc: ENST00000355035.5:c.348C>A
  hgvsp: ENST00000355035.5:c.348C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161944
  ensembl transcript: ENST00000576487
  gene symbol: ASGR2
  hgvsc: ENST00000576487.1:n.645C>A
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000254850
  ensembl transcript: ENST00000254850
  gene symbol: ASGR2
  hgvsc: ENST00000254850.7:c.276C>A
  hgvsp: ENST00000254850.7:c.276C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000405844
  ensembl transcript: ENST00000446679
  gene symbol: ASGR2
  hgvsc: ENST00000446679.2:c.291C>A
  hgvsp: ENST00000446679.2:c.291C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000370339
  ensembl transcript: ENST00000380952
  gene symbol: ASGR2
  hgvsc: ENST00000380952.2:c.348C>A
  hgvsp: ENST00000380952.2:c.348C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/743
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13332
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2626
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32790
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 887
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5254
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1217
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2937
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 251
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32925
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 279
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2954
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 276
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 352
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 814
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14013
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Thr116Thr
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: African
population: Latino
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum

17-7011791-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7011791
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7011791
    reference: chr 17
allele count: 1
allele frequency: 1.826283877565929e-5
allele num: 54756
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000254850
  ensembl transcript: ENST00000254850
  gene symbol: ASGR2
  hgvsc: ENST00000254850.7:c.270C>T
  hgvsp: ENST00000254850.7:c.270C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000458835
  ensembl transcript: ENST00000574868
  gene symbol: ASGR2
  hgvsc: ENST00000574868.1:c.327C>T
  hgvsp: ENST00000574868.1:c.327C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000370339
  ensembl transcript: ENST00000380952
  gene symbol: ASGR2
  hgvsc: ENST00000380952.2:c.342C>T
  hgvsp: ENST00000380952.2:c.342C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161944
  ensembl transcript: ENST00000576487
  gene symbol: ASGR2
  hgvsc: ENST00000576487.1:n.639C>T
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161944
  ensembl transcript: ENST00000450034
  gene symbol: ASGR2
  hgvsc: ENST00000450034.3:n.694C>T
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000405844
  ensembl transcript: ENST00000446679
  gene symbol: ASGR2
  hgvsc: ENST00000446679.2:c.285C>T
  hgvsp: ENST00000446679.2:c.285C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000347140
  ensembl transcript: ENST00000355035
  gene symbol: ASGR2
  hgvsc: ENST00000355035.5:c.342C>T
  hgvsp: ENST00000355035.5:c.342C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/743
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2172
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15547
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1403
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 921
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5377
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2948
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30678
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 419
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2205
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1459
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16038
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 424
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 495
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 421
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 425
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 667
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Ile114Ile
num of homozygotes: 0
population: East Asian
population: South Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff

17-7011792-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7011792
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7011792
    reference: chr 17
allele count: 1
allele frequency: 1.7892928714572e-5
allele num: 55888
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000347140
  ensembl transcript: ENST00000355035
  gene symbol: ASGR2
  hgvsc: ENST00000355035.5:c.341T>C
  hgvsp: ENSP00000347140.5:p.Ile114Thr
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000405844
  ensembl transcript: ENST00000446679
  gene symbol: ASGR2
  hgvsc: ENST00000446679.2:c.284T>C
  hgvsp: ENSP00000405844.2:p.Ile95Thr
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000458835
  ensembl transcript: ENST00000574868
  gene symbol: ASGR2
  hgvsc: ENST00000574868.1:c.326T>C
  hgvsp: ENSP00000458835.1:p.Ile109Thr
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000370339
  ensembl transcript: ENST00000380952
  gene symbol: ASGR2
  hgvsc: ENST00000380952.2:c.341T>C
  hgvsp: ENSP00000370339.2:p.Ile114Thr
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000254850
  ensembl transcript: ENST00000254850
  gene symbol: ASGR2
  hgvsc: ENST00000254850.7:c.269T>C
  hgvsp: ENSP00000254850.7:p.Ile90Thr
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161944
  ensembl transcript: ENST00000576487
  gene symbol: ASGR2
  hgvsc: ENST00000576487.1:n.638T>C
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161944
  ensembl transcript: ENST00000450034
  gene symbol: ASGR2
  hgvsc: ENST00000450034.3:n.693T>C
  variant of: http://identifiers.org/hgnc/743
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16060
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1346
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30372
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2058
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5333
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2962
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 919
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 249
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 564
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 142
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 294
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 324
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1235
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1826
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 428
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 414
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Ile114Thr
num of homozygotes: 0
population: African
population: Other
population: South Asian
population: Latino
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: A
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: MQ

17-7011795-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7011795
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7011795
    reference: chr 17
allele count: 1
allele frequency: 1.729385722191477e-5
allele num: 57824
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000347140
  ensembl transcript: ENST00000355035
  gene symbol: ASGR2
  hgvsc: ENST00000355035.5:c.338C>T
  hgvsp: ENSP00000347140.5:p.Ala113Val
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000370339
  ensembl transcript: ENST00000380952
  gene symbol: ASGR2
  hgvsc: ENST00000380952.2:c.338C>T
  hgvsp: ENSP00000370339.2:p.Ala113Val
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000405844
  ensembl transcript: ENST00000446679
  gene symbol: ASGR2
  hgvsc: ENST00000446679.2:c.281C>T
  hgvsp: ENSP00000405844.2:p.Ala94Val
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000458835
  ensembl transcript: ENST00000574868
  gene symbol: ASGR2
  hgvsc: ENST00000574868.1:c.323C>T
  hgvsp: ENSP00000458835.1:p.Ala108Val
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161944
  ensembl transcript: ENST00000450034
  gene symbol: ASGR2
  hgvsc: ENST00000450034.3:n.690C>T
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000254850
  ensembl transcript: ENST00000254850
  gene symbol: ASGR2
  hgvsc: ENST00000254850.7:c.266C>T
  hgvsp: ENSP00000254850.7:p.Ala89Val
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161944
  ensembl transcript: ENST00000576487
  gene symbol: ASGR2
  hgvsc: ENST00000576487.1:n.635C>T
  variant of: http://identifiers.org/hgnc/743
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 29545
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16964
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1425
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1828
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3055
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5288
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 945
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1511
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17610
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 325
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1879
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 286
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 436
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 230
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30171
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1822
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Ala113Val
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: African
population: Latino
population: European (Finnish)
population: Other
population: East Asian
reference allele: G
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: QD

17-7011798-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7011798
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7011798
    reference: chr 17
allele count: 36
allele frequency: 5.968565554745009e-4
allele num: 60316
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000370339
  ensembl transcript: ENST00000380952
  gene symbol: ASGR2
  hgvsc: ENST00000380952.2:c.335A>G
  hgvsp: ENSP00000370339.2:p.Gln112Arg
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000347140
  ensembl transcript: ENST00000355035
  gene symbol: ASGR2
  hgvsc: ENST00000355035.5:c.335A>G
  hgvsp: ENSP00000347140.5:p.Gln112Arg
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000405844
  ensembl transcript: ENST00000446679
  gene symbol: ASGR2
  hgvsc: ENST00000446679.2:c.278A>G
  hgvsp: ENSP00000405844.2:p.Gln93Arg
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161944
  ensembl transcript: ENST00000450034
  gene symbol: ASGR2
  hgvsc: ENST00000450034.3:n.687A>G
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000254850
  ensembl transcript: ENST00000254850
  gene symbol: ASGR2
  hgvsc: ENST00000254850.7:c.263A>G
  hgvsp: ENSP00000254850.7:p.Gln88Arg
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000458835
  ensembl transcript: ENST00000574868
  gene symbol: ASGR2
  hgvsc: ENST00000574868.1:c.320A>G
  hgvsp: ENSP00000458835.1:p.Gln107Arg
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161944
  ensembl transcript: ENST00000576487
  gene symbol: ASGR2
  hgvsc: ENST00000576487.1:n.632A>G
  variant of: http://identifiers.org/hgnc/743
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5382
  bin: 1.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 3259
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 6.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28392
  bin: 7.5e0
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1684
  bin: 1.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 5.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 1599
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 969
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 17745
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1826
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 287
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29080
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 480
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 466
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1684
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 437
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 660
  bin: 5.25e1
  variant carriers: 1
hgvs: p.Gln112Arg
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: European (Finnish)
population: Latino
population: African
population: Other
reference allele: T
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum

17-7011806-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7011806
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7011806
    reference: chr 17
allele count: 2
allele frequency: 3.052689419378472e-5
allele num: 65516
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161944
  ensembl transcript: ENST00000450034
  gene symbol: ASGR2
  hgvsc: ENST00000450034.3:n.679G>A
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161944
  ensembl transcript: ENST00000576487
  gene symbol: ASGR2
  hgvsc: ENST00000576487.1:n.624G>A
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000405844
  ensembl transcript: ENST00000446679
  gene symbol: ASGR2
  hgvsc: ENST00000446679.2:c.270G>A
  hgvsp: ENST00000446679.2:c.270G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000347140
  ensembl transcript: ENST00000355035
  gene symbol: ASGR2
  hgvsc: ENST00000355035.5:c.327G>A
  hgvsp: ENST00000355035.5:c.327G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000254850
  ensembl transcript: ENST00000254850
  gene symbol: ASGR2
  hgvsc: ENST00000254850.7:c.255G>A
  hgvsp: ENST00000254850.7:c.255G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000458835
  ensembl transcript: ENST00000574868
  gene symbol: ASGR2
  hgvsc: ENST00000574868.1:c.312G>A
  hgvsp: ENST00000574868.1:c.312G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000370339
  ensembl transcript: ENST00000380952
  gene symbol: ASGR2
  hgvsc: ENST00000380952.2:c.327G>A
  hgvsp: ENST00000380952.2:c.327G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/743
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 26371
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3622
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1233
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1021
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5583
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19313
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1913
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 145
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1237
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1862
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 599
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 464
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 276
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 655
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1707
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 380
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Thr109Thr
num of homozygotes: 0
population: Other
population: South Asian
population: European (Finnish)
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: InbreedingCoeff

17-7011807-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7011807
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7011807
    reference: chr 17
allele count: 4
allele frequency: 6.007449237053947e-5
allele num: 66584
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000405844
  ensembl transcript: ENST00000446679
  gene symbol: ASGR2
  hgvsc: ENST00000446679.2:c.269C>T
  hgvsp: ENSP00000405844.2:p.Thr90Met
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161944
  ensembl transcript: ENST00000576487
  gene symbol: ASGR2
  hgvsc: ENST00000576487.1:n.623C>T
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000370339
  ensembl transcript: ENST00000380952
  gene symbol: ASGR2
  hgvsc: ENST00000380952.2:c.326C>T
  hgvsp: ENSP00000370339.2:p.Thr109Met
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161944
  ensembl transcript: ENST00000450034
  gene symbol: ASGR2
  hgvsc: ENST00000450034.3:n.678C>T
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000254850
  ensembl transcript: ENST00000254850
  gene symbol: ASGR2
  hgvsc: ENST00000254850.7:c.254C>T
  hgvsp: ENSP00000254850.7:p.Thr85Met
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000458835
  ensembl transcript: ENST00000574868
  gene symbol: ASGR2
  hgvsc: ENST00000574868.1:c.311C>T
  hgvsp: ENSP00000458835.1:p.Thr104Met
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000347140
  ensembl transcript: ENST00000355035
  gene symbol: ASGR2
  hgvsc: ENST00000355035.5:c.326C>T
  hgvsp: ENSP00000347140.5:p.Thr109Met
  variant of: http://identifiers.org/hgnc/743
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 19877
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 5572
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1169
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1834
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25901
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1018
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3686
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1846
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 837
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20714
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1701
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1231
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 265
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1700
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 503
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Thr109Met
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: African
population: European (Finnish)
population: Latino
population: Other
reference allele: G
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum

17-7011810-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7011810
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7011810
    reference: chr 17
allele count: 1
allele frequency: 1.461860070754027e-5
allele num: 68406
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161944
  ensembl transcript: ENST00000576487
  gene symbol: ASGR2
  hgvsc: ENST00000576487.1:n.620T>C
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000370339
  ensembl transcript: ENST00000380952
  gene symbol: ASGR2
  hgvsc: ENST00000380952.2:c.323T>C
  hgvsp: ENSP00000370339.2:p.Leu108Pro
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000254850
  ensembl transcript: ENST00000254850
  gene symbol: ASGR2
  hgvsc: ENST00000254850.7:c.251T>C
  hgvsp: ENSP00000254850.7:p.Leu84Pro
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000405844
  ensembl transcript: ENST00000446679
  gene symbol: ASGR2
  hgvsc: ENST00000446679.2:c.266T>C
  hgvsp: ENSP00000405844.2:p.Leu89Pro
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161944
  ensembl transcript: ENST00000450034
  gene symbol: ASGR2
  hgvsc: ENST00000450034.3:n.675T>C
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000347140
  ensembl transcript: ENST00000355035
  gene symbol: ASGR2
  hgvsc: ENST00000355035.5:c.323T>C
  hgvsp: ENSP00000347140.5:p.Leu108Pro
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000458835
  ensembl transcript: ENST00000574868
  gene symbol: ASGR2
  hgvsc: ENST00000574868.1:c.308T>C
  hgvsp: ENSP00000458835.1:p.Leu103Pro
  variant of: http://identifiers.org/hgnc/743
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1016
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2007
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5719
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25129
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1077
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20323
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3791
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1773
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1877
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 722
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1004
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1128
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 137
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 468
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1236
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Leu108Pro
num of homozygotes: 0
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Latino
population: East Asian
population: Other
reference allele: A
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: DP

17-7011815-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7011815
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7011815
    reference: chr 17
allele count: 1
allele frequency: 1.407340689034001e-5
allele num: 71056
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000370339
  ensembl transcript: ENST00000380952
  gene symbol: ASGR2
  hgvsc: ENST00000380952.2:c.318C>T
  hgvsp: ENST00000380952.2:c.318C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161944
  ensembl transcript: ENST00000576487
  gene symbol: ASGR2
  hgvsc: ENST00000576487.1:n.615C>T
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000405844
  ensembl transcript: ENST00000446679
  gene symbol: ASGR2
  hgvsc: ENST00000446679.2:c.261C>T
  hgvsp: ENST00000446679.2:c.261C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000254850
  ensembl transcript: ENST00000254850
  gene symbol: ASGR2
  hgvsc: ENST00000254850.7:c.246C>T
  hgvsp: ENST00000254850.7:c.246C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161944
  ensembl transcript: ENST00000450034
  gene symbol: ASGR2
  hgvsc: ENST00000450034.3:n.670C>T
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000347140
  ensembl transcript: ENST00000355035
  gene symbol: ASGR2
  hgvsc: ENST00000355035.5:c.318C>T
  hgvsp: ENST00000355035.5:c.318C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000458835
  ensembl transcript: ENST00000574868
  gene symbol: ASGR2
  hgvsc: ENST00000574868.1:c.303C>T
  hgvsp: ENST00000574868.1:c.303C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/743
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5835
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21326
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3980
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 951
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1924
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24017
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1029
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 111
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 848
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 443
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 144
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 269
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 233
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22119
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1910
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Ser106Ser
num of homozygotes: 0
population: Latino
population: African
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: East Asian
reference allele: G
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff

17-7011818-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7011818
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7011818
    reference: chr 17
allele count: 41
allele frequency: 5.65673289183223e-4
allele num: 72480
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000370339
  ensembl transcript: ENST00000380952
  gene symbol: ASGR2
  hgvsc: ENST00000380952.2:c.315G>A
  hgvsp: ENST00000380952.2:c.315G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000405844
  ensembl transcript: ENST00000446679
  gene symbol: ASGR2
  hgvsc: ENST00000446679.2:c.258G>A
  hgvsp: ENST00000446679.2:c.258G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000347140
  ensembl transcript: ENST00000355035
  gene symbol: ASGR2
  hgvsc: ENST00000355035.5:c.315G>A
  hgvsp: ENST00000355035.5:c.315G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161944
  ensembl transcript: ENST00000450034
  gene symbol: ASGR2
  hgvsc: ENST00000450034.3:n.667G>A
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000458835
  ensembl transcript: ENST00000574868
  gene symbol: ASGR2
  hgvsc: ENST00000574868.1:c.300G>A
  hgvsp: ENST00000574868.1:c.300G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161944
  ensembl transcript: ENST00000576487
  gene symbol: ASGR2
  hgvsc: ENST00000576487.1:n.612G>A
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000254850
  ensembl transcript: ENST00000254850
  gene symbol: ASGR2
  hgvsc: ENST00000254850.7:c.243G>A
  hgvsp: ENST00000254850.7:c.243G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/743
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4153
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1963
  bin: 1.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 897
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 6.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 4.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1038
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5988
  bin: 1.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 23236
  bin: 7.5e0
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 21765
  bin: 2.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 6.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 441
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 165
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 469
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 545
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 979
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 570
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1921
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22559
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 869
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Ser105Ser
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: African
population: Latino
population: Other
reference allele: C
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum

17-7011819-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7011819
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7011819
    reference: chr 17
allele count: 2
allele frequency: 2.72985367984276e-5
allele num: 73264
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161944
  ensembl transcript: ENST00000450034
  gene symbol: ASGR2
  hgvsc: ENST00000450034.3:n.666C>T
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000405844
  ensembl transcript: ENST00000446679
  gene symbol: ASGR2
  hgvsc: ENST00000446679.2:c.257C>T
  hgvsp: ENSP00000405844.2:p.Ser86Leu
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161944
  ensembl transcript: ENST00000576487
  gene symbol: ASGR2
  hgvsc: ENST00000576487.1:n.611C>T
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000458835
  ensembl transcript: ENST00000574868
  gene symbol: ASGR2
  hgvsc: ENST00000574868.1:c.299C>T
  hgvsp: ENSP00000458835.1:p.Ser100Leu
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000370339
  ensembl transcript: ENST00000380952
  gene symbol: ASGR2
  hgvsc: ENST00000380952.2:c.314C>T
  hgvsp: ENSP00000370339.2:p.Ser105Leu
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000347140
  ensembl transcript: ENST00000355035
  gene symbol: ASGR2
  hgvsc: ENST00000355035.5:c.314C>T
  hgvsp: ENSP00000347140.5:p.Ser105Leu
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000254850
  ensembl transcript: ENST00000254850
  gene symbol: ASGR2
  hgvsc: ENST00000254850.7:c.242C>T
  hgvsp: ENSP00000254850.7:p.Ser81Leu
  variant of: http://identifiers.org/hgnc/743
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 871
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1924
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22871
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22075
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 399
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1046
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6044
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4217
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1235
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 24668
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 446
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1810
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 854
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 807
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 266
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 469
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 954
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Ser105Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: African
population: South Asian
population: European (Finnish)
population: Other
population: Latino
reference allele: G
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum

17-7011822-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7011822
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7011822
    reference: chr 17
allele count: 1
allele frequency: 1.33155792276964e-5
allele num: 75100
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000370339
  ensembl transcript: ENST00000380952
  gene symbol: ASGR2
  hgvsc: ENST00000380952.2:c.311C>T
  hgvsp: ENSP00000370339.2:p.Ser104Phe
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000254850
  ensembl transcript: ENST00000254850
  gene symbol: ASGR2
  hgvsc: ENST00000254850.7:c.239C>T
  hgvsp: ENSP00000254850.7:p.Ser80Phe
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161944
  ensembl transcript: ENST00000576487
  gene symbol: ASGR2
  hgvsc: ENST00000576487.1:n.608C>T
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161944
  ensembl transcript: ENST00000450034
  gene symbol: ASGR2
  hgvsc: ENST00000450034.3:n.663C>T
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000347140
  ensembl transcript: ENST00000355035
  gene symbol: ASGR2
  hgvsc: ENST00000355035.5:c.311C>T
  hgvsp: ENSP00000347140.5:p.Ser104Phe
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000458835
  ensembl transcript: ENST00000574868
  gene symbol: ASGR2
  hgvsc: ENST00000574868.1:c.296C>T
  hgvsp: ENSP00000458835.1:p.Ser99Phe
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000405844
  ensembl transcript: ENST00000446679
  gene symbol: ASGR2
  hgvsc: ENST00000446679.2:c.254C>T
  hgvsp: ENSP00000405844.2:p.Ser85Phe
  variant of: http://identifiers.org/hgnc/743
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22589
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22154
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 794
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4342
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1042
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6274
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1869
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 705
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 885
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1967
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 399
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1851
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 463
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1833
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24150
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 217
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Ser104Phe
num of homozygotes: 0
population: Other
population: European (Finnish)
population: African
population: Latino
population: East Asian
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD

17-7011822-GAGA-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7011822
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7011819
    reference: chr 17
allele count: 2
allele frequency: 2.663115845539281e-5
allele num: 75100
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000405844
  ensembl transcript: ENST00000446679
  gene symbol: ASGR2
  hgvsc: ENST00000446679.2:c.251_253delTCT
  hgvsp: ENSP00000405844.2:p.Phe84del
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000254850
  ensembl transcript: ENST00000254850
  gene symbol: ASGR2
  hgvsc: ENST00000254850.7:c.236_238delTCT
  hgvsp: ENSP00000254850.7:p.Phe79del
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161944
  ensembl transcript: ENST00000576487
  gene symbol: ASGR2
  hgvsc: ENST00000576487.1:n.605_607delTCT
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000458835
  ensembl transcript: ENST00000574868
  gene symbol: ASGR2
  hgvsc: ENST00000574868.1:c.293_295delTCT
  hgvsp: ENSP00000458835.1:p.Phe98del
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161944
  ensembl transcript: ENST00000450034
  gene symbol: ASGR2
  hgvsc: ENST00000450034.3:n.660_662delTCT
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000347140
  ensembl transcript: ENST00000355035
  gene symbol: ASGR2
  hgvsc: ENST00000355035.5:c.308_310delTCT
  hgvsp: ENSP00000347140.5:p.Phe103del
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: true
  consequence: inframe_deletion
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000370339
  ensembl transcript: ENST00000380952
  gene symbol: ASGR2
  hgvsc: ENST00000380952.2:c.308_310delTCT
  hgvsp: ENSP00000370339.2:p.Phe103del
  variant of: http://identifiers.org/hgnc/743
canonical: true
consequence: inframe deletion
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6274
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4342
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22154
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22589
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1042
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 794
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1869
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 858
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23875
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1967
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 453
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 446
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24150
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 287
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 463
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Phe103del
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
population: Other
reference allele: GAGA
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum

17-7011825-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7011825
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7011825
    reference: chr 17
allele count: 16
allele frequency: 2.106649111257406e-4
allele num: 75950
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000254850
  ensembl transcript: ENST00000254850
  gene symbol: ASGR2
  hgvsc: ENST00000254850.7:c.236T>C
  hgvsp: ENSP00000254850.7:p.Phe79Ser
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161944
  ensembl transcript: ENST00000450034
  gene symbol: ASGR2
  hgvsc: ENST00000450034.3:n.660T>C
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000370339
  ensembl transcript: ENST00000380952
  gene symbol: ASGR2
  hgvsc: ENST00000380952.2:c.308T>C
  hgvsp: ENSP00000370339.2:p.Phe103Ser
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000458835
  ensembl transcript: ENST00000574868
  gene symbol: ASGR2
  hgvsc: ENST00000574868.1:c.293T>C
  hgvsp: ENSP00000458835.1:p.Phe98Ser
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161944
  ensembl transcript: ENST00000576487
  gene symbol: ASGR2
  hgvsc: ENST00000576487.1:n.605T>C
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000347140
  ensembl transcript: ENST00000355035
  gene symbol: ASGR2
  hgvsc: ENST00000355035.5:c.308T>C
  hgvsp: ENSP00000347140.5:p.Phe103Ser
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000405844
  ensembl transcript: ENST00000446679
  gene symbol: ASGR2
  hgvsc: ENST00000446679.2:c.251T>C
  hgvsp: ENSP00000405844.2:p.Phe84Ser
  variant of: http://identifiers.org/hgnc/743
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 21895
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4495
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21825
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1039
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2166
  bin: 1.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 779
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6861
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1153
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 142
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2164
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1842
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 843
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23941
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 440
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 219
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1085
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Phe103Ser
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: East Asian
population: South Asian
population: African
reference allele: A
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: MQ

17-7011826-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7011826
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7011826
    reference: chr 17
allele count: 6
allele frequency: 7.874222420535972e-5
allele num: 76198
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000370339
  ensembl transcript: ENST00000380952
  gene symbol: ASGR2
  hgvsc: ENST00000380952.2:c.307T>C
  hgvsp: ENSP00000370339.2:p.Phe103Leu
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161944
  ensembl transcript: ENST00000576487
  gene symbol: ASGR2
  hgvsc: ENST00000576487.1:n.604T>C
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000405844
  ensembl transcript: ENST00000446679
  gene symbol: ASGR2
  hgvsc: ENST00000446679.2:c.250T>C
  hgvsp: ENSP00000405844.2:p.Phe84Leu
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000458835
  ensembl transcript: ENST00000574868
  gene symbol: ASGR2
  hgvsc: ENST00000574868.1:c.292T>C
  hgvsp: ENSP00000458835.1:p.Phe98Leu
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000254850
  ensembl transcript: ENST00000254850
  gene symbol: ASGR2
  hgvsc: ENST00000254850.7:c.235T>C
  hgvsp: ENSP00000254850.7:p.Phe79Leu
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161944
  ensembl transcript: ENST00000450034
  gene symbol: ASGR2
  hgvsc: ENST00000450034.3:n.659T>C
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000347140
  ensembl transcript: ENST00000355035
  gene symbol: ASGR2
  hgvsc: ENST00000355035.5:c.307T>C
  hgvsp: ENSP00000347140.5:p.Phe103Leu
  variant of: http://identifiers.org/hgnc/743
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 766
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2128
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1047
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6860
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4517
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21698
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22049
  bin: 2.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 335
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 529
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 818
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 262
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 806
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 141
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1030
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Phe103Leu
num of homozygotes: 0
population: Other
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Latino
population: African
population: South Asian
reference allele: A
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum

17-7011827-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7011827
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7011827
    reference: chr 17
allele count: 1
allele frequency: 1.307633967099929e-5
allele num: 76474
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000458835
  ensembl transcript: ENST00000574868
  gene symbol: ASGR2
  hgvsc: ENST00000574868.1:c.291C>T
  hgvsp: ENST00000574868.1:c.291C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000347140
  ensembl transcript: ENST00000355035
  gene symbol: ASGR2
  hgvsc: ENST00000355035.5:c.306C>T
  hgvsp: ENST00000355035.5:c.306C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000405844
  ensembl transcript: ENST00000446679
  gene symbol: ASGR2
  hgvsc: ENST00000446679.2:c.249C>T
  hgvsp: ENST00000446679.2:c.249C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161944
  ensembl transcript: ENST00000450034
  gene symbol: ASGR2
  hgvsc: ENST00000450034.3:n.658C>T
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161944
  ensembl transcript: ENST00000576487
  gene symbol: ASGR2
  hgvsc: ENST00000576487.1:n.603C>T
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000370339
  ensembl transcript: ENST00000380952
  gene symbol: ASGR2
  hgvsc: ENST00000380952.2:c.306C>T
  hgvsp: ENST00000380952.2:c.306C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000254850
  ensembl transcript: ENST00000254850
  gene symbol: ASGR2
  hgvsc: ENST00000254850.7:c.234C>T
  hgvsp: ENST00000254850.7:c.234C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/743
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2100
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22172
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4551
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21576
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 759
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6856
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1050
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 818
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23857
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2058
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 214
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1018
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 438
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2157
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 470
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Asn102Asn
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: DP

17-7011832-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7011832
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7011832
    reference: chr 17
allele count: 1
allele frequency: 1.286603880397303e-5
allele num: 77724
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000254850
  ensembl transcript: ENST00000254850
  gene symbol: ASGR2
  hgvsc: ENST00000254850.7:c.229A>T
  hgvsp: ENSP00000254850.7:p.Ser77Cys
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161944
  ensembl transcript: ENST00000576487
  gene symbol: ASGR2
  hgvsc: ENST00000576487.1:n.598A>T
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000405844
  ensembl transcript: ENST00000446679
  gene symbol: ASGR2
  hgvsc: ENST00000446679.2:c.244A>T
  hgvsp: ENSP00000405844.2:p.Ser82Cys
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000347140
  ensembl transcript: ENST00000355035
  gene symbol: ASGR2
  hgvsc: ENST00000355035.5:c.301A>T
  hgvsp: ENSP00000347140.5:p.Ser101Cys
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000370339
  ensembl transcript: ENST00000380952
  gene symbol: ASGR2
  hgvsc: ENST00000380952.2:c.301A>T
  hgvsp: ENSP00000370339.2:p.Ser101Cys
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000458835
  ensembl transcript: ENST00000574868
  gene symbol: ASGR2
  hgvsc: ENST00000574868.1:c.286A>T
  hgvsp: ENSP00000458835.1:p.Ser96Cys
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161944
  ensembl transcript: ENST00000450034
  gene symbol: ASGR2
  hgvsc: ENST00000450034.3:n.653A>T
  variant of: http://identifiers.org/hgnc/743
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2470
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20963
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 718
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1050
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7543
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4755
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21566
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 276
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 464
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1841
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 793
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 138
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2355
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 256
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 366
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Ser101Cys
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Latino
population: Other
population: South Asian
reference allele: T
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: FS
site quality: ReadPosRankSum

17-7011837-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7011837
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7011837
    reference: chr 17
allele count: 0
allele frequency: 0.0e0
allele num: 78066
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161944
  ensembl transcript: ENST00000450034
  gene symbol: ASGR2
  hgvsc: ENST00000450034.3:n.648C>G
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000370339
  ensembl transcript: ENST00000380952
  gene symbol: ASGR2
  hgvsc: ENST00000380952.2:c.296C>G
  hgvsp: ENSP00000370339.2:p.Ala99Gly
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000254850
  ensembl transcript: ENST00000254850
  gene symbol: ASGR2
  hgvsc: ENST00000254850.7:c.224C>G
  hgvsp: ENSP00000254850.7:p.Ala75Gly
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000405844
  ensembl transcript: ENST00000446679
  gene symbol: ASGR2
  hgvsc: ENST00000446679.2:c.239C>G
  hgvsp: ENSP00000405844.2:p.Ala80Gly
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000458835
  ensembl transcript: ENST00000574868
  gene symbol: ASGR2
  hgvsc: ENST00000574868.1:c.281C>G
  hgvsp: ENSP00000458835.1:p.Ala94Gly
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161944
  ensembl transcript: ENST00000576487
  gene symbol: ASGR2
  hgvsc: ENST00000576487.1:n.593C>G
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000347140
  ensembl transcript: ENST00000355035
  gene symbol: ASGR2
  hgvsc: ENST00000355035.5:c.296C>G
  hgvsp: ENSP00000347140.5:p.Ala99Gly
  variant of: http://identifiers.org/hgnc/743
canonical: true
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 765
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4886
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1064
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20654
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8898
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3404
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19391
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 872
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 137
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 366
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2734
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 551
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 410
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 732
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23632
  bin: 2.25e1
  variant carriers: 1
hgvs: p.Ala99Gly
num of homozygotes: 0
population: South Asian
population: Other
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: DP

17-7011838-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7011838
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7011838
    reference: chr 17
allele count: 1
allele frequency: 1.277139208173691e-5
allele num: 78300
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000347140
  ensembl transcript: ENST00000355035
  gene symbol: ASGR2
  hgvsc: ENST00000355035.5:c.295G>C
  hgvsp: ENSP00000347140.5:p.Ala99Pro
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161944
  ensembl transcript: ENST00000576487
  gene symbol: ASGR2
  hgvsc: ENST00000576487.1:n.592G>C
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000370339
  ensembl transcript: ENST00000380952
  gene symbol: ASGR2
  hgvsc: ENST00000380952.2:c.295G>C
  hgvsp: ENSP00000370339.2:p.Ala99Pro
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161944
  ensembl transcript: ENST00000450034
  gene symbol: ASGR2
  hgvsc: ENST00000450034.3:n.647G>C
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000458835
  ensembl transcript: ENST00000574868
  gene symbol: ASGR2
  hgvsc: ENST00000574868.1:c.280G>C
  hgvsp: ENSP00000458835.1:p.Ala94Pro
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000405844
  ensembl transcript: ENST00000446679
  gene symbol: ASGR2
  hgvsc: ENST00000446679.2:c.238G>C
  hgvsp: ENSP00000405844.2:p.Ala80Pro
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000254850
  ensembl transcript: ENST00000254850
  gene symbol: ASGR2
  hgvsc: ENST00000254850.7:c.223G>C
  hgvsp: ENSP00000254850.7:p.Ala75Pro
  variant of: http://identifiers.org/hgnc/743
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20539
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 757
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19425
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3370
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4939
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8953
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1078
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 856
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20752
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2832
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 349
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 388
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1234
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1538
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Ala99Pro
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Latino
population: African
population: European (Finnish)
population: Other
reference allele: C
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: DP

17-7011840-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7011840
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7011840
    reference: chr 17
allele count: 1
allele frequency: 1.277139208173691e-5
allele num: 78300
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000458835
  ensembl transcript: ENST00000574868
  gene symbol: ASGR2
  hgvsc: ENST00000574868.1:c.278A>G
  hgvsp: ENSP00000458835.1:p.Glu93Gly
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000347140
  ensembl transcript: ENST00000355035
  gene symbol: ASGR2
  hgvsc: ENST00000355035.5:c.293A>G
  hgvsp: ENSP00000347140.5:p.Glu98Gly
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000254850
  ensembl transcript: ENST00000254850
  gene symbol: ASGR2
  hgvsc: ENST00000254850.7:c.221A>G
  hgvsp: ENSP00000254850.7:p.Glu74Gly
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161944
  ensembl transcript: ENST00000576487
  gene symbol: ASGR2
  hgvsc: ENST00000576487.1:n.590A>G
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000405844
  ensembl transcript: ENST00000446679
  gene symbol: ASGR2
  hgvsc: ENST00000446679.2:c.236A>G
  hgvsp: ENSP00000405844.2:p.Glu79Gly
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161944
  ensembl transcript: ENST00000450034
  gene symbol: ASGR2
  hgvsc: ENST00000450034.3:n.645A>G
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000370339
  ensembl transcript: ENST00000380952
  gene symbol: ASGR2
  hgvsc: ENST00000380952.2:c.293A>G
  hgvsp: ENSP00000370339.2:p.Glu98Gly
  variant of: http://identifiers.org/hgnc/743
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 812
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3927
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5024
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17946
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20471
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9819
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1062
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1583
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 410
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3185
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 624
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1305
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1041
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 898
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Glu98Gly
num of homozygotes: 0
population: Latino
population: African
population: South Asian
population: Other
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum

17-7011853-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7011853
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7011853
    reference: chr 17
allele count: 3
allele frequency: 3.782434374763598e-5
allele num: 79314
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000458835
  ensembl transcript: ENST00000574868
  gene symbol: ASGR2
  hgvsc: ENST00000574868.1:c.265C>T
  hgvsp: ENSP00000458835.1:p.Arg89Trp
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161944
  ensembl transcript: ENST00000450034
  gene symbol: ASGR2
  hgvsc: ENST00000450034.3:n.632C>T
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000254850
  ensembl transcript: ENST00000254850
  gene symbol: ASGR2
  hgvsc: ENST00000254850.7:c.208C>T
  hgvsp: ENSP00000254850.7:p.Arg70Trp
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000370339
  ensembl transcript: ENST00000380952
  gene symbol: ASGR2
  hgvsc: ENST00000380952.2:c.280C>T
  hgvsp: ENSP00000370339.2:p.Arg94Trp
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000405844
  ensembl transcript: ENST00000446679
  gene symbol: ASGR2
  hgvsc: ENST00000446679.2:c.223C>T
  hgvsp: ENSP00000405844.2:p.Arg75Trp
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000347140
  ensembl transcript: ENST00000355035
  gene symbol: ASGR2
  hgvsc: ENST00000355035.5:c.280C>T
  hgvsp: ENSP00000347140.5:p.Arg94Trp
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161944
  ensembl transcript: ENST00000576487
  gene symbol: ASGR2
  hgvsc: ENST00000576487.1:n.577C>T
  variant of: http://identifiers.org/hgnc/743
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15411
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4490
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5459
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19666
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1026
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 899
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12098
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3745
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2319
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1495
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 536
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 190
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 953
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 374
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1085
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Arg94Trp
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: South Asian
population: African
population: European (Non-Finnish)
population: Other
population: East Asian
reference allele: G
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ

17-7011853-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7011853
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7011853
    reference: chr 17
allele count: 1
allele frequency: 1.260811458254533e-5
allele num: 79314
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000458835
  ensembl transcript: ENST00000574868
  gene symbol: ASGR2
  hgvsc: ENST00000574868.1:c.265C>G
  hgvsp: ENSP00000458835.1:p.Arg89Gly
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161944
  ensembl transcript: ENST00000576487
  gene symbol: ASGR2
  hgvsc: ENST00000576487.1:n.577C>G
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000370339
  ensembl transcript: ENST00000380952
  gene symbol: ASGR2
  hgvsc: ENST00000380952.2:c.280C>G
  hgvsp: ENSP00000370339.2:p.Arg94Gly
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000405844
  ensembl transcript: ENST00000446679
  gene symbol: ASGR2
  hgvsc: ENST00000446679.2:c.223C>G
  hgvsp: ENSP00000405844.2:p.Arg75Gly
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000254850
  ensembl transcript: ENST00000254850
  gene symbol: ASGR2
  hgvsc: ENST00000254850.7:c.208C>G
  hgvsp: ENSP00000254850.7:p.Arg70Gly
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000347140
  ensembl transcript: ENST00000355035
  gene symbol: ASGR2
  hgvsc: ENST00000355035.5:c.280C>G
  hgvsp: ENSP00000347140.5:p.Arg94Gly
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161944
  ensembl transcript: ENST00000450034
  gene symbol: ASGR2
  hgvsc: ENST00000450034.3:n.632C>G
  variant of: http://identifiers.org/hgnc/743
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15411
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4490
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12098
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19666
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 899
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5459
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1026
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3745
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 536
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1495
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 824
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 374
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23996
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 913
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2319
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 190
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Arg94Gly
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: African
population: Other
population: Latino
population: European (Finnish)
reference allele: G
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum

17-7011860-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7011860
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7011860
    reference: chr 17
allele count: 1
allele frequency: 1.253698410310416e-5
allele num: 79764
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161944
  ensembl transcript: ENST00000450034
  gene symbol: ASGR2
  hgvsc: ENST00000450034.3:n.625C>T
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000458835
  ensembl transcript: ENST00000574868
  gene symbol: ASGR2
  hgvsc: ENST00000574868.1:c.258C>T
  hgvsp: ENST00000574868.1:c.258C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161944
  ensembl transcript: ENST00000576487
  gene symbol: ASGR2
  hgvsc: ENST00000576487.1:n.570C>T
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000254850
  ensembl transcript: ENST00000254850
  gene symbol: ASGR2
  hgvsc: ENST00000254850.7:c.201C>T
  hgvsp: ENST00000254850.7:c.201C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000405844
  ensembl transcript: ENST00000446679
  gene symbol: ASGR2
  hgvsc: ENST00000446679.2:c.216C>T
  hgvsp: ENST00000446679.2:c.216C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000370339
  ensembl transcript: ENST00000380952
  gene symbol: ASGR2
  hgvsc: ENST00000380952.2:c.273C>T
  hgvsp: ENST00000380952.2:c.273C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000347140
  ensembl transcript: ENST00000355035
  gene symbol: ASGR2
  hgvsc: ENST00000355035.5:c.273C>T
  hgvsp: ENST00000355035.5:c.273C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/743
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13348
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19365
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6140
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4004
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 984
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 964
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14248
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 170
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4573
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1085
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 630
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 356
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 392
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1098
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23882
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 928
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Ala91Ala
num of homozygotes: 0
population: Other
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Latino
population: African
reference allele: G
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQ

17-7011865-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7011865
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7011865
    reference: chr 17
allele count: 1
allele frequency: 1.247847463126108e-5
allele num: 80138
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000405844
  ensembl transcript: ENST00000446679
  gene symbol: ASGR2
  hgvsc: ENST00000446679.2:c.211C>A
  hgvsp: ENSP00000405844.2:p.Gln71Lys
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161944
  ensembl transcript: ENST00000450034
  gene symbol: ASGR2
  hgvsc: ENST00000450034.3:n.620C>A
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000458835
  ensembl transcript: ENST00000574868
  gene symbol: ASGR2
  hgvsc: ENST00000574868.1:c.253C>A
  hgvsp: ENSP00000458835.1:p.Gln85Lys
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000347140
  ensembl transcript: ENST00000355035
  gene symbol: ASGR2
  hgvsc: ENST00000355035.5:c.268C>A
  hgvsp: ENSP00000347140.5:p.Gln90Lys
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000370339
  ensembl transcript: ENST00000380952
  gene symbol: ASGR2
  hgvsc: ENST00000380952.2:c.268C>A
  hgvsp: ENSP00000370339.2:p.Gln90Lys
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000254850
  ensembl transcript: ENST00000254850
  gene symbol: ASGR2
  hgvsc: ENST00000254850.7:c.196C>A
  hgvsp: ENSP00000254850.7:p.Gln66Lys
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161944
  ensembl transcript: ENST00000576487
  gene symbol: ASGR2
  hgvsc: ENST00000576487.1:n.565C>A
  variant of: http://identifiers.org/hgnc/743
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13848
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3703
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13934
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19201
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6429
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1020
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 921
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4396
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2764
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 137
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 992
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1205
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 379
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1110
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 388
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Gln90Lys
num of homozygotes: 0
population: Other
population: Latino
population: East Asian
population: European (Non-Finnish)
population: African
population: South Asian
population: European (Finnish)
reference allele: G
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum

17-7011869-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7011869
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7011869
    reference: chr 17
allele count: 1
allele frequency: 1.238788959912789e-5
allele num: 80724
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000254850
  ensembl transcript: ENST00000254850
  gene symbol: ASGR2
  hgvsc: ENST00000254850.7:c.192G>A
  hgvsp: ENST00000254850.7:c.192G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000458835
  ensembl transcript: ENST00000574868
  gene symbol: ASGR2
  hgvsc: ENST00000574868.1:c.249G>A
  hgvsp: ENST00000574868.1:c.249G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000370339
  ensembl transcript: ENST00000380952
  gene symbol: ASGR2
  hgvsc: ENST00000380952.2:c.264G>A
  hgvsp: ENST00000380952.2:c.264G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161944
  ensembl transcript: ENST00000576487
  gene symbol: ASGR2
  hgvsc: ENST00000576487.1:n.561G>A
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000405844
  ensembl transcript: ENST00000446679
  gene symbol: ASGR2
  hgvsc: ENST00000446679.2:c.207G>A
  hgvsp: ENST00000446679.2:c.207G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000347140
  ensembl transcript: ENST00000355035
  gene symbol: ASGR2
  hgvsc: ENST00000355035.5:c.264G>A
  hgvsp: ENST00000355035.5:c.264G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161944
  ensembl transcript: ENST00000450034
  gene symbol: ASGR2
  hgvsc: ENST00000450034.3:n.616G>A
  variant of: http://identifiers.org/hgnc/743
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6403
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13729
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3688
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14348
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1001
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18982
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 906
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5032
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 373
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4541
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 914
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 149
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2801
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 244
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 855
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 592
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Gln88Gln
num of homozygotes: 0
population: South Asian
population: Other
population: Latino
population: East Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
reference allele: C
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: MQ

17-7011871-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7011871
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7011871
    reference: chr 17
allele count: 1
allele frequency: 1.240048609905508e-5
allele num: 80642
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000254850
  ensembl transcript: ENST00000254850
  gene symbol: ASGR2
  hgvsc: ENST00000254850.7:c.190C>A
  hgvsp: ENSP00000254850.7:p.Gln64Lys
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000347140
  ensembl transcript: ENST00000355035
  gene symbol: ASGR2
  hgvsc: ENST00000355035.5:c.262C>A
  hgvsp: ENSP00000347140.5:p.Gln88Lys
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000458835
  ensembl transcript: ENST00000574868
  gene symbol: ASGR2
  hgvsc: ENST00000574868.1:c.247C>A
  hgvsp: ENSP00000458835.1:p.Gln83Lys
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161944
  ensembl transcript: ENST00000576487
  gene symbol: ASGR2
  hgvsc: ENST00000576487.1:n.559C>A
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000405844
  ensembl transcript: ENST00000446679
  gene symbol: ASGR2
  hgvsc: ENST00000446679.2:c.205C>A
  hgvsp: ENSP00000405844.2:p.Gln69Lys
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000370339
  ensembl transcript: ENST00000380952
  gene symbol: ASGR2
  hgvsc: ENST00000380952.2:c.262C>A
  hgvsp: ENSP00000370339.2:p.Gln88Lys
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000161944
  ensembl transcript: ENST00000450034
  gene symbol: ASGR2
  hgvsc: ENST00000450034.3:n.614C>A
  variant of: http://identifiers.org/hgnc/743
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6781
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1036
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14719
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13103
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18923
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 900
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3598
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1233
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 24017
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 241
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 663
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4662
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2946
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1334
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 166
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 486
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Gln88Lys
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: East Asian
population: South Asian
population: Latino
reference allele: G
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: ClippingRankSum

17-7011885-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7011885
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7011885
    reference: chr 17
allele count: 1
allele frequency: 1.222972311906858e-5
allele num: 81768
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000405844
  ensembl transcript: ENST00000446679
  gene symbol: ASGR2
  hgvsc: ENST00000446679.2:c.200-9C>T
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000254850
  ensembl transcript: ENST00000254850
  gene symbol: ASGR2
  hgvsc: ENST00000254850.7:c.185-9C>T
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000370339
  ensembl transcript: ENST00000380952
  gene symbol: ASGR2
  hgvsc: ENST00000380952.2:c.257-9C>T
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl transcript: ENST00000450034
  gene symbol: ASGR2
  hgvsc: ENST00000450034.3:n.609-9C>T
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000347140
  ensembl transcript: ENST00000355035
  gene symbol: ASGR2
  hgvsc: ENST00000355035.5:c.257-9C>T
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000458835
  ensembl transcript: ENST00000574868
  gene symbol: ASGR2
  hgvsc: ENST00000574868.1:c.242-9C>T
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl transcript: ENST00000576487
  gene symbol: ASGR2
  hgvsc: ENST00000576487.1:n.554-9C>T
  variant of: http://identifiers.org/hgnc/743
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8272
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3401
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11052
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16091
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1163
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18230
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 863
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 805
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5246
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1302
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 237
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6053
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11338
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3503
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 372
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1425
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1139
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: Other
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP

17-7011887-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7011887
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7011887
    reference: chr 17
allele count: 1
allele frequency: 1.223900325557487e-5
allele num: 81706
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl transcript: ENST00000450034
  gene symbol: ASGR2
  hgvsc: ENST00000450034.3:n.609-11C>G
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000254850
  ensembl transcript: ENST00000254850
  gene symbol: ASGR2
  hgvsc: ENST00000254850.7:c.185-11C>G
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000458835
  ensembl transcript: ENST00000574868
  gene symbol: ASGR2
  hgvsc: ENST00000574868.1:c.242-11C>G
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000405844
  ensembl transcript: ENST00000446679
  gene symbol: ASGR2
  hgvsc: ENST00000446679.2:c.200-11C>G
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000370339
  ensembl transcript: ENST00000380952
  gene symbol: ASGR2
  hgvsc: ENST00000380952.2:c.257-11C>G
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000347140
  ensembl transcript: ENST00000355035
  gene symbol: ASGR2
  hgvsc: ENST00000355035.5:c.257-11C>G
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl transcript: ENST00000576487
  gene symbol: ASGR2
  hgvsc: ENST00000576487.1:n.554-11C>G
  variant of: http://identifiers.org/hgnc/743
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16281
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8635
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3341
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18128
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 879
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1176
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10632
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1336
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 205
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6191
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1479
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1486
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3629
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 911
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 914
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1286
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 238
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: Other
population: Latino
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: ClippingRankSum

17-7011897-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7011897
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7011897
    reference: chr 17
allele count: 1
allele frequency: 1.22955858846674e-5
allele num: 81330
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl transcript: ENST00000450034
  gene symbol: ASGR2
  hgvsc: ENST00000450034.3:n.609-21C>T
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl transcript: ENST00000576487
  gene symbol: ASGR2
  hgvsc: ENST00000576487.1:n.554-21C>T
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000370339
  ensembl transcript: ENST00000380952
  gene symbol: ASGR2
  hgvsc: ENST00000380952.2:c.257-21C>T
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000254850
  ensembl transcript: ENST00000254850
  gene symbol: ASGR2
  hgvsc: ENST00000254850.7:c.185-21C>T
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000347140
  ensembl transcript: ENST00000355035
  gene symbol: ASGR2
  hgvsc: ENST00000355035.5:c.257-21C>T
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000405844
  ensembl transcript: ENST00000446679
  gene symbol: ASGR2
  hgvsc: ENST00000446679.2:c.200-21C>T
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000458835
  ensembl transcript: ENST00000574868
  gene symbol: ASGR2
  hgvsc: ENST00000574868.1:c.242-21C>T
  variant of: http://identifiers.org/hgnc/743
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9717
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1204
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16775
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 880
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17783
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9474
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3231
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 139
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2597
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1231
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1600
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21483
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7895
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5491
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4185
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1813
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 354
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: European (Finnish)
population: South Asian
population: Latino
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ

17-7011897-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7011897
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7011897
    reference: chr 17
allele count: 1
allele frequency: 1.22955858846674e-5
allele num: 81330
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl transcript: ENST00000576487
  gene symbol: ASGR2
  hgvsc: ENST00000576487.1:n.554-21C>A
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl transcript: ENST00000450034
  gene symbol: ASGR2
  hgvsc: ENST00000450034.3:n.609-21C>A
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000254850
  ensembl transcript: ENST00000254850
  gene symbol: ASGR2
  hgvsc: ENST00000254850.7:c.185-21C>A
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000347140
  ensembl transcript: ENST00000355035
  gene symbol: ASGR2
  hgvsc: ENST00000355035.5:c.257-21C>A
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000458835
  ensembl transcript: ENST00000574868
  gene symbol: ASGR2
  hgvsc: ENST00000574868.1:c.242-21C>A
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000405844
  ensembl transcript: ENST00000446679
  gene symbol: ASGR2
  hgvsc: ENST00000446679.2:c.200-21C>A
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000370339
  ensembl transcript: ENST00000380952
  gene symbol: ASGR2
  hgvsc: ENST00000380952.2:c.257-21C>A
  variant of: http://identifiers.org/hgnc/743
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16775
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9717
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9474
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1204
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17783
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 880
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3231
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21483
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1600
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1463
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4185
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 368
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1212
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 237
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1813
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7895
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 813
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: East Asian
population: European (Finnish)
population: Other
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum

17-7011904-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7011904
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7011904
    reference: chr 17
allele count: 1
allele frequency: 1.206098031648012e-5
allele num: 82912
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000458835
  ensembl transcript: ENST00000574868
  gene symbol: ASGR2
  hgvsc: ENST00000574868.1:c.242-28C>T
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl transcript: ENST00000576487
  gene symbol: ASGR2
  hgvsc: ENST00000576487.1:n.554-28C>T
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl transcript: ENST00000450034
  gene symbol: ASGR2
  hgvsc: ENST00000450034.3:n.609-28C>T
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000254850
  ensembl transcript: ENST00000254850
  gene symbol: ASGR2
  hgvsc: ENST00000254850.7:c.185-28C>T
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000370339
  ensembl transcript: ENST00000380952
  gene symbol: ASGR2
  hgvsc: ENST00000380952.2:c.257-28C>T
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000405844
  ensembl transcript: ENST00000446679
  gene symbol: ASGR2
  hgvsc: ENST00000446679.2:c.200-28C>T
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000347140
  ensembl transcript: ENST00000355035
  gene symbol: ASGR2
  hgvsc: ENST00000355035.5:c.257-28C>T
  variant of: http://identifiers.org/hgnc/743
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1094
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9574
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10169
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16803
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17347
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 872
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3205
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 874
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1480
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 373
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6653
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1483
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 556
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 390
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9663
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1478
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5513
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Other
reference allele: G
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum

17-7011908-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7011908
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7011908
    reference: chr 17
allele count: 1
allele frequency: 1.200768491834774e-5
allele num: 83280
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000405844
  ensembl transcript: ENST00000446679
  gene symbol: ASGR2
  hgvsc: ENST00000446679.2:c.200-32G>A
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000370339
  ensembl transcript: ENST00000380952
  gene symbol: ASGR2
  hgvsc: ENST00000380952.2:c.257-32G>A
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl transcript: ENST00000576487
  gene symbol: ASGR2
  hgvsc: ENST00000576487.1:n.554-32G>A
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000254850
  ensembl transcript: ENST00000254850
  gene symbol: ASGR2
  hgvsc: ENST00000254850.7:c.185-32G>A
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000347140
  ensembl transcript: ENST00000355035
  gene symbol: ASGR2
  hgvsc: ENST00000355035.5:c.257-32G>A
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl transcript: ENST00000450034
  gene symbol: ASGR2
  hgvsc: ENST00000450034.3:n.609-32G>A
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000458835
  ensembl transcript: ENST00000574868
  gene symbol: ASGR2
  hgvsc: ENST00000574868.1:c.242-32G>A
  variant of: http://identifiers.org/hgnc/743
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10276
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 895
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17076
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1029
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16770
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9870
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3143
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 441
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1559
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1419
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21563
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1758
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1704
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4319
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 392
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6721
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 962
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Latino
population: East Asian
population: Other
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP

17-7011912-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7011912
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7011912
    reference: chr 17
allele count: 2
allele frequency: 2.371691490370933e-5
allele num: 84328
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl transcript: ENST00000450034
  gene symbol: ASGR2
  hgvsc: ENST00000450034.3:n.609-36C>T
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000254850
  ensembl transcript: ENST00000254850
  gene symbol: ASGR2
  hgvsc: ENST00000254850.7:c.185-36C>T
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000370339
  ensembl transcript: ENST00000380952
  gene symbol: ASGR2
  hgvsc: ENST00000380952.2:c.257-36C>T
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000347140
  ensembl transcript: ENST00000355035
  gene symbol: ASGR2
  hgvsc: ENST00000355035.5:c.257-36C>T
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl transcript: ENST00000576487
  gene symbol: ASGR2
  hgvsc: ENST00000576487.1:n.554-36C>T
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000405844
  ensembl transcript: ENST00000446679
  gene symbol: ASGR2
  hgvsc: ENST00000446679.2:c.200-36C>T
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000458835
  ensembl transcript: ENST00000574868
  gene symbol: ASGR2
  hgvsc: ENST00000574868.1:c.242-36C>T
  variant of: http://identifiers.org/hgnc/743
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16543
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3206
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 900
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9770
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 927
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16702
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11013
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 428
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4331
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1350
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5460
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 139
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6683
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1317
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 410
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 264
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: South Asian
population: European (Finnish)
population: Other
population: African
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD

17-7011915-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7011915
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7011915
    reference: chr 17
allele count: 1
allele frequency: 1.178078318646624e-5
allele num: 84884
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000370339
  ensembl transcript: ENST00000380952
  gene symbol: ASGR2
  hgvsc: ENST00000380952.2:c.257-39C>A
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000458835
  ensembl transcript: ENST00000574868
  gene symbol: ASGR2
  hgvsc: ENST00000574868.1:c.242-39C>A
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000254850
  ensembl transcript: ENST00000254850
  gene symbol: ASGR2
  hgvsc: ENST00000254850.7:c.185-39C>A
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl transcript: ENST00000450034
  gene symbol: ASGR2
  hgvsc: ENST00000450034.3:n.609-39C>A
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000405844
  ensembl transcript: ENST00000446679
  gene symbol: ASGR2
  hgvsc: ENST00000446679.2:c.200-39C>A
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl transcript: ENST00000576487
  gene symbol: ASGR2
  hgvsc: ENST00000576487.1:n.554-39C>A
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000347140
  ensembl transcript: ENST00000355035
  gene symbol: ASGR2
  hgvsc: ENST00000355035.5:c.257-39C>A
  variant of: http://identifiers.org/hgnc/743
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 864
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9612
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16373
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3268
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 917
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11638
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16391
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21176
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 141
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 455
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1276
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 443
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1021
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4295
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 447
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1589
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: Other
population: European (Finnish)
population: South Asian
population: African
population: European (Non-Finnish)
reference allele: G
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: DP

17-7011917-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7011917
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7011917
    reference: chr 17
allele count: 17
allele frequency: 1.989374400262129e-4
allele num: 85454
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000254850
  ensembl transcript: ENST00000254850
  gene symbol: ASGR2
  hgvsc: ENST00000254850.7:c.185-41G>A
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl transcript: ENST00000450034
  gene symbol: ASGR2
  hgvsc: ENST00000450034.3:n.609-41G>A
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl transcript: ENST00000576487
  gene symbol: ASGR2
  hgvsc: ENST00000576487.1:n.554-41G>A
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000347140
  ensembl transcript: ENST00000355035
  gene symbol: ASGR2
  hgvsc: ENST00000355035.5:c.257-41G>A
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000370339
  ensembl transcript: ENST00000380952
  gene symbol: ASGR2
  hgvsc: ENST00000380952.2:c.257-41G>A
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000405844
  ensembl transcript: ENST00000446679
  gene symbol: ASGR2
  hgvsc: ENST00000446679.2:c.200-41G>A
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000458835
  ensembl transcript: ENST00000574868
  gene symbol: ASGR2
  hgvsc: ENST00000574868.1:c.242-41G>A
  variant of: http://identifiers.org/hgnc/743
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16141
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 808
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 968
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3380
  bin: 2.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 12130
  bin: 2.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16037
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9593
  bin: 1.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 463
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 457
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10970
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 518
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20773
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1203
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5319
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1069
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 140
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1113
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: South Asian
population: European (Finnish)
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: MQ

17-7011918-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7011918
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7011918
    reference: chr 17
allele count: 12
allele frequency: 1.399318998087597e-4
allele num: 85756
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000254850
  ensembl transcript: ENST00000254850
  gene symbol: ASGR2
  hgvsc: ENST00000254850.7:c.185-42C>T
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000370339
  ensembl transcript: ENST00000380952
  gene symbol: ASGR2
  hgvsc: ENST00000380952.2:c.257-42C>T
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000458835
  ensembl transcript: ENST00000574868
  gene symbol: ASGR2
  hgvsc: ENST00000574868.1:c.242-42C>T
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl transcript: ENST00000576487
  gene symbol: ASGR2
  hgvsc: ENST00000576487.1:n.554-42C>T
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000405844
  ensembl transcript: ENST00000446679
  gene symbol: ASGR2
  hgvsc: ENST00000446679.2:c.200-42C>T
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000347140
  ensembl transcript: ENST00000355035
  gene symbol: ASGR2
  hgvsc: ENST00000355035.5:c.257-42C>T
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl transcript: ENST00000450034
  gene symbol: ASGR2
  hgvsc: ENST00000450034.3:n.609-42C>T
  variant of: http://identifiers.org/hgnc/743
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15791
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15959
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 9478
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 779
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3433
  bin: 2.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 960
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12651
  bin: 2.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1014
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20521
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 441
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4245
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 747
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11412
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1083
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1249
  bin: 9.75e1
  variant carriers: 12
genotype quality: GenotypeQuality
  all individuals: 1241
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6460
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Other
population: African
reference allele: G
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: BaseQRankSum

17-7011918-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7011918
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7011918
    reference: chr 17
allele count: 1
allele frequency: 1.166099165072998e-5
allele num: 85756
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000347140
  ensembl transcript: ENST00000355035
  gene symbol: ASGR2
  hgvsc: ENST00000355035.5:c.257-42C>G
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl transcript: ENST00000450034
  gene symbol: ASGR2
  hgvsc: ENST00000450034.3:n.609-42C>G
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl transcript: ENST00000576487
  gene symbol: ASGR2
  hgvsc: ENST00000576487.1:n.554-42C>G
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000458835
  ensembl transcript: ENST00000574868
  gene symbol: ASGR2
  hgvsc: ENST00000574868.1:c.242-42C>G
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000254850
  ensembl transcript: ENST00000254850
  gene symbol: ASGR2
  hgvsc: ENST00000254850.7:c.185-42C>G
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000405844
  ensembl transcript: ENST00000446679
  gene symbol: ASGR2
  hgvsc: ENST00000446679.2:c.200-42C>G
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000370339
  ensembl transcript: ENST00000380952
  gene symbol: ASGR2
  hgvsc: ENST00000380952.2:c.257-42C>G
  variant of: http://identifiers.org/hgnc/743
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 779
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15959
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3433
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9478
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15791
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12651
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 960
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 747
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1241
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20521
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 474
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1807
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1607
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6460
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1083
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 293
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Other
population: European (Finnish)
population: East Asian
population: Latino
population: European (Non-Finnish)
population: African
reference allele: G
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: QD

17-7011926-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7011926
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7011926
    reference: chr 17
allele count: 14
allele frequency: 1.565015203004829e-4
allele num: 89456
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl transcript: ENST00000450034
  gene symbol: ASGR2
  hgvsc: ENST00000450034.3:n.609-50T>C
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000458835
  ensembl transcript: ENST00000574868
  gene symbol: ASGR2
  hgvsc: ENST00000574868.1:c.242-50T>C
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000254850
  ensembl transcript: ENST00000254850
  gene symbol: ASGR2
  hgvsc: ENST00000254850.7:c.185-50T>C
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000405844
  ensembl transcript: ENST00000446679
  gene symbol: ASGR2
  hgvsc: ENST00000446679.2:c.200-50T>C
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000347140
  ensembl transcript: ENST00000355035
  gene symbol: ASGR2
  hgvsc: ENST00000355035.5:c.257-50T>C
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl transcript: ENST00000576487
  gene symbol: ASGR2
  hgvsc: ENST00000576487.1:n.554-50T>C
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000370339
  ensembl transcript: ENST00000380952
  gene symbol: ASGR2
  hgvsc: ENST00000380952.2:c.257-50T>C
  variant of: http://identifiers.org/hgnc/743
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8404
  bin: 1.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1146
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15008
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 586
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15168
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 14395
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4326
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 358
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1053
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1642
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2054
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 397
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 575
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 152
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4207
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 910
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4792
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Latino
reference allele: A
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum

17-7012027-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7012027
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7012027
    reference: chr 17
allele count: 1
allele frequency: 8.268152729317216e-6
allele num: 120946
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000347140
  ensembl transcript: ENST00000355035
  gene symbol: ASGR2
  hgvsc: ENST00000355035.5:c.256+49G>A
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl transcript: ENST00000450034
  gene symbol: ASGR2
  hgvsc: ENST00000450034.3:n.608+64G>A
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl transcript: ENST00000576487
  gene symbol: ASGR2
  hgvsc: ENST00000576487.1:n.553+64G>A
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000405844
  ensembl transcript: ENST00000446679
  gene symbol: ASGR2
  hgvsc: ENST00000446679.2:c.199+49G>A
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000370339
  ensembl transcript: ENST00000380952
  gene symbol: ASGR2
  hgvsc: ENST00000380952.2:c.256+49G>A
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000254850
  ensembl transcript: ENST00000254850
  gene symbol: ASGR2
  hgvsc: ENST00000254850.7:c.184+64G>A
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000458835
  ensembl transcript: ENST00000574868
  gene symbol: ASGR2
  hgvsc: ENST00000574868.1:c.241+64G>A
  variant of: http://identifiers.org/hgnc/743
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2214
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2047
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9475
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1479
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15599
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 891
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5010
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 675
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2550
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2392
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1431
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1752
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2161
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2617
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2441
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3487
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3175
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1122
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 782
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1266
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 501
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 282
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 301
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20339
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: African
population: Latino
population: South Asian
population: European (Finnish)
population: Other
reference allele: C
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum

17-7012038-CAT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7012038
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7012036
    reference: chr 17
allele count: 1
allele frequency: 8.261322141995606e-6
allele num: 121046
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000405844
  ensembl transcript: ENST00000446679
  gene symbol: ASGR2
  hgvsc: ENST00000446679.2:c.199+36_199+37delAT
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl transcript: ENST00000450034
  gene symbol: ASGR2
  hgvsc: ENST00000450034.3:n.608+51_608+52delAT
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000254850
  ensembl transcript: ENST00000254850
  gene symbol: ASGR2
  hgvsc: ENST00000254850.7:c.184+51_184+52delAT
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl transcript: ENST00000576487
  gene symbol: ASGR2
  hgvsc: ENST00000576487.1:n.553+51_553+52delAT
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000458835
  ensembl transcript: ENST00000574868
  gene symbol: ASGR2
  hgvsc: ENST00000574868.1:c.241+51_241+52delAT
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000347140
  ensembl transcript: ENST00000355035
  gene symbol: ASGR2
  hgvsc: ENST00000355035.5:c.256+36_256+37delAT
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000370339
  ensembl transcript: ENST00000380952
  gene symbol: ASGR2
  hgvsc: ENST00000380952.2:c.256+36_256+37delAT
  variant of: http://identifiers.org/hgnc/743
canonical: true
consequence: intron
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 518
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2550
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2057
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1122
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 464
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15890
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1479
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 891
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9644
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3184
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2438
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2620
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5662
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3487
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2223
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2393
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1752
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2162
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 307
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 129
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6176
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1861
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24807
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 179
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Latino
population: Other
population: South Asian
population: African
reference allele: CAT
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: VQSLOD

17-7012040-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7012040
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7012040
    reference: chr 17
allele count: 2
allele frequency: 1.652209830648492e-5
allele num: 121050
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000347140
  ensembl transcript: ENST00000355035
  gene symbol: ASGR2
  hgvsc: ENST00000355035.5:c.256+36A>G
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000254850
  ensembl transcript: ENST00000254850
  gene symbol: ASGR2
  hgvsc: ENST00000254850.7:c.184+51A>G
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000458835
  ensembl transcript: ENST00000574868
  gene symbol: ASGR2
  hgvsc: ENST00000574868.1:c.241+51A>G
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl transcript: ENST00000576487
  gene symbol: ASGR2
  hgvsc: ENST00000576487.1:n.553+51A>G
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000405844
  ensembl transcript: ENST00000446679
  gene symbol: ASGR2
  hgvsc: ENST00000446679.2:c.199+36A>G
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl transcript: ENST00000450034
  gene symbol: ASGR2
  hgvsc: ENST00000450034.3:n.608+51A>G
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000370339
  ensembl transcript: ENST00000380952
  gene symbol: ASGR2
  hgvsc: ENST00000380952.2:c.256+36A>G
  variant of: http://identifiers.org/hgnc/743
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2619
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2437
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15912
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3487
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5718
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9653
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2056
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1752
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2549
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3185
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1479
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2225
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1122
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 891
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2162
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2393
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24809
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 803
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21636
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 176
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 295
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Other
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
reference allele: T
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum

17-7012042-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7012042
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7012042
    reference: chr 17
allele count: 1
allele frequency: 8.260503229856763e-6
allele num: 121058
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000458835
  ensembl transcript: ENST00000574868
  gene symbol: ASGR2
  hgvsc: ENST00000574868.1:c.241+49A>T
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl transcript: ENST00000576487
  gene symbol: ASGR2
  hgvsc: ENST00000576487.1:n.553+49A>T
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000370339
  ensembl transcript: ENST00000380952
  gene symbol: ASGR2
  hgvsc: ENST00000380952.2:c.256+34A>T
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000254850
  ensembl transcript: ENST00000254850
  gene symbol: ASGR2
  hgvsc: ENST00000254850.7:c.184+49A>T
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000405844
  ensembl transcript: ENST00000446679
  gene symbol: ASGR2
  hgvsc: ENST00000446679.2:c.199+34A>T
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl transcript: ENST00000450034
  gene symbol: ASGR2
  hgvsc: ENST00000450034.3:n.608+49A>T
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000347140
  ensembl transcript: ENST00000355035
  gene symbol: ASGR2
  hgvsc: ENST00000355035.5:c.256+34A>T
  variant of: http://identifiers.org/hgnc/743
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 2161
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 891
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15933
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1122
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3488
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2226
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2057
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2437
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9665
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2549
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5760
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1479
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2393
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1752
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3184
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2619
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2156
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21676
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 204
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6207
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 211
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1315
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 162
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: European (Finnish)
population: East Asian
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: T
site quality: MQ
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum

17-7012045-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7012045
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7012045
    reference: chr 17
allele count: 729
allele frequency: 6.021508929013927e-3
allele num: 121066
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000370339
  ensembl transcript: ENST00000380952
  gene symbol: ASGR2
  hgvsc: ENST00000380952.2:c.256+31G>A
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl transcript: ENST00000576487
  gene symbol: ASGR2
  hgvsc: ENST00000576487.1:n.553+46G>A
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000347140
  ensembl transcript: ENST00000355035
  gene symbol: ASGR2
  hgvsc: ENST00000355035.5:c.256+31G>A
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000458835
  ensembl transcript: ENST00000574868
  gene symbol: ASGR2
  hgvsc: ENST00000574868.1:c.241+46G>A
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl transcript: ENST00000450034
  gene symbol: ASGR2
  hgvsc: ENST00000450034.3:n.608+46G>A
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000405844
  ensembl transcript: ENST00000446679
  gene symbol: ASGR2
  hgvsc: ENST00000446679.2:c.199+31G>A
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000254850
  ensembl transcript: ENST00000254850
  gene symbol: ASGR2
  hgvsc: ENST00000254850.7:c.184+46G>A
  variant of: http://identifiers.org/hgnc/743
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 902
  bin: 9.25e1
  variant carriers: 32
genotype depth: GenotypeDepth
  all individuals: 3200
  bin: 3.75e1
  variant carriers: 42
genotype depth: GenotypeDepth
  all individuals: 5703
  bin: 2.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 1.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 1.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 2152
  bin: 7.25e1
  variant carriers: 41
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2390
  bin: 6.75e1
  variant carriers: 35
genotype depth: GenotypeDepth
  all individuals: 1760
  bin: 7.75e1
  variant carriers: 45
genotype depth: GenotypeDepth
  all individuals: 15974
  bin: 2.75e1
  variant carriers: 40
genotype depth: GenotypeDepth
  all individuals: 2598
  bin: 5.75e1
  variant carriers: 28
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2071
  bin: 4.25e1
  variant carriers: 50
genotype depth: GenotypeDepth
  all individuals: 3603
  bin: 9.75e1
  variant carriers: 163
genotype depth: GenotypeDepth
  all individuals: 2214
  bin: 4.75e1
  variant carriers: 29
genotype depth: GenotypeDepth
  all individuals: 2531
  bin: 6.25e1
  variant carriers: 36
genotype depth: GenotypeDepth
  all individuals: 9688
  bin: 3.25e1
  variant carriers: 49
genotype depth: GenotypeDepth
  all individuals: 1486
  bin: 8.25e1
  variant carriers: 40
genotype depth: GenotypeDepth
  all individuals: 2419
  bin: 5.25e1
  variant carriers: 30
genotype depth: GenotypeDepth
  all individuals: 1130
  bin: 8.75e1
  variant carriers: 34
genotype quality: GenotypeQuality
  all individuals: 2133
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 787
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 174
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1867
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 179
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 272
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 144
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 7
population: Latino
population: European (Finnish)
population: African
population: South Asian
population: Other
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: DP

17-7012049-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7012049
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7012049
    reference: chr 17
allele count: 2
allele frequency: 1.65188231990353e-5
allele num: 121074
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000347140
  ensembl transcript: ENST00000355035
  gene symbol: ASGR2
  hgvsc: ENST00000355035.5:c.256+27G>A
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000254850
  ensembl transcript: ENST00000254850
  gene symbol: ASGR2
  hgvsc: ENST00000254850.7:c.184+42G>A
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000458835
  ensembl transcript: ENST00000574868
  gene symbol: ASGR2
  hgvsc: ENST00000574868.1:c.241+42G>A
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000370339
  ensembl transcript: ENST00000380952
  gene symbol: ASGR2
  hgvsc: ENST00000380952.2:c.256+27G>A
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl transcript: ENST00000576487
  gene symbol: ASGR2
  hgvsc: ENST00000576487.1:n.553+42G>A
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000405844
  ensembl transcript: ENST00000446679
  gene symbol: ASGR2
  hgvsc: ENST00000446679.2:c.199+27G>A
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl transcript: ENST00000450034
  gene symbol: ASGR2
  hgvsc: ENST00000450034.3:n.608+42G>A
  variant of: http://identifiers.org/hgnc/743
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2124
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 877
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16227
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2580
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2206
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2057
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1463
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2517
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3471
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3211
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9816
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5768
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2407
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1101
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2366
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1728
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6293
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24517
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 131
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 162
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 262
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: African
population: East Asian
reference allele: C
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD

http://identifiers.org/exac.variant/17-7012054-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7012054
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7012054
    reference: chr 17
allele count: 4
allele frequency: 3.303600925008259e-5
allele num: 121080
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000458835
  ensembl transcript: ENST00000574868
  gene symbol: ASGR2
  hgvsc: ENST00000574868.1:c.241+37G>T
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000405844
  ensembl transcript: ENST00000446679
  gene symbol: ASGR2
  hgvsc: ENST00000446679.2:c.199+22G>T
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000347140
  ensembl transcript: ENST00000355035
  gene symbol: ASGR2
  hgvsc: ENST00000355035.5:c.256+22G>T
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000370339
  ensembl transcript: ENST00000380952
  gene symbol: ASGR2
  hgvsc: ENST00000380952.2:c.256+22G>T
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl transcript: ENST00000576487
  gene symbol: ASGR2
  hgvsc: ENST00000576487.1:n.553+37G>T
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000254850
  ensembl transcript: ENST00000254850
  gene symbol: ASGR2
  hgvsc: ENST00000254850.7:c.184+37G>T
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl transcript: ENST00000450034
  gene symbol: ASGR2
  hgvsc: ENST00000450034.3:n.608+37G>T
  variant of: http://identifiers.org/hgnc/743
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3222
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2581
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3469
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9871
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 877
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1730
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2064
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1463
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5701
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2365
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1101
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2125
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16311
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2517
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2205
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2407
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 249
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 138
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22051
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6317
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1342
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: South Asian
population: Other
reference allele: C
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD

17-7012062-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7012062
    reference: chr 17
  end: Position
    type: ExactPosition
    position: 7012062
    reference: chr 17
allele count: 1
allele frequency: 8.25695648583932e-6
allele num: 121110
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl transcript: ENST00000576487
  gene symbol: ASGR2
  hgvsc: ENST00000576487.1:n.553+29G>C
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000254850
  ensembl transcript: ENST00000254850
  gene symbol: ASGR2
  hgvsc: ENST00000254850.7:c.184+29G>C
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000370339
  ensembl transcript: ENST00000380952
  gene symbol: ASGR2
  hgvsc: ENST00000380952.2:c.256+14G>C
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000347140
  ensembl transcript: ENST00000355035
  gene symbol: ASGR2
  hgvsc: ENST00000355035.5:c.256+14G>C
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000405844
  ensembl transcript: ENST00000446679
  gene symbol: ASGR2
  hgvsc: ENST00000446679.2:c.199+14G>C
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl protein: ENSP00000458835
  ensembl transcript: ENST00000574868
  gene symbol: ASGR2
  hgvsc: ENST00000574868.1:c.241+29G>C
  variant of: http://identifiers.org/hgnc/743
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000161944
  ensembl transcript: ENST00000450034
  gene symbol: ASGR2
  hgvsc: ENST00000450034.3:n.608+29G>C
  variant of: http://identifiers.org/hgnc/743
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 3235
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2124
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1463
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2367
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9956
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16397
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2406
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 877
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1728
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3469
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1101
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2518
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2581
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
reference allele: C

GenotypeQuality
all individuals: 25
bin: 1.25e1
variant carriers: 5

GenotypeQuality
all individuals: 32
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 129
bin: 4.75e1
variant carriers: 8

GenotypeQuality
all individuals: 432
bin: 3.25e1
variant carriers: 8

GenotypeQuality
all individuals: 245
bin: 5.25e1
variant carriers: 16

GenotypeQuality
all individuals: 7336
bin: 6.75e1
variant carriers: 13

GenotypeQuality
all individuals: 205
bin: 5.75e1
variant carriers: 11

GenotypeQuality
all individuals: 327
bin: 2.75e1
variant carriers: 2

GenotypeQuality
all individuals: 478
bin: 8.75e1
variant carriers: 22

GenotypeQuality
all individuals: 30
bin: 1.75e1
variant carriers: 4

GenotypeQuality
all individuals: 600
bin: 9.25e1
variant carriers: 27

GenotypeQuality
all individuals: 2188
bin: 7.75e1
variant carriers: 18

GenotypeQuality
all individuals: 224
bin: 3.75e1
variant carriers: 7

African
type: Population
allele count: 2553
allele frequency: 2.492677211482132e-1
allele num: 10242
num of homozygotes: 337

Latino
type: Population
allele count: 336
allele frequency: 2.944269190325973e-2
allele num: 11412
num of homozygotes: 5

European (Finnish)
type: Population
allele count: 156
allele frequency: 2.394841879029782e-2
allele num: 6514
num of homozygotes: 1

East Asian
type: Population
allele count: 889
allele frequency: 1.032760223048327e-1
allele num: 8608
num of homozygotes: 38

Other
type: Population
allele count: 45
allele frequency: 5.079006772009029e-2
allele num: 886
num of homozygotes: 0

South Asian
type: Population
allele count: 667
allele frequency: 4.083506795640994e-2
allele num: 16334
num of homozygotes: 22

European (Non-Finnish)
type: Population
allele count: 3004
allele frequency: 4.552756812464005e-2
allele num: 65982
num of homozygotes: 79

DP
type: SiteQuality
SIO_000300: 1.91758e6

MQ
type: SiteQuality
SIO_000300: 5.756e1

VQSLOD
type: SiteQuality
SIO_000300: 1.32e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.72e-2

QD
type: SiteQuality
SIO_000300: 1.412e1

MQRankSum
type: SiteQuality
SIO_000300: 1.93e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.39e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.33e0

FS
type: SiteQuality
SIO_000300: 6.25e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.49e-1

GenotypeQuality
all individuals: 303
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2291
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 91
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 652
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 434
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1265
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 514
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38283
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 132
bin: 4.75e1
variant carriers: 0

South Asian
type: Population
allele count: 38
allele frequency: 2.330430516374341e-3
allele num: 16306
num of homozygotes: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10134
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11396
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6516
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8590
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65922
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -6.182e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 3.19e-1

QD
type: SiteQuality
SIO_000300: 1.405e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.722e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.09e-2

MQ
type: SiteQuality
SIO_000300: 5.583e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.05e-1

DP
type: SiteQuality
SIO_000300: 1.735554e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.0e-3

GenotypeQuality
all individuals: 309
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 253
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 392
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3478
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 32
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 600
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1252
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2257
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2377
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 139
bin: 4.75e1
variant carriers: 0

East Asian
type: Population
allele count: 3
allele frequency: 3.497318722312894e-4
allele num: 8578
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16284
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6502
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10118
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11372
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65794
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.41e0

MQRankSum
type: SiteQuality
SIO_000300: 9.02e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.51e-1

QD
type: SiteQuality
SIO_000300: 2.02e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

MQ
type: SiteQuality
SIO_000300: 5.604e1

VQSLOD
type: SiteQuality
SIO_000300: -1.43e0

FS
type: SiteQuality
SIO_000300: 1.1141e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.6e-2

DP
type: SiteQuality
SIO_000300: 1.721407e6

GenotypeQuality
all individuals: 1927
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 259
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 733
bin: 3.25e1
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GenotypeQuality
all individuals: 1248
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8062
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 7.5e0
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GenotypeQuality
all individuals: 15
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 602
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 127
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 139
bin: 4.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10114
num of homozygotes: 0

South Asian
type: Population
allele count: 10
allele frequency: 6.142506142506142e-4
allele num: 16280
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8580
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6502
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.599246154781445e-5
allele num: 65796
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11372
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.47e-1

FS
type: SiteQuality
SIO_000300: 1.676e0

DP
type: SiteQuality
SIO_000300: 1.721191e6

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -1.068e0

QD
type: SiteQuality
SIO_000300: 1.185e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.64e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 5.679999999999999e-1

MQ
type: SiteQuality
SIO_000300: 5.787e1

GenotypeQuality
all individuals: 495
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36797
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 757
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variant carriers: 0

GenotypeQuality
all individuals: 3476
bin: 9.75e1
variant carriers: 18

GenotypeQuality
all individuals: 2255
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variant carriers: 0

GenotypeQuality
all individuals: 7882
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variant carriers: 0

GenotypeQuality
all individuals: 2278
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 339
bin: 5.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11350
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.152331733727083e-5
allele num: 16254
num of homozygotes: 0

East Asian
type: Population
allele count: 18
allele frequency: 2.102803738317757e-3
allele num: 8560
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10068
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6480
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65656
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.708702e6

BaseQRankSum
type: SiteQuality
SIO_000300: 5.7e-1

VQSLOD
type: SiteQuality
SIO_000300: -3.097e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.27e-1

MQ
type: SiteQuality
SIO_000300: 5.802e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.4e-2

FS
type: SiteQuality
SIO_000300: 6.55e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.81e-1

QD
type: SiteQuality
SIO_000300: 1.16e1

GenotypeQuality
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 629
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7851
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variant carriers: 0

GenotypeQuality
all individuals: 493
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 571
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1030
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36743
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1204
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variant carriers: 0

GenotypeQuality
all individuals: 2259
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 191
bin: 4.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.168770453482936e-4
allele num: 8556
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11344
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10072
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6482
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16248
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65638
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.663e0

MQRankSum
type: SiteQuality
SIO_000300: 2.19e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.549e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.35e0

DP
type: SiteQuality
SIO_000300: 1.702969e6

BaseQRankSum
type: SiteQuality
SIO_000300: 4.25e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

QD
type: SiteQuality
SIO_000300: 8.57e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.03e0

MQ
type: SiteQuality
SIO_000300: 5.863e1

GenotypeQuality
all individuals: 3545
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3447
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2151
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 392
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 326
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variant carriers: 0

GenotypeQuality
all individuals: 2047
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variant carriers: 0

GenotypeQuality
all individuals: 328
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variant carriers: 0

GenotypeQuality
all individuals: 1198
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1165
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 411
bin: 4.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11310
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8494
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65346
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9994
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6448
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.192717364379489e-5
allele num: 16148
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

QD
type: SiteQuality
SIO_000300: 1.209e1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -5.74e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.1e-1

DP
type: SiteQuality
SIO_000300: 1.655474e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.15e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.3e-2

MQ
type: SiteQuality
SIO_000300: 5.933e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.53e-1

GenotypeQuality
all individuals: 495
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 88
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variant carriers: 0

GenotypeQuality
all individuals: 1702
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variant carriers: 0

GenotypeQuality
all individuals: 7006
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variant carriers: 0

GenotypeQuality
all individuals: 31569
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variant carriers: 0

GenotypeQuality
all individuals: 2091
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variant carriers: 0

GenotypeQuality
all individuals: 455
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variant carriers: 0

GenotypeQuality
all individuals: 3444
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variant carriers: 1

GenotypeQuality
all individuals: 4192
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1135
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.533366045142296e-5
allele num: 65216
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9970
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6438
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11302
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8480
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16120
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.37e0

MQ
type: SiteQuality
SIO_000300: 5.827e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

DP
type: SiteQuality
SIO_000300: 1.624581e6

ClippingRankSum
type: SiteQuality
SIO_000300: -2.22e0

MQRankSum
type: SiteQuality
SIO_000300: -1.098e0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 9.050000000000001e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.68e-1

VQSLOD
type: SiteQuality
SIO_000300: -3.789e0

GenotypeQuality
all individuals: 2566
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 157
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variant carriers: 0

GenotypeQuality
all individuals: 928
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variant carriers: 0

GenotypeQuality
all individuals: 1823
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variant carriers: 0

GenotypeQuality
all individuals: 456
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variant carriers: 1

GenotypeQuality
all individuals: 26162
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variant carriers: 0

GenotypeQuality
all individuals: 6176
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variant carriers: 0

GenotypeQuality
all individuals: 1944
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variant carriers: 0

GenotypeQuality
all individuals: 3442
bin: 9.75e1
variant carriers: 10

GenotypeQuality
all individuals: 661
bin: 5.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 7
allele frequency: 1.079846970257929e-4
allele num: 64824
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8392
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9898
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 870
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6386
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.870091011095873e-4
allele num: 16042
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11244
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.0705e1

MQ
type: SiteQuality
SIO_000300: 5.779e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.08e-1

QD
type: SiteQuality
SIO_000300: 1.571e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.18e0

MQRankSum
type: SiteQuality
SIO_000300: 4.86e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.333e0

DP
type: SiteQuality
SIO_000300: 1.548053e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.03e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.2e-3

GenotypeQuality
all individuals: 936
bin: 4.75e1
variant carriers: 1

GenotypeQuality
all individuals: 160
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3425
bin: 9.75e1
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GenotypeQuality
all individuals: 450
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GenotypeQuality
all individuals: 2585
bin: 2.75e1
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GenotypeQuality
all individuals: 403
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variant carriers: 0

GenotypeQuality
all individuals: 1764
bin: 7.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 118
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variant carriers: 0

GenotypeQuality
all individuals: 4146
bin: 3.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9892
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.08413520848754e-5
allele num: 64848
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6380
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16002
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8416
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.911067545891998e-5
allele num: 11222
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.457e0

VQSLOD
type: SiteQuality
SIO_000300: -9.346e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.1e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -5.94e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 6.23e-1

MQ
type: SiteQuality
SIO_000300: 5.766e1

QD
type: SiteQuality
SIO_000300: 7.32e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.23e-1

DP
type: SiteQuality
SIO_000300: 1.543473e6

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5836
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 3419
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1287
bin: 4.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6376
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.901548869503294e-5
allele num: 11234
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64792
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9880
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16018
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8414
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.906e0

MQ
type: SiteQuality
SIO_000300: 5.576e1

QD
type: SiteQuality
SIO_000300: 1.143e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.1e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -9.46e-1

FS
type: SiteQuality
SIO_000300: 2.251e0

DP
type: SiteQuality
SIO_000300: 1.512743e6

MQRankSum
type: SiteQuality
SIO_000300: 3.15e-1

VQSLOD
type: SiteQuality
SIO_000300: -9.616e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.1e-1

GenotypeQuality
all individuals: 1356
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 966
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 8
allele frequency: 8.261049153242462e-4
allele num: 9684
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.564602434521388e-5
allele num: 63914
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11072
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15794
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6272
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8298
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 848
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.391973e6

MQRankSum
type: SiteQuality
SIO_000300: 5.21e-1

MQ
type: SiteQuality
SIO_000300: 5.863e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.7e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 8.41e-1

QD
type: SiteQuality
SIO_000300: 1.365e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.81e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.26e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.3e-3

GenotypeQuality
all individuals: 809
bin: 5.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 3298
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 13472
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3709
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variant carriers: 0

GenotypeQuality
all individuals: 582
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GenotypeQuality
all individuals: 4405
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15794
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.179245283018868e-3
allele num: 848
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11072
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.032631144155308e-4
allele num: 9684
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6272
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.564602434521388e-5
allele num: 63914
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8298
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.26e0

MQRankSum
type: SiteQuality
SIO_000300: 5.21e-1

QD
type: SiteQuality
SIO_000300: 1.365e1

DP
type: SiteQuality
SIO_000300: 1.391973e6

MQ
type: SiteQuality
SIO_000300: 5.863e1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.3e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 1.81e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.41e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.7e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 3411
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 846
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9662
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11020
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6256
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 63838
num of homozygotes: 0

East Asian
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allele count: 1
allele frequency: 1.20627261761158e-4
allele num: 8290
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15750
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.788e1

VQSLOD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 5.229e0

DP
type: SiteQuality
SIO_000300: 1.388503e6

BaseQRankSum
type: SiteQuality
SIO_000300: -3.505e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.1e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.113e0

MQRankSum
type: SiteQuality
SIO_000300: 4.54e-1

QD
type: SiteQuality
SIO_000300: 2.23e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.03e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 7

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 15806
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9694
num of homozygotes: 0

Latino
type: Population
allele count: 7
allele frequency: 6.319971108703503e-4
allele num: 11076
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 846
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8300
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6258
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63892
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.11e1

ReadPosRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -1.7e-3

MQRankSum
type: SiteQuality
SIO_000300: -2.827e0

VQSLOD
type: SiteQuality
SIO_000300: 1.96e0

FS
type: SiteQuality
SIO_000300: 1.324e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.64e0

DP
type: SiteQuality
SIO_000300: 1.381984e6

QD
type: SiteQuality
SIO_000300: 9.779999999999999e0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.36e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 5798
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 182
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 540
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3360
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 8.632596685082873e-5
allele num: 11584
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 1386
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 376
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.127e1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -9.81e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.42e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.341e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.301e0

DP
type: SiteQuality
SIO_000300: 5.02174e5

VQSLOD
type: SiteQuality
SIO_000300: -4.793e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.71e-2

MQ
type: SiteQuality
SIO_000300: 5.942e1

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 5

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 388
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11806
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1412
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3388
num of homozygotes: 0

South Asian
type: Population
allele count: 5
allele frequency: 8.411843876177658e-4
allele num: 5944
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 186
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 568
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -7.307e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.69e-2

MQRankSum
type: SiteQuality
SIO_000300: 5.5e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.12e-1

DP
type: SiteQuality
SIO_000300: 5.07608e5

QD
type: SiteQuality
SIO_000300: 2.924e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.75e0

FS
type: SiteQuality
SIO_000300: 1.443e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.96e-1

GenotypeQuality
all individuals: 20080
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
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bin: 3.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 412
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 190
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 600
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1494
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6060
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12118
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3434
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 5.5e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.46e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.06e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.06e-1

QD
type: SiteQuality
SIO_000300: 8.390000000000001e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.54e0

VQSLOD
type: SiteQuality
SIO_000300: 1.9e0

DP
type: SiteQuality
SIO_000300: 5.14833e5

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1232
bin: 9.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 8.082767539605561e-5
allele num: 12372
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 616
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 196
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6166
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1544
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3470
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 438
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 8.417999999999999e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.83e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.83e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -9.88e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.06e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.65e-2

VQSLOD
type: SiteQuality
SIO_000300: 2.28e-1

QD
type: SiteQuality
SIO_000300: 9.369999999999999e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 5.31165e5

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 206
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6494
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 732
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3644
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13556
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1708
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.62e-2

QD
type: SiteQuality
SIO_000300: 1.139e1

DP
type: SiteQuality
SIO_000300: 5.73986e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 1.23e0

BaseQRankSum
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SIO_000300: -6.34e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.4e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.5e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.5e-1

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 2
allele frequency: 2.917152858809801e-4
allele num: 6856
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 572
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1894
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African
type: Population
allele count: 0
allele frequency: 0.0e0
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 226
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.213592233009709e-3
allele num: 824
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 9
allele frequency: 6.225788599889319e-4
allele num: 14456
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
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QD
type: SiteQuality
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MQRankSum
type: SiteQuality
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MQ
type: SiteQuality
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FS
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 5.73e-1

InbreedingCoeff
type: SiteQuality
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DP
type: SiteQuality
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VQSLOD
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ClippingRankSum
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 236
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
allele num: 948
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European (Non-Finnish)
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allele count: 2
allele frequency: 1.277791975466394e-4
allele num: 15652
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 3968
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 678
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South Asian
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allele count: 2
allele frequency: 2.727768685215493e-4
allele num: 7332
num of homozygotes: 0

QD
type: SiteQuality
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MQRankSum
type: SiteQuality
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VQSLOD
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FS
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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BaseQRankSum
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DP
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.62e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 276
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 5.167424555601488e-5
allele num: 19352
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 928
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

ClippingRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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MQ
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ReadPosRankSum
type: SiteQuality
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MQRankSum
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QD
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VQSLOD
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FS
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 7.01865e5

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 4974
num of homozygotes: 0

South Asian
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allele frequency: 1.10692937790569e-4
allele num: 9034
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 4.336513443191674e-5
allele num: 23060
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 1180
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 1970
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Other
type: Population
allele count: 0
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num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
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QD
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MQRankSum
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BaseQRankSum
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DP
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InbreedingCoeff
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FS
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ReadPosRankSum
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SIO_000300: 5.679999999999999e-1

VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
type: Population
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allele frequency: 0.0e0
allele num: 312
num of homozygotes: 0

Latino
type: Population
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allele frequency: 0.0e0
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African
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allele frequency: 4.696673189823875e-3
allele num: 5110
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 3
allele frequency: 1.257967125125797e-4
allele num: 23848
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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InbreedingCoeff
type: SiteQuality
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MQRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 1.9e-1

BaseQRankSum
type: SiteQuality
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DP
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FS
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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VQSLOD
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MQ
type: SiteQuality
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele frequency: 0.0e0
allele num: 2352
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 3.920031360250882e-5
allele num: 25510
num of homozygotes: 0

African
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 340
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele num: 3660
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South Asian
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ReadPosRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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BaseQRankSum
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MQ
type: SiteQuality
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VQSLOD
type: SiteQuality
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InbreedingCoeff
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FS
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: 7.23e-1

QD
type: SiteQuality
SIO_000300: 5.02e0

DP
type: SiteQuality
SIO_000300: 7.97013e5

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 3760
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 1.857355126300148e-4
allele num: 5384
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
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allele frequency: 0.0e0
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 340
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.15e-1

BaseQRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.899e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.800000000000001e-3

VQSLOD
type: SiteQuality
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FS
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QD
type: SiteQuality
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MQRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 8.04921e5

ClippingRankSum
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 4324
num of homozygotes: 0

South Asian
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allele frequency: 9.964129135113592e-5
allele num: 10036
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 3036
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 29522
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African
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allele frequency: 0.0e0
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Other
type: Population
allele count: 0
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ClippingRankSum
type: SiteQuality
SIO_000300: 6.6e-1

DP
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ReadPosRankSum
type: SiteQuality
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MQ
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MQRankSum
type: SiteQuality
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FS
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QD
type: SiteQuality
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VQSLOD
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BaseQRankSum
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele frequency: 0.0e0
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Other
type: Population
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South Asian
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Latino
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
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European (Finnish)
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ReadPosRankSum
type: SiteQuality
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ClippingRankSum
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BaseQRankSum
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DP
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VQSLOD
type: SiteQuality
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InbreedingCoeff
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FS
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QD
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MQRankSum
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 31366
num of homozygotes: 0

South Asian
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African
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allele frequency: 1.672800267648043e-4
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Latino
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European (Finnish)
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Other
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East Asian
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InbreedingCoeff
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ClippingRankSum
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MQ
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MQRankSum
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VQSLOD
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FS
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ReadPosRankSum
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DP
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BaseQRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele num: 32848
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East Asian
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South Asian
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European (Finnish)
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Latino
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African
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Other
type: Population
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QD
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VQSLOD
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FS
type: SiteQuality
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BaseQRankSum
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DP
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InbreedingCoeff
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MQRankSum
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ClippingRankSum
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MQ
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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allele num: 440
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10928
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2158
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6498
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4292
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5210
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 5.557099194220617e-5
allele num: 35990
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.89e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.46e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.03e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.1e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 9.28153e5

BaseQRankSum
type: SiteQuality
SIO_000300: -1.82e-1

QD
type: SiteQuality
SIO_000300: 1.442e1

FS
type: SiteQuality
SIO_000300: 2.936e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.1e-3

GenotypeQuality
all individuals: 27055
bin: 2.25e1
variant carriers: 1

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 765
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 344
bin: 4.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 5.468365505550391e-5
allele num: 36574
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.817520901490367e-4
allele num: 11004
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5296
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2220
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4436
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 456
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 9.36828e5

VQSLOD
type: SiteQuality
SIO_000300: 7.56e-1

FS
type: SiteQuality
SIO_000300: 3.673e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-3

QD
type: SiteQuality
SIO_000300: 9.98e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.06e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.06e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 8.22e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.1e-1

GenotypeQuality
all individuals: 257
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 147
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1154
bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 346
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variant carriers: 0

GenotypeQuality
all individuals: 1720
bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6702
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2342
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 37676
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11162
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 2.158894645941278e-4
allele num: 4632
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5418
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 474
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.915e0

FS
type: SiteQuality
SIO_000300: 2.158e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.555e0

MQRankSum
type: SiteQuality
SIO_000300: 5.56e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.6e-3

MQ
type: SiteQuality
SIO_000300: 5.747e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.45e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.72e-1

QD
type: SiteQuality
SIO_000300: 1.144e1

DP
type: SiteQuality
SIO_000300: 9.48322e5

GenotypeQuality
all individuals: 477
bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1004
bin: 7.5e0
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25540
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 548
bin: 4.75e1
variant carriers: 1

Latino
type: Population
allele count: 1
allele frequency: 2.021018593371059e-4
allele num: 4948
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6870
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 488
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2454
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 39306
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11364
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5626
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 2.25e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.479e0

MQRankSum
type: SiteQuality
SIO_000300: 5.55e-1

MQ
type: SiteQuality
SIO_000300: 5.966e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.85e-1

DP
type: SiteQuality
SIO_000300: 9.67262e5

QD
type: SiteQuality
SIO_000300: 9.869999999999999e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.02e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.2e-3

GenotypeQuality
all individuals: 24904
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1781
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 867
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 321
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1797
bin: 6.75e1
variant carriers: 2

GenotypeQuality
all individuals: 145
bin: 9.25e1
variant carriers: 3

GenotypeQuality
all individuals: 252
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 271
bin: 8.25e1
variant carriers: 2

GenotypeQuality
all individuals: 1272
bin: 9.75e1
variant carriers: 39

GenotypeQuality
all individuals: 109
bin: 8.75e1
variant carriers: 1

GenotypeQuality
all individuals: 461
bin: 1.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5716
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2524
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 40176
num of homozygotes: 0

South Asian
type: Population
allele count: 40
allele frequency: 3.480682213713888e-3
allele num: 11492
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6962
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.955416503715291e-4
allele num: 5114
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 496
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.956e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.51e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.34e-1

QD
type: SiteQuality
SIO_000300: 1.017e1

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 9.7945e5

VQSLOD
type: SiteQuality
SIO_000300: 1.31e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.6e-3

FS
type: SiteQuality
SIO_000300: 5.41e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.09e-1

GenotypeQuality
all individuals: 147
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 297
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1798
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variant carriers: 0

GenotypeQuality
all individuals: 232
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variant carriers: 0

GenotypeQuality
all individuals: 512
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variant carriers: 0

GenotypeQuality
all individuals: 140
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GenotypeQuality
all individuals: 23086
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variant carriers: 0

GenotypeQuality
all individuals: 447
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1940
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variant carriers: 0

GenotypeQuality
all individuals: 483
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 107
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 40676
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.731301939058172e-4
allele num: 5776
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.427347987439338e-4
allele num: 7006
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2540
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 500
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5198
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.58e-1

MQRankSum
type: SiteQuality
SIO_000300: -5.03e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.2e-3

FS
type: SiteQuality
SIO_000300: 3.565e0

MQ
type: SiteQuality
SIO_000300: 5.866e1

VQSLOD
type: SiteQuality
SIO_000300: -1.134e0

DP
type: SiteQuality
SIO_000300: 9.84725e5

QD
type: SiteQuality
SIO_000300: 1.223e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.8e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.06e-1

GenotypeQuality
all individuals: 858
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 474
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 142
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 108
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GenotypeQuality
all individuals: 267
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GenotypeQuality
all individuals: 23875
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variant carriers: 0

GenotypeQuality
all individuals: 287
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GenotypeQuality
all individuals: 83
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GenotypeQuality
all individuals: 453
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variant carriers: 0

GenotypeQuality
all individuals: 446
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variant carriers: 0

GenotypeQuality
all individuals: 1236
bin: 9.75e1
variant carriers: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 516
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2650
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7122
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5472
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5910
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11670
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.394636015325671e-5
allele num: 41760
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 9.95117e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.17e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.3e-3

MQ
type: SiteQuality
SIO_000300: 5.95e1

FS
type: SiteQuality
SIO_000300: 5.775e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.41e-1

QD
type: SiteQuality
SIO_000300: 1.51e1

MQRankSum
type: SiteQuality
SIO_000300: -5.21e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.93e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.85e0

GenotypeQuality
all individuals: 1236
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 267
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 885
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 705
bin: 5.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 142
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variant carriers: 0

GenotypeQuality
all individuals: 1833
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 399
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 108
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5472
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11670
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 4.789272030651341e-5
allele num: 41760
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7122
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5910
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2650
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 516
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 9.95117e5

QD
type: SiteQuality
SIO_000300: 1.51e1

MQRankSum
type: SiteQuality
SIO_000300: -5.21e-1

MQ
type: SiteQuality
SIO_000300: 5.95e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.93e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.3e-3

FS
type: SiteQuality
SIO_000300: 5.775e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.41e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.85e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.17e-1

GenotypeQuality
all individuals: 2077
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1035
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 540
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GenotypeQuality
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GenotypeQuality
all individuals: 53
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variant carriers: 0

GenotypeQuality
all individuals: 262
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1245
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variant carriers: 13

GenotypeQuality
all individuals: 341
bin: 4.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 524
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 16
allele frequency: 3.779825183085282e-4
allele num: 42330
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2704
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5534
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5946
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11732
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7180
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.7e-3

QD
type: SiteQuality
SIO_000300: 1.101e1

VQSLOD
type: SiteQuality
SIO_000300: 2.59e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.04e0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.8e-2

FS
type: SiteQuality
SIO_000300: 1.098e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.55e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.25e-1

DP
type: SiteQuality
SIO_000300: 9.94801e5

MQ
type: SiteQuality
SIO_000300: 5.953e1

GenotypeQuality
all individuals: 2158
bin: 2.75e1
variant carriers: 1

GenotypeQuality
all individuals: 22780
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1015
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variant carriers: 0

GenotypeQuality
all individuals: 470
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GenotypeQuality
all individuals: 439
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 486
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GenotypeQuality
all individuals: 1841
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 23885
bin: 2.25e1
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GenotypeQuality
all individuals: 1237
bin: 9.75e1
variant carriers: 4

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 526
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2718
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5980
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 1.413028119259573e-4
allele num: 42462
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5564
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7192
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11756
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.2e-3

VQSLOD
type: SiteQuality
SIO_000300: -3.078e0

MQRankSum
type: SiteQuality
SIO_000300: -7.099999999999999e-2

FS
type: SiteQuality
SIO_000300: 2.1268e1

QD
type: SiteQuality
SIO_000300: 9.25e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.77e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.53e-1

DP
type: SiteQuality
SIO_000300: 9.97078e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.95e-1

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2742
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11778
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.785714285714286e-4
allele num: 5600
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 42614
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 7218
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5996
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 526
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.41e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.6e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.45e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.772e0

FS
type: SiteQuality
SIO_000300: 1.9352e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.929999999999999e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.669999999999999e-1

QD
type: SiteQuality
SIO_000300: 7.15e0

DP
type: SiteQuality
SIO_000300: 9.9946e5

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 6062
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 2.306379445546381e-5
allele num: 43358
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 7292
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 2826
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 534
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 11892
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.003004e6

MQRankSum
type: SiteQuality
SIO_000300: 4.29e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.076e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.6e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 1.84e-1

QD
type: SiteQuality
SIO_000300: 4.9e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.96e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 11954
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 536
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5788
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7310
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6036
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 43556
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 2886
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.13e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.8e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.36e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.36e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.36e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.36e-1

QD
type: SiteQuality
SIO_000300: 1.292e1

DP
type: SiteQuality
SIO_000300: 9.91568e5

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6048
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 43674
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11980
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.720578114246387e-4
allele num: 5812
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7340
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2904
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 542
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.158e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.0e0

VQSLOD
type: SiteQuality
SIO_000300: 1.07e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.9e-3

MQRankSum
type: SiteQuality
SIO_000300: -2.95e-1

QD
type: SiteQuality
SIO_000300: 1.31e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.9e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.77e-1

DP
type: SiteQuality
SIO_000300: 9.93581e5

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5808
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7342
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11992
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 542
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.290216196408941e-5
allele num: 43664
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 6042
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2910
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.9e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 2.96e-1

QD
type: SiteQuality
SIO_000300: 9.25e0

DP
type: SiteQuality
SIO_000300: 9.82924e5

VQSLOD
type: SiteQuality
SIO_000300: 2.91e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.31e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.46e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.96e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 3

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2980
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5924
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12130
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.353546291283162e-4
allele num: 7388
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 4.517119884361731e-5
allele num: 44276
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 552
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6064
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.3e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -6.27e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
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VQSLOD
type: SiteQuality
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MQRankSum
type: SiteQuality
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QD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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MQ
type: SiteQuality
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GenotypeQuality
all individuals: 4055
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
type: Population
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allele frequency: 0.0e0
allele num: 12130
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6064
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 44276
num of homozygotes: 0

African
type: Population
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allele frequency: 0.0e0
allele num: 7388
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 552
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.688048615800135e-4
allele num: 5924
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 2980
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 9.6136e5

MQ
type: SiteQuality
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MQRankSum
type: SiteQuality
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FS
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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QD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 9.65e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.3e-2

InbreedingCoeff
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: -6.27e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 546
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 2.244165170556553e-5
allele num: 44560
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 12192
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 0
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num of homozygotes: 0

FS
type: SiteQuality
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VQSLOD
type: SiteQuality
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DP
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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MQRankSum
type: SiteQuality
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QD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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MQ
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 560
num of homozygotes: 0

Latino
type: Population
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East Asian
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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African
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South Asian
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allele num: 12288
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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QD
type: SiteQuality
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FS
type: SiteQuality
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VQSLOD
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MQ
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DP
type: SiteQuality
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MQRankSum
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BaseQRankSum
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ClippingRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 251
bin: 5.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12346
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 564
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6080
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6108
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.216803369541122e-5
allele num: 45110
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7448
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3068
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -5.71e-1

FS
type: SiteQuality
SIO_000300: 9.138999999999999e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.19e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.23e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 1.51e0

QD
type: SiteQuality
SIO_000300: 1.015e1

DP
type: SiteQuality
SIO_000300: 9.37083e5

BaseQRankSum
type: SiteQuality
SIO_000300: -2.906e0

MQ
type: SiteQuality
SIO_000300: 5.911e1

GenotypeQuality
all individuals: 370
bin: 7.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 570
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 45084
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3060
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.344809037116729e-4
allele num: 7436
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 6098
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 12338
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 6056
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.2e-3

FS
type: SiteQuality
SIO_000300: 4.5e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -1.098e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.91e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.633e0

MQRankSum
type: SiteQuality
SIO_000300: -1.33e0

DP
type: SiteQuality
SIO_000300: 9.31096e5

QD
type: SiteQuality
SIO_000300: 1.722e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.01e0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3168
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7542
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6224
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 576
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 45694
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6142
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 8.050233456770246e-5
allele num: 12422
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.52e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.495e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.32e-1

QD
type: SiteQuality
SIO_000300: 1.333e1

VQSLOD
type: SiteQuality
SIO_000300: -1.108e0

FS
type: SiteQuality
SIO_000300: 3.916e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.8e-1

MQ
type: SiteQuality
SIO_000300: 5.645e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.4e-3

DP
type: SiteQuality
SIO_000300: 9.16786e5

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 10588
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7552
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12428
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.754385964912281e-3
allele num: 570
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6196
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3178
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6120
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 45662
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 9.14234e5

MQRankSum
type: SiteQuality
SIO_000300: 1.06e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.7e-3

VQSLOD
type: SiteQuality
SIO_000300: -1.441e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.586e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.7e0

FS
type: SiteQuality
SIO_000300: 1.122e1

QD
type: SiteQuality
SIO_000300: 1.277e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.624e0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 237
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GenotypeQuality
all individuals: 1108
bin: 6.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 586
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7520
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3208
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12392
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6180
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.201091741503786e-5
allele num: 45432
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6012
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.242e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.669999999999999e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.28e0

DP
type: SiteQuality
SIO_000300: 9.07723e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.18e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.11e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.9e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -2.855e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 1231
bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1108
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 99
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 139
bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12392
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7520
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6012
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3208
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 586
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6180
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.201091741503786e-5
allele num: 45432
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.855e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.18e-1

QD
type: SiteQuality
SIO_000300: 1.242e1

VQSLOD
type: SiteQuality
SIO_000300: 1.28e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 9.07723e5

MQRankSum
type: SiteQuality
SIO_000300: 1.11e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.9e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -5.669999999999999e-1

GenotypeQuality
all individuals: 371
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

South Asian
type: Population
allele count: 1
allele frequency: 7.979572294924992e-5
allele num: 12532
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6404
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6070
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 46360
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3314
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7640
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 592
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.03e0

DP
type: SiteQuality
SIO_000300: 9.17464e5

FS
type: SiteQuality
SIO_000300: 4.561e0

VQSLOD
type: SiteQuality
SIO_000300: -2.766e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.13e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.4e-3

MQRankSum
type: SiteQuality
SIO_000300: -1.109e0

QD
type: SiteQuality
SIO_000300: 1.593e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.694e0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 46580
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 3332
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7668
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.545117428924598e-4
allele num: 6472
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 590
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12536
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.02e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.8e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.895e1

VQSLOD
type: SiteQuality
SIO_000300: -2.008e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.02e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.4e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -3.652e0

DP
type: SiteQuality
SIO_000300: 9.21664e5

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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bin: 5.25e1
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6146
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6584
num of homozygotes: 0

South Asian
type: Population
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allele frequency: 0.0e0
allele num: 12644
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 3418
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 606
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 4.236390595212879e-5
allele num: 47210
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 9.32885e5

ReadPosRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: -2.71e-1

InbreedingCoeff
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MQ
type: SiteQuality
SIO_000300: 5.919e1

QD
type: SiteQuality
SIO_000300: 1.576e1

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
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East Asian
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allele count: 0
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num of homozygotes: 0

Latino
type: Population
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allele frequency: 0.0e0
allele num: 6678
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7776
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European (Non-Finnish)
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allele frequency: 2.103314824162881e-5
allele num: 47544
num of homozygotes: 0

VQSLOD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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MQ
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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QD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 1.35e-1

MQRankSum
type: SiteQuality
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FS
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 9.41418e5

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.75e1
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GenotypeQuality
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GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1250
bin: 9.75e1
variant carriers: 17

GenotypeQuality
all individuals: 1500
bin: 6.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 610
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12674
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3494
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6774
num of homozygotes: 0

East Asian
type: Population
allele count: 16
allele frequency: 2.588159171789065e-3
allele num: 6182
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7804
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.086985558059938e-5
allele num: 47916
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.65e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.085e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.6e-3

DP
type: SiteQuality
SIO_000300: 9.5121e5

VQSLOD
type: SiteQuality
SIO_000300: 1.93e0

MQRankSum
type: SiteQuality
SIO_000300: 1.04e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.33e-1

FS
type: SiteQuality
SIO_000300: 4.902e0

QD
type: SiteQuality
SIO_000300: 1.278e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 5230
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 293
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 146
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GenotypeQuality
all individuals: 1607
bin: 4.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6218
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6834
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 4.162330905306972e-5
allele num: 48050
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3528
num of homozygotes: 0

South Asian
type: Population
allele count: 8
allele frequency: 6.304176516942475e-4
allele num: 12690
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 626
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.560819462227913e-4
allele num: 7810
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.8e-1

MQ
type: SiteQuality
SIO_000300: 5.922e1

DP
type: SiteQuality
SIO_000300: 9.57964e5

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.8e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -1.76e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.127e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.65e-1

FS
type: SiteQuality
SIO_000300: 1.0596e1

QD
type: SiteQuality
SIO_000300: 1.24e1

BaseQRankSum
type: SiteQuality
SIO_000300: 9.0e-1

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 11412
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12690
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 626
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3528
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6218
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6834
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.081165452653486e-5
allele num: 48050
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7810
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.922e1

MQRankSum
type: SiteQuality
SIO_000300: 3.8e-1

FS
type: SiteQuality
SIO_000300: 1.0596e1

VQSLOD
type: SiteQuality
SIO_000300: -1.127e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.65e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.76e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 9.0e-1

DP
type: SiteQuality
SIO_000300: 9.57964e5

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.8e-3

QD
type: SiteQuality
SIO_000300: 1.24e1

GenotypeQuality
all individuals: 18616
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 14

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12912
num of homozygotes: 0

African
type: Population
allele count: 14
allele frequency: 1.730103806228374e-3
allele num: 8092
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 646
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 50162
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3762
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6520
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7362
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.004003e6

QD
type: SiteQuality
SIO_000300: 1.415e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.3e-3

FS
type: SiteQuality
SIO_000300: 3.251e0

VQSLOD
type: SiteQuality
SIO_000300: 1.48e0

BaseQRankSum
type: SiteQuality
SIO_000300: -9.88e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.99e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.37e-1

GenotypeQuality
all individuals: 358
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 358
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variant carriers: 0

GenotypeQuality
all individuals: 554
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 597
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GenotypeQuality
all individuals: 125
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.504302304591131e-5
allele num: 66476
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10378
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16384
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.904e0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.66e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.784161e6

QD
type: SiteQuality
SIO_000300: 1.536e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.039e0

MQRankSum
type: SiteQuality
SIO_000300: 2.92e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

MQ
type: SiteQuality
SIO_000300: 5.732e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.0e-2

GenotypeQuality
all individuals: 2131
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21593
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variant carriers: 0

GenotypeQuality
all individuals: 259
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 1310
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 78
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variant carriers: 0

GenotypeQuality
all individuals: 94
bin: 5.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.503488092374308e-5
allele num: 66512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6586
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16438
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10378
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.794108e6

ClippingRankSum
type: SiteQuality
SIO_000300: 5.0e-1

MQ
type: SiteQuality
SIO_000300: 5.796e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.122e0

MQRankSum
type: SiteQuality
SIO_000300: 1.23e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.017e0

FS
type: SiteQuality
SIO_000300: 8.606999999999999e0

QD
type: SiteQuality
SIO_000300: 2.402e1

VQSLOD
type: SiteQuality
SIO_000300: 3.16e-1

GenotypeQuality
all individuals: 1310
bin: 8.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 9
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 6208
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variant carriers: 0

GenotypeQuality
all individuals: 97
bin: 4.25e1
variant carriers: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.311604253351826e-4
allele num: 8652
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16434
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6586
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66522
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10378
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.3e0

MQ
type: SiteQuality
SIO_000300: 5.784e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.77e-1

QD
type: SiteQuality
SIO_000300: 9.94e0

VQSLOD
type: SiteQuality
SIO_000300: -1.533e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

DP
type: SiteQuality
SIO_000300: 2.794802e6

MQRankSum
type: SiteQuality
SIO_000300: -1.72e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.57e-1

GenotypeQuality
all individuals: 6
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variant carriers: 0

GenotypeQuality
all individuals: 98
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variant carriers: 0

GenotypeQuality
all individuals: 7
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GenotypeQuality
all individuals: 101
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GenotypeQuality
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GenotypeQuality
all individuals: 804
bin: 9.25e1
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GenotypeQuality
all individuals: 24809
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variant carriers: 1

GenotypeQuality
all individuals: 619
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GenotypeQuality
all individuals: 279
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variant carriers: 0

GenotypeQuality
all individuals: 1873
bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10376
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6586
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.503126503126503e-5
allele num: 66528
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16438
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.748e1

FS
type: SiteQuality
SIO_000300: 3.928e0

DP
type: SiteQuality
SIO_000300: 2.795641e6

VQSLOD
type: SiteQuality
SIO_000300: -3.523e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.96e0

QD
type: SiteQuality
SIO_000300: 1.198e1

MQRankSum
type: SiteQuality
SIO_000300: -1.8e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -9.340000000000001e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.09e-1

GenotypeQuality
all individuals: 73
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variant carriers: 0

GenotypeQuality
all individuals: 1300
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GenotypeQuality
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GenotypeQuality
all individuals: 87
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GenotypeQuality
all individuals: 5
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GenotypeQuality
all individuals: 25040
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variant carriers: 720

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 100
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GenotypeQuality
all individuals: 21662
bin: 6.25e1
variant carriers: 0

Latino
type: Population
allele count: 22
allele frequency: 1.900812165197857e-3
allele num: 11574
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 7
allele frequency: 1.062860613422411e-3
allele num: 6586
num of homozygotes: 0

African
type: Population
allele count: 8
allele frequency: 7.710100231303007e-4
allele num: 10376
num of homozygotes: 0

South Asian
type: Population
allele count: 332
allele frequency: 2.018237082066869e-2
allele num: 16450
num of homozygotes: 5

Other
type: Population
allele count: 4
allele frequency: 4.434589800443459e-3
allele num: 902
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 356
allele frequency: 5.35129122448366e-3
allele num: 66526
num of homozygotes: 2

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.13e-1

MQ
type: SiteQuality
SIO_000300: 5.916e1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.7e-2

FS
type: SiteQuality
SIO_000300: 5.39e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.644e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.15e-2

QD
type: SiteQuality
SIO_000300: 1.282e1

MQRankSum
type: SiteQuality
SIO_000300: 6.22e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.57e0

DP
type: SiteQuality
SIO_000300: 2.808242e6

GenotypeQuality
all individuals: 3
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variant carriers: 0

GenotypeQuality
all individuals: 7
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GenotypeQuality
all individuals: 22013
bin: 6.25e1
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GenotypeQuality
all individuals: 164
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GenotypeQuality
all individuals: 93
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GenotypeQuality
all individuals: 616
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GenotypeQuality
all individuals: 1330
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GenotypeQuality
all individuals: 802
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GenotypeQuality
all individuals: 1906
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GenotypeQuality
all individuals: 2172
bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16448
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6584
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.006162633398467e-5
allele num: 66530
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10380
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.808e1

FS
type: SiteQuality
SIO_000300: 2.509e0

MQRankSum
type: SiteQuality
SIO_000300: -8.78e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.54e-1

DP
type: SiteQuality
SIO_000300: 2.787104e6

VQSLOD
type: SiteQuality
SIO_000300: -9.693000000000001e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.6e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.077e0

QD
type: SiteQuality
SIO_000300: 1.178e1

GenotypeQuality
all individuals: 10
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 806
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 136
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24525
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 2204
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 81
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1922
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 621
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 2
allele frequency: 1.728309713100588e-4
allele num: 11572
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.503081316699233e-5
allele num: 66530
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6572
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.632055480639569e-5
allele num: 10382
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16466
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.846e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.87e-1

DP
type: SiteQuality
SIO_000300: 2.788995e6

FS
type: SiteQuality
SIO_000300: 4.75e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -3.37e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 9.6e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.0e-3

QD
type: SiteQuality
SIO_000300: 1.327e1

VQSLOD
type: SiteQuality
SIO_000300: -5.508e-1