X-135488114-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24135488114
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24135488114
    reference: chr 0
allele count: 1
allele frequency: 1.234034676374406e-5
allele num: 81035
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000416526
  ensembl transcript: ENST00000412101
  gene symbol: GPR112
  hgvsc: ENST00000412101.1:c.8303T>C
  hgvsp: ENSP00000416526.1:p.Ile2768Thr
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000377697
  ensembl transcript: ENST00000394141
  gene symbol: GPR112
  hgvsc: ENST00000394141.1:c.8303T>C
  hgvsp: ENSP00000377697.1:p.Ile2768Thr
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000359686
  ensembl transcript: ENST00000370652
  gene symbol: GPR112
  hgvsc: ENST00000370652.1:c.8918T>C
  hgvsp: ENSP00000359686.1:p.Ile2973Thr
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000287534
  ensembl transcript: ENST00000287534
  gene symbol: GPR112
  hgvsc: ENST00000287534.4:c.8177T>C
  hgvsp: ENSP00000287534.4:p.Ile2726Thr
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000377699
  ensembl transcript: ENST00000394143
  gene symbol: GPR112
  hgvsc: ENST00000394143.1:c.8918T>C
  hgvsp: ENSP00000377699.1:p.Ile2973Thr
  variant of: http://identifiers.org/hgnc/18992
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3253
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.25e1
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genotype depth: GenotypeDepth
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  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 3.75e1
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genotype depth: GenotypeDepth
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  bin: 3.25e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 2.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 7981
  bin: 9.75e1
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genotype quality: GenotypeQuality
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  bin: 9.25e1
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genotype quality: GenotypeQuality
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  bin: 4.75e1
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genotype quality: GenotypeQuality
  all individuals: 2597
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Ile2973Thr
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: South Asian
reference allele: T
site quality: DP
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD

X-135488142-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24135488142
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24135488142
    reference: chr 0
allele count: 1
allele frequency: 1.25087561292905e-5
allele num: 79944
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000377699
  ensembl transcript: ENST00000394143
  gene symbol: GPR112
  hgvsc: ENST00000394143.1:c.8935+11C>T
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000377697
  ensembl transcript: ENST00000394141
  gene symbol: GPR112
  hgvsc: ENST00000394141.1:c.8320+11C>T
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000287534
  ensembl transcript: ENST00000287534
  gene symbol: GPR112
  hgvsc: ENST00000287534.4:c.8194+11C>T
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000359686
  ensembl transcript: ENST00000370652
  gene symbol: GPR112
  hgvsc: ENST00000370652.1:c.8935+11C>T
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000416526
  ensembl transcript: ENST00000412101
  gene symbol: GPR112
  hgvsc: ENST00000412101.1:c.8320+11C>T
  variant of: http://identifiers.org/hgnc/18992
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Other
population: African
reference allele: C
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP

X-135488147-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24135488147
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24135488147
    reference: chr 0
allele count: 1
allele frequency: 1.251204284123469e-5
allele num: 79923
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000377697
  ensembl transcript: ENST00000394141
  gene symbol: GPR112
  hgvsc: ENST00000394141.1:c.8320+16T>C
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000287534
  ensembl transcript: ENST00000287534
  gene symbol: GPR112
  hgvsc: ENST00000287534.4:c.8194+16T>C
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000416526
  ensembl transcript: ENST00000412101
  gene symbol: GPR112
  hgvsc: ENST00000412101.1:c.8320+16T>C
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000359686
  ensembl transcript: ENST00000370652
  gene symbol: GPR112
  hgvsc: ENST00000370652.1:c.8935+16T>C
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000377699
  ensembl transcript: ENST00000394143
  gene symbol: GPR112
  hgvsc: ENST00000394143.1:c.8935+16T>C
  variant of: http://identifiers.org/hgnc/18992
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1117
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6340
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.75e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: Latino
population: Other
population: South Asian
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
reference allele: T
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: QD

X-135488148-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24135488148
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24135488148
    reference: chr 0
allele count: 1
allele frequency: 1.25140783381304e-5
allele num: 79910
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000377699
  ensembl transcript: ENST00000394143
  gene symbol: GPR112
  hgvsc: ENST00000394143.1:c.8935+17T>G
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000377697
  ensembl transcript: ENST00000394141
  gene symbol: GPR112
  hgvsc: ENST00000394141.1:c.8320+17T>G
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000287534
  ensembl transcript: ENST00000287534
  gene symbol: GPR112
  hgvsc: ENST00000287534.4:c.8194+17T>G
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000416526
  ensembl transcript: ENST00000412101
  gene symbol: GPR112
  hgvsc: ENST00000412101.1:c.8320+17T>G
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000359686
  ensembl transcript: ENST00000370652
  gene symbol: GPR112
  hgvsc: ENST00000370652.1:c.8935+17T>G
  variant of: http://identifiers.org/hgnc/18992
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6335
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 986
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1353
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: Other
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: T
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: MQ

X-135488158-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24135488158
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24135488158
    reference: chr 0
allele count: 1
allele frequency: 1.254406101431277e-5
allele num: 79719
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000377699
  ensembl transcript: ENST00000394143
  gene symbol: GPR112
  hgvsc: ENST00000394143.1:c.8935+27G>A
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000359686
  ensembl transcript: ENST00000370652
  gene symbol: GPR112
  hgvsc: ENST00000370652.1:c.8935+27G>A
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000377697
  ensembl transcript: ENST00000394141
  gene symbol: GPR112
  hgvsc: ENST00000394141.1:c.8320+27G>A
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000287534
  ensembl transcript: ENST00000287534
  gene symbol: GPR112
  hgvsc: ENST00000287534.4:c.8194+27G>A
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000416526
  ensembl transcript: ENST00000412101
  gene symbol: GPR112
  hgvsc: ENST00000412101.1:c.8320+27G>A
  variant of: http://identifiers.org/hgnc/18992
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2661
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 9.75e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 6.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: Other
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum

X-135488166-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24135488166
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24135488166
    reference: chr 0
allele count: 1
allele frequency: 1.256234061530344e-5
allele num: 79603
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000416526
  ensembl transcript: ENST00000412101
  gene symbol: GPR112
  hgvsc: ENST00000412101.1:c.8320+35C>G
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000287534
  ensembl transcript: ENST00000287534
  gene symbol: GPR112
  hgvsc: ENST00000287534.4:c.8194+35C>G
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000377697
  ensembl transcript: ENST00000394141
  gene symbol: GPR112
  hgvsc: ENST00000394141.1:c.8320+35C>G
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000377699
  ensembl transcript: ENST00000394143
  gene symbol: GPR112
  hgvsc: ENST00000394143.1:c.8935+35C>G
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000359686
  ensembl transcript: ENST00000370652
  gene symbol: GPR112
  hgvsc: ENST00000370652.1:c.8935+35C>G
  variant of: http://identifiers.org/hgnc/18992
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 6278
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 174
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Other
reference allele: C
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD

X-135494403-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24135494403
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24135494403
    reference: chr 0
allele count: 2
allele frequency: 2.54404375755263e-5
allele num: 78615
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000377699
  ensembl transcript: ENST00000394143
  gene symbol: GPR112
  hgvsc: ENST00000394143.1:c.8936-21G>C
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000416526
  ensembl transcript: ENST00000412101
  gene symbol: GPR112
  hgvsc: ENST00000412101.1:c.8321-21G>C
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000287534
  ensembl transcript: ENST00000287534
  gene symbol: GPR112
  hgvsc: ENST00000287534.4:c.8195-1916G>C
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000377697
  ensembl transcript: ENST00000394141
  gene symbol: GPR112
  hgvsc: ENST00000394141.1:c.8321-21G>C
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000359686
  ensembl transcript: ENST00000370652
  gene symbol: GPR112
  hgvsc: ENST00000370652.1:c.8936-21G>C
  variant of: http://identifiers.org/hgnc/18992
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1631
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8500
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: Latino
population: South Asian
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Other
population: African
reference allele: G
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: MQRankSum

X-135494405-CCTT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24135494405
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24135494402
    reference: chr 0
allele count: 1
allele frequency: 1.265038140899948e-5
allele num: 79049
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000416526
  ensembl transcript: ENST00000412101
  gene symbol: GPR112
  hgvsc: ENST00000412101.1:c.8321-10_8321-8delTCT
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000359686
  ensembl transcript: ENST00000370652
  gene symbol: GPR112
  hgvsc: ENST00000370652.1:c.8936-10_8936-8delTCT
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000377699
  ensembl transcript: ENST00000394143
  gene symbol: GPR112
  hgvsc: ENST00000394143.1:c.8936-10_8936-8delTCT
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000287534
  ensembl transcript: ENST00000287534
  gene symbol: GPR112
  hgvsc: ENST00000287534.4:c.8195-1905_8195-1903delTCT
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000377697
  ensembl transcript: ENST00000394141
  gene symbol: GPR112
  hgvsc: ENST00000394141.1:c.8321-10_8321-8delTCT
  variant of: http://identifiers.org/hgnc/18992
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
reference allele: CCTT
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: DP

X-135494425-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24135494425
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24135494425
    reference: chr 0
allele count: 5
allele frequency: 5.961749415748557e-5
allele num: 83868
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000287534
  ensembl transcript: ENST00000287534
  gene symbol: GPR112
  hgvsc: ENST00000287534.4:c.8195-1894A>T
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000359686
  ensembl transcript: ENST00000370652
  gene symbol: GPR112
  hgvsc: ENST00000370652.1:c.8937A>T
  hgvsp: ENST00000370652.1:c.8937A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000416526
  ensembl transcript: ENST00000412101
  gene symbol: GPR112
  hgvsc: ENST00000412101.1:c.8322A>T
  hgvsp: ENST00000412101.1:c.8322A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000377699
  ensembl transcript: ENST00000394143
  gene symbol: GPR112
  hgvsc: ENST00000394143.1:c.8937A>T
  hgvsp: ENST00000394143.1:c.8937A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000377697
  ensembl transcript: ENST00000394141
  gene symbol: GPR112
  hgvsc: ENST00000394141.1:c.8322A>T
  hgvsp: ENST00000394141.1:c.8322A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18992
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
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  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1994
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11800
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3241
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 5.75e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 217
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 5.25e1
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genotype quality: GenotypeQuality
  all individuals: 412
  bin: 3.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 35
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 815
  bin: 3.25e1
  variant carriers: 0
hgvs: c.8937A>T
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: Other
population: South Asian
population: African
population: East Asian
reference allele: A
site quality: DP
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum

X-135494431-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24135494431
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24135494431
    reference: chr 0
allele count: 1
allele frequency: 1.180289170846857e-5
allele num: 84725
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000416526
  ensembl transcript: ENST00000412101
  gene symbol: GPR112
  hgvsc: ENST00000412101.1:c.8328C>A
  hgvsp: ENSP00000416526.1:p.Phe2776Leu
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000359686
  ensembl transcript: ENST00000370652
  gene symbol: GPR112
  hgvsc: ENST00000370652.1:c.8943C>A
  hgvsp: ENSP00000359686.1:p.Phe2981Leu
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000377697
  ensembl transcript: ENST00000394141
  gene symbol: GPR112
  hgvsc: ENST00000394141.1:c.8328C>A
  hgvsp: ENSP00000377697.1:p.Phe2776Leu
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000377699
  ensembl transcript: ENST00000394143
  gene symbol: GPR112
  hgvsc: ENST00000394143.1:c.8943C>A
  hgvsp: ENSP00000377699.1:p.Phe2981Leu
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000287534
  ensembl transcript: ENST00000287534
  gene symbol: GPR112
  hgvsc: ENST00000287534.4:c.8195-1888C>A
  variant of: http://identifiers.org/hgnc/18992
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 6.25e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 3.25e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 850
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  variant carriers: 0
hgvs: p.Phe2981Leu
num of homozygotes: 0
population: South Asian
population: Other
population: Latino
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: QD

X-135494440-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24135494440
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24135494440
    reference: chr 0
allele count: 1
allele frequency: 1.167774105776979e-5
allele num: 85633
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000377699
  ensembl transcript: ENST00000394143
  gene symbol: GPR112
  hgvsc: ENST00000394143.1:c.8952G>A
  hgvsp: ENST00000394143.1:c.8952G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000359686
  ensembl transcript: ENST00000370652
  gene symbol: GPR112
  hgvsc: ENST00000370652.1:c.8952G>A
  hgvsp: ENST00000370652.1:c.8952G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000416526
  ensembl transcript: ENST00000412101
  gene symbol: GPR112
  hgvsc: ENST00000412101.1:c.8337G>A
  hgvsp: ENST00000412101.1:c.8337G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000287534
  ensembl transcript: ENST00000287534
  gene symbol: GPR112
  hgvsc: ENST00000287534.4:c.8195-1879G>A
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000377697
  ensembl transcript: ENST00000394141
  gene symbol: GPR112
  hgvsc: ENST00000394141.1:c.8337G>A
  hgvsp: ENST00000394141.1:c.8337G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18992
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 3950
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genotype quality: GenotypeQuality
  all individuals: 12
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  variant carriers: 0
hgvs: p.Val2984Val
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Other
reference allele: G
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD

X-135494461-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24135494461
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24135494461
    reference: chr 0
allele count: 2
allele frequency: 2.311443959041213e-5
allele num: 86526
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000377699
  ensembl transcript: ENST00000394143
  gene symbol: GPR112
  hgvsc: ENST00000394143.1:c.8973G>T
  hgvsp: ENSP00000377699.1:p.Glu2991Asp
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000359686
  ensembl transcript: ENST00000370652
  gene symbol: GPR112
  hgvsc: ENST00000370652.1:c.8973G>T
  hgvsp: ENSP00000359686.1:p.Glu2991Asp
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000287534
  ensembl transcript: ENST00000287534
  gene symbol: GPR112
  hgvsc: ENST00000287534.4:c.8195-1858G>T
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000377697
  ensembl transcript: ENST00000394141
  gene symbol: GPR112
  hgvsc: ENST00000394141.1:c.8358G>T
  hgvsp: ENSP00000377697.1:p.Glu2786Asp
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000416526
  ensembl transcript: ENST00000412101
  gene symbol: GPR112
  hgvsc: ENST00000412101.1:c.8358G>T
  hgvsp: ENSP00000416526.1:p.Glu2786Asp
  variant of: http://identifiers.org/hgnc/18992
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3403
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 895
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
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genotype quality: GenotypeQuality
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  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 422
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Glu2991Asp
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Latino
population: African
population: Other
population: European (Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: MQRankSum

X-135494468-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24135494468
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24135494468
    reference: chr 0
allele count: 21
allele frequency: 2.42569854342578e-4
allele num: 86573
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000416526
  ensembl transcript: ENST00000412101
  gene symbol: GPR112
  hgvsc: ENST00000412101.1:c.8365C>T
  hgvsp: ENSP00000416526.1:p.Arg2789Trp
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000359686
  ensembl transcript: ENST00000370652
  gene symbol: GPR112
  hgvsc: ENST00000370652.1:c.8980C>T
  hgvsp: ENSP00000359686.1:p.Arg2994Trp
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000377697
  ensembl transcript: ENST00000394141
  gene symbol: GPR112
  hgvsc: ENST00000394141.1:c.8365C>T
  hgvsp: ENSP00000377697.1:p.Arg2789Trp
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000287534
  ensembl transcript: ENST00000287534
  gene symbol: GPR112
  hgvsc: ENST00000287534.4:c.8195-1851C>T
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000377699
  ensembl transcript: ENST00000394143
  gene symbol: GPR112
  hgvsc: ENST00000394143.1:c.8980C>T
  hgvsp: ENSP00000377699.1:p.Arg2994Trp
  variant of: http://identifiers.org/hgnc/18992
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 35328
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 5.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1120
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13580
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3512
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 922
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2379
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  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 224
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  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
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  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1417
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 142
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 542
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 140
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 7.5e0
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genotype quality: GenotypeQuality
  all individuals: 5322
  bin: 9.75e1
  variant carriers: 16
genotype quality: GenotypeQuality
  all individuals: 946
  bin: 7.75e1
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genotype quality: GenotypeQuality
  all individuals: 111
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 165
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4053
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 912
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Arg2994Trp
num of homozygotes: 0
population: Latino
population: Other
population: African
population: European (Finnish)
population: East Asian
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff

X-135494469-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24135494469
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24135494469
    reference: chr 0
allele count: 2
allele frequency: 2.310055672341703e-5
allele num: 86578
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000377697
  ensembl transcript: ENST00000394141
  gene symbol: GPR112
  hgvsc: ENST00000394141.1:c.8366G>A
  hgvsp: ENSP00000377697.1:p.Arg2789Gln
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000287534
  ensembl transcript: ENST00000287534
  gene symbol: GPR112
  hgvsc: ENST00000287534.4:c.8195-1850G>A
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000416526
  ensembl transcript: ENST00000412101
  gene symbol: GPR112
  hgvsc: ENST00000412101.1:c.8366G>A
  hgvsp: ENSP00000416526.1:p.Arg2789Gln
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000377699
  ensembl transcript: ENST00000394143
  gene symbol: GPR112
  hgvsc: ENST00000394143.1:c.8981G>A
  hgvsp: ENSP00000377699.1:p.Arg2994Gln
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000359686
  ensembl transcript: ENST00000370652
  gene symbol: GPR112
  hgvsc: ENST00000370652.1:c.8981G>A
  hgvsp: ENSP00000359686.1:p.Arg2994Gln
  variant of: http://identifiers.org/hgnc/18992
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3449
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35299
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13649
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1151
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genotype depth: GenotypeDepth
  all individuals: 267
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 178
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 902
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
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genotype depth: GenotypeDepth
  all individuals: 2378
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  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 3
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4080
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genotype quality: GenotypeQuality
  all individuals: 5310
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 155
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 219
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 275
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 144
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1469
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genotype quality: GenotypeQuality
  all individuals: 84
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
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genotype quality: GenotypeQuality
  all individuals: 45707
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genotype quality: GenotypeQuality
  all individuals: 173
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 222
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Arg2994Gln
num of homozygotes: 0
population: Other
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: African
population: European (Finnish)
population: Latino
reference allele: G
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP

X-135494483-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24135494483
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24135494483
    reference: chr 0
allele count: 6
allele frequency: 6.943399719949545e-5
allele num: 86413
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000377699
  ensembl transcript: ENST00000394143
  gene symbol: GPR112
  hgvsc: ENST00000394143.1:c.8995A>C
  hgvsp: ENSP00000377699.1:p.Ile2999Leu
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000377697
  ensembl transcript: ENST00000394141
  gene symbol: GPR112
  hgvsc: ENST00000394141.1:c.8380A>C
  hgvsp: ENSP00000377697.1:p.Ile2794Leu
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000287534
  ensembl transcript: ENST00000287534
  gene symbol: GPR112
  hgvsc: ENST00000287534.4:c.8195-1836A>C
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000359686
  ensembl transcript: ENST00000370652
  gene symbol: GPR112
  hgvsc: ENST00000370652.1:c.8995A>C
  hgvsp: ENSP00000359686.1:p.Ile2999Leu
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000416526
  ensembl transcript: ENST00000412101
  gene symbol: GPR112
  hgvsc: ENST00000412101.1:c.8380A>C
  hgvsp: ENSP00000416526.1:p.Ile2794Leu
  variant of: http://identifiers.org/hgnc/18992
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3395
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1324
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 885
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2378
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13853
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34717
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genotype depth: GenotypeDepth
  all individuals: 741
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
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genotype depth: GenotypeDepth
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  variant carriers: 1
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1853
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 271
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genotype quality: GenotypeQuality
  all individuals: 932
  bin: 7.75e1
  variant carriers: 1
hgvs: p.Ile2999Leu
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: African
population: East Asian
population: Other
reference allele: A
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: MQ

X-135494484-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24135494484
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24135494484
    reference: chr 0
allele count: 1
allele frequency: 1.157568180765847e-5
allele num: 86388
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000416526
  ensembl transcript: ENST00000412101
  gene symbol: GPR112
  hgvsc: ENST00000412101.1:c.8381T>A
  hgvsp: ENSP00000416526.1:p.Ile2794Lys
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000377697
  ensembl transcript: ENST00000394141
  gene symbol: GPR112
  hgvsc: ENST00000394141.1:c.8381T>A
  hgvsp: ENSP00000377697.1:p.Ile2794Lys
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000377699
  ensembl transcript: ENST00000394143
  gene symbol: GPR112
  hgvsc: ENST00000394143.1:c.8996T>A
  hgvsp: ENSP00000377699.1:p.Ile2999Lys
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000359686
  ensembl transcript: ENST00000370652
  gene symbol: GPR112
  hgvsc: ENST00000370652.1:c.8996T>A
  hgvsp: ENSP00000359686.1:p.Ile2999Lys
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000287534
  ensembl transcript: ENST00000287534
  gene symbol: GPR112
  hgvsc: ENST00000287534.4:c.8195-1835T>A
  variant of: http://identifiers.org/hgnc/18992
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2377
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 881
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 780
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 223
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 5.25e1
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genotype depth: GenotypeDepth
  all individuals: 1346
  bin: 7.5e0
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34664
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 4078
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genotype quality: GenotypeQuality
  all individuals: 271
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45423
  bin: 6.25e1
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genotype quality: GenotypeQuality
  all individuals: 245
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 127
  bin: 3.75e1
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genotype quality: GenotypeQuality
  all individuals: 165
  bin: 2.75e1
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genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 156
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Ile2999Lys
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Other
population: South Asian
population: Latino
reference allele: T
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum

X-135494492-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24135494492
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24135494492
    reference: chr 0
allele count: 1
allele frequency: 1.161683046397621e-5
allele num: 86082
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000416526
  ensembl transcript: ENST00000412101
  gene symbol: GPR112
  hgvsc: ENST00000412101.1:c.8389T>A
  hgvsp: ENSP00000416526.1:p.Cys2797Ser
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000287534
  ensembl transcript: ENST00000287534
  gene symbol: GPR112
  hgvsc: ENST00000287534.4:c.8195-1827T>A
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000377697
  ensembl transcript: ENST00000394141
  gene symbol: GPR112
  hgvsc: ENST00000394141.1:c.8389T>A
  hgvsp: ENSP00000377697.1:p.Cys2797Ser
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000359686
  ensembl transcript: ENST00000370652
  gene symbol: GPR112
  hgvsc: ENST00000370652.1:c.9004T>A
  hgvsp: ENSP00000359686.1:p.Cys3002Ser
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000377699
  ensembl transcript: ENST00000394143
  gene symbol: GPR112
  hgvsc: ENST00000394143.1:c.9004T>A
  hgvsp: ENSP00000377699.1:p.Cys3002Ser
  variant of: http://identifiers.org/hgnc/18992
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3382
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
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genotype depth: GenotypeDepth
  all individuals: 469
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genotype depth: GenotypeDepth
  all individuals: 33906
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 263
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1128
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 878
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1634
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genotype depth: GenotypeDepth
  all individuals: 301
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 7.25e1
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genotype depth: GenotypeDepth
  all individuals: 510
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genotype depth: GenotypeDepth
  all individuals: 355
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 179
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genotype depth: GenotypeDepth
  all individuals: 225
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 1.75e1
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genotype quality: GenotypeQuality
  all individuals: 5307
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 4039
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 171
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 243
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Cys3002Ser
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Other
population: South Asian
population: Latino
reference allele: T
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum

X-135494496-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24135494496
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24135494496
    reference: chr 0
allele count: 1
allele frequency: 1.1648223645894e-5
allele num: 85850
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000377697
  ensembl transcript: ENST00000394141
  gene symbol: GPR112
  hgvsc: ENST00000394141.1:c.8393G>A
  hgvsp: ENSP00000377697.1:p.Cys2798Tyr
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000416526
  ensembl transcript: ENST00000412101
  gene symbol: GPR112
  hgvsc: ENST00000412101.1:c.8393G>A
  hgvsp: ENSP00000416526.1:p.Cys2798Tyr
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000359686
  ensembl transcript: ENST00000370652
  gene symbol: GPR112
  hgvsc: ENST00000370652.1:c.9008G>A
  hgvsp: ENSP00000359686.1:p.Cys3003Tyr
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000377699
  ensembl transcript: ENST00000394143
  gene symbol: GPR112
  hgvsc: ENST00000394143.1:c.9008G>A
  hgvsp: ENSP00000377699.1:p.Cys3003Tyr
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000287534
  ensembl transcript: ENST00000287534
  gene symbol: GPR112
  hgvsc: ENST00000287534.4:c.8195-1823G>A
  variant of: http://identifiers.org/hgnc/18992
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1859
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33447
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1351
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 217
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13850
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2377
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 302
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3405
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genotype depth: GenotypeDepth
  all individuals: 223
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2898
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 10
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genotype quality: GenotypeQuality
  all individuals: 538
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genotype quality: GenotypeQuality
  all individuals: 179
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 5309
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genotype quality: GenotypeQuality
  all individuals: 174
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 253
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Cys3003Tyr
num of homozygotes: 0
population: Other
population: European (Finnish)
population: South Asian
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
reference allele: G
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff

X-135494497-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24135494497
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24135494497
    reference: chr 0
allele count: 1
allele frequency: 1.165107364643652e-5
allele num: 85829
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000416526
  ensembl transcript: ENST00000412101
  gene symbol: GPR112
  hgvsc: ENST00000412101.1:c.8394T>C
  hgvsp: ENST00000412101.1:c.8394T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000377697
  ensembl transcript: ENST00000394141
  gene symbol: GPR112
  hgvsc: ENST00000394141.1:c.8394T>C
  hgvsp: ENST00000394141.1:c.8394T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000377699
  ensembl transcript: ENST00000394143
  gene symbol: GPR112
  hgvsc: ENST00000394143.1:c.9009T>C
  hgvsp: ENST00000394143.1:c.9009T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000359686
  ensembl transcript: ENST00000370652
  gene symbol: GPR112
  hgvsc: ENST00000370652.1:c.9009T>C
  hgvsp: ENST00000370652.1:c.9009T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000287534
  ensembl transcript: ENST00000287534
  gene symbol: GPR112
  hgvsc: ENST00000287534.4:c.8195-1822T>C
  variant of: http://identifiers.org/hgnc/18992
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1862
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 879
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 4006
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Cys3003Cys
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: South Asian
population: Other
population: Latino
population: European (Finnish)
population: East Asian
reference allele: T
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP

X-135494500-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24135494500
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24135494500
    reference: chr 0
allele count: 10
allele frequency: 1.167297007050474e-4
allele num: 85668
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000287534
  ensembl transcript: ENST00000287534
  gene symbol: GPR112
  hgvsc: ENST00000287534.4:c.8195-1819G>A
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000416526
  ensembl transcript: ENST00000412101
  gene symbol: GPR112
  hgvsc: ENST00000412101.1:c.8397G>A
  hgvsp: ENST00000412101.1:c.8397G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000359686
  ensembl transcript: ENST00000370652
  gene symbol: GPR112
  hgvsc: ENST00000370652.1:c.9012G>A
  hgvsp: ENST00000370652.1:c.9012G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000377699
  ensembl transcript: ENST00000394143
  gene symbol: GPR112
  hgvsc: ENST00000394143.1:c.9012G>A
  hgvsp: ENST00000394143.1:c.9012G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000377697
  ensembl transcript: ENST00000394141
  gene symbol: GPR112
  hgvsc: ENST00000394141.1:c.8397G>A
  hgvsp: ENST00000394141.1:c.8397G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18992
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 13849
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 355
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
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  variant carriers: 1
genotype depth: GenotypeDepth
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  bin: 3.25e1
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genotype depth: GenotypeDepth
  all individuals: 1618
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 878
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.25e1
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genotype depth: GenotypeDepth
  all individuals: 179
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 134
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3267
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 531
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 298
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 885
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 272
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3981
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5322
  bin: 9.75e1
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 277
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Gly3004Gly
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: South Asian
population: Other
population: East Asian
population: Latino
reference allele: G
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: QD

X-135494500-GT-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24135494500
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24135494499
    reference: chr 0
allele count: 9
allele frequency: 1.050567306345427e-4
allele num: 85668
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000359686
  ensembl transcript: ENST00000370652
  gene symbol: GPR112
  hgvsc: ENST00000370652.1:c.9013delT
  hgvsp: ENSP00000359686.1:p.Trp3005GlyfsTer16
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000377697
  ensembl transcript: ENST00000394141
  gene symbol: GPR112
  hgvsc: ENST00000394141.1:c.8398delT
  hgvsp: ENSP00000377697.1:p.Trp2800GlyfsTer16
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000416526
  ensembl transcript: ENST00000412101
  gene symbol: GPR112
  hgvsc: ENST00000412101.1:c.8398delT
  hgvsp: ENSP00000416526.1:p.Trp2800GlyfsTer16
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000377699
  ensembl transcript: ENST00000394143
  gene symbol: GPR112
  hgvsc: ENST00000394143.1:c.9013delT
  hgvsp: ENSP00000377699.1:p.Trp3005GlyfsTer16
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000287534
  ensembl transcript: ENST00000287534
  gene symbol: GPR112
  hgvsc: ENST00000287534.4:c.8195-1818delT
  variant of: http://identifiers.org/hgnc/18992
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3381
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 878
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2030
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 32976
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2379
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1618
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 532
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 4.75e1
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13849
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 179
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 4.25e1
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genotype quality: GenotypeQuality
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  bin: 5.25e1
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genotype quality: GenotypeQuality
  all individuals: 250
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 885
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 209
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3267
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 298
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 134
  bin: 5.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 7
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genotype quality: GenotypeQuality
  all individuals: 43883
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 272
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5322
  bin: 9.75e1
  variant carriers: 8
hgvs: p.Trp3005GlyfsTer16
num of homozygotes: 0
population: South Asian
population: Other
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: East Asian
reference allele: GT
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum

X-135494502-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24135494502
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24135494502
    reference: chr 0
allele count: 0
allele frequency: 0.0e0
allele num: 85399
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000359686
  ensembl transcript: ENST00000370652
  gene symbol: GPR112
  hgvsc: ENST00000370652.1:c.9014G>A
  hgvsp: ENSP00000359686.1:p.Trp3005Ter
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000287534
  ensembl transcript: ENST00000287534
  gene symbol: GPR112
  hgvsc: ENST00000287534.4:c.8195-1817G>A
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000377697
  ensembl transcript: ENST00000394141
  gene symbol: GPR112
  hgvsc: ENST00000394141.1:c.8399G>A
  hgvsp: ENSP00000377697.1:p.Trp2800Ter
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000377699
  ensembl transcript: ENST00000394143
  gene symbol: GPR112
  hgvsc: ENST00000394143.1:c.9014G>A
  hgvsp: ENSP00000377699.1:p.Trp3005Ter
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000416526
  ensembl transcript: ENST00000412101
  gene symbol: GPR112
  hgvsc: ENST00000412101.1:c.8399G>A
  hgvsp: ENSP00000416526.1:p.Trp2800Ter
  variant of: http://identifiers.org/hgnc/18992
canonical: true
consequence: stop gained
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1961
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 879
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2274
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13752
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32432
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3387
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2379
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 342
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 128
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 182
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 851
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 229
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 883
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 293
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3781
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 362
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 208
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Trp3005Ter
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: G
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum

X-135494502-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24135494502
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24135494502
    reference: chr 0
allele count: 0
allele frequency: 0.0e0
allele num: 85399
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000359686
  ensembl transcript: ENST00000370652
  gene symbol: GPR112
  hgvsc: ENST00000370652.1:c.9014G>T
  hgvsp: ENSP00000359686.1:p.Trp3005Leu
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000377697
  ensembl transcript: ENST00000394141
  gene symbol: GPR112
  hgvsc: ENST00000394141.1:c.8399G>T
  hgvsp: ENSP00000377697.1:p.Trp2800Leu
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000416526
  ensembl transcript: ENST00000412101
  gene symbol: GPR112
  hgvsc: ENST00000412101.1:c.8399G>T
  hgvsp: ENSP00000416526.1:p.Trp2800Leu
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000377699
  ensembl transcript: ENST00000394143
  gene symbol: GPR112
  hgvsc: ENST00000394143.1:c.9014G>T
  hgvsp: ENSP00000377699.1:p.Trp3005Leu
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000287534
  ensembl transcript: ENST00000287534
  gene symbol: GPR112
  hgvsc: ENST00000287534.4:c.8195-1817G>T
  variant of: http://identifiers.org/hgnc/18992
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3387
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32432
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 879
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1961
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13752
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 512
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 271
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42979
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 362
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 293
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 527
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 342
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 883
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Trp3005Leu
num of homozygotes: 0
population: African
population: Other
population: Latino
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: European (Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: MQ

X-135494508-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24135494508
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24135494508
    reference: chr 0
allele count: 0
allele frequency: 0.0e0
allele num: 84979
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000377697
  ensembl transcript: ENST00000394141
  gene symbol: GPR112
  hgvsc: ENST00000394141.1:c.8405G>A
  hgvsp: ENSP00000377697.1:p.Arg2802Gln
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000359686
  ensembl transcript: ENST00000370652
  gene symbol: GPR112
  hgvsc: ENST00000370652.1:c.9020G>A
  hgvsp: ENSP00000359686.1:p.Arg3007Gln
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000287534
  ensembl transcript: ENST00000287534
  gene symbol: GPR112
  hgvsc: ENST00000287534.4:c.8195-1811G>A
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000377699
  ensembl transcript: ENST00000394143
  gene symbol: GPR112
  hgvsc: ENST00000394143.1:c.9020G>A
  hgvsp: ENSP00000377699.1:p.Arg3007Gln
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000416526
  ensembl transcript: ENST00000412101
  gene symbol: GPR112
  hgvsc: ENST00000412101.1:c.8405G>A
  hgvsp: ENSP00000416526.1:p.Arg2802Gln
  variant of: http://identifiers.org/hgnc/18992
canonical: true
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 31619
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 518
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3411
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2466
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13627
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2653
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2377
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 887
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4538
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 252
  bin: 3.75e1
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genotype quality: GenotypeQuality
  all individuals: 327
  bin: 3.25e1
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genotype quality: GenotypeQuality
  all individuals: 31
  bin: 7.5e0
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genotype quality: GenotypeQuality
  all individuals: 515
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 271
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 453
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 210
  bin: 8.75e1
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genotype quality: GenotypeQuality
  all individuals: 23
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 181
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5306
  bin: 9.75e1
  variant carriers: 0
hgvs: p.Arg3007Gln
num of homozygotes: 0
population: East Asian
population: African
population: European (Finnish)
population: Other
population: South Asian
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ

X-135494513-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24135494513
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24135494513
    reference: chr 0
allele count: 1
allele frequency: 1.185072822724956e-5
allele num: 84383
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000416526
  ensembl transcript: ENST00000412101
  gene symbol: GPR112
  hgvsc: ENST00000412101.1:c.8410G>A
  hgvsp: ENSP00000416526.1:p.Asp2804Asn
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000377699
  ensembl transcript: ENST00000394143
  gene symbol: GPR112
  hgvsc: ENST00000394143.1:c.9025G>A
  hgvsp: ENSP00000377699.1:p.Asp3009Asn
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000377697
  ensembl transcript: ENST00000394141
  gene symbol: GPR112
  hgvsc: ENST00000394141.1:c.8410G>A
  hgvsp: ENSP00000377697.1:p.Asp2804Asn
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000287534
  ensembl transcript: ENST00000287534
  gene symbol: GPR112
  hgvsc: ENST00000287534.4:c.8195-1806G>A
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000359686
  ensembl transcript: ENST00000370652
  gene symbol: GPR112
  hgvsc: ENST00000370652.1:c.9025G>A
  hgvsp: ENSP00000359686.1:p.Asp3009Asn
  variant of: http://identifiers.org/hgnc/18992
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3384
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13483
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30273
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2377
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3316
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 881
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 698
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3218
  bin: 7.5e0
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 263
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genotype depth: GenotypeDepth
  all individuals: 217
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genotype depth: GenotypeDepth
  all individuals: 171
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genotype depth: GenotypeDepth
  all individuals: 329
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genotype quality: GenotypeQuality
  all individuals: 210
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genotype quality: GenotypeQuality
  all individuals: 270
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genotype quality: GenotypeQuality
  all individuals: 119
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genotype quality: GenotypeQuality
  all individuals: 420
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genotype quality: GenotypeQuality
  all individuals: 5786
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genotype quality: GenotypeQuality
  all individuals: 39
  bin: 1.25e1
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genotype quality: GenotypeQuality
  all individuals: 19
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genotype quality: GenotypeQuality
  all individuals: 853
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 52
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genotype quality: GenotypeQuality
  all individuals: 40919
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genotype quality: GenotypeQuality
  all individuals: 268
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3787
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Asp3009Asn
num of homozygotes: 0
population: European (Finnish)
population: African
population: South Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: East Asian
reference allele: G
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: QD

X-135494524-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24135494524
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24135494524
    reference: chr 0
allele count: 1
allele frequency: 1.210873645335109e-5
allele num: 82585
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000359686
  ensembl transcript: ENST00000370652
  gene symbol: GPR112
  hgvsc: ENST00000370652.1:c.9036T>C
  hgvsp: ENST00000370652.1:c.9036T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000416526
  ensembl transcript: ENST00000412101
  gene symbol: GPR112
  hgvsc: ENST00000412101.1:c.8421T>C
  hgvsp: ENST00000412101.1:c.8421T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000287534
  ensembl transcript: ENST00000287534
  gene symbol: GPR112
  hgvsc: ENST00000287534.4:c.8195-1795T>C
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000377699
  ensembl transcript: ENST00000394143
  gene symbol: GPR112
  hgvsc: ENST00000394143.1:c.9036T>C
  hgvsp: ENST00000394143.1:c.9036T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000377697
  ensembl transcript: ENST00000394141
  gene symbol: GPR112
  hgvsc: ENST00000394141.1:c.8421T>C
  hgvsp: ENST00000394141.1:c.8421T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18992
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1069
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6199
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12660
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2377
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3313
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26218
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 872
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
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genotype depth: GenotypeDepth
  all individuals: 225
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 4835
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
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genotype quality: GenotypeQuality
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  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 425
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3562
  bin: 6.75e1
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genotype quality: GenotypeQuality
  all individuals: 5305
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 41
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 161
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 415
  bin: 3.75e1
  variant carriers: 0
hgvs: c.9036T>C
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Other
population: Latino
population: East Asian
population: African
population: European (Finnish)
reference allele: T
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD

X-135494532-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24135494532
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24135494532
    reference: chr 0
allele count: 6
allele frequency: 7.403933956909104e-5
allele num: 81038
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000416526
  ensembl transcript: ENST00000412101
  gene symbol: GPR112
  hgvsc: ENST00000412101.1:c.8422+7T>C
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000377699
  ensembl transcript: ENST00000394143
  gene symbol: GPR112
  hgvsc: ENST00000394143.1:c.9037+7T>C
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000287534
  ensembl transcript: ENST00000287534
  gene symbol: GPR112
  hgvsc: ENST00000287534.4:c.8195-1787T>C
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000359686
  ensembl transcript: ENST00000370652
  gene symbol: GPR112
  hgvsc: ENST00000370652.1:c.9037+7T>C
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000377697
  ensembl transcript: ENST00000394141
  gene symbol: GPR112
  hgvsc: ENST00000394141.1:c.8422+7T>C
  variant of: http://identifiers.org/hgnc/18992
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 873
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22218
  bin: 2.25e1
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genotype depth: GenotypeDepth
  all individuals: 9316
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 1426
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 264
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2376
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 3225
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 1613
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 801
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  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 66
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  variant carriers: 0
hgvs: c.9037+7T>C
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: African
population: European (Non-Finnish)
population: Latino
population: South Asian
population: Other
reference allele: T
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum

X-135494535-CA-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24135494535
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24135494534
    reference: chr 0
allele count: 1
allele frequency: 1.247598373131721e-5
allele num: 80154
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000416526
  ensembl transcript: ENST00000412101
  gene symbol: GPR112
  hgvsc: ENST00000412101.1:c.8422+11delA
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000377699
  ensembl transcript: ENST00000394143
  gene symbol: GPR112
  hgvsc: ENST00000394143.1:c.9037+11delA
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000377697
  ensembl transcript: ENST00000394141
  gene symbol: GPR112
  hgvsc: ENST00000394141.1:c.8422+11delA
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000287534
  ensembl transcript: ENST00000287534
  gene symbol: GPR112
  hgvsc: ENST00000287534.4:c.8195-1783delA
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000359686
  ensembl transcript: ENST00000370652
  gene symbol: GPR112
  hgvsc: ENST00000370652.1:c.9037+11delA
  variant of: http://identifiers.org/hgnc/18992
canonical: true
consequence: intron
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 874
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20100
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2376
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  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10949
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: South Asian
population: African
population: East Asian
population: Other
reference allele: CA
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum

X-135494541-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24135494541
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24135494541
    reference: chr 0
allele count: 1
allele frequency: 1.27111642155305e-5
allele num: 78671
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000377699
  ensembl transcript: ENST00000394143
  gene symbol: GPR112
  hgvsc: ENST00000394143.1:c.9037+16G>A
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000359686
  ensembl transcript: ENST00000370652
  gene symbol: GPR112
  hgvsc: ENST00000370652.1:c.9037+16G>A
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000287534
  ensembl transcript: ENST00000287534
  gene symbol: GPR112
  hgvsc: ENST00000287534.4:c.8195-1778G>A
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000377697
  ensembl transcript: ENST00000394141
  gene symbol: GPR112
  hgvsc: ENST00000394141.1:c.8422+16G>A
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000416526
  ensembl transcript: ENST00000412101
  gene symbol: GPR112
  hgvsc: ENST00000412101.1:c.8422+16G>A
  variant of: http://identifiers.org/hgnc/18992
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 879
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Other
population: African
population: European (Finnish)
population: East Asian
population: Latino
reference allele: G
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
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X-135494555-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24135494555
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24135494555
    reference: chr 0
allele count: 1
allele frequency: 1.326594234621456e-5
allele num: 75381
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000287534
  ensembl transcript: ENST00000287534
  gene symbol: GPR112
  hgvsc: ENST00000287534.4:c.8195-1764A>C
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000377697
  ensembl transcript: ENST00000394141
  gene symbol: GPR112
  hgvsc: ENST00000394141.1:c.8422+30A>C
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000416526
  ensembl transcript: ENST00000412101
  gene symbol: GPR112
  hgvsc: ENST00000412101.1:c.8422+30A>C
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000377699
  ensembl transcript: ENST00000394143
  gene symbol: GPR112
  hgvsc: ENST00000394143.1:c.9037+30A>C
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000359686
  ensembl transcript: ENST00000370652
  gene symbol: GPR112
  hgvsc: ENST00000370652.1:c.9037+30A>C
  variant of: http://identifiers.org/hgnc/18992
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7592
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: South Asian
population: African
reference allele: A
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: MQ

X-135494561-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24135494561
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24135494561
    reference: chr 0
allele count: 1
allele frequency: 1.38060525734482e-5
allele num: 72432
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000377699
  ensembl transcript: ENST00000394143
  gene symbol: GPR112
  hgvsc: ENST00000394143.1:c.9037+36C>A
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000287534
  ensembl transcript: ENST00000287534
  gene symbol: GPR112
  hgvsc: ENST00000287534.4:c.8195-1758C>A
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000359686
  ensembl transcript: ENST00000370652
  gene symbol: GPR112
  hgvsc: ENST00000370652.1:c.9037+36C>A
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000377697
  ensembl transcript: ENST00000394141
  gene symbol: GPR112
  hgvsc: ENST00000394141.1:c.8422+36C>A
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000416526
  ensembl transcript: ENST00000412101
  gene symbol: GPR112
  hgvsc: ENST00000412101.1:c.8422+36C>A
  variant of: http://identifiers.org/hgnc/18992
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 814
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: Latino
population: African
population: Other
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: C
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum

X-135494565-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24135494565
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24135494565
    reference: chr 0
allele count: 0
allele frequency: 0.0e0
allele num: 71578
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000287534
  ensembl transcript: ENST00000287534
  gene symbol: GPR112
  hgvsc: ENST00000287534.4:c.8195-1754T>C
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000359686
  ensembl transcript: ENST00000370652
  gene symbol: GPR112
  hgvsc: ENST00000370652.1:c.9037+40T>C
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000377697
  ensembl transcript: ENST00000394141
  gene symbol: GPR112
  hgvsc: ENST00000394141.1:c.8422+40T>C
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000377699
  ensembl transcript: ENST00000394143
  gene symbol: GPR112
  hgvsc: ENST00000394143.1:c.9037+40T>C
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000416526
  ensembl transcript: ENST00000412101
  gene symbol: GPR112
  hgvsc: ENST00000412101.1:c.8422+40T>C
  variant of: http://identifiers.org/hgnc/18992
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 1
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Other
population: South Asian
population: African
population: Latino
population: European (Non-Finnish)
reference allele: T
site quality: DP
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ

X-135494566-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24135494566
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24135494566
    reference: chr 0
allele count: 1
allele frequency: 1.416791816610467e-5
allele num: 70582
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000416526
  ensembl transcript: ENST00000412101
  gene symbol: GPR112
  hgvsc: ENST00000412101.1:c.8422+41T>C
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000377697
  ensembl transcript: ENST00000394141
  gene symbol: GPR112
  hgvsc: ENST00000394141.1:c.8422+41T>C
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000359686
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  gene symbol: GPR112
  hgvsc: ENST00000370652.1:c.9037+41T>C
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: true
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  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000377699
  ensembl transcript: ENST00000394143
  gene symbol: GPR112
  hgvsc: ENST00000394143.1:c.9037+41T>C
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
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  ensembl gene: ENSG00000156920
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  gene symbol: GPR112
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  variant of: http://identifiers.org/hgnc/18992
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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population: South Asian
population: East Asian
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: VQSLOD
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X-135496269-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24135496269
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24135496269
    reference: chr 0
allele count: 2
allele frequency: 2.481204873086371e-5
allele num: 80606
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000377699
  ensembl transcript: ENST00000394143
  gene symbol: GPR112
  hgvsc: ENST00000394143.1:c.9038-50A>G
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000359686
  ensembl transcript: ENST00000370652
  gene symbol: GPR112
  hgvsc: ENST00000370652.1:c.9038-50A>G
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000416526
  ensembl transcript: ENST00000412101
  gene symbol: GPR112
  hgvsc: ENST00000412101.1:c.8423-50A>G
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
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  ensembl gene: ENSG00000156920
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  gene symbol: GPR112
  hgvsc: ENST00000394141.1:c.8423-50A>G
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
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  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000287534
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  gene symbol: GPR112
  hgvsc: ENST00000287534.4:c.8195-50A>G
  variant of: http://identifiers.org/hgnc/18992
canonical: true
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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num of homozygotes: 0
population: African
population: Other
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Latino
reference allele: A
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
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site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
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X-135496289-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24135496289
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24135496289
    reference: chr 0
allele count: 2
allele frequency: 2.467155985937211e-5
allele num: 81065
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000377699
  ensembl transcript: ENST00000394143
  gene symbol: GPR112
  hgvsc: ENST00000394143.1:c.9038-30T>C
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000359686
  ensembl transcript: ENST00000370652
  gene symbol: GPR112
  hgvsc: ENST00000370652.1:c.9038-30T>C
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000287534
  ensembl transcript: ENST00000287534
  gene symbol: GPR112
  hgvsc: ENST00000287534.4:c.8195-30T>C
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
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  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000416526
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  gene symbol: GPR112
  hgvsc: ENST00000412101.1:c.8423-30T>C
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000377697
  ensembl transcript: ENST00000394141
  gene symbol: GPR112
  hgvsc: ENST00000394141.1:c.8423-30T>C
  variant of: http://identifiers.org/hgnc/18992
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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num of homozygotes: 0
population: African
population: East Asian
population: South Asian
population: Latino
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: T
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
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site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
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X-135496307-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24135496307
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24135496307
    reference: chr 0
allele count: 4
allele frequency: 4.853662088045431e-5
allele num: 82412
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000287534
  ensembl transcript: ENST00000287534
  gene symbol: GPR112
  hgvsc: ENST00000287534.4:c.8195-12G>T
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000416526
  ensembl transcript: ENST00000412101
  gene symbol: GPR112
  hgvsc: ENST00000412101.1:c.8423-12G>T
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000377697
  ensembl transcript: ENST00000394141
  gene symbol: GPR112
  hgvsc: ENST00000394141.1:c.8423-12G>T
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
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  ensembl protein: ENSP00000359686
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  hgvsc: ENST00000370652.1:c.9038-12G>T
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: true
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  ensembl protein: ENSP00000377699
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  gene symbol: GPR112
  hgvsc: ENST00000394143.1:c.9038-12G>T
  variant of: http://identifiers.org/hgnc/18992
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 7.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 221
  bin: 2.75e1
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genotype quality: GenotypeQuality
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  bin: 4.25e1
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genotype quality: GenotypeQuality
  all individuals: 19
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: African
population: South Asian
population: Latino
population: Other
population: European (Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: FS

X-135496311-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24135496311
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24135496311
    reference: chr 0
allele count: 1
allele frequency: 1.206330824165219e-5
allele num: 82896
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000377699
  ensembl transcript: ENST00000394143
  gene symbol: GPR112
  hgvsc: ENST00000394143.1:c.9038-8C>T
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000416526
  ensembl transcript: ENST00000412101
  gene symbol: GPR112
  hgvsc: ENST00000412101.1:c.8423-8C>T
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000377697
  ensembl transcript: ENST00000394141
  gene symbol: GPR112
  hgvsc: ENST00000394141.1:c.8423-8C>T
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000287534
  ensembl transcript: ENST00000287534
  gene symbol: GPR112
  hgvsc: ENST00000287534.4:c.8195-8C>T
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000359686
  ensembl transcript: ENST00000370652
  gene symbol: GPR112
  hgvsc: ENST00000370652.1:c.9038-8C>T
  variant of: http://identifiers.org/hgnc/18992
canonical: true
consequence: splice region
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 7737
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 179
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  variant carriers: 0
hgvs: c.9038-8C>T
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Latino
population: East Asian
population: Other
population: African
reference allele: C
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: QD

X-135496323-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24135496323
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24135496323
    reference: chr 0
allele count: 4
allele frequency: 4.756129461843952e-5
allele num: 84102
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000287534
  ensembl transcript: ENST00000287534
  gene symbol: GPR112
  hgvsc: ENST00000287534.4:c.8199G>A
  hgvsp: ENST00000287534.4:c.8199G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000377697
  ensembl transcript: ENST00000394141
  gene symbol: GPR112
  hgvsc: ENST00000394141.1:c.8427G>A
  hgvsp: ENST00000394141.1:c.8427G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000416526
  ensembl transcript: ENST00000412101
  gene symbol: GPR112
  hgvsc: ENST00000412101.1:c.8427G>A
  hgvsp: ENST00000412101.1:c.8427G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000359686
  ensembl transcript: ENST00000370652
  gene symbol: GPR112
  hgvsc: ENST00000370652.1:c.9042G>A
  hgvsp: ENST00000370652.1:c.9042G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000377699
  ensembl transcript: ENST00000394143
  gene symbol: GPR112
  hgvsc: ENST00000394143.1:c.9042G>A
  hgvsp: ENST00000394143.1:c.9042G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18992
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2863
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
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genotype depth: GenotypeDepth
  all individuals: 4316
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 1534
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  variant carriers: 0
hgvs: p.Gly3014Gly
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Finnish)
population: Latino
population: African
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: DP
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD

X-135496325-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24135496325
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24135496325
    reference: chr 0
allele count: 3
allele frequency: 3.562776115148924e-5
allele num: 84204
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000416526
  ensembl transcript: ENST00000412101
  gene symbol: GPR112
  hgvsc: ENST00000412101.1:c.8429G>A
  hgvsp: ENSP00000416526.1:p.Ser2810Asn
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000359686
  ensembl transcript: ENST00000370652
  gene symbol: GPR112
  hgvsc: ENST00000370652.1:c.9044G>A
  hgvsp: ENSP00000359686.1:p.Ser3015Asn
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000377697
  ensembl transcript: ENST00000394141
  gene symbol: GPR112
  hgvsc: ENST00000394141.1:c.8429G>A
  hgvsp: ENSP00000377697.1:p.Ser2810Asn
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000377699
  ensembl transcript: ENST00000394143
  gene symbol: GPR112
  hgvsc: ENST00000394143.1:c.9044G>A
  hgvsp: ENSP00000377699.1:p.Ser3015Asn
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000287534
  ensembl transcript: ENST00000287534
  gene symbol: GPR112
  hgvsc: ENST00000287534.4:c.8201G>A
  hgvsp: ENSP00000287534.4:p.Ser2734Asn
  variant of: http://identifiers.org/hgnc/18992
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2863
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4316
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 2487
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  variant carriers: 0
hgvs: p.Ser3015Asn
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: East Asian
population: African
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD

X-135496326-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24135496326
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24135496326
    reference: chr 0
allele count: 287
allele frequency: 3.406245178442147e-3
allele num: 84257
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000377699
  ensembl transcript: ENST00000394143
  gene symbol: GPR112
  hgvsc: ENST00000394143.1:c.9045C>A
  hgvsp: ENSP00000377699.1:p.Ser3015Arg
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000287534
  ensembl transcript: ENST00000287534
  gene symbol: GPR112
  hgvsc: ENST00000287534.4:c.8202C>A
  hgvsp: ENSP00000287534.4:p.Ser2734Arg
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000377697
  ensembl transcript: ENST00000394141
  gene symbol: GPR112
  hgvsc: ENST00000394141.1:c.8430C>A
  hgvsp: ENSP00000377697.1:p.Ser2810Arg
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000359686
  ensembl transcript: ENST00000370652
  gene symbol: GPR112
  hgvsc: ENST00000370652.1:c.9045C>A
  hgvsp: ENSP00000359686.1:p.Ser3015Arg
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000416526
  ensembl transcript: ENST00000412101
  gene symbol: GPR112
  hgvsc: ENST00000412101.1:c.8430C>A
  hgvsp: ENSP00000416526.1:p.Ser2810Arg
  variant of: http://identifiers.org/hgnc/18992
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 11346
  bin: 2.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 4304
  bin: 4.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 6722
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 1.75e1
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genotype depth: GenotypeDepth
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  bin: 8.75e1
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genotype depth: GenotypeDepth
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  bin: 9.75e1
  variant carriers: 158
genotype depth: GenotypeDepth
  all individuals: 2903
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 480
  bin: 9.25e1
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genotype depth: GenotypeDepth
  all individuals: 2305
  bin: 6.25e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 3303
  bin: 5.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3748
  bin: 4.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 7879
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 848
  bin: 8.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 1481
  bin: 7.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 1857
  bin: 6.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 2854
  bin: 5.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 1103
  bin: 7.75e1
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genotype depth: GenotypeDepth
  all individuals: 5287
  bin: 3.75e1
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genotype quality: GenotypeQuality
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  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3098
  bin: 7.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 29087
  bin: 9.75e1
  variant carriers: 267
genotype quality: GenotypeQuality
  all individuals: 200
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 221
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1527
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 4.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 152
  bin: 3.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 4111
  bin: 6.75e1
  variant carriers: 3
hgvs: p.Ser3015Arg
num of homozygotes: 1
population: Other
population: East Asian
population: Latino
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
reference allele: C
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum

X-135496330-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24135496330
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24135496330
    reference: chr 0
allele count: 8
allele frequency: 9.442982093745205e-5
allele num: 84719
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000416526
  ensembl transcript: ENST00000412101
  gene symbol: GPR112
  hgvsc: ENST00000412101.1:c.8434C>T
  hgvsp: ENSP00000416526.1:p.Arg2812Trp
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000287534
  ensembl transcript: ENST00000287534
  gene symbol: GPR112
  hgvsc: ENST00000287534.4:c.8206C>T
  hgvsp: ENSP00000287534.4:p.Arg2736Trp
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000377697
  ensembl transcript: ENST00000394141
  gene symbol: GPR112
  hgvsc: ENST00000394141.1:c.8434C>T
  hgvsp: ENSP00000377697.1:p.Arg2812Trp
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000359686
  ensembl transcript: ENST00000370652
  gene symbol: GPR112
  hgvsc: ENST00000370652.1:c.9049C>T
  hgvsp: ENSP00000359686.1:p.Arg3017Trp
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000377699
  ensembl transcript: ENST00000394143
  gene symbol: GPR112
  hgvsc: ENST00000394143.1:c.9049C>T
  hgvsp: ENSP00000377699.1:p.Arg3017Trp
  variant of: http://identifiers.org/hgnc/18992
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1860
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11559
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2856
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
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  bin: 1.25e1
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genotype depth: GenotypeDepth
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  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2593
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6747
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
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  bin: 6.25e1
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genotype depth: GenotypeDepth
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  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1107
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2682
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 481
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1480
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 1981
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3110
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4140
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 4.25e1
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genotype quality: GenotypeQuality
  all individuals: 156
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2484
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2943
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genotype quality: GenotypeQuality
  all individuals: 1538
  bin: 8.75e1
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genotype quality: GenotypeQuality
  all individuals: 46
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 197
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2598
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Arg3017Trp
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: South Asian
population: Other
population: East Asian
reference allele: C
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQ

X-135496331-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24135496331
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24135496331
    reference: chr 0
allele count: 58
allele frequency: 6.830198900102453e-4
allele num: 84917
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000416526
  ensembl transcript: ENST00000412101
  gene symbol: GPR112
  hgvsc: ENST00000412101.1:c.8435G>A
  hgvsp: ENSP00000416526.1:p.Arg2812Gln
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000377699
  ensembl transcript: ENST00000394143
  gene symbol: GPR112
  hgvsc: ENST00000394143.1:c.9050G>A
  hgvsp: ENSP00000377699.1:p.Arg3017Gln
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000359686
  ensembl transcript: ENST00000370652
  gene symbol: GPR112
  hgvsc: ENST00000370652.1:c.9050G>A
  hgvsp: ENSP00000359686.1:p.Arg3017Gln
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000287534
  ensembl transcript: ENST00000287534
  gene symbol: GPR112
  hgvsc: ENST00000287534.4:c.8207G>A
  hgvsp: ENSP00000287534.4:p.Arg2736Gln
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000377697
  ensembl transcript: ENST00000394141
  gene symbol: GPR112
  hgvsc: ENST00000394141.1:c.8435G>A
  hgvsp: ENSP00000377697.1:p.Arg2812Gln
  variant of: http://identifiers.org/hgnc/18992
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5291
  bin: 3.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1861
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2695
  bin: 9.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 573
  bin: 1.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
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  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 1.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 7950
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1113
  bin: 7.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 6750
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
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  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3744
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4304
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2305
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2858
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 633
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
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  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
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  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3297
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 5.25e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 4.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 1540
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1988
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 196
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
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  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 158
  bin: 3.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 3114
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  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 11824
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2505
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Arg3017Gln
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: Other
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
reference allele: G
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: DP

X-135496332-G-GT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24135496332
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24135496333
    reference: chr 0
allele count: 1
allele frequency: 1.176346033949347e-5
allele num: 85009
alternate allele: GT
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000287534
  ensembl transcript: ENST00000287534
  gene symbol: GPR112
  hgvsc: ENST00000287534.4:c.8209dupT
  hgvsp: ENSP00000287534.4:p.Cys2737LeufsTer8
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000359686
  ensembl transcript: ENST00000370652
  gene symbol: GPR112
  hgvsc: ENST00000370652.1:c.9052dupT
  hgvsp: ENSP00000359686.1:p.Cys3018LeufsTer8
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000416526
  ensembl transcript: ENST00000412101
  gene symbol: GPR112
  hgvsc: ENST00000412101.1:c.8437dupT
  hgvsp: ENSP00000416526.1:p.Cys2813LeufsTer8
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000377697
  ensembl transcript: ENST00000394141
  gene symbol: GPR112
  hgvsc: ENST00000394141.1:c.8437dupT
  hgvsp: ENSP00000377697.1:p.Cys2813LeufsTer8
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000377699
  ensembl transcript: ENST00000394143
  gene symbol: GPR112
  hgvsc: ENST00000394143.1:c.9052dupT
  hgvsp: ENSP00000377699.1:p.Cys3018LeufsTer8
  variant of: http://identifiers.org/hgnc/18992
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1107
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5289
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 481
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3746
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1481
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3298
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 847
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2691
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  variant carriers: 1
genotype depth: GenotypeDepth
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  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4174
  bin: 6.75e1
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genotype quality: GenotypeQuality
  all individuals: 48
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 1
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.5e0
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 212
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 5.25e1
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genotype quality: GenotypeQuality
  all individuals: 19
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2454
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 154
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Cys3018LeufsTer8
num of homozygotes: 0
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: European (Finnish)
population: Other
reference allele: G
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: FS

X-135496337-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24135496337
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24135496337
    reference: chr 0
allele count: 1
allele frequency: 1.171316794340197e-5
allele num: 85374
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000359686
  ensembl transcript: ENST00000370652
  gene symbol: GPR112
  hgvsc: ENST00000370652.1:c.9056A>G
  hgvsp: ENSP00000359686.1:p.Gln3019Arg
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000377699
  ensembl transcript: ENST00000394143
  gene symbol: GPR112
  hgvsc: ENST00000394143.1:c.9056A>G
  hgvsp: ENSP00000377699.1:p.Gln3019Arg
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000287534
  ensembl transcript: ENST00000287534
  gene symbol: GPR112
  hgvsc: ENST00000287534.4:c.8213A>G
  hgvsp: ENSP00000287534.4:p.Gln2738Arg
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000416526
  ensembl transcript: ENST00000412101
  gene symbol: GPR112
  hgvsc: ENST00000412101.1:c.8441A>G
  hgvsp: ENSP00000416526.1:p.Gln2814Arg
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000377697
  ensembl transcript: ENST00000394141
  gene symbol: GPR112
  hgvsc: ENST00000394141.1:c.8441A>G
  hgvsp: ENSP00000377697.1:p.Gln2814Arg
  variant of: http://identifiers.org/hgnc/18992
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2860
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12041
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2143
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6771
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1859
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2305
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 543
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4310
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 847
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5290
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8024
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3746
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2691
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 632
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1481
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3299
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1107
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 481
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2163
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1547
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2956
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29106
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 145
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3133
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4200
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12183
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Gln3019Arg
num of homozygotes: 0
population: Other
population: Latino
population: African
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: East Asian
reference allele: A
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: ReadPosRankSum

X-135496344-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24135496344
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24135496344
    reference: chr 0
allele count: 55
allele frequency: 6.409135931946629e-4
allele num: 85815
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000377697
  ensembl transcript: ENST00000394141
  gene symbol: GPR112
  hgvsc: ENST00000394141.1:c.8448G>A
  hgvsp: ENST00000394141.1:c.8448G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000359686
  ensembl transcript: ENST00000370652
  gene symbol: GPR112
  hgvsc: ENST00000370652.1:c.9063G>A
  hgvsp: ENST00000370652.1:c.9063G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000287534
  ensembl transcript: ENST00000287534
  gene symbol: GPR112
  hgvsc: ENST00000287534.4:c.8220G>A
  hgvsp: ENST00000287534.4:c.8220G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000377699
  ensembl transcript: ENST00000394143
  gene symbol: GPR112
  hgvsc: ENST00000394143.1:c.9063G>A
  hgvsp: ENST00000394143.1:c.9063G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000416526
  ensembl transcript: ENST00000412101
  gene symbol: GPR112
  hgvsc: ENST00000412101.1:c.8448G>A
  hgvsp: ENST00000412101.1:c.8448G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18992
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2710
  bin: 9.75e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 6786
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2860
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 1.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1768
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4309
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2305
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1481
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3743
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3298
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
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  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 4
genotype depth: GenotypeDepth
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  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
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  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 12381
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  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1864
  bin: 6.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1108
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 482
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  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5292
  bin: 3.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
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  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 201
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  variant carriers: 3
genotype quality: GenotypeQuality
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  bin: 3.75e1
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genotype quality: GenotypeQuality
  all individuals: 2493
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  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1551
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 6.25e1
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genotype quality: GenotypeQuality
  all individuals: 2001
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3139
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 5.25e1
  variant carriers: 1
hgvs: p.Lys3021Lys
num of homozygotes: 0
population: South Asian
population: Latino
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Other
reference allele: G
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum

X-135496346-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24135496346
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24135496346
    reference: chr 0
allele count: 1
allele frequency: 1.163480668768688e-5
allele num: 85949
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000377699
  ensembl transcript: ENST00000394143
  gene symbol: GPR112
  hgvsc: ENST00000394143.1:c.9065T>A
  hgvsp: ENSP00000377699.1:p.Val3022Asp
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000359686
  ensembl transcript: ENST00000370652
  gene symbol: GPR112
  hgvsc: ENST00000370652.1:c.9065T>A
  hgvsp: ENSP00000359686.1:p.Val3022Asp
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000377697
  ensembl transcript: ENST00000394141
  gene symbol: GPR112
  hgvsc: ENST00000394141.1:c.8450T>A
  hgvsp: ENSP00000377697.1:p.Val2817Asp
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000416526
  ensembl transcript: ENST00000412101
  gene symbol: GPR112
  hgvsc: ENST00000412101.1:c.8450T>A
  hgvsp: ENSP00000416526.1:p.Val2817Asp
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000287534
  ensembl transcript: ENST00000287534
  gene symbol: GPR112
  hgvsc: ENST00000287534.4:c.8222T>A
  hgvsp: ENSP00000287534.4:p.Val2741Asp
  variant of: http://identifiers.org/hgnc/18992
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4312
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1670
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1482
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5294
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 632
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3297
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8105
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12477
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1108
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1863
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3742
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2859
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
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  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 484
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
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  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2495
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1689
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 162
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genotype quality: GenotypeQuality
  all individuals: 199
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genotype quality: GenotypeQuality
  all individuals: 2008
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4227
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Val3022Asp
num of homozygotes: 0
population: African
population: East Asian
population: South Asian
population: Latino
population: Other
population: European (Finnish)
population: European (Non-Finnish)
reference allele: T
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: DP

X-135496353-TAAACA-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24135496353
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24135496348
    reference: chr 0
allele count: 1
allele frequency: 1.159111193536796e-5
allele num: 86273
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000377697
  ensembl transcript: ENST00000394141
  gene symbol: GPR112
  hgvsc: ENST00000394141.1:c.8458_8462delAAACA
  hgvsp: ENSP00000377697.1:p.Lys2820GlyfsTer8
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000359686
  ensembl transcript: ENST00000370652
  gene symbol: GPR112
  hgvsc: ENST00000370652.1:c.9073_9077delAAACA
  hgvsp: ENSP00000359686.1:p.Lys3025GlyfsTer8
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000416526
  ensembl transcript: ENST00000412101
  gene symbol: GPR112
  hgvsc: ENST00000412101.1:c.8458_8462delAAACA
  hgvsp: ENSP00000416526.1:p.Lys2820GlyfsTer8
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000287534
  ensembl transcript: ENST00000287534
  gene symbol: GPR112
  hgvsc: ENST00000287534.4:c.8230_8234delAAACA
  hgvsp: ENSP00000287534.4:p.Lys2744GlyfsTer8
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000377699
  ensembl transcript: ENST00000394143
  gene symbol: GPR112
  hgvsc: ENST00000394143.1:c.9073_9077delAAACA
  hgvsp: ENSP00000377699.1:p.Lys3025GlyfsTer8
  variant of: http://identifiers.org/hgnc/18992
canonical: true
consequence: frameshift
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 2305
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2710
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 419
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3743
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8171
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1380
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1108
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2859
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 632
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4316
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6817
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1482
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3298
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1862
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3159
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2495
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 126
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1415
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 175
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4264
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Lys3025GlyfsTer8
num of homozygotes: 0
population: Latino
population: African
population: South Asian
population: European (Finnish)
population: Other
population: East Asian
population: European (Non-Finnish)
reference allele: TAAACA
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum

X-135496355-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24135496355
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24135496355
    reference: chr 0
allele count: 1
allele frequency: 1.157849641645536e-5
allele num: 86367
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000416526
  ensembl transcript: ENST00000412101
  gene symbol: GPR112
  hgvsc: ENST00000412101.1:c.8459A>C
  hgvsp: ENSP00000416526.1:p.Lys2820Thr
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000359686
  ensembl transcript: ENST00000370652
  gene symbol: GPR112
  hgvsc: ENST00000370652.1:c.9074A>C
  hgvsp: ENSP00000359686.1:p.Lys3025Thr
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000377699
  ensembl transcript: ENST00000394143
  gene symbol: GPR112
  hgvsc: ENST00000394143.1:c.9074A>C
  hgvsp: ENSP00000377699.1:p.Lys3025Thr
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000287534
  ensembl transcript: ENST00000287534
  gene symbol: GPR112
  hgvsc: ENST00000287534.4:c.8231A>C
  hgvsp: ENSP00000287534.4:p.Lys2744Thr
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000377697
  ensembl transcript: ENST00000394141
  gene symbol: GPR112
  hgvsc: ENST00000394141.1:c.8459A>C
  hgvsp: ENSP00000377697.1:p.Lys2820Thr
  variant of: http://identifiers.org/hgnc/18992
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1289
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2859
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1108
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 851
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1482
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1862
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2709
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6819
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8188
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5298
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4316
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2305
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12890
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 632
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3299
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3743
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3162
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 122
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1319
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 164
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13054
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2017
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2495
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Lys3025Thr
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
population: Other
population: South Asian
population: European (Finnish)
reference allele: A
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum

X-135496359-GGAGGGACTAAAGAAAATCTTTGAGCACAAACTGTTGACGCCATCTCTCAAGTCAACTGCAACTAGCTCCACTTTCAAATCTTTAGGCTC-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24135496359
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24135496270
    reference: chr 0
allele count: 1
allele frequency: 1.155187949079315e-5
allele num: 86566
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000287534
  ensembl transcript: ENST00000287534
  gene symbol: GPR112
  hgvsp: ENSP00000287534.4:p.Glu2746CysfsTer?
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000416526
  ensembl transcript: ENST00000412101
  gene symbol: GPR112
  hgvsp: ENSP00000416526.1:p.Glu2822CysfsTer13
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000359686
  ensembl transcript: ENST00000370652
  gene symbol: GPR112
  hgvsp: ENSP00000359686.1:p.Glu3027CysfsTer13
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000377697
  ensembl transcript: ENST00000394141
  gene symbol: GPR112
  hgvsp: ENSP00000377697.1:p.Glu2822CysfsTer13
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000377699
  ensembl transcript: ENST00000394143
  gene symbol: GPR112
  hgvsp: ENSP00000377699.1:p.Glu3027CysfsTer13
  variant of: http://identifiers.org/hgnc/18992
canonical: true
consequence: frameshift
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 632
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1117
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8263
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5301
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2859
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13038
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6836
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3299
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2709
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1108
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2305
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1483
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 851
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3743
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4316
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1862
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 144
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4315
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29138
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1563
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2497
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1158
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Glu3027CysfsTer13
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: South Asian
population: Other
population: European (Non-Finnish)
population: Latino
reference allele: GGAGGGACTAAAGAAAATCTTTGAGCACAAACTGTTGACGCCATCTCTCAAGTCAACTGCAACTAGCTCCACTTTCAAATCTTTAGGCTC
site quality: MQ
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD

X-135496364-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24135496364
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24135496364
    reference: chr 0
allele count: 3
allele frequency: 3.45701774602443e-5
allele num: 86780
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000359686
  ensembl transcript: ENST00000370652
  gene symbol: GPR112
  hgvsc: ENST00000370652.1:c.9083G>A
  hgvsp: ENSP00000359686.1:p.Gly3028Glu
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000287534
  ensembl transcript: ENST00000287534
  gene symbol: GPR112
  hgvsc: ENST00000287534.4:c.8240G>A
  hgvsp: ENSP00000287534.4:p.Gly2747Glu
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000377699
  ensembl transcript: ENST00000394143
  gene symbol: GPR112
  hgvsc: ENST00000394143.1:c.9083G>A
  hgvsp: ENSP00000377699.1:p.Gly3028Glu
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000377697
  ensembl transcript: ENST00000394141
  gene symbol: GPR112
  hgvsc: ENST00000394141.1:c.8468G>A
  hgvsp: ENSP00000377697.1:p.Gly2823Glu
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000416526
  ensembl transcript: ENST00000412101
  gene symbol: GPR112
  hgvsc: ENST00000412101.1:c.8468G>A
  hgvsp: ENSP00000416526.1:p.Gly2823Glu
  variant of: http://identifiers.org/hgnc/18992
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8333
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6855
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3742
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2860
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2712
  bin: 9.75e1
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genotype depth: GenotypeDepth
  all individuals: 4316
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 916
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1862
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 632
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5302
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2305
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3298
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 851
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1482
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1108
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 484
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 128
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 956
  bin: 2.25e1
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genotype quality: GenotypeQuality
  all individuals: 50
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13430
  bin: 6.25e1
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genotype quality: GenotypeQuality
  all individuals: 2502
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genotype quality: GenotypeQuality
  all individuals: 4339
  bin: 6.75e1
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genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3181
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Gly3028Glu
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: Latino
population: South Asian
population: East Asian
population: European (Finnish)
population: African
reference allele: G
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: ClippingRankSum

X-135496371-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24135496371
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24135496371
    reference: chr 0
allele count: 1
allele frequency: 1.148435256962389e-5
allele num: 87075
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000416526
  ensembl transcript: ENST00000412101
  gene symbol: GPR112
  hgvsc: ENST00000412101.1:c.8475G>A
  hgvsp: ENST00000412101.1:c.8475G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000377697
  ensembl transcript: ENST00000394141
  gene symbol: GPR112
  hgvsc: ENST00000394141.1:c.8475G>A
  hgvsp: ENST00000394141.1:c.8475G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000359686
  ensembl transcript: ENST00000370652
  gene symbol: GPR112
  hgvsc: ENST00000370652.1:c.9090G>A
  hgvsp: ENST00000370652.1:c.9090G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000377699
  ensembl transcript: ENST00000394143
  gene symbol: GPR112
  hgvsc: ENST00000394143.1:c.9090G>A
  hgvsp: ENST00000394143.1:c.9090G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000287534
  ensembl transcript: ENST00000287534
  gene symbol: GPR112
  hgvsc: ENST00000287534.4:c.8247G>A
  hgvsp: ENST00000287534.4:c.8247G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18992
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8433
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1863
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3298
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6880
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2711
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 646
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1109
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
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  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 851
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2305
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5305
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4316
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13461
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.25e1
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 9.75e1
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genotype quality: GenotypeQuality
  all individuals: 93
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1566
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Lys3030Lys
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: G
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum

X-135496377-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24135496377
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24135496377
    reference: chr 0
allele count: 1
allele frequency: 1.146144941489301e-5
allele num: 87249
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000287534
  ensembl transcript: ENST00000287534
  gene symbol: GPR112
  hgvsc: ENST00000287534.4:c.8253C>T
  hgvsp: ENST00000287534.4:c.8253C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000359686
  ensembl transcript: ENST00000370652
  gene symbol: GPR112
  hgvsc: ENST00000370652.1:c.9096C>T
  hgvsp: ENST00000370652.1:c.9096C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000416526
  ensembl transcript: ENST00000412101
  gene symbol: GPR112
  hgvsc: ENST00000412101.1:c.8481C>T
  hgvsp: ENST00000412101.1:c.8481C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000377697
  ensembl transcript: ENST00000394141
  gene symbol: GPR112
  hgvsc: ENST00000394141.1:c.8481C>T
  hgvsp: ENST00000394141.1:c.8481C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000377699
  ensembl transcript: ENST00000394143
  gene symbol: GPR112
  hgvsc: ENST00000394143.1:c.9096C>T
  hgvsp: ENST00000394143.1:c.9096C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18992
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2712
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3742
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1108
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1862
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4316
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6891
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2859
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 485
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3299
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13648
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8482
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 632
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genotype depth: GenotypeDepth
  all individuals: 852
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1482
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2306
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5305
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2069
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4405
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2989
  bin: 8.25e1
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genotype quality: GenotypeQuality
  all individuals: 63
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 513
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Ile3032Ile
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: Other
population: African
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: FS

X-135496392-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24135496392
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24135496392
    reference: chr 0
allele count: 8
allele frequency: 9.141081161374361e-5
allele num: 87517
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000359686
  ensembl transcript: ENST00000370652
  gene symbol: GPR112
  hgvsc: ENST00000370652.1:c.9111G>A
  hgvsp: ENST00000370652.1:c.9111G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000416526
  ensembl transcript: ENST00000412101
  gene symbol: GPR112
  hgvsc: ENST00000412101.1:c.8496G>A
  hgvsp: ENST00000412101.1:c.8496G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000377697
  ensembl transcript: ENST00000394141
  gene symbol: GPR112
  hgvsc: ENST00000394141.1:c.8496G>A
  hgvsp: ENST00000394141.1:c.8496G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000377699
  ensembl transcript: ENST00000394143
  gene symbol: GPR112
  hgvsc: ENST00000394143.1:c.9111G>A
  hgvsp: ENST00000394143.1:c.9111G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000287534
  ensembl transcript: ENST00000287534
  gene symbol: GPR112
  hgvsc: ENST00000287534.4:c.8268G>A
  hgvsp: ENST00000287534.4:c.8268G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18992
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4317
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2719
  bin: 9.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6928
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8585
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13871
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2305
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5310
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1108
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 632
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1861
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3297
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3743
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2858
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 852
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14230
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4469
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2088
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3010
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 3.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 17
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Leu3037Leu
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: African
population: Other
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum

X-135496398-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24135496398
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24135496398
    reference: chr 0
allele count: 58722
allele frequency: 6.695628377916125e-1
allele num: 87702
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000377699
  ensembl transcript: ENST00000394143
  gene symbol: GPR112
  hgvsc: ENST00000394143.1:c.9117G>A
  hgvsp: ENST00000394143.1:c.9117G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000377697
  ensembl transcript: ENST00000394141
  gene symbol: GPR112
  hgvsc: ENST00000394141.1:c.8502G>A
  hgvsp: ENST00000394141.1:c.8502G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000416526
  ensembl transcript: ENST00000412101
  gene symbol: GPR112
  hgvsc: ENST00000412101.1:c.8502G>A
  hgvsp: ENST00000412101.1:c.8502G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000287534
  ensembl transcript: ENST00000287534
  gene symbol: GPR112
  hgvsc: ENST00000287534.4:c.8274G>A
  hgvsp: ENST00000287534.4:c.8274G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000359686
  ensembl transcript: ENST00000370652
  gene symbol: GPR112
  hgvsc: ENST00000370652.1:c.9117G>A
  hgvsp: ENST00000370652.1:c.9117G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18992
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4519
  bin: 2.25e1
  variant carriers: 343
genotype depth: GenotypeDepth
  all individuals: 1159
  bin: 7.75e1
  variant carriers: 981
genotype depth: GenotypeDepth
  all individuals: 1221
  bin: 8.25e1
  variant carriers: 1099
genotype depth: GenotypeDepth
  all individuals: 3356
  bin: 2.75e1
  variant carriers: 552
genotype depth: GenotypeDepth
  all individuals: 1002
  bin: 6.75e1
  variant carriers: 705
genotype depth: GenotypeDepth
  all individuals: 1456
  bin: 9.25e1
  variant carriers: 1383
genotype depth: GenotypeDepth
  all individuals: 1315
  bin: 8.75e1
  variant carriers: 1210
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 1.25e1
  variant carriers: 49
genotype depth: GenotypeDepth
  all individuals: 1123
  bin: 4.75e1
  variant carriers: 427
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.5e0
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 891
  bin: 5.75e1
  variant carriers: 473
genotype depth: GenotypeDepth
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  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
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  bin: 3.25e1
  variant carriers: 593
genotype depth: GenotypeDepth
  all individuals: 1973
  bin: 3.75e1
  variant carriers: 561
genotype depth: GenotypeDepth
  all individuals: 35507
  bin: 9.75e1
  variant carriers: 35146
genotype depth: GenotypeDepth
  all individuals: 886
  bin: 5.25e1
  variant carriers: 402
genotype depth: GenotypeDepth
  all individuals: 906
  bin: 6.25e1
  variant carriers: 565
genotype depth: GenotypeDepth
  all individuals: 1088
  bin: 7.25e1
  variant carriers: 855
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 1.75e1
  variant carriers: 171
genotype depth: GenotypeDepth
  all individuals: 1387
  bin: 4.25e1
  variant carriers: 431
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 3.75e1
  variant carriers: 26
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 2.5e0
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5104
  bin: 6.25e1
  variant carriers: 103
genotype quality: GenotypeQuality
  all individuals: 1093
  bin: 8.25e1
  variant carriers: 221
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 5.75e1
  variant carriers: 57
genotype quality: GenotypeQuality
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  bin: 1.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 4.75e1
  variant carriers: 47
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 49249
  bin: 9.75e1
  variant carriers: 44555
genotype quality: GenotypeQuality
  all individuals: 24
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genotype quality: GenotypeQuality
  all individuals: 22
  bin: 3.25e1
  variant carriers: 15
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 5.25e1
  variant carriers: 83
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.75e1
  variant carriers: 11
hgvs: p.Thr3039Thr
num of homozygotes: 12783
population: African
population: South Asian
population: European (Finnish)
population: Other
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: MQ

X-135496420-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24135496420
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24135496420
    reference: chr 0
allele count: 2
allele frequency: 2.281204019481482e-5
allele num: 87673
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000377699
  ensembl transcript: ENST00000394143
  gene symbol: GPR112
  hgvsc: ENST00000394143.1:c.9139A>G
  hgvsp: ENSP00000377699.1:p.Thr3047Ala
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000377697
  ensembl transcript: ENST00000394141
  gene symbol: GPR112
  hgvsc: ENST00000394141.1:c.8524A>G
  hgvsp: ENSP00000377697.1:p.Thr2842Ala
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000416526
  ensembl transcript: ENST00000412101
  gene symbol: GPR112
  hgvsc: ENST00000412101.1:c.8524A>G
  hgvsp: ENSP00000416526.1:p.Thr2842Ala
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000359686
  ensembl transcript: ENST00000370652
  gene symbol: GPR112
  hgvsc: ENST00000370652.1:c.9139A>G
  hgvsp: ENSP00000359686.1:p.Thr3047Ala
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000287534
  ensembl transcript: ENST00000287534
  gene symbol: GPR112
  hgvsc: ENST00000287534.4:c.8296A>G
  hgvsp: ENSP00000287534.4:p.Thr2766Ala
  variant of: http://identifiers.org/hgnc/18992
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1938
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2976
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1656
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2359
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1249
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8462
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4482
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2517
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5576
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2678
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7396
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2423
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5178
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2153
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 6.75e1
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genotype quality: GenotypeQuality
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  bin: 2.75e1
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genotype quality: GenotypeQuality
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  bin: 1.75e1
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genotype quality: GenotypeQuality
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  bin: 9.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 27
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 180
  bin: 2.25e1
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genotype quality: GenotypeQuality
  all individuals: 3079
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2835
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Thr3047Ala
num of homozygotes: 0
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: East Asian
population: Latino
population: South Asian
reference allele: A
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD

X-135496421-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24135496421
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24135496421
    reference: chr 0
allele count: 1
allele frequency: 1.140602009740741e-5
allele num: 87673
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000359686
  ensembl transcript: ENST00000370652
  gene symbol: GPR112
  hgvsc: ENST00000370652.1:c.9140C>A
  hgvsp: ENSP00000359686.1:p.Thr3047Asn
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000287534
  ensembl transcript: ENST00000287534
  gene symbol: GPR112
  hgvsc: ENST00000287534.4:c.8297C>A
  hgvsp: ENSP00000287534.4:p.Thr2766Asn
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000377699
  ensembl transcript: ENST00000394143
  gene symbol: GPR112
  hgvsc: ENST00000394143.1:c.9140C>A
  hgvsp: ENSP00000377699.1:p.Thr3047Asn
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000416526
  ensembl transcript: ENST00000412101
  gene symbol: GPR112
  hgvsc: ENST00000412101.1:c.8525C>A
  hgvsp: ENSP00000416526.1:p.Thr2842Asn
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000377697
  ensembl transcript: ENST00000394141
  gene symbol: GPR112
  hgvsc: ENST00000394141.1:c.8525C>A
  hgvsp: ENSP00000377697.1:p.Thr2842Asn
  variant of: http://identifiers.org/hgnc/18992
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2152
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 0
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genotype quality: GenotypeQuality
  all individuals: 3076
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Thr3047Asn
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Latino
population: African
population: East Asian
population: Other
reference allele: C
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD

X-135496439-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24135496439
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24135496439
    reference: chr 0
allele count: 1
allele frequency: 1.142556813637558e-5
allele num: 87523
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000416526
  ensembl transcript: ENST00000412101
  gene symbol: GPR112
  hgvsc: ENST00000412101.1:c.8543C>T
  hgvsp: ENSP00000416526.1:p.Ser2848Phe
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000377697
  ensembl transcript: ENST00000394141
  gene symbol: GPR112
  hgvsc: ENST00000394141.1:c.8543C>T
  hgvsp: ENSP00000377697.1:p.Ser2848Phe
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000377699
  ensembl transcript: ENST00000394143
  gene symbol: GPR112
  hgvsc: ENST00000394143.1:c.9158C>T
  hgvsp: ENSP00000377699.1:p.Ser3053Phe
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000287534
  ensembl transcript: ENST00000287534
  gene symbol: GPR112
  hgvsc: ENST00000287534.4:c.8315C>T
  hgvsp: ENSP00000287534.4:p.Ser2772Phe
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000359686
  ensembl transcript: ENST00000370652
  gene symbol: GPR112
  hgvsc: ENST00000370652.1:c.9158C>T
  hgvsp: ENSP00000359686.1:p.Ser3053Phe
  variant of: http://identifiers.org/hgnc/18992
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4483
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 56
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  variant carriers: 0
hgvs: p.Ser3053Phe
num of homozygotes: 0
population: Other
population: African
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD

X-135496446-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24135496446
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24135496446
    reference: chr 0
allele count: 5
allele frequency: 5.719318714754698e-5
allele num: 87423
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000416526
  ensembl transcript: ENST00000412101
  gene symbol: GPR112
  hgvsc: ENST00000412101.1:c.8550C>T
  hgvsp: ENST00000412101.1:c.8550C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000287534
  ensembl transcript: ENST00000287534
  gene symbol: GPR112
  hgvsc: ENST00000287534.4:c.8322C>T
  hgvsp: ENST00000287534.4:c.8322C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000377699
  ensembl transcript: ENST00000394143
  gene symbol: GPR112
  hgvsc: ENST00000394143.1:c.9165C>T
  hgvsp: ENST00000394143.1:c.9165C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000359686
  ensembl transcript: ENST00000370652
  gene symbol: GPR112
  hgvsc: ENST00000370652.1:c.9165C>T
  hgvsp: ENST00000370652.1:c.9165C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000377697
  ensembl transcript: ENST00000394141
  gene symbol: GPR112
  hgvsc: ENST00000394141.1:c.8550C>T
  hgvsp: ENST00000394141.1:c.8550C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18992
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2677
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2516
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 11381
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Gly3055Gly
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Other
population: African
population: Latino
population: South Asian
population: European (Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: ClippingRankSum

X-135496454-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24135496454
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24135496454
    reference: chr 0
allele count: 4
allele frequency: 4.588155676122091e-5
allele num: 87181
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000359686
  ensembl transcript: ENST00000370652
  gene symbol: GPR112
  hgvsc: ENST00000370652.1:c.9173A>T
  hgvsp: ENSP00000359686.1:p.Gln3058Leu
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000287534
  ensembl transcript: ENST00000287534
  gene symbol: GPR112
  hgvsc: ENST00000287534.4:c.8330A>T
  hgvsp: ENSP00000287534.4:p.Gln2777Leu
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000377699
  ensembl transcript: ENST00000394143
  gene symbol: GPR112
  hgvsc: ENST00000394143.1:c.9173A>T
  hgvsp: ENSP00000377699.1:p.Gln3058Leu
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000377697
  ensembl transcript: ENST00000394141
  gene symbol: GPR112
  hgvsc: ENST00000394141.1:c.8558A>T
  hgvsp: ENSP00000377697.1:p.Gln2853Leu
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000416526
  ensembl transcript: ENST00000412101
  gene symbol: GPR112
  hgvsc: ENST00000412101.1:c.8558A>T
  hgvsp: ENSP00000416526.1:p.Gln2853Leu
  variant of: http://identifiers.org/hgnc/18992
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2154
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
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  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 1941
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 549
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1252
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3691
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2968
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2365
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5209
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4481
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2673
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1658
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2521
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2811
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1761
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3016
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1001
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11073
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2453
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Gln3058Leu
num of homozygotes: 0
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Other
population: Latino
population: South Asian
reference allele: A
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS

X-135496457-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24135496457
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24135496457
    reference: chr 0
allele count: 761
allele frequency: 8.740596106357319e-3
allele num: 87065
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000287534
  ensembl transcript: ENST00000287534
  gene symbol: GPR112
  hgvsc: ENST00000287534.4:c.8333G>A
  hgvsp: ENSP00000287534.4:p.Gly2778Asp
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000416526
  ensembl transcript: ENST00000412101
  gene symbol: GPR112
  hgvsc: ENST00000412101.1:c.8561G>A
  hgvsp: ENSP00000416526.1:p.Gly2854Asp
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000377699
  ensembl transcript: ENST00000394143
  gene symbol: GPR112
  hgvsc: ENST00000394143.1:c.9176G>A
  hgvsp: ENSP00000377699.1:p.Gly3059Asp
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000377697
  ensembl transcript: ENST00000394141
  gene symbol: GPR112
  hgvsc: ENST00000394141.1:c.8561G>A
  hgvsp: ENSP00000377697.1:p.Gly2854Asp
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000359686
  ensembl transcript: ENST00000370652
  gene symbol: GPR112
  hgvsc: ENST00000370652.1:c.9176G>A
  hgvsp: ENSP00000359686.1:p.Gly3059Asp
  variant of: http://identifiers.org/hgnc/18992
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2514
  bin: 6.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 2425
  bin: 6.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 7207
  bin: 3.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 1250
  bin: 9.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 4480
  bin: 4.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 638
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5128
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2363
  bin: 7.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7937
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3686
  bin: 4.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 1657
  bin: 8.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 5547
  bin: 3.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 2154
  bin: 7.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 728
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2672
  bin: 5.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 2969
  bin: 5.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 5197
  bin: 9.75e1
  variant carriers: 607
genotype depth: GenotypeDepth
  all individuals: 1947
  bin: 8.25e1
  variant carriers: 21
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 5.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1458
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4037
  bin: 6.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 131
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 7.5e0
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genotype quality: GenotypeQuality
  all individuals: 3013
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1179
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genotype quality: GenotypeQuality
  all individuals: 1753
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10841
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Gly3059Asp
num of homozygotes: 20
population: South Asian
population: African
population: Latino
population: Other
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff

X-135496458-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24135496458
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24135496458
    reference: chr 0
allele count: 1
allele frequency: 1.149293184691415e-5
allele num: 87010
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000416526
  ensembl transcript: ENST00000412101
  gene symbol: GPR112
  hgvsc: ENST00000412101.1:c.8562C>T
  hgvsp: ENST00000412101.1:c.8562C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000359686
  ensembl transcript: ENST00000370652
  gene symbol: GPR112
  hgvsc: ENST00000370652.1:c.9177C>T
  hgvsp: ENST00000370652.1:c.9177C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000287534
  ensembl transcript: ENST00000287534
  gene symbol: GPR112
  hgvsc: ENST00000287534.4:c.8334C>T
  hgvsp: ENST00000287534.4:c.8334C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000377697
  ensembl transcript: ENST00000394141
  gene symbol: GPR112
  hgvsc: ENST00000394141.1:c.8562C>T
  hgvsp: ENST00000394141.1:c.8562C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000377699
  ensembl transcript: ENST00000394143
  gene symbol: GPR112
  hgvsc: ENST00000394143.1:c.9177C>T
  hgvsp: ENST00000394143.1:c.9177C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/18992
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3720
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7942
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2401
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 775
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2703
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5110
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7237
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1961
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 682
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4513
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5581
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2186
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4690
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2572
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1693
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1270
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3001
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2449
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32463
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2823
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 141
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10795
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 131
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4049
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2469
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Gly3059Gly
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: South Asian
population: African
population: Other
population: Latino
reference allele: C
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: DP

X-135496467-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24135496467
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24135496467
    reference: chr 0
allele count: 2
allele frequency: 2.307869836141242e-5
allele num: 86660
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000377697
  ensembl transcript: ENST00000394141
  gene symbol: GPR112
  hgvsc: ENST00000394141.1:c.8571A>G
  hgvsp: ENST00000394141.1:c.8571A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000359686
  ensembl transcript: ENST00000370652
  gene symbol: GPR112
  hgvsc: ENST00000370652.1:c.9186A>G
  hgvsp: ENST00000370652.1:c.9186A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000416526
  ensembl transcript: ENST00000412101
  gene symbol: GPR112
  hgvsc: ENST00000412101.1:c.8571A>G
  hgvsp: ENST00000412101.1:c.8571A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000287534
  ensembl transcript: ENST00000287534
  gene symbol: GPR112
  hgvsc: ENST00000287534.4:c.8343A>G
  hgvsp: ENST00000287534.4:c.8343A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000377699
  ensembl transcript: ENST00000394143
  gene symbol: GPR112
  hgvsc: ENST00000394143.1:c.9186A>G
  hgvsp: ENST00000394143.1:c.9186A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18992
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1693
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2572
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1008
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4849
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1961
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7125
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2401
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1105
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5565
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4510
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2186
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3000
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3718
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1270
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4690
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7605
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2703
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2448
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 162
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3966
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10213
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
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genotype quality: GenotypeQuality
  all individuals: 3009
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 5.25e1
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genotype quality: GenotypeQuality
  all individuals: 32461
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1867
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 169
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Ser3062Ser
num of homozygotes: 0
population: African
population: Latino
population: South Asian
population: East Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: A
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: DP

X-135496491-G-GA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24135496491
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24135496492
    reference: chr 0
allele count: 1
allele frequency: 1.170809380524757e-5
allele num: 85411
alternate allele: GA
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000377699
  ensembl transcript: ENST00000394143
  gene symbol: GPR112
  hgvsc: ENST00000394143.1:c.9205+12dupA
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000359686
  ensembl transcript: ENST00000370652
  gene symbol: GPR112
  hgvsc: ENST00000370652.1:c.9205+12dupA
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000377697
  ensembl transcript: ENST00000394141
  gene symbol: GPR112
  hgvsc: ENST00000394141.1:c.8590+12dupA
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000287534
  ensembl transcript: ENST00000287534
  gene symbol: GPR112
  hgvsc: ENST00000287534.4:c.8362+12dupA
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000416526
  ensembl transcript: ENST00000412101
  gene symbol: GPR112
  hgvsc: ENST00000412101.1:c.8590+12dupA
  variant of: http://identifiers.org/hgnc/18992
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 8767
  bin: 6.25e1
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genotype quality: GenotypeQuality
  all individuals: 279
  bin: 2.75e1
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genotype quality: GenotypeQuality
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  bin: 3.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 238
  bin: 3.25e1
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genotype quality: GenotypeQuality
  all individuals: 2930
  bin: 2.25e1
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genotype quality: GenotypeQuality
  all individuals: 303
  bin: 7.5e0
  variant carriers: 0
hgvs: c.9205+12dupA
num of homozygotes: 0
population: Other
population: South Asian
population: European (Finnish)
population: Latino
population: African
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: DP
site quality: QD
site quality: InbreedingCoeff

X-135496493-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24135496493
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24135496493
    reference: chr 0
allele count: 1
allele frequency: 1.171193328882799e-5
allele num: 85383
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000359686
  ensembl transcript: ENST00000370652
  gene symbol: GPR112
  hgvsc: ENST00000370652.1:c.9205+7A>G
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000416526
  ensembl transcript: ENST00000412101
  gene symbol: GPR112
  hgvsc: ENST00000412101.1:c.8590+7A>G
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000287534
  ensembl transcript: ENST00000287534
  gene symbol: GPR112
  hgvsc: ENST00000287534.4:c.8362+7A>G
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000377697
  ensembl transcript: ENST00000394141
  gene symbol: GPR112
  hgvsc: ENST00000394141.1:c.8590+7A>G
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000377699
  ensembl transcript: ENST00000394143
  gene symbol: GPR112
  hgvsc: ENST00000394143.1:c.9205+7A>G
  variant of: http://identifiers.org/hgnc/18992
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4688
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2705
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6789
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 9.25e1
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genotype depth: GenotypeDepth
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  bin: 6.75e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 1693
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6918
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 1836
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 5.75e1
  variant carriers: 0
hgvs: c.9205+7A>G
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Latino
population: African
population: European (Finnish)
population: Other
population: South Asian
reference allele: A
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: DP
site quality: InbreedingCoeff

X-135496503-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24135496503
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24135496503
    reference: chr 0
allele count: 2
allele frequency: 2.358880003774208e-5
allele num: 84786
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000377699
  ensembl transcript: ENST00000394143
  gene symbol: GPR112
  hgvsc: ENST00000394143.1:c.9205+17G>C
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000287534
  ensembl transcript: ENST00000287534
  gene symbol: GPR112
  hgvsc: ENST00000287534.4:c.8362+17G>C
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000359686
  ensembl transcript: ENST00000370652
  gene symbol: GPR112
  hgvsc: ENST00000370652.1:c.9205+17G>C
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000416526
  ensembl transcript: ENST00000412101
  gene symbol: GPR112
  hgvsc: ENST00000412101.1:c.8590+17G>C
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000377697
  ensembl transcript: ENST00000394141
  gene symbol: GPR112
  hgvsc: ENST00000394141.1:c.8590+17G>C
  variant of: http://identifiers.org/hgnc/18992
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 2573
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2185
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1995
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3780
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 32447
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: European (Finnish)
population: Latino
population: African
population: Other
reference allele: G
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: DP

X-135496506-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24135496506
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24135496506
    reference: chr 0
allele count: 2
allele frequency: 2.365128544736406e-5
allele num: 84562
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000359686
  ensembl transcript: ENST00000370652
  gene symbol: GPR112
  hgvsc: ENST00000370652.1:c.9205+20T>C
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000287534
  ensembl transcript: ENST00000287534
  gene symbol: GPR112
  hgvsc: ENST00000287534.4:c.8362+20T>C
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000377699
  ensembl transcript: ENST00000394143
  gene symbol: GPR112
  hgvsc: ENST00000394143.1:c.9205+20T>C
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000416526
  ensembl transcript: ENST00000412101
  gene symbol: GPR112
  hgvsc: ENST00000412101.1:c.8590+20T>C
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000377697
  ensembl transcript: ENST00000394141
  gene symbol: GPR112
  hgvsc: ENST00000394141.1:c.8590+20T>C
  variant of: http://identifiers.org/hgnc/18992
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3678
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6772
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2572
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5531
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1960
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.75e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 2447
  bin: 6.25e1
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 2928
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: South Asian
reference allele: T
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: QD

X-135496525-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24135496525
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24135496525
    reference: chr 0
allele count: 2
allele frequency: 2.390028799847038e-5
allele num: 83681
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000377699
  ensembl transcript: ENST00000394143
  gene symbol: GPR112
  hgvsc: ENST00000394143.1:c.9205+39A>G
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000377697
  ensembl transcript: ENST00000394141
  gene symbol: GPR112
  hgvsc: ENST00000394141.1:c.8590+39A>G
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000359686
  ensembl transcript: ENST00000370652
  gene symbol: GPR112
  hgvsc: ENST00000370652.1:c.9205+39A>G
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000287534
  ensembl transcript: ENST00000287534
  gene symbol: GPR112
  hgvsc: ENST00000287534.4:c.8362+39A>G
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000416526
  ensembl transcript: ENST00000412101
  gene symbol: GPR112
  hgvsc: ENST00000412101.1:c.8590+39A>G
  variant of: http://identifiers.org/hgnc/18992
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2447
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1284
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  variant carriers: 0
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: European (Finnish)
population: African
population: Other
population: South Asian
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: A
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: DP

X-135498567-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24135498567
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24135498567
    reference: chr 0
allele count: 2
allele frequency: 2.326257633032858e-5
allele num: 85975
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000377699
  ensembl transcript: ENST00000394143
  gene symbol: GPR112
  hgvsc: ENST00000394143.1:c.9206-46G>C
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000287534
  ensembl transcript: ENST00000287534
  gene symbol: GPR112
  hgvsc: ENST00000287534.4:c.8362+2081G>C
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000416526
  ensembl transcript: ENST00000412101
  gene symbol: GPR112
  hgvsc: ENST00000412101.1:c.8591-46G>C
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000359686
  ensembl transcript: ENST00000370652
  gene symbol: GPR112
  hgvsc: ENST00000370652.1:c.9206-46G>C
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000377697
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  gene symbol: GPR112
  hgvsc: ENST00000394141.1:c.8591-46G>C
  variant of: http://identifiers.org/hgnc/18992
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: Latino
population: African
population: Other
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
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site quality: QD
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X-135498568-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24135498568
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24135498568
    reference: chr 0
allele count: 3
allele frequency: 3.487966515521451e-5
allele num: 86010
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000359686
  ensembl transcript: ENST00000370652
  gene symbol: GPR112
  hgvsc: ENST00000370652.1:c.9206-45T>G
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000287534
  ensembl transcript: ENST00000287534
  gene symbol: GPR112
  hgvsc: ENST00000287534.4:c.8362+2082T>G
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000377697
  ensembl transcript: ENST00000394141
  gene symbol: GPR112
  hgvsc: ENST00000394141.1:c.8591-45T>G
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000416526
  ensembl transcript: ENST00000412101
  gene symbol: GPR112
  hgvsc: ENST00000412101.1:c.8591-45T>G
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000377699
  ensembl transcript: ENST00000394143
  gene symbol: GPR112
  hgvsc: ENST00000394143.1:c.9206-45T>G
  variant of: http://identifiers.org/hgnc/18992
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: East Asian
population: African
population: European (Non-Finnish)
population: Latino
population: South Asian
population: Other
population: European (Finnish)
reference allele: T
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
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site quality: VQSLOD

X-135498578-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24135498578
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24135498578
    reference: chr 0
allele count: 40
allele frequency: 4.645059398697061e-4
allele num: 86113
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000287534
  ensembl transcript: ENST00000287534
  gene symbol: GPR112
  hgvsc: ENST00000287534.4:c.8362+2092C>T
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000416526
  ensembl transcript: ENST00000412101
  gene symbol: GPR112
  hgvsc: ENST00000412101.1:c.8591-35C>T
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000377699
  ensembl transcript: ENST00000394143
  gene symbol: GPR112
  hgvsc: ENST00000394143.1:c.9206-35C>T
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
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  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000377697
  ensembl transcript: ENST00000394141
  gene symbol: GPR112
  hgvsc: ENST00000394141.1:c.8591-35C>T
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000359686
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  gene symbol: GPR112
  hgvsc: ENST00000370652.1:c.9206-35C>T
  variant of: http://identifiers.org/hgnc/18992
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1214
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: European (Finnish)
population: African
population: Other
population: European (Non-Finnish)
population: Latino
population: East Asian
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: DP
site quality: QD
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site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum

X-135498596-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24135498596
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24135498596
    reference: chr 0
allele count: 1
allele frequency: 1.15300357431108e-5
allele num: 86730
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000359686
  ensembl transcript: ENST00000370652
  gene symbol: GPR112
  hgvsc: ENST00000370652.1:c.9206-17T>C
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000416526
  ensembl transcript: ENST00000412101
  gene symbol: GPR112
  hgvsc: ENST00000412101.1:c.8591-17T>C
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000377699
  ensembl transcript: ENST00000394143
  gene symbol: GPR112
  hgvsc: ENST00000394143.1:c.9206-17T>C
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000287534
  ensembl transcript: ENST00000287534
  gene symbol: GPR112
  hgvsc: ENST00000287534.4:c.8362+2110T>C
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000377697
  ensembl transcript: ENST00000394141
  gene symbol: GPR112
  hgvsc: ENST00000394141.1:c.8591-17T>C
  variant of: http://identifiers.org/hgnc/18992
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 716
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1069
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 835
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 508
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22328
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 921
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1484
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 419
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4098
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2301
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11198
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 757
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2013
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33614
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 111
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2855
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 982
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 154
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 197
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 234
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Other
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
population: European (Finnish)
reference allele: T
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD

X-135498597-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24135498597
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24135498597
    reference: chr 0
allele count: 1
allele frequency: 1.152511899685364e-5
allele num: 86767
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000287534
  ensembl transcript: ENST00000287534
  gene symbol: GPR112
  hgvsc: ENST00000287534.4:c.8362+2111T>C
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000359686
  ensembl transcript: ENST00000370652
  gene symbol: GPR112
  hgvsc: ENST00000370652.1:c.9206-16T>C
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000416526
  ensembl transcript: ENST00000412101
  gene symbol: GPR112
  hgvsc: ENST00000412101.1:c.8591-16T>C
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000377699
  ensembl transcript: ENST00000394143
  gene symbol: GPR112
  hgvsc: ENST00000394143.1:c.9206-16T>C
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000377697
  ensembl transcript: ENST00000394141
  gene symbol: GPR112
  hgvsc: ENST00000394141.1:c.8591-16T>C
  variant of: http://identifiers.org/hgnc/18992
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 676
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 757
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12736
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11184
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1485
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22337
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2300
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 508
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genotype quality: GenotypeQuality
  all individuals: 30
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 235
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 174
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 154
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2151
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7670
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 953
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD

X-135498601-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24135498601
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24135498601
    reference: chr 0
allele count: 1
allele frequency: 1.15068177895403e-5
allele num: 86905
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000377699
  ensembl transcript: ENST00000394143
  gene symbol: GPR112
  hgvsc: ENST00000394143.1:c.9206-12T>C
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000287534
  ensembl transcript: ENST00000287534
  gene symbol: GPR112
  hgvsc: ENST00000287534.4:c.8362+2115T>C
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000416526
  ensembl transcript: ENST00000412101
  gene symbol: GPR112
  hgvsc: ENST00000412101.1:c.8591-12T>C
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000377697
  ensembl transcript: ENST00000394141
  gene symbol: GPR112
  hgvsc: ENST00000394141.1:c.8591-12T>C
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000359686
  ensembl transcript: ENST00000370652
  gene symbol: GPR112
  hgvsc: ENST00000370652.1:c.9206-12T>C
  variant of: http://identifiers.org/hgnc/18992
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 757
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 692
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1484
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11186
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13037
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 508
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1070
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4096
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 921
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22393
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2301
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 160
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
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  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34126
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 842
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2152
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 210
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7688
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 114
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: T
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: QD

X-135498608-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24135498608
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24135498608
    reference: chr 0
allele count: 1
allele frequency: 1.148237455505799e-5
allele num: 87090
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000377699
  ensembl transcript: ENST00000394143
  gene symbol: GPR112
  hgvsc: ENST00000394143.1:c.9206-5T>G
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000377697
  ensembl transcript: ENST00000394141
  gene symbol: GPR112
  hgvsc: ENST00000394141.1:c.8591-5T>G
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000416526
  ensembl transcript: ENST00000412101
  gene symbol: GPR112
  hgvsc: ENST00000412101.1:c.8591-5T>G
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000287534
  ensembl transcript: ENST00000287534
  gene symbol: GPR112
  hgvsc: ENST00000287534.4:c.8362+2122T>G
  variant of: http://identifiers.org/hgnc/18992
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156920
  ensembl protein: ENSP00000359686
  ensembl transcript: ENST00000370652
  gene symbol: GPR112
  hgvsc: ENST00000370652.1:c.9206-5T>G
  variant of: http://identifiers.org/hgnc/18992
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 555
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13323
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 921
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 508
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11185
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4092
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2297
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1484
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1071
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22503
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 758
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2006
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 131
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2851
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1361
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2133
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 727
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
hgvs: c.9206-5T>G
num of homozygotes: 0
population: European (Finnish)
population: Other
population: African
population: European (Non-Finnish)
population: South Asian
population: Latino
population: East Asian
reference allele: T
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD

GenotypeQuality
all individuals: 26
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 189
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 28479
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2810
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3666
bin: 7.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 568
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 45988
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6564
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8173
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.080263584314573e-4
allele num: 9257
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4529
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5956
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.70121e6

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.943e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-3

VQSLOD
type: SiteQuality
SIO_000300: -3.257e-1

QD
type: SiteQuality
SIO_000300: 3.365e1

GenotypeQuality
all individuals: 27922
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 122
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7979
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2805
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 2.198526986918765e-5
allele num: 45485
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 557
num of homozygotes: 0

African
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allele frequency: 0.0e0
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ReadPosRankSum
type: SiteQuality
SIO_000300: 1.36e0

MQ
type: SiteQuality
SIO_000300: 5.968e1

QD
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FS
type: SiteQuality
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BaseQRankSum
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ClippingRankSum
type: SiteQuality
SIO_000300: -8.76e-1

VQSLOD
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: -8.58e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.39e-2

DP
type: SiteQuality
SIO_000300: 1.680245e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 9239
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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South Asian
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allele frequency: 1.76772140710624e-4
allele num: 5657
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 45476
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African
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allele frequency: 0.0e0
allele num: 7942
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 6524
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4528
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
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SIO_000300: -5.999999999999999e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
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SIO_000300: 1.67882e6

VQSLOD
type: SiteQuality
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QD
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 9239
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 7942
num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 555
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 6521
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4526
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European (Non-Finnish)
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allele count: 1
allele frequency: 2.199010445299615e-5
allele num: 45475
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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VQSLOD
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ReadPosRankSum
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BaseQRankSum
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QD
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InbreedingCoeff
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ClippingRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 1.1377e1

DP
type: SiteQuality
SIO_000300: 1.678531e6

MQ
type: SiteQuality
SIO_000300: 5.964e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4523
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 9233
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 7862
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East Asian
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allele frequency: 0.0e0
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South Asian
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allele count: 1
allele frequency: 1.776514478593e-4
allele num: 5629
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 45398
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.84e-1

QD
type: SiteQuality
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MQRankSum
type: SiteQuality
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InbreedingCoeff
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MQ
type: SiteQuality
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VQSLOD
type: SiteQuality
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FS
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.674077e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.22e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 7796
num of homozygotes: 0

Latino
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allele frequency: 1.083071591032167e-4
allele num: 9233
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South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 45371
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 6505
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4522
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 553
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
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QD
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: -1.732e0

ReadPosRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.670792e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.637e0

VQSLOD
type: SiteQuality
SIO_000300: -3.586e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 8587
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7995
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 6092
num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 4.625560849252972e-5
allele num: 43238
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 565
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African
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allele count: 0
allele frequency: 0.0e0
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ClippingRankSum
type: SiteQuality
SIO_000300: 2.15e0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 2.272e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.327e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.620000000000001e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.2e-2

DP
type: SiteQuality
SIO_000300: 1.642865e6

VQSLOD
type: SiteQuality
SIO_000300: 2.17e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.01e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8069
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4066
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 43493
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 8110
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Latino
type: Population
allele count: 1
allele frequency: 1.159823706796567e-4
allele num: 8622
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.04e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.29e0

MQRankSum
type: SiteQuality
SIO_000300: -4.41e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.3e-2

MQ
type: SiteQuality
SIO_000300: 5.808e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.2e-3

FS
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.393e1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.75e-1

DP
type: SiteQuality
SIO_000300: 1.660748e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4308
num of homozygotes: 0

European (Non-Finnish)
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allele count: 5
allele frequency: 1.083165442689716e-4
allele num: 46161
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
allele num: 601
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South Asian
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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East Asian
type: Population
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allele frequency: 0.0e0
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DP
type: SiteQuality
SIO_000300: 1.785632e6

FS
type: SiteQuality
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QD
type: SiteQuality
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ClippingRankSum
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BaseQRankSum
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MQRankSum
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InbreedingCoeff
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MQ
type: SiteQuality
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VQSLOD
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele frequency: 0.0e0
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Other
type: Population
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allele frequency: 0.0e0
allele num: 608
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Latino
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allele frequency: 0.0e0
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African
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East Asian
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allele frequency: 1.538224888478696e-4
allele num: 6501
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European (Finnish)
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 46628
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VQSLOD
type: SiteQuality
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DP
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ClippingRankSum
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MQ
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BaseQRankSum
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MQRankSum
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InbreedingCoeff
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FS
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ReadPosRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele frequency: 0.0e0
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Latino
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East Asian
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European (Non-Finnish)
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European (Finnish)
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South Asian
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Other
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FS
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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MQRankSum
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DP
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MQ
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InbreedingCoeff
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VQSLOD
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BaseQRankSum
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ClippingRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele frequency: 2.102607232968881e-5
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East Asian
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South Asian
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Latino
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African
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allele num: 8452
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Other
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European (Finnish)
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allele frequency: 0.0e0
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BaseQRankSum
type: SiteQuality
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ClippingRankSum
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DP
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InbreedingCoeff
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ReadPosRankSum
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FS
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MQ
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QD
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VQSLOD
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MQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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Other
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African
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European (Finnish)
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East Asian
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South Asian
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allele frequency: 3.126628452318916e-4
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European (Non-Finnish)
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allele count: 18
allele frequency: 3.783261171129513e-4
allele num: 47578
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QD
type: SiteQuality
SIO_000300: 1.227e1

VQSLOD
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FS
type: SiteQuality
SIO_000300: 1.118e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.5e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 2.87e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.13e-1

DP
type: SiteQuality
SIO_000300: 1.855284e6

MQ
type: SiteQuality
SIO_000300: 5.951e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.7e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.874e-1

GenotypeQuality
all individuals: 13
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 955
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 124
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 298
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 913
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 545
bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 620
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6616
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.101635072086083e-5
allele num: 47582
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9598
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.182452406290647e-4
allele num: 8457
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4451
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9254
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.976e0

MQRankSum
type: SiteQuality
SIO_000300: 3.39e-1

QD
type: SiteQuality
SIO_000300: 3.211e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.59e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.3e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.7e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.75e-2

VQSLOD
type: SiteQuality
SIO_000300: -1.978e0

DP
type: SiteQuality
SIO_000300: 1.853741e6

GenotypeQuality
all individuals: 9
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variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
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GenotypeQuality
all individuals: 5311
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variant carriers: 4

GenotypeQuality
all individuals: 4082
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variant carriers: 0

GenotypeQuality
all individuals: 541
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variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 4.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9236
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 1.263317471680633e-4
allele num: 47494
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4440
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9563
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8449
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 619
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.849197e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.22e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.43e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.51e-1

FS
type: SiteQuality
SIO_000300: 1.761e0

VQSLOD
type: SiteQuality
SIO_000300: -4.204e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.159e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.72e-1

QD
type: SiteQuality
SIO_000300: 1.322e1

MQ
type: SiteQuality
SIO_000300: 5.929e1

GenotypeQuality
all individuals: 913
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5309
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 928
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variant carriers: 0

GenotypeQuality
all individuals: 152
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variant carriers: 0

GenotypeQuality
all individuals: 172
bin: 5.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47479
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8448
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4439
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 618
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.046353458198179e-4
allele num: 9557
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9235
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.34e-2

QD
type: SiteQuality
SIO_000300: 1.16e0

VQSLOD
type: SiteQuality
SIO_000300: -4.329e-1

FS
type: SiteQuality
SIO_000300: 6.456e0

MQ
type: SiteQuality
SIO_000300: 5.909e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.673e0

DP
type: SiteQuality
SIO_000300: 1.848117e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.51e0

MQRankSum
type: SiteQuality
SIO_000300: -8.276999999999999e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.051e0

GenotypeQuality
all individuals: 211
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44622
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variant carriers: 0

GenotypeQuality
all individuals: 161
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GenotypeQuality
all individuals: 97
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GenotypeQuality
all individuals: 909
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variant carriers: 0

GenotypeQuality
all individuals: 891
bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6593
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.113360666131282e-5
allele num: 47318
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8433
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4415
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 613
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9493
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9217
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.16e-1

DP
type: SiteQuality
SIO_000300: 1.840613e6

MQ
type: SiteQuality
SIO_000300: 5.894e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -1.9e-2

QD
type: SiteQuality
SIO_000300: 1.074e1

FS
type: SiteQuality
SIO_000300: 4.439e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.444e0

VQSLOD
type: SiteQuality
SIO_000300: -4.677e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.75e0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 106
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variant carriers: 0

GenotypeQuality
all individuals: 901
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variant carriers: 0

GenotypeQuality
all individuals: 271
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variant carriers: 0

GenotypeQuality
all individuals: 4009
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variant carriers: 0

GenotypeQuality
all individuals: 211
bin: 8.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 610
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4396
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9459
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9201
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.119497255251054e-5
allele num: 47181
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8418
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6585
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -9.77e-1

FS
type: SiteQuality
SIO_000300: 5.152e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.333e0

MQRankSum
type: SiteQuality
SIO_000300: -1.85e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.48e0

DP
type: SiteQuality
SIO_000300: 1.835228e6

QD
type: SiteQuality
SIO_000300: 8.119999999999999e0

VQSLOD
type: SiteQuality
SIO_000300: 5.06e-1

MQ
type: SiteQuality
SIO_000300: 5.945e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

GenotypeQuality
all individuals: 95
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 212
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 535
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variant carriers: 0

GenotypeQuality
all individuals: 271
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variant carriers: 0

GenotypeQuality
all individuals: 120
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 903
bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.11999152003392e-5
allele num: 47170
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8417
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9446
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 611
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9204
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4398
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6583
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -5.56e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.26e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.541e0

FS
type: SiteQuality
SIO_000300: 2.522e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.879e1

VQSLOD
type: SiteQuality
SIO_000300: -9.461000000000001e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.59e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.54e-2

DP
type: SiteQuality
SIO_000300: 1.835104e6

GenotypeQuality
all individuals: 166
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 206
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 43883
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 250
bin: 3.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 9
allele frequency: 1.911761582088918e-4
allele num: 47077
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.189767995240928e-4
allele num: 8405
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4383
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9428
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 606
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6581
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9188
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.08e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.083e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.29e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.830256e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.689e0

MQRankSum
type: SiteQuality
SIO_000300: 6.03e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.09e-1

MQ
type: SiteQuality
SIO_000300: 5.979e1

QD
type: SiteQuality
SIO_000300: 1.541e1

GenotypeQuality
all individuals: 859
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 531
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variant carriers: 0

GenotypeQuality
all individuals: 166
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variant carriers: 0

GenotypeQuality
all individuals: 20
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variant carriers: 0

GenotypeQuality
all individuals: 15
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GenotypeQuality
all individuals: 3981
bin: 6.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9428
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 606
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8405
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4383
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9188
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47077
num of homozygotes: 0

East Asian
type: Population
allele count: 9
allele frequency: 1.367573317125057e-3
allele num: 6581
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.29e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 6.03e-1

BaseQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 1.083e-1

DP
type: SiteQuality
SIO_000300: 1.830256e6

MQ
type: SiteQuality
SIO_000300: 5.979e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.09e-1

QD
type: SiteQuality
SIO_000300: 1.541e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.08e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6556
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4367
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 46920
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9392
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 607
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.9e0

FS
type: SiteQuality
SIO_000300: 4.637e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.95e-1

DP
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 4.21e-1

BaseQRankSum
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.45e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.14e0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 3781
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 128
bin: 4.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8394
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 607
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9163
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 46920
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 9392
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6556
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4367
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.14e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.95e-1

QD
type: SiteQuality
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VQSLOD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

FS
type: SiteQuality
SIO_000300: 4.637e0

BaseQRankSum
type: SiteQuality
SIO_000300: 9.22e-1

DP
type: SiteQuality
SIO_000300: 1.822524e6

MQRankSum
type: SiteQuality
SIO_000300: 4.21e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 826
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 3831
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6555
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8370
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4346
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 604
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9318
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9107
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 46679
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -8.249e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.0e-2

DP
type: SiteQuality
SIO_000300: 1.81139e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.63e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: 4.44e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.69e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.8e-1

MQ
type: SiteQuality
SIO_000300: 5.883e1

GenotypeQuality
all individuals: 171
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5306
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 263
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 282
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 575
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 808
bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4312
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8342
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9239
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 46308
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.103265666372463e-4
allele num: 9064
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 599
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6519
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.793106e6

FS
type: SiteQuality
SIO_000300: 1.895e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.51e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.9e-3

VQSLOD
type: SiteQuality
SIO_000300: -5.684e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.95e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.798e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.26e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 7.08e0

GenotypeQuality
all individuals: 145
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36064
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9597
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 267
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 503
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 45261
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8989
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 578
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8858
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6421
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.208167210341911e-4
allele num: 8277
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4201
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 6.43e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.36e-1

MQRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 1.463e0

DP
type: SiteQuality
SIO_000300: 1.732988e6

MQ
type: SiteQuality
SIO_000300: 5.91e1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.495e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.3e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

QD
type: SiteQuality
SIO_000300: 1.281e1

GenotypeQuality
all individuals: 31714
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 3

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 266
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4105
num of homozygotes: 0

East Asian
type: Population
allele count: 3
allele frequency: 4.743083003952569e-4
allele num: 6325
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8189
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 44362
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8693
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 2.274795268425842e-4
allele num: 8792
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.748251748251748e-3
allele num: 572
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -4.08e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.015e0

VQSLOD
type: SiteQuality
SIO_000300: 4.79e-1

QD
type: SiteQuality
SIO_000300: 1.514e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.959e0

DP
type: SiteQuality
SIO_000300: 1.673899e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.62e-2

FS
type: SiteQuality
SIO_000300: 5.62e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.87e-1

GenotypeQuality
all individuals: 111
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 726
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1945
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variant carriers: 0

GenotypeQuality
all individuals: 198
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1559
bin: 3.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 43885
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8603
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4061
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8660
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.227897838899803e-4
allele num: 8144
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6238
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 563
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.47e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.64e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.822e0

DP
type: SiteQuality
SIO_000300: 1.644733e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.064e0

FS
type: SiteQuality
SIO_000300: 4.564e0

QD
type: SiteQuality
SIO_000300: 2.749e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

MQ
type: SiteQuality
SIO_000300: 5.964e1

MQRankSum
type: SiteQuality
SIO_000300: 1.82e0

GenotypeQuality
all individuals: 780
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 704
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 265
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5303
bin: 9.75e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.325635479894881e-5
allele num: 42999
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8458
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 553
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8065
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3999
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6149
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8448
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.62e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.0e-4

FS
type: SiteQuality
SIO_000300: 2.119e0

DP
type: SiteQuality
SIO_000300: 1.587515e6

BaseQRankSum
type: SiteQuality
SIO_000300: -3.595e0

MQRankSum
type: SiteQuality
SIO_000300: 1.21e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.3e-3

MQ
type: SiteQuality
SIO_000300: 5.959e1

QD
type: SiteQuality
SIO_000300: 1.549e1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.4e-1

GenotypeQuality
all individuals: 441
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4862
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variant carriers: 0

GenotypeQuality
all individuals: 264
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variant carriers: 0

GenotypeQuality
all individuals: 649
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variant carriers: 0

GenotypeQuality
all individuals: 198
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 1.234415504258734e-4
allele num: 8101
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5900
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3851
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 41144
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 522
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7963
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7900
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.28e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.1e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -9.19e-1

QD
type: SiteQuality
SIO_000300: 1.389e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.18e0

MQRankSum
type: SiteQuality
SIO_000300: 6.6e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.27e0

DP
type: SiteQuality
SIO_000300: 1.449961e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 9527
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4393
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1707
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variant carriers: 0

GenotypeQuality
all individuals: 479
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variant carriers: 0

GenotypeQuality
all individuals: 490
bin: 5.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7833
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7726
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 502
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.538328764341557e-5
allele num: 39396
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5698
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3687
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7590
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.87e1

VQSLOD
type: SiteQuality
SIO_000300: -7.427e-1

QD
type: SiteQuality
SIO_000300: 1.21e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.900000000000001e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -4.342e0

MQRankSum
type: SiteQuality
SIO_000300: -2.07e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.8e-3

DP
type: SiteQuality
SIO_000300: 1.386434e6

ClippingRankSum
type: SiteQuality
SIO_000300: -2.53e-1

GenotypeQuality
all individuals: 473
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 468
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 193
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variant carriers: 0

GenotypeQuality
all individuals: 622
bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5641
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3620
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 501
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7491
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7689
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7727
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 38909
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.362575e6

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.694e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.4e-3

VQSLOD
type: SiteQuality
SIO_000300: 3.98e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 193
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 615
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6439
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 467
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 365
bin: 5.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7383
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5570
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3572
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7633
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.314751511964239e-4
allele num: 7606
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 38328
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 490
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.699999999999999e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -1.7e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -6.38e-1

QD
type: SiteQuality
SIO_000300: 1.517e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 3.32e-1

DP
type: SiteQuality
SIO_000300: 1.349254e6

BaseQRankSum
type: SiteQuality
SIO_000300: 3.4e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.55e-1

GenotypeQuality
all individuals: 1419
bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 2379
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2818
bin: 7.75e1
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GenotypeQuality
all individuals: 1790
bin: 5.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7697
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 565
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4522
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6539
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 45845
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6171
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 2.158195748354376e-4
allele num: 9267
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -9.21e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.3e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.5e-3

FS
type: SiteQuality
SIO_000300: 2.1e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.17e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.66e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.07e-1

QD
type: SiteQuality
SIO_000300: 1.281e1

DP
type: SiteQuality
SIO_000300: 2.455697e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 72
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2856
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1863
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GenotypeQuality
all individuals: 79
bin: 4.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7757
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 3.047386865762608e-4
allele num: 6563
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6284
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9266
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4526
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 570
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 46099
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.05e0

DP
type: SiteQuality
SIO_000300: 2.5021e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.07e0

MQ
type: SiteQuality
SIO_000300: 5.998e1

FS
type: SiteQuality
SIO_000300: 5.023e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.95e-1

QD
type: SiteQuality
SIO_000300: 1.659e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.1e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 9.59e0

MQRankSum
type: SiteQuality
SIO_000300: 8.2e-2

GenotypeQuality
all individuals: 4010
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3653
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28937
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 2479
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 5.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 46658
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7992
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6766
num of homozygotes: 0

Latino
type: Population
allele count: 4
allele frequency: 4.308023694130318e-4
allele num: 9285
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 585
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.141e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.71e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.83e-1

DP
type: SiteQuality
SIO_000300: 2.531478e6

MQ
type: SiteQuality
SIO_000300: 5.958e1

QD
type: SiteQuality
SIO_000300: 1.252e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-3

VQSLOD
type: SiteQuality
SIO_000300: 2.68e-1

MQRankSum
type: SiteQuality
SIO_000300: -6.43e-1

FS
type: SiteQuality
SIO_000300: 6.866e0

GenotypeQuality
all individuals: 10891
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4046
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2481
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3069
bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6956
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.135246514210066e-5
allele num: 46833
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9287
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 590
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8104
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.65e-1

DP
type: SiteQuality
SIO_000300: 2.538718e6

ClippingRankSum
type: SiteQuality
SIO_000300: -4.99e-1

MQ
type: SiteQuality
SIO_000300: 5.902e1

VQSLOD
type: SiteQuality
SIO_000300: -3.146e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.6e-3

MQRankSum
type: SiteQuality
SIO_000300: -5.45e-1

FS
type: SiteQuality
SIO_000300: 2.723e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.769e0

QD
type: SiteQuality
SIO_000300: 1.34e0

GenotypeQuality
all individuals: 28947
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 2936
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 75
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2487
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 5.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7586
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

Latino
type: Population
allele count: 4
allele frequency: 4.302463160159191e-4
allele num: 9297
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8278
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 602
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47197
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.553538e6

FS
type: SiteQuality
SIO_000300: 8.9e-1

MQ
type: SiteQuality
SIO_000300: 5.986e1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.159999999999999e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.11e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -2.018e0

MQRankSum
type: SiteQuality
SIO_000300: -1.23e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.85e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.029e-1

QD
type: SiteQuality
SIO_000300: 1.925e1

GenotypeQuality
all individuals: 1975
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 135
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2939
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28950
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 56
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 4.75e1
variant carriers: 0

Latino
type: Population
allele count: 3
allele frequency: 3.226153349822562e-4
allele num: 9299
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6611
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8286
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 602
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47237
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7639
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.582e0

MQRankSum
type: SiteQuality
SIO_000300: -2.45e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.732e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.93e-2

MQ
type: SiteQuality
SIO_000300: 5.978e1

DP
type: SiteQuality
SIO_000300: 2.555173e6

FS
type: SiteQuality
SIO_000300: 5.341e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.72e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.88e-1

QD
type: SiteQuality
SIO_000300: 2.093e1

GenotypeQuality
all individuals: 1969
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 193
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2830
bin: 2.25e1
variant carriers: 2

GenotypeQuality
all individuals: 2482
bin: 9.25e1
variant carriers: 4

GenotypeQuality
all individuals: 2928
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11376
bin: 6.25e1
variant carriers: 1

Other
type: Population
allele count: 3
allele frequency: 4.983388704318937e-3
allele num: 602
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6613
num of homozygotes: 0

Latino
type: Population
allele count: 6
allele frequency: 6.452306699645124e-4
allele num: 9299
num of homozygotes: 0

South Asian
type: Population
allele count: 7
allele frequency: 9.138381201044386e-4
allele num: 7660
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 13
allele frequency: 2.869757174392936e-3
allele num: 4530
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 251
allele frequency: 5.311944467959028e-3
allele num: 47252
num of homozygotes: 1

African
type: Population
allele count: 7
allele frequency: 8.432718949524154e-4
allele num: 8301
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.72e-1

DP
type: SiteQuality
SIO_000300: 2.576023e6

VQSLOD
type: SiteQuality
SIO_000300: 2.622e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.624e-1

MQ
type: SiteQuality
SIO_000300: 5.963e1

FS
type: SiteQuality
SIO_000300: 2.071e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.875e0

MQRankSum
type: SiteQuality
SIO_000300: 5.0e-1

QD
type: SiteQuality
SIO_000300: 1.75e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.38e-1

GenotypeQuality
all individuals: 155
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11700
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 92
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29094
bin: 9.75e1
variant carriers: 7

GenotypeQuality
all individuals: 60
bin: 5.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8350
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 8
allele frequency: 1.689082194962312e-4
allele num: 47363
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9301
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7952
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 607
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6616
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.88e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.93e0

QD
type: SiteQuality
SIO_000300: 1.92e1

MQRankSum
type: SiteQuality
SIO_000300: 2.69e-1

DP
type: SiteQuality
SIO_000300: 2.582254e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.88e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 6.54e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.94e1

GenotypeQuality
all individuals: 4154
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29118
bin: 9.75e1
variant carriers: 38

GenotypeQuality
all individuals: 2485
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 5.75e1
variant carriers: 2

GenotypeQuality
all individuals: 213
bin: 3.25e1
variant carriers: 3

GenotypeQuality
all individuals: 2946
bin: 8.25e1
variant carriers: 2

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8374
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.074922068150059e-4
allele num: 9303
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6617
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.647446457990115e-3
allele num: 607
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 8.435437271979586e-5
allele num: 47419
num of homozygotes: 0

South Asian
type: Population
allele count: 52
allele frequency: 6.446014627494731e-3
allele num: 8067
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.621e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.7e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 3.37e0

FS
type: SiteQuality
SIO_000300: 6.17e-1

MQ
type: SiteQuality
SIO_000300: 5.97e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.17e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.486e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.96e-1

QD
type: SiteQuality
SIO_000300: 2.263e1

DP
type: SiteQuality
SIO_000300: 2.586692e6

GenotypeQuality
all individuals: 182
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1541
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2952
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1986
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2487
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 4.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8386
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9305
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.107614812316901e-5
allele num: 47447
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8114
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6618
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 609
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.586975e6

QD
type: SiteQuality
SIO_000300: 2.686e1

VQSLOD
type: SiteQuality
SIO_000300: 4.06e0

MQ
type: SiteQuality
SIO_000300: 5.978e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.02e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
all individuals: 17
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 83
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2491
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 170
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 216
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1993
bin: 7.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9311
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8407
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8361
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47530
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.509889778046203e-4
allele num: 6623
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 6.66e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.096e0

MQRankSum
type: SiteQuality
SIO_000300: 2.44e-1

DP
type: SiteQuality
SIO_000300: 2.592733e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.6e-3

FS
type: SiteQuality
SIO_000300: 3.342e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.152e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.301e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.34e-1

GenotypeQuality
all individuals: 20
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 4.75e1
variant carriers: 3

GenotypeQuality
all individuals: 4224
bin: 6.75e1
variant carriers: 2

GenotypeQuality
all individuals: 2959
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29130
bin: 9.75e1
variant carriers: 40

South Asian
type: Population
allele count: 45
allele frequency: 5.189712835889747e-3
allele num: 8671
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9312
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8430
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 9
allele frequency: 1.889684422701409e-4
allele num: 47627
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6627
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.618122977346278e-3
allele num: 618
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.968e1

VQSLOD
type: SiteQuality
SIO_000300: 1.805e1

DP
type: SiteQuality
SIO_000300: 2.602303e6

MQRankSum
type: SiteQuality
SIO_000300: 3.68e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.8e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.787e-1

FS
type: SiteQuality
SIO_000300: 5.78e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.54e-1

QD
type: SiteQuality
SIO_000300: 2.043e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.157e0

GenotypeQuality
all individuals: 12581
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 146
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2964
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1556
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 1.185677021579322e-4
allele num: 8434
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6629
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8770
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9312
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 619
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47655
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.59e-1

MQ
type: SiteQuality
SIO_000300: 5.932e1

VQSLOD
type: SiteQuality
SIO_000300: -2.16e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.59e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 1.38e0

QD
type: SiteQuality
SIO_000300: 2.061e1

MQRankSum
type: SiteQuality
SIO_000300: 1.64e0

FS
type: SiteQuality
SIO_000300: 6.32e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.49e-1

DP
type: SiteQuality
SIO_000300: 2.604066e6

GenotypeQuality
all individuals: 47
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2967
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12949
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1557
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2013
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29137
bin: 9.75e1
variant carriers: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9313
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8448
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9013
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 621
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6634
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.095820933059479e-5
allele num: 47714
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.627e1

VQSLOD
type: SiteQuality
SIO_000300: -1.533e0

QD
type: SiteQuality
SIO_000300: 1.76e0

FS
type: SiteQuality
SIO_000300: 5.52e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.01e0

DP
type: SiteQuality
SIO_000300: 2.610145e6

MQRankSum
type: SiteQuality
SIO_000300: -6.021e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.24e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.3e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.17e0

GenotypeQuality
all individuals: 55
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4274
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1559
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29137
bin: 9.75e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.09507447989776e-5
allele num: 47731
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8451
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6634
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9314
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 621
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9086
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.537e1

MQRankSum
type: SiteQuality
SIO_000300: 2.6e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.84e-1

DP
type: SiteQuality
SIO_000300: 2.612054e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 9.3e-1

MQ
type: SiteQuality
SIO_000300: 5.953e1

FS
type: SiteQuality
SIO_000300: 2.776e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.830000000000001e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.44e0

GenotypeQuality
all individuals: 2973
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13267
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2031
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3170
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8468
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6637
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9222
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 622
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.093364036005861e-5
allele num: 47770
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9317
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.744e1

DP
type: SiteQuality
SIO_000300: 2.615908e6

QD
type: SiteQuality
SIO_000300: 4.0e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.12e0

FS
type: SiteQuality
SIO_000300: 1.3106e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -1.874e0

MQRankSum
type: SiteQuality
SIO_000300: -7.894e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.38e0

VQSLOD
type: SiteQuality
SIO_000300: -3.453e0

GenotypeQuality
all individuals: 89
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2042
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 3

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2981
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1566
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 4.183225266680611e-5
allele num: 47810
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 625
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9319
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9375
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.506704836522525e-4
allele num: 6637
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8484
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -9.67e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.35e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.48e-2

MQ
type: SiteQuality
SIO_000300: 5.937e1

FS
type: SiteQuality
SIO_000300: 1.1018e1

MQRankSum
type: SiteQuality
SIO_000300: 5.92e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.546e-1

DP
type: SiteQuality
SIO_000300: 2.620301e6

QD
type: SiteQuality
SIO_000300: 2.235e1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.78e-1

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2507
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 4383
bin: 6.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9595
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8496
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6638
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.089252883168979e-5
allele num: 47864
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9322
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 630
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.922e0

MQRankSum
type: SiteQuality
SIO_000300: 9.71e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.2e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -2.146e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 2.312e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.03e-1

DP
type: SiteQuality
SIO_000300: 2.625979e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.94e-1

GenotypeQuality
all individuals: 48
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3199
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2507
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29148
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 13945
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1567
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9322
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 630
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8504
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.087987806151212e-5
allele num: 47893
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6638
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9732
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.432e0

QD
type: SiteQuality
SIO_000300: 3.261e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.73e-2

MQ
type: SiteQuality
SIO_000300: 5.947e1

DP
type: SiteQuality
SIO_000300: 2.629841e6

FS
type: SiteQuality
SIO_000300: 1.3106e1

GenotypeQuality
all individuals: 253
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2513
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29153
bin: 9.75e1
variant carriers: 8

GenotypeQuality
all individuals: 1576
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3234
bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6637
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8513
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 632
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9324
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9935
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 8
allele frequency: 1.668543778417386e-4
allele num: 47946
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -6.251e0

MQRankSum
type: SiteQuality
SIO_000300: 1.31e0

VQSLOD
type: SiteQuality
SIO_000300: -1.039e-1

FS
type: SiteQuality
SIO_000300: 3.373e0

DP
type: SiteQuality
SIO_000300: 2.636808e6

MQ
type: SiteQuality
SIO_000300: 5.97e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.44e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.091e-1

QD
type: SiteQuality
SIO_000300: 2.411e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.41e-1

GenotypeQuality
all individuals: 24
bin: 4.25e1
variant carriers: 19

GenotypeQuality
all individuals: 911
bin: 9.25e1
variant carriers: 235

GenotypeQuality
all individuals: 1547
bin: 6.75e1
variant carriers: 157

GenotypeQuality
all individuals: 543
bin: 8.75e1
variant carriers: 124

GenotypeQuality
all individuals: 711
bin: 7.25e1
variant carriers: 91

GenotypeQuality
all individuals: 1172
bin: 7.75e1
variant carriers: 202

African
type: Population
allele count: 6568
allele frequency: 7.713446858485027e-1
allele num: 8515
num of homozygotes: 1967

South Asian
type: Population
allele count: 6964
allele frequency: 6.893684418926945e-1
allele num: 10102
num of homozygotes: 927

European (Finnish)
type: Population
allele count: 2587
allele frequency: 5.712077721351292e-1
allele num: 4529
num of homozygotes: 419

Other
type: Population
allele count: 417
allele frequency: 6.587677725118484e-1
allele num: 633
num of homozygotes: 79

East Asian
type: Population
allele count: 6016
allele frequency: 9.068435333132349e-1
allele num: 6634
num of homozygotes: 1906

Latino
type: Population
allele count: 7510
allele frequency: 8.062265163714439e-1
allele num: 9315
num of homozygotes: 2326

European (Non-Finnish)
type: Population
allele count: 28660
allele frequency: 5.974069287530746e-1
allele num: 47974
num of homozygotes: 5159

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.66e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.72e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.810999999999999e-1

QD
type: SiteQuality
SIO_000300: 2.73e1

VQSLOD
type: SiteQuality
SIO_000300: 4.301e1

BaseQRankSum
type: SiteQuality
SIO_000300: 8.080000000000001e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.33e-1

DP
type: SiteQuality
SIO_000300: 7.88061e6

MQ
type: SiteQuality
SIO_000300: 5.963e1

GenotypeQuality
all individuals: 3
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 11798
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1811
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32632
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 49
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 4.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8516
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47981
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 632
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6638
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9324
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.989653800238758e-4
allele num: 10052
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.99e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.03e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.370000000000001e-2

QD
type: SiteQuality
SIO_000300: 1.799e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.55e-1

DP
type: SiteQuality
SIO_000300: 3.23651e6

MQ
type: SiteQuality
SIO_000300: 5.957e1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.21e0

FS
type: SiteQuality
SIO_000300: 1.904e0

VQSLOD
type: SiteQuality
SIO_000300: -7.681e-1

GenotypeQuality
all individuals: 178
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4244
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2457
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
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variant carriers: 0

GenotypeQuality
all individuals: 2828
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 4.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47978
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10055
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9324
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8516
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.506477854775535e-4
allele num: 6638
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 632
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 3.238456e6

ClippingRankSum
type: SiteQuality
SIO_000300: 7.05e-1

FS
type: SiteQuality
SIO_000300: 3.542e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -2.038e0

MQRankSum
type: SiteQuality
SIO_000300: 3.27e-1

QD
type: SiteQuality
SIO_000300: 1.034e1

MQ
type: SiteQuality
SIO_000300: 5.976e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.57e0

VQSLOD
type: SiteQuality
SIO_000300: 6.46e-1

GenotypeQuality
all individuals: 4201
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1465
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 421
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variant carriers: 0

GenotypeQuality
all individuals: 2825
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 4.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 632
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8514
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.072731173567904e-4
allele num: 9322
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9938
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47950
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6637
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.377e1

MQ
type: SiteQuality
SIO_000300: 5.985e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.16e0

DP
type: SiteQuality
SIO_000300: 3.232051e6

MQRankSum
type: SiteQuality
SIO_000300: 2.58e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.692e0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -1.254e0

GenotypeQuality
all individuals: 1463
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2450
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4175
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3043
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2824
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47927
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6637
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 631
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8513
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9321
num of homozygotes: 0

South Asian
type: Population
allele count: 5
allele frequency: 5.068937550689375e-4
allele num: 9864
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.483e-1

QD
type: SiteQuality
SIO_000300: 1.397e1

VQSLOD
type: SiteQuality
SIO_000300: 3.24e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.11e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 4.7e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.956e0

DP
type: SiteQuality
SIO_000300: 3.228163e6

MQ
type: SiteQuality
SIO_000300: 5.927e1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.7e-1

GenotypeQuality
all individuals: 4062
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 115
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32634
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 125
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1461
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8511
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 6.26605677047434e-5
allele num: 47877
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6636
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.589825119236884e-3
allele num: 629
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9320
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9678
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.71e-1

DP
type: SiteQuality
SIO_000300: 3.221666e6

MQ
type: SiteQuality
SIO_000300: 5.95e1

QD
type: SiteQuality
SIO_000300: 1.971e1

VQSLOD
type: SiteQuality
SIO_000300: 6.67e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.3e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -1.28e-1

MQRankSum
type: SiteQuality
SIO_000300: -4.19e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.374e-1

FS
type: SiteQuality
SIO_000300: 1.144e0

GenotypeQuality
all individuals: 74
bin: 3.75e1
variant carriers: 1

GenotypeQuality
all individuals: 32639
bin: 9.75e1
variant carriers: 730

GenotypeQuality
all individuals: 2809
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 130
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2454
bin: 9.25e1
variant carriers: 4

GenotypeQuality
all individuals: 36
bin: 5.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9591
num of homozygotes: 0

African
type: Population
allele count: 701
allele frequency: 8.239304184297132e-2
allele num: 8508
num of homozygotes: 20

Latino
type: Population
allele count: 47
allele frequency: 5.043459598669385e-3
allele num: 9319
num of homozygotes: 0

Other
type: Population
allele count: 5
allele frequency: 7.961783439490446e-3
allele num: 628
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6635
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 8
allele frequency: 1.671751577715551e-4
allele num: 47854
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.685e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.94e-1

DP
type: SiteQuality
SIO_000300: 3.228313e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.27e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.112e0

VQSLOD
type: SiteQuality
SIO_000300: 2.472e1

MQRankSum
type: SiteQuality
SIO_000300: 3.63e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.963e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.311e-1

GenotypeQuality
all individuals: 1473
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3018
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 5.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1267
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1759
bin: 7.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.090169930815375e-5
allele num: 47843
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6635
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9547
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8509
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 627
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9319
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.859999999999999e-2

VQSLOD
type: SiteQuality
SIO_000300: 2.89e0

MQ
type: SiteQuality
SIO_000300: 5.94e1

QD
type: SiteQuality
SIO_000300: 3.035e1

DP
type: SiteQuality
SIO_000300: 3.130976e6

GenotypeQuality
all individuals: 1739
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2823
bin: 8.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
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variant carriers: 0

GenotypeQuality
all individuals: 2468
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 2
allele frequency: 2.351834430856068e-4
allele num: 8504
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9313
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9283
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6635
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 621
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47774
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 5.16e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.16e-1

FS
type: SiteQuality
SIO_000300: 1.196e0

VQSLOD
type: SiteQuality
SIO_000300: 1.17e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.44e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.7e-2

QD
type: SiteQuality
SIO_000300: 1.742e1

MQ
type: SiteQuality
SIO_000300: 5.914e1

DP
type: SiteQuality
SIO_000300: 3.119034e6

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2978
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variant carriers: 0

GenotypeQuality
all individuals: 2466
bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 611
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8373
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9301
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.181195369714151e-4
allele num: 8466
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47508
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6622
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.79e0

MQ
type: SiteQuality
SIO_000300: 6.091e1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 3.090695e6

QD
type: SiteQuality
SIO_000300: 2.884e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.03e-2

GenotypeQuality
all individuals: 2804
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2976
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1706
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1471
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47510
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6621
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9302
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8462
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 612
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.198178768272226e-4
allele num: 8346
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -4.406e-1

QD
type: SiteQuality
SIO_000300: 2.975e1

MQ
type: SiteQuality
SIO_000300: 5.89e1

DP
type: SiteQuality
SIO_000300: 3.0878e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.24e-2

GenotypeQuality
all individuals: 3718
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1469
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 360
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1694
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2969
bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47357
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 3.024345985180705e-4
allele num: 6613
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7939
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9298
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8446
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 603
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.28e0

VQSLOD
type: SiteQuality
SIO_000300: -3.867e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.26e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.370000000000001e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.98e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.73e0

QD
type: SiteQuality
SIO_000300: 3.175e1

MQ
type: SiteQuality
SIO_000300: 5.939e1

DP
type: SiteQuality
SIO_000300: 3.074266e6

GenotypeQuality
all individuals: 2465
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 168
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2798
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7806
bin: 6.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9297
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8433
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 3.027550711474417e-4
allele num: 6606
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47314
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 599
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7783
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.100000000000001e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.3e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.5e-3

VQSLOD
type: SiteQuality
SIO_000300: 1.28e0

FS
type: SiteQuality
SIO_000300: 1.761e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.45e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.06e-1

DP
type: SiteQuality
SIO_000300: 3.068029e6

MQ
type: SiteQuality
SIO_000300: 5.967e1

QD
type: SiteQuality
SIO_000300: 1.359e1

GenotypeQuality
all individuals: 2459
bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 661
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 561
bin: 3.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4526
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8371
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 594
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7216
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9292
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 4.247186239116585e-5
allele num: 47090
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.0e-2

QD
type: SiteQuality
SIO_000300: 1.88e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.586e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.19e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.7e-3

VQSLOD
type: SiteQuality
SIO_000300: -4.294e-1

FS
type: SiteQuality
SIO_000300: 4.405e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.8e-1

DP
type: SiteQuality
SIO_000300: 3.040699e6

GenotypeQuality
all individuals: 195
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3073
bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 954
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2120
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9289
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8127
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 615
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9353
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 2.211900022119e-4
allele num: 4521
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.107037505267594e-5
allele num: 47460
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.03e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.562e0

FS
type: SiteQuality
SIO_000300: 1.394e0

MQRankSum
type: SiteQuality
SIO_000300: -1.096e0

VQSLOD
type: SiteQuality
SIO_000300: -1.579e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.299999999999999e-3

DP
type: SiteQuality
SIO_000300: 1.894061e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.976e1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.919999999999999e-1

GenotypeQuality
all individuals: 28354
bin: 6.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1091
bin: 4.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2268
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 600
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3063
bin: 7.75e1
variant carriers: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8135
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47475
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9290
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 3.204101249599487e-4
allele num: 9363
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 616
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4521
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 3.112e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.24e0

FS
type: SiteQuality
SIO_000300: 7.538e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.68e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.9e0

DP
type: SiteQuality
SIO_000300: 1.894529e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.98e-2

MQRankSum
type: SiteQuality
SIO_000300: -3.59e-1

VQSLOD
type: SiteQuality
SIO_000300: -4.29e0

GenotypeQuality
all individuals: 2914
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1367
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 455
bin: 4.25e1
variant carriers: 1

GenotypeQuality
all individuals: 665
bin: 4.75e1
variant carriers: 2

GenotypeQuality
all individuals: 433
bin: 5.25e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4522
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8141
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.615508885298869e-3
allele num: 619
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.105617788259075e-5
allele num: 47492
num of homozygotes: 0

Latino
type: Population
allele count: 37
allele frequency: 3.983634797588286e-3
allele num: 9288
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.512630464377553e-4
allele num: 6611
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9440
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.96e-1

DP
type: SiteQuality
SIO_000300: 1.906671e6

QD
type: SiteQuality
SIO_000300: 1.358e1

FS
type: SiteQuality
SIO_000300: 2.743e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.4e-2

MQ
type: SiteQuality
SIO_000300: 5.953e1

MQRankSum
type: SiteQuality
SIO_000300: 1.42e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.56e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.11e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.71e-1

GenotypeQuality
all individuals: 7757
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2147
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 919
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1360
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7666
bin: 6.75e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.023436700440078e-4
allele num: 9771
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 620
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9300
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8252
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47651
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4522
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.99e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.7e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.935716e6

MQRankSum
type: SiteQuality
SIO_000300: 1.52e0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.0e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -1.142e0

QD
type: SiteQuality
SIO_000300: 1.334e1

GenotypeQuality
all individuals: 2007
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 918
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2857
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1360
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33720
bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4523
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8262
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9300
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6616
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9785
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.09819555182543e-5
allele num: 47660
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 621
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.89e-1

DP
type: SiteQuality
SIO_000300: 1.936482e6

FS
type: SiteQuality
SIO_000300: 2.668e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.94e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 1.52e0

VQSLOD
type: SiteQuality
SIO_000300: 2.8e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 1.37e-1

QD
type: SiteQuality
SIO_000300: 1.548e1

GenotypeQuality
all individuals: 116
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2009
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1361
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2851
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 918
bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.511258878645912e-4
allele num: 6617
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9302
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4524
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8297
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47676
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 625
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9864
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

DP
type: SiteQuality
SIO_000300: 1.940372e6

FS
type: SiteQuality
SIO_000300: 1.21e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.05e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.6e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.43e-1

VQSLOD
type: SiteQuality
SIO_000300: -8.47e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.39e-1

QD
type: SiteQuality
SIO_000300: 1.891e1

GenotypeQuality
all individuals: 7754
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 46
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7690
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34590
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 918
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4524
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 625
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8358
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.095689167382694e-5
allele num: 47717
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9946
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9303
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6617
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.7e0

DP
type: SiteQuality
SIO_000300: 1.944877e6

BaseQRankSum
type: SiteQuality
SIO_000300: -8.57e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.39e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -1.487e0

FS
type: SiteQuality
SIO_000300: 1.5099e1

MQRankSum
type: SiteQuality
SIO_000300: -1.329e0

VQSLOD
type: SiteQuality
SIO_000300: -1.813e0

MQ
type: SiteQuality
SIO_000300: 5.965e1

QD
type: SiteQuality
SIO_000300: 2.059e1