19-57905607-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57905607
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 57905607
    reference: chr 19
allele count: 1
allele frequency: 1.03639830859796e-5
allele num: 96488
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268133
  ensembl protein: ENSP00000472894
  ensembl transcript: ENST00000597658
  gene symbol: AC003002.4
  hgvsc: ENST00000597658.1:c.152-4191C>T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000469700
  ensembl transcript: ENST00000600442
  gene symbol: ZNF548
  hgvsc: ENST00000600442.1:c.*152+16C>T
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000473004
  ensembl transcript: ENST00000594693
  gene symbol: ZNF548
  hgvsc: ENST00000594693.1:c.24+16C>T
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000469598
  ensembl transcript: ENST00000594668
  gene symbol: ZNF548
  hgvsc: ENST00000594668.1:c.93+16C>T
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000471923
  ensembl transcript: ENST00000597047
  gene symbol: ZNF548
  hgvsc: ENST00000597047.1:c.175+16C>T
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269533
  ensembl transcript: ENST00000600421
  gene symbol: AC003002.6
  hgvsc: ENST00000600421.1:n.164+16C>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000468847
  ensembl transcript: ENST00000596282
  gene symbol: ZNF548
  hgvsc: ENST00000596282.1:c.24+16C>T
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000472618
  ensembl transcript: ENST00000602086
  gene symbol: ZNF548
  hgvsc: ENST00000602086.1:c.*55+16C>T
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000470982
  ensembl transcript: ENST00000600927
  gene symbol: ZNF548
  hgvsc: ENST00000600927.1:c.24+16C>T
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000379482
  ensembl transcript: ENST00000366197
  gene symbol: ZNF548
  hgvsc: ENST00000366197.5:c.16-2809C>T
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000473179
  ensembl transcript: ENST00000597400
  gene symbol: ZNF548
  hgvsc: ENST00000597400.1:c.51+16C>T
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268533
  ensembl protein: ENSP00000472152
  ensembl transcript: ENST00000597410
  gene symbol: AC004076.7
  hgvsc: ENST00000597410.1:c.41+16C>T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269533
  ensembl protein: ENSP00000472277
  ensembl transcript: ENST00000596400
  gene symbol: AC003002.6
  hgvsc: ENST00000596400.1:c.51+16C>T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000337555
  ensembl transcript: ENST00000336128
  gene symbol: ZNF548
  hgvsc: ENST00000336128.7:c.51+16C>T
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000469101
  ensembl transcript: ENST00000598895
  gene symbol: ZNF548
  hgvsc: ENST00000598895.1:c.51+16C>T
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000269533
  ensembl protein: ENSP00000471870
  ensembl transcript: ENST00000596617
  gene symbol: AC003002.6
  hgvsc: ENST00000596617.1:c.51+16C>T
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1556
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16891
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10532
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1038
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4862
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1231
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 998
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 904
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: Latino
population: East Asian
population: African
population: European (Finnish)
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: QD

19-57905610-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57905610
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 57905610
    reference: chr 19
allele count: 0
allele frequency: 0.0e0
allele num: 96414
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000379482
  ensembl transcript: ENST00000366197
  gene symbol: ZNF548
  hgvsc: ENST00000366197.5:c.16-2806A>G
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000470982
  ensembl transcript: ENST00000600927
  gene symbol: ZNF548
  hgvsc: ENST00000600927.1:c.24+19A>G
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000468847
  ensembl transcript: ENST00000596282
  gene symbol: ZNF548
  hgvsc: ENST00000596282.1:c.24+19A>G
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000472618
  ensembl transcript: ENST00000602086
  gene symbol: ZNF548
  hgvsc: ENST00000602086.1:c.*55+19A>G
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269533
  ensembl transcript: ENST00000600421
  gene symbol: AC003002.6
  hgvsc: ENST00000600421.1:n.164+19A>G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000469700
  ensembl transcript: ENST00000600442
  gene symbol: ZNF548
  hgvsc: ENST00000600442.1:c.*152+19A>G
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000473004
  ensembl transcript: ENST00000594693
  gene symbol: ZNF548
  hgvsc: ENST00000594693.1:c.24+19A>G
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000471923
  ensembl transcript: ENST00000597047
  gene symbol: ZNF548
  hgvsc: ENST00000597047.1:c.175+19A>G
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000469101
  ensembl transcript: ENST00000598895
  gene symbol: ZNF548
  hgvsc: ENST00000598895.1:c.51+19A>G
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000469598
  ensembl transcript: ENST00000594668
  gene symbol: ZNF548
  hgvsc: ENST00000594668.1:c.93+19A>G
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268533
  ensembl protein: ENSP00000472152
  ensembl transcript: ENST00000597410
  gene symbol: AC004076.7
  hgvsc: ENST00000597410.1:c.41+19A>G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269533
  ensembl protein: ENSP00000472277
  ensembl transcript: ENST00000596400
  gene symbol: AC003002.6
  hgvsc: ENST00000596400.1:c.51+19A>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000269533
  ensembl protein: ENSP00000471870
  ensembl transcript: ENST00000596617
  gene symbol: AC003002.6
  hgvsc: ENST00000596617.1:c.51+19A>G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268133
  ensembl protein: ENSP00000472894
  ensembl transcript: ENST00000597658
  gene symbol: AC003002.4
  hgvsc: ENST00000597658.1:c.152-4188A>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000473179
  ensembl transcript: ENST00000597400
  gene symbol: ZNF548
  hgvsc: ENST00000597400.1:c.51+19A>G
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000337555
  ensembl transcript: ENST00000336128
  gene symbol: ZNF548
  hgvsc: ENST00000336128.7:c.51+19A>G
  variant of: http://identifiers.org/hgnc/26561
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 979
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 770
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15945
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10520
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1628
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1037
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 550
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15603
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 998
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: European (Finnish)
population: Latino
population: Other
reference allele: A
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: DP

19-57905615-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57905615
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 57905615
    reference: chr 19
allele count: 1
allele frequency: 1.041276188096131e-5
allele num: 96036
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000470982
  ensembl transcript: ENST00000600927
  gene symbol: ZNF548
  hgvsc: ENST00000600927.1:c.24+24T>G
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000471923
  ensembl transcript: ENST00000597047
  gene symbol: ZNF548
  hgvsc: ENST00000597047.1:c.175+24T>G
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269533
  ensembl protein: ENSP00000472277
  ensembl transcript: ENST00000596400
  gene symbol: AC003002.6
  hgvsc: ENST00000596400.1:c.51+24T>G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000337555
  ensembl transcript: ENST00000336128
  gene symbol: ZNF548
  hgvsc: ENST00000336128.7:c.51+24T>G
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269533
  ensembl transcript: ENST00000600421
  gene symbol: AC003002.6
  hgvsc: ENST00000600421.1:n.164+24T>G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268533
  ensembl protein: ENSP00000472152
  ensembl transcript: ENST00000597410
  gene symbol: AC004076.7
  hgvsc: ENST00000597410.1:c.41+24T>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000473179
  ensembl transcript: ENST00000597400
  gene symbol: ZNF548
  hgvsc: ENST00000597400.1:c.51+24T>G
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000469598
  ensembl transcript: ENST00000594668
  gene symbol: ZNF548
  hgvsc: ENST00000594668.1:c.93+24T>G
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000379482
  ensembl transcript: ENST00000366197
  gene symbol: ZNF548
  hgvsc: ENST00000366197.5:c.16-2801T>G
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000469101
  ensembl transcript: ENST00000598895
  gene symbol: ZNF548
  hgvsc: ENST00000598895.1:c.51+24T>G
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000473004
  ensembl transcript: ENST00000594693
  gene symbol: ZNF548
  hgvsc: ENST00000594693.1:c.24+24T>G
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268133
  ensembl protein: ENSP00000472894
  ensembl transcript: ENST00000597658
  gene symbol: AC003002.4
  hgvsc: ENST00000597658.1:c.152-4183T>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000468847
  ensembl transcript: ENST00000596282
  gene symbol: ZNF548
  hgvsc: ENST00000596282.1:c.24+24T>G
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000269533
  ensembl protein: ENSP00000471870
  ensembl transcript: ENST00000596617
  gene symbol: AC003002.6
  hgvsc: ENST00000596617.1:c.51+24T>G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000469700
  ensembl transcript: ENST00000600442
  gene symbol: ZNF548
  hgvsc: ENST00000600442.1:c.*152+24T>G
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000472618
  ensembl transcript: ENST00000602086
  gene symbol: ZNF548
  hgvsc: ENST00000602086.1:c.*55+24T>G
  variant of: http://identifiers.org/hgnc/26561
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10493
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 903
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 979
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3898
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17561
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1151
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1807
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 770
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1037
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: South Asian
population: African
population: Other
population: Latino
population: European (Non-Finnish)
reference allele: T
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum

19-57905620-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57905620
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 57905620
    reference: chr 19
allele count: 47
allele frequency: 4.932622475966584e-4
allele num: 95284
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000470982
  ensembl transcript: ENST00000600927
  gene symbol: ZNF548
  hgvsc: ENST00000600927.1:c.24+29C>T
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269533
  ensembl protein: ENSP00000472277
  ensembl transcript: ENST00000596400
  gene symbol: AC003002.6
  hgvsc: ENST00000596400.1:c.51+29C>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000269533
  ensembl protein: ENSP00000471870
  ensembl transcript: ENST00000596617
  gene symbol: AC003002.6
  hgvsc: ENST00000596617.1:c.51+29C>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000468847
  ensembl transcript: ENST00000596282
  gene symbol: ZNF548
  hgvsc: ENST00000596282.1:c.24+29C>T
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000469700
  ensembl transcript: ENST00000600442
  gene symbol: ZNF548
  hgvsc: ENST00000600442.1:c.*152+29C>T
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000472618
  ensembl transcript: ENST00000602086
  gene symbol: ZNF548
  hgvsc: ENST00000602086.1:c.*55+29C>T
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000473004
  ensembl transcript: ENST00000594693
  gene symbol: ZNF548
  hgvsc: ENST00000594693.1:c.24+29C>T
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268133
  ensembl protein: ENSP00000472894
  ensembl transcript: ENST00000597658
  gene symbol: AC003002.4
  hgvsc: ENST00000597658.1:c.152-4178C>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269533
  ensembl transcript: ENST00000600421
  gene symbol: AC003002.6
  hgvsc: ENST00000600421.1:n.164+29C>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000469598
  ensembl transcript: ENST00000594668
  gene symbol: ZNF548
  hgvsc: ENST00000594668.1:c.93+29C>T
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000379482
  ensembl transcript: ENST00000366197
  gene symbol: ZNF548
  hgvsc: ENST00000366197.5:c.16-2796C>T
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000471923
  ensembl transcript: ENST00000597047
  gene symbol: ZNF548
  hgvsc: ENST00000597047.1:c.175+29C>T
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000337555
  ensembl transcript: ENST00000336128
  gene symbol: ZNF548
  hgvsc: ENST00000336128.7:c.51+29C>T
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268533
  ensembl protein: ENSP00000472152
  ensembl transcript: ENST00000597410
  gene symbol: AC004076.7
  hgvsc: ENST00000597410.1:c.41+29C>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000473179
  ensembl transcript: ENST00000597400
  gene symbol: ZNF548
  hgvsc: ENST00000597400.1:c.51+29C>T
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000469101
  ensembl transcript: ENST00000598895
  gene symbol: ZNF548
  hgvsc: ENST00000598895.1:c.51+29C>T
  variant of: http://identifiers.org/hgnc/26561
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9722
  bin: 2.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 901
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10521
  bin: 7.5e0
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 1933
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1136
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 770
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 997
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1035
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: African
population: Latino
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: QD

19-57905624-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57905624
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 57905624
    reference: chr 19
allele count: 1
allele frequency: 1.055186240371426e-5
allele num: 94770
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000473004
  ensembl transcript: ENST00000594693
  gene symbol: ZNF548
  hgvsc: ENST00000594693.1:c.24+33C>G
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000337555
  ensembl transcript: ENST00000336128
  gene symbol: ZNF548
  hgvsc: ENST00000336128.7:c.51+33C>G
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000469700
  ensembl transcript: ENST00000600442
  gene symbol: ZNF548
  hgvsc: ENST00000600442.1:c.*152+33C>G
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269533
  ensembl protein: ENSP00000472277
  ensembl transcript: ENST00000596400
  gene symbol: AC003002.6
  hgvsc: ENST00000596400.1:c.51+33C>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269533
  ensembl transcript: ENST00000600421
  gene symbol: AC003002.6
  hgvsc: ENST00000600421.1:n.164+33C>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000468847
  ensembl transcript: ENST00000596282
  gene symbol: ZNF548
  hgvsc: ENST00000596282.1:c.24+33C>G
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268533
  ensembl protein: ENSP00000472152
  ensembl transcript: ENST00000597410
  gene symbol: AC004076.7
  hgvsc: ENST00000597410.1:c.41+33C>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000269533
  ensembl protein: ENSP00000471870
  ensembl transcript: ENST00000596617
  gene symbol: AC003002.6
  hgvsc: ENST00000596617.1:c.51+33C>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000469598
  ensembl transcript: ENST00000594668
  gene symbol: ZNF548
  hgvsc: ENST00000594668.1:c.93+33C>G
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000379482
  ensembl transcript: ENST00000366197
  gene symbol: ZNF548
  hgvsc: ENST00000366197.5:c.16-2792C>G
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000473179
  ensembl transcript: ENST00000597400
  gene symbol: ZNF548
  hgvsc: ENST00000597400.1:c.51+33C>G
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000469101
  ensembl transcript: ENST00000598895
  gene symbol: ZNF548
  hgvsc: ENST00000598895.1:c.51+33C>G
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000470982
  ensembl transcript: ENST00000600927
  gene symbol: ZNF548
  hgvsc: ENST00000600927.1:c.24+33C>G
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268133
  ensembl protein: ENSP00000472894
  ensembl transcript: ENST00000597658
  gene symbol: AC003002.4
  hgvsc: ENST00000597658.1:c.152-4174C>G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000472618
  ensembl transcript: ENST00000602086
  gene symbol: ZNF548
  hgvsc: ENST00000602086.1:c.*55+33C>G
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000471923
  ensembl transcript: ENST00000597047
  gene symbol: ZNF548
  hgvsc: ENST00000597047.1:c.175+33C>G
  variant of: http://identifiers.org/hgnc/26561
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2080
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18704
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1031
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 770
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3104
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 550
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7732
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: African
population: Latino
population: European (Finnish)
population: Other
population: East Asian
reference allele: C
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff

19-57905627-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57905627
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 57905627
    reference: chr 19
allele count: 1
allele frequency: 1.059389367968303e-5
allele num: 94394
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000473004
  ensembl transcript: ENST00000594693
  gene symbol: ZNF548
  hgvsc: ENST00000594693.1:c.24+36G>C
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000470982
  ensembl transcript: ENST00000600927
  gene symbol: ZNF548
  hgvsc: ENST00000600927.1:c.24+36G>C
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000469101
  ensembl transcript: ENST00000598895
  gene symbol: ZNF548
  hgvsc: ENST00000598895.1:c.51+36G>C
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000469700
  ensembl transcript: ENST00000600442
  gene symbol: ZNF548
  hgvsc: ENST00000600442.1:c.*152+36G>C
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000269533
  ensembl protein: ENSP00000471870
  ensembl transcript: ENST00000596617
  gene symbol: AC003002.6
  hgvsc: ENST00000596617.1:c.51+36G>C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000469598
  ensembl transcript: ENST00000594668
  gene symbol: ZNF548
  hgvsc: ENST00000594668.1:c.93+36G>C
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000471923
  ensembl transcript: ENST00000597047
  gene symbol: ZNF548
  hgvsc: ENST00000597047.1:c.175+36G>C
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268533
  ensembl protein: ENSP00000472152
  ensembl transcript: ENST00000597410
  gene symbol: AC004076.7
  hgvsc: ENST00000597410.1:c.41+36G>C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000379482
  ensembl transcript: ENST00000366197
  gene symbol: ZNF548
  hgvsc: ENST00000366197.5:c.16-2789G>C
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269533
  ensembl protein: ENSP00000472277
  ensembl transcript: ENST00000596400
  gene symbol: AC003002.6
  hgvsc: ENST00000596400.1:c.51+36G>C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269533
  ensembl transcript: ENST00000600421
  gene symbol: AC003002.6
  hgvsc: ENST00000600421.1:n.164+36G>C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000468847
  ensembl transcript: ENST00000596282
  gene symbol: ZNF548
  hgvsc: ENST00000596282.1:c.24+36G>C
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268133
  ensembl protein: ENSP00000472894
  ensembl transcript: ENST00000597658
  gene symbol: AC003002.4
  hgvsc: ENST00000597658.1:c.152-4171G>C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000473179
  ensembl transcript: ENST00000597400
  gene symbol: ZNF548
  hgvsc: ENST00000597400.1:c.51+36G>C
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000337555
  ensembl transcript: ENST00000336128
  gene symbol: ZNF548
  hgvsc: ENST00000336128.7:c.51+36G>C
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000472618
  ensembl transcript: ENST00000602086
  gene symbol: ZNF548
  hgvsc: ENST00000602086.1:c.*55+36G>C
  variant of: http://identifiers.org/hgnc/26561
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 900
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2850
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1028
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 770
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10760
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18806
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: Other
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: South Asian
population: East Asian
reference allele: G
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: MQ

19-57905635-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57905635
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 57905635
    reference: chr 19
allele count: 3
allele frequency: 3.254007853005619e-5
allele num: 92194
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000468847
  ensembl transcript: ENST00000596282
  gene symbol: ZNF548
  hgvsc: ENST00000596282.1:c.24+44C>G
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269533
  ensembl transcript: ENST00000600421
  gene symbol: AC003002.6
  hgvsc: ENST00000600421.1:n.164+44C>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000469598
  ensembl transcript: ENST00000594668
  gene symbol: ZNF548
  hgvsc: ENST00000594668.1:c.93+44C>G
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000473004
  ensembl transcript: ENST00000594693
  gene symbol: ZNF548
  hgvsc: ENST00000594693.1:c.24+44C>G
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268133
  ensembl protein: ENSP00000472894
  ensembl transcript: ENST00000597658
  gene symbol: AC003002.4
  hgvsc: ENST00000597658.1:c.152-4163C>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000379482
  ensembl transcript: ENST00000366197
  gene symbol: ZNF548
  hgvsc: ENST00000366197.5:c.16-2781C>G
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000471923
  ensembl transcript: ENST00000597047
  gene symbol: ZNF548
  hgvsc: ENST00000597047.1:c.175+44C>G
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000269533
  ensembl protein: ENSP00000471870
  ensembl transcript: ENST00000596617
  gene symbol: AC003002.6
  hgvsc: ENST00000596617.1:c.51+44C>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000470982
  ensembl transcript: ENST00000600927
  gene symbol: ZNF548
  hgvsc: ENST00000600927.1:c.24+44C>G
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000469101
  ensembl transcript: ENST00000598895
  gene symbol: ZNF548
  hgvsc: ENST00000598895.1:c.51+44C>G
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000469700
  ensembl transcript: ENST00000600442
  gene symbol: ZNF548
  hgvsc: ENST00000600442.1:c.*152+44C>G
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268533
  ensembl protein: ENSP00000472152
  ensembl transcript: ENST00000597410
  gene symbol: AC004076.7
  hgvsc: ENST00000597410.1:c.41+44C>G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269533
  ensembl protein: ENSP00000472277
  ensembl transcript: ENST00000596400
  gene symbol: AC003002.6
  hgvsc: ENST00000596400.1:c.51+44C>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000473179
  ensembl transcript: ENST00000597400
  gene symbol: ZNF548
  hgvsc: ENST00000597400.1:c.51+44C>G
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000472618
  ensembl transcript: ENST00000602086
  gene symbol: ZNF548
  hgvsc: ENST00000602086.1:c.*55+44C>G
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000337555
  ensembl transcript: ENST00000336128
  gene symbol: ZNF548
  hgvsc: ENST00000336128.7:c.51+44C>G
  variant of: http://identifiers.org/hgnc/26561
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11610
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 550
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13252
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1029
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1010
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6227
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1969
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18219
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: Latino
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Other
reference allele: C
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum

19-57905640-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57905640
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 57905640
    reference: chr 19
allele count: 1
allele frequency: 1.109434632111476e-5
allele num: 90136
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000473004
  ensembl transcript: ENST00000594693
  gene symbol: ZNF548
  hgvsc: ENST00000594693.1:c.24+49T>C
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000470982
  ensembl transcript: ENST00000600927
  gene symbol: ZNF548
  hgvsc: ENST00000600927.1:c.24+49T>C
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268533
  ensembl protein: ENSP00000472152
  ensembl transcript: ENST00000597410
  gene symbol: AC004076.7
  hgvsc: ENST00000597410.1:c.41+49T>C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269533
  ensembl transcript: ENST00000600421
  gene symbol: AC003002.6
  hgvsc: ENST00000600421.1:n.164+49T>C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000472618
  ensembl transcript: ENST00000602086
  gene symbol: ZNF548
  hgvsc: ENST00000602086.1:c.*55+49T>C
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000337555
  ensembl transcript: ENST00000336128
  gene symbol: ZNF548
  hgvsc: ENST00000336128.7:c.51+49T>C
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000469700
  ensembl transcript: ENST00000600442
  gene symbol: ZNF548
  hgvsc: ENST00000600442.1:c.*152+49T>C
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000269533
  ensembl protein: ENSP00000471870
  ensembl transcript: ENST00000596617
  gene symbol: AC003002.6
  hgvsc: ENST00000596617.1:c.51+49T>C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000473179
  ensembl transcript: ENST00000597400
  gene symbol: ZNF548
  hgvsc: ENST00000597400.1:c.51+49T>C
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000379482
  ensembl transcript: ENST00000366197
  gene symbol: ZNF548
  hgvsc: ENST00000366197.5:c.16-2776T>C
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000469101
  ensembl transcript: ENST00000598895
  gene symbol: ZNF548
  hgvsc: ENST00000598895.1:c.51+49T>C
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269533
  ensembl protein: ENSP00000472277
  ensembl transcript: ENST00000596400
  gene symbol: AC003002.6
  hgvsc: ENST00000596400.1:c.51+49T>C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268133
  ensembl protein: ENSP00000472894
  ensembl transcript: ENST00000597658
  gene symbol: AC003002.4
  hgvsc: ENST00000597658.1:c.152-4158T>C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000469598
  ensembl transcript: ENST00000594668
  gene symbol: ZNF548
  hgvsc: ENST00000594668.1:c.93+49T>C
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000471923
  ensembl transcript: ENST00000597047
  gene symbol: ZNF548
  hgvsc: ENST00000597047.1:c.175+49T>C
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000468847
  ensembl transcript: ENST00000596282
  gene symbol: ZNF548
  hgvsc: ENST00000596282.1:c.24+49T>C
  variant of: http://identifiers.org/hgnc/26561
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13052
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 992
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2113
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 894
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1025
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 977
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18057
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Latino
population: African
population: South Asian
reference allele: T
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: DP
site quality: ReadPosRankSum

19-57908370-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57908370
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 57908370
    reference: chr 19
allele count: 4
allele frequency: 3.404776901993497e-5
allele num: 117482
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000269533
  ensembl protein: ENSP00000471870
  ensembl transcript: ENST00000596617
  gene symbol: AC003002.6
  hgvsc: ENST00000596617.1:c.52-46G>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269533
  ensembl transcript: ENST00000600421
  gene symbol: AC003002.6
  hgvsc: ENST00000600421.1:n.165-46G>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000188785
  ensembl transcript: ENST00000597576
  gene symbol: ZNF548
  hgvsc: ENST00000597576.1:n.98G>A
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000468847
  ensembl transcript: ENST00000596282
  gene symbol: ZNF548
  hgvsc: ENST00000596282.1:c.25-46G>A
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268533
  ensembl protein: ENSP00000472152
  ensembl transcript: ENST00000597410
  gene symbol: AC004076.7
  hgvsc: ENST00000597410.1:c.41+2779G>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000473179
  ensembl transcript: ENST00000597400
  gene symbol: ZNF548
  hgvsc: ENST00000597400.1:c.52-46G>A
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000469101
  ensembl transcript: ENST00000598895
  gene symbol: ZNF548
  hgvsc: ENST00000598895.1:c.52-46G>A
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000471923
  ensembl transcript: ENST00000597047
  gene symbol: ZNF548
  hgvsc: ENST00000597047.1:c.176-46G>A
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000469700
  ensembl transcript: ENST00000600442
  gene symbol: ZNF548
  hgvsc: ENST00000600442.1:c.*153-46G>A
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000470982
  ensembl transcript: ENST00000600927
  gene symbol: ZNF548
  hgvsc: ENST00000600927.1:c.25-46G>A
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000473004
  ensembl transcript: ENST00000594693
  gene symbol: ZNF548
  hgvsc: ENST00000594693.1:c.25-46G>A
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000337555
  ensembl transcript: ENST00000336128
  gene symbol: ZNF548
  hgvsc: ENST00000336128.7:c.52-46G>A
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000469598
  ensembl transcript: ENST00000594668
  gene symbol: ZNF548
  hgvsc: ENST00000594668.1:c.94-46G>A
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268133
  ensembl protein: ENSP00000472894
  ensembl transcript: ENST00000597658
  gene symbol: AC003002.4
  hgvsc: ENST00000597658.1:c.152-1428G>A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269533
  ensembl protein: ENSP00000472277
  ensembl transcript: ENST00000596400
  gene symbol: AC003002.6
  hgvsc: ENST00000596400.1:c.51+2779G>A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000472618
  ensembl transcript: ENST00000602086
  gene symbol: ZNF548
  hgvsc: ENST00000602086.1:c.*56-46G>A
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000379482
  ensembl transcript: ENST00000366197
  gene symbol: ZNF548
  hgvsc: ENST00000366197.5:c.16-46G>A
  variant of: http://identifiers.org/hgnc/26561
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4202
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3302
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1440
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2818
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1642
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15266
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3956
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4265
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: South Asian
population: Latino
population: Other
population: African
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP

19-57908371-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57908371
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 57908371
    reference: chr 19
allele count: 1
allele frequency: 8.51643672287515e-6
allele num: 117420
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000379482
  ensembl transcript: ENST00000366197
  gene symbol: ZNF548
  hgvsc: ENST00000366197.5:c.16-45C>T
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000469598
  ensembl transcript: ENST00000594668
  gene symbol: ZNF548
  hgvsc: ENST00000594668.1:c.94-45C>T
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000470982
  ensembl transcript: ENST00000600927
  gene symbol: ZNF548
  hgvsc: ENST00000600927.1:c.25-45C>T
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000473004
  ensembl transcript: ENST00000594693
  gene symbol: ZNF548
  hgvsc: ENST00000594693.1:c.25-45C>T
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269533
  ensembl transcript: ENST00000600421
  gene symbol: AC003002.6
  hgvsc: ENST00000600421.1:n.165-45C>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000269533
  ensembl protein: ENSP00000471870
  ensembl transcript: ENST00000596617
  gene symbol: AC003002.6
  hgvsc: ENST00000596617.1:c.52-45C>T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000472618
  ensembl transcript: ENST00000602086
  gene symbol: ZNF548
  hgvsc: ENST00000602086.1:c.*56-45C>T
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000471923
  ensembl transcript: ENST00000597047
  gene symbol: ZNF548
  hgvsc: ENST00000597047.1:c.176-45C>T
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000469101
  ensembl transcript: ENST00000598895
  gene symbol: ZNF548
  hgvsc: ENST00000598895.1:c.52-45C>T
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000469700
  ensembl transcript: ENST00000600442
  gene symbol: ZNF548
  hgvsc: ENST00000600442.1:c.*153-45C>T
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000337555
  ensembl transcript: ENST00000336128
  gene symbol: ZNF548
  hgvsc: ENST00000336128.7:c.52-45C>T
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268533
  ensembl protein: ENSP00000472152
  ensembl transcript: ENST00000597410
  gene symbol: AC004076.7
  hgvsc: ENST00000597410.1:c.41+2780C>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000188785
  ensembl transcript: ENST00000597576
  gene symbol: ZNF548
  hgvsc: ENST00000597576.1:n.99C>T
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268133
  ensembl protein: ENSP00000472894
  ensembl transcript: ENST00000597658
  gene symbol: AC003002.4
  hgvsc: ENST00000597658.1:c.152-1427C>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000473179
  ensembl transcript: ENST00000597400
  gene symbol: ZNF548
  hgvsc: ENST00000597400.1:c.52-45C>T
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269533
  ensembl protein: ENSP00000472277
  ensembl transcript: ENST00000596400
  gene symbol: AC003002.6
  hgvsc: ENST00000596400.1:c.51+2780C>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000468847
  ensembl transcript: ENST00000596282
  gene symbol: ZNF548
  hgvsc: ENST00000596282.1:c.25-45C>T
  variant of: http://identifiers.org/hgnc/26561
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1630
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1398
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1695
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2818
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4237
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4202
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3817
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: East Asian
population: Other
population: European (Finnish)
population: South Asian
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP

19-57908386-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57908386
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 57908386
    reference: chr 19
allele count: 1
allele frequency: 8.493867427717188e-6
allele num: 117732
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000471923
  ensembl transcript: ENST00000597047
  gene symbol: ZNF548
  hgvsc: ENST00000597047.1:c.176-30C>T
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000468847
  ensembl transcript: ENST00000596282
  gene symbol: ZNF548
  hgvsc: ENST00000596282.1:c.25-30C>T
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268133
  ensembl protein: ENSP00000472894
  ensembl transcript: ENST00000597658
  gene symbol: AC003002.4
  hgvsc: ENST00000597658.1:c.152-1412C>T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268533
  ensembl protein: ENSP00000472152
  ensembl transcript: ENST00000597410
  gene symbol: AC004076.7
  hgvsc: ENST00000597410.1:c.41+2795C>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000269533
  ensembl protein: ENSP00000471870
  ensembl transcript: ENST00000596617
  gene symbol: AC003002.6
  hgvsc: ENST00000596617.1:c.52-30C>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000469101
  ensembl transcript: ENST00000598895
  gene symbol: ZNF548
  hgvsc: ENST00000598895.1:c.52-30C>T
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000470982
  ensembl transcript: ENST00000600927
  gene symbol: ZNF548
  hgvsc: ENST00000600927.1:c.25-30C>T
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000473179
  ensembl transcript: ENST00000597400
  gene symbol: ZNF548
  hgvsc: ENST00000597400.1:c.52-30C>T
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000337555
  ensembl transcript: ENST00000336128
  gene symbol: ZNF548
  hgvsc: ENST00000336128.7:c.52-30C>T
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000472618
  ensembl transcript: ENST00000602086
  gene symbol: ZNF548
  hgvsc: ENST00000602086.1:c.*56-30C>T
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000188785
  ensembl transcript: ENST00000597576
  gene symbol: ZNF548
  hgvsc: ENST00000597576.1:n.114C>T
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000469598
  ensembl transcript: ENST00000594668
  gene symbol: ZNF548
  hgvsc: ENST00000594668.1:c.94-30C>T
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000473004
  ensembl transcript: ENST00000594693
  gene symbol: ZNF548
  hgvsc: ENST00000594693.1:c.25-30C>T
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269533
  ensembl protein: ENSP00000472277
  ensembl transcript: ENST00000596400
  gene symbol: AC003002.6
  hgvsc: ENST00000596400.1:c.51+2795C>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269533
  ensembl transcript: ENST00000600421
  gene symbol: AC003002.6
  hgvsc: ENST00000600421.1:n.165-30C>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000379482
  ensembl transcript: ENST00000366197
  gene symbol: ZNF548
  hgvsc: ENST00000366197.5:c.16-30C>T
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000469700
  ensembl transcript: ENST00000600442
  gene symbol: ZNF548
  hgvsc: ENST00000600442.1:c.*153-30C>T
  variant of: http://identifiers.org/hgnc/26561
canonical: false
consequence: non coding transcript exon
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 4265
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4202
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1518
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1434
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2818
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1681
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4237
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Other
population: Latino
reference allele: C
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum

19-57908388-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57908388
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 57908388
    reference: chr 19
allele count: 1
allele frequency: 8.48824378236143e-6
allele num: 117810
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000473004
  ensembl transcript: ENST00000594693
  gene symbol: ZNF548
  hgvsc: ENST00000594693.1:c.25-28T>C
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269533
  ensembl protein: ENSP00000472277
  ensembl transcript: ENST00000596400
  gene symbol: AC003002.6
  hgvsc: ENST00000596400.1:c.51+2797T>C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268533
  ensembl protein: ENSP00000472152
  ensembl transcript: ENST00000597410
  gene symbol: AC004076.7
  hgvsc: ENST00000597410.1:c.41+2797T>C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000469598
  ensembl transcript: ENST00000594668
  gene symbol: ZNF548
  hgvsc: ENST00000594668.1:c.94-28T>C
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000472618
  ensembl transcript: ENST00000602086
  gene symbol: ZNF548
  hgvsc: ENST00000602086.1:c.*56-28T>C
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000469700
  ensembl transcript: ENST00000600442
  gene symbol: ZNF548
  hgvsc: ENST00000600442.1:c.*153-28T>C
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000337555
  ensembl transcript: ENST00000336128
  gene symbol: ZNF548
  hgvsc: ENST00000336128.7:c.52-28T>C
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000469101
  ensembl transcript: ENST00000598895
  gene symbol: ZNF548
  hgvsc: ENST00000598895.1:c.52-28T>C
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000188785
  ensembl transcript: ENST00000597576
  gene symbol: ZNF548
  hgvsc: ENST00000597576.1:n.116T>C
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000468847
  ensembl transcript: ENST00000596282
  gene symbol: ZNF548
  hgvsc: ENST00000596282.1:c.25-28T>C
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268133
  ensembl protein: ENSP00000472894
  ensembl transcript: ENST00000597658
  gene symbol: AC003002.4
  hgvsc: ENST00000597658.1:c.152-1410T>C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000470982
  ensembl transcript: ENST00000600927
  gene symbol: ZNF548
  hgvsc: ENST00000600927.1:c.25-28T>C
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000269533
  ensembl protein: ENSP00000471870
  ensembl transcript: ENST00000596617
  gene symbol: AC003002.6
  hgvsc: ENST00000596617.1:c.52-28T>C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000379482
  ensembl transcript: ENST00000366197
  gene symbol: ZNF548
  hgvsc: ENST00000366197.5:c.16-28T>C
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269533
  ensembl transcript: ENST00000600421
  gene symbol: AC003002.6
  hgvsc: ENST00000600421.1:n.165-28T>C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000473179
  ensembl transcript: ENST00000597400
  gene symbol: ZNF548
  hgvsc: ENST00000597400.1:c.52-28T>C
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000471923
  ensembl transcript: ENST00000597047
  gene symbol: ZNF548
  hgvsc: ENST00000597047.1:c.176-28T>C
  variant of: http://identifiers.org/hgnc/26561
canonical: false
consequence: non coding transcript exon
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 2818
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1674
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1514
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4265
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1843
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1635
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: DP

19-57908390-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57908390
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 57908390
    reference: chr 19
allele count: 10
allele frequency: 8.48377901452423e-5
allele num: 117872
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000473004
  ensembl transcript: ENST00000594693
  gene symbol: ZNF548
  hgvsc: ENST00000594693.1:c.25-26T>C
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000337555
  ensembl transcript: ENST00000336128
  gene symbol: ZNF548
  hgvsc: ENST00000336128.7:c.52-26T>C
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000473179
  ensembl transcript: ENST00000597400
  gene symbol: ZNF548
  hgvsc: ENST00000597400.1:c.52-26T>C
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000472618
  ensembl transcript: ENST00000602086
  gene symbol: ZNF548
  hgvsc: ENST00000602086.1:c.*56-26T>C
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000468847
  ensembl transcript: ENST00000596282
  gene symbol: ZNF548
  hgvsc: ENST00000596282.1:c.25-26T>C
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000471923
  ensembl transcript: ENST00000597047
  gene symbol: ZNF548
  hgvsc: ENST00000597047.1:c.176-26T>C
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000188785
  ensembl transcript: ENST00000597576
  gene symbol: ZNF548
  hgvsc: ENST00000597576.1:n.118T>C
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268533
  ensembl protein: ENSP00000472152
  ensembl transcript: ENST00000597410
  gene symbol: AC004076.7
  hgvsc: ENST00000597410.1:c.41+2799T>C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268133
  ensembl protein: ENSP00000472894
  ensembl transcript: ENST00000597658
  gene symbol: AC003002.4
  hgvsc: ENST00000597658.1:c.152-1408T>C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000469598
  ensembl transcript: ENST00000594668
  gene symbol: ZNF548
  hgvsc: ENST00000594668.1:c.94-26T>C
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000469101
  ensembl transcript: ENST00000598895
  gene symbol: ZNF548
  hgvsc: ENST00000598895.1:c.52-26T>C
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000469700
  ensembl transcript: ENST00000600442
  gene symbol: ZNF548
  hgvsc: ENST00000600442.1:c.*153-26T>C
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000379482
  ensembl transcript: ENST00000366197
  gene symbol: ZNF548
  hgvsc: ENST00000366197.5:c.16-26T>C
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269533
  ensembl protein: ENSP00000472277
  ensembl transcript: ENST00000596400
  gene symbol: AC003002.6
  hgvsc: ENST00000596400.1:c.51+2799T>C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000269533
  ensembl protein: ENSP00000471870
  ensembl transcript: ENST00000596617
  gene symbol: AC003002.6
  hgvsc: ENST00000596617.1:c.52-26T>C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000470982
  ensembl transcript: ENST00000600927
  gene symbol: ZNF548
  hgvsc: ENST00000600927.1:c.25-26T>C
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269533
  ensembl transcript: ENST00000600421
  gene symbol: AC003002.6
  hgvsc: ENST00000600421.1:n.165-26T>C
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4265
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15265
  bin: 9.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 4237
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1761
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1651
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1642
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1397
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Latino
population: Other
population: South Asian
population: East Asian
reference allele: T
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: VQSLOD

19-57908391-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57908391
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 57908391
    reference: chr 19
allele count: 1
allele frequency: 8.479606546256254e-6
allele num: 117930
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000473004
  ensembl transcript: ENST00000594693
  gene symbol: ZNF548
  hgvsc: ENST00000594693.1:c.25-25G>A
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268133
  ensembl protein: ENSP00000472894
  ensembl transcript: ENST00000597658
  gene symbol: AC003002.4
  hgvsc: ENST00000597658.1:c.152-1407G>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000468847
  ensembl transcript: ENST00000596282
  gene symbol: ZNF548
  hgvsc: ENST00000596282.1:c.25-25G>A
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000473179
  ensembl transcript: ENST00000597400
  gene symbol: ZNF548
  hgvsc: ENST00000597400.1:c.52-25G>A
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000469700
  ensembl transcript: ENST00000600442
  gene symbol: ZNF548
  hgvsc: ENST00000600442.1:c.*153-25G>A
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000469598
  ensembl transcript: ENST00000594668
  gene symbol: ZNF548
  hgvsc: ENST00000594668.1:c.94-25G>A
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000269533
  ensembl protein: ENSP00000471870
  ensembl transcript: ENST00000596617
  gene symbol: AC003002.6
  hgvsc: ENST00000596617.1:c.52-25G>A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000471923
  ensembl transcript: ENST00000597047
  gene symbol: ZNF548
  hgvsc: ENST00000597047.1:c.176-25G>A
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000337555
  ensembl transcript: ENST00000336128
  gene symbol: ZNF548
  hgvsc: ENST00000336128.7:c.52-25G>A
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000472618
  ensembl transcript: ENST00000602086
  gene symbol: ZNF548
  hgvsc: ENST00000602086.1:c.*56-25G>A
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269533
  ensembl protein: ENSP00000472277
  ensembl transcript: ENST00000596400
  gene symbol: AC003002.6
  hgvsc: ENST00000596400.1:c.51+2800G>A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268533
  ensembl protein: ENSP00000472152
  ensembl transcript: ENST00000597410
  gene symbol: AC004076.7
  hgvsc: ENST00000597410.1:c.41+2800G>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269533
  ensembl transcript: ENST00000600421
  gene symbol: AC003002.6
  hgvsc: ENST00000600421.1:n.165-25G>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000188785
  ensembl transcript: ENST00000597576
  gene symbol: ZNF548
  hgvsc: ENST00000597576.1:n.119G>A
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000469101
  ensembl transcript: ENST00000598895
  gene symbol: ZNF548
  hgvsc: ENST00000598895.1:c.52-25G>A
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000379482
  ensembl transcript: ENST00000366197
  gene symbol: ZNF548
  hgvsc: ENST00000366197.5:c.16-25G>A
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000470982
  ensembl transcript: ENST00000600927
  gene symbol: ZNF548
  hgvsc: ENST00000600927.1:c.25-25G>A
  variant of: http://identifiers.org/hgnc/26561
canonical: false
consequence: non coding transcript exon
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 3818
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2818
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4203
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1638
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3956
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4237
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: DP

19-57908397-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57908397
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 57908397
    reference: chr 19
allele count: 2
allele frequency: 1.693050029628376e-5
allele num: 118130
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000471923
  ensembl transcript: ENST00000597047
  gene symbol: ZNF548
  hgvsc: ENST00000597047.1:c.176-19A>G
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269533
  ensembl transcript: ENST00000600421
  gene symbol: AC003002.6
  hgvsc: ENST00000600421.1:n.165-19A>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000473179
  ensembl transcript: ENST00000597400
  gene symbol: ZNF548
  hgvsc: ENST00000597400.1:c.52-19A>G
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000469598
  ensembl transcript: ENST00000594668
  gene symbol: ZNF548
  hgvsc: ENST00000594668.1:c.94-19A>G
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000269533
  ensembl protein: ENSP00000471870
  ensembl transcript: ENST00000596617
  gene symbol: AC003002.6
  hgvsc: ENST00000596617.1:c.52-19A>G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000472618
  ensembl transcript: ENST00000602086
  gene symbol: ZNF548
  hgvsc: ENST00000602086.1:c.*56-19A>G
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268533
  ensembl protein: ENSP00000472152
  ensembl transcript: ENST00000597410
  gene symbol: AC004076.7
  hgvsc: ENST00000597410.1:c.41+2806A>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000469101
  ensembl transcript: ENST00000598895
  gene symbol: ZNF548
  hgvsc: ENST00000598895.1:c.52-19A>G
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000188785
  ensembl transcript: ENST00000597576
  gene symbol: ZNF548
  hgvsc: ENST00000597576.1:n.125A>G
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000337555
  ensembl transcript: ENST00000336128
  gene symbol: ZNF548
  hgvsc: ENST00000336128.7:c.52-19A>G
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269533
  ensembl protein: ENSP00000472277
  ensembl transcript: ENST00000596400
  gene symbol: AC003002.6
  hgvsc: ENST00000596400.1:c.51+2806A>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000470982
  ensembl transcript: ENST00000600927
  gene symbol: ZNF548
  hgvsc: ENST00000600927.1:c.25-19A>G
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000469700
  ensembl transcript: ENST00000600442
  gene symbol: ZNF548
  hgvsc: ENST00000600442.1:c.*153-19A>G
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000473004
  ensembl transcript: ENST00000594693
  gene symbol: ZNF548
  hgvsc: ENST00000594693.1:c.25-19A>G
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000468847
  ensembl transcript: ENST00000596282
  gene symbol: ZNF548
  hgvsc: ENST00000596282.1:c.25-19A>G
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268133
  ensembl protein: ENSP00000472894
  ensembl transcript: ENST00000597658
  gene symbol: AC003002.4
  hgvsc: ENST00000597658.1:c.152-1401A>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000379482
  ensembl transcript: ENST00000366197
  gene symbol: ZNF548
  hgvsc: ENST00000366197.5:c.16-19A>G
  variant of: http://identifiers.org/hgnc/26561
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15257
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3345
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1643
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3303
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1552
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4237
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: African
population: South Asian
population: East Asian
reference allele: A
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP

19-57908407-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57908407
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 57908407
    reference: chr 19
allele count: 1
allele frequency: 8.427581789681268e-6
allele num: 118658
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000472618
  ensembl transcript: ENST00000602086
  gene symbol: ZNF548
  hgvsc: ENST00000602086.1:c.*56-9A>G
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000337555
  ensembl transcript: ENST00000336128
  gene symbol: ZNF548
  hgvsc: ENST00000336128.7:c.52-9A>G
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268533
  ensembl protein: ENSP00000472152
  ensembl transcript: ENST00000597410
  gene symbol: AC004076.7
  hgvsc: ENST00000597410.1:c.41+2816A>G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269533
  ensembl protein: ENSP00000472277
  ensembl transcript: ENST00000596400
  gene symbol: AC003002.6
  hgvsc: ENST00000596400.1:c.51+2816A>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000469598
  ensembl transcript: ENST00000594668
  gene symbol: ZNF548
  hgvsc: ENST00000594668.1:c.94-9A>G
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269533
  ensembl transcript: ENST00000600421
  gene symbol: AC003002.6
  hgvsc: ENST00000600421.1:n.165-9A>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000470982
  ensembl transcript: ENST00000600927
  gene symbol: ZNF548
  hgvsc: ENST00000600927.1:c.25-9A>G
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000469700
  ensembl transcript: ENST00000600442
  gene symbol: ZNF548
  hgvsc: ENST00000600442.1:c.*153-9A>G
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000269533
  ensembl protein: ENSP00000471870
  ensembl transcript: ENST00000596617
  gene symbol: AC003002.6
  hgvsc: ENST00000596617.1:c.52-9A>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000468847
  ensembl transcript: ENST00000596282
  gene symbol: ZNF548
  hgvsc: ENST00000596282.1:c.25-9A>G
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000188785
  ensembl transcript: ENST00000597576
  gene symbol: ZNF548
  hgvsc: ENST00000597576.1:n.135A>G
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000469101
  ensembl transcript: ENST00000598895
  gene symbol: ZNF548
  hgvsc: ENST00000598895.1:c.52-9A>G
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000379482
  ensembl transcript: ENST00000366197
  gene symbol: ZNF548
  hgvsc: ENST00000366197.5:c.16-9A>G
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000471923
  ensembl transcript: ENST00000597047
  gene symbol: ZNF548
  hgvsc: ENST00000597047.1:c.176-9A>G
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268133
  ensembl protein: ENSP00000472894
  ensembl transcript: ENST00000597658
  gene symbol: AC003002.4
  hgvsc: ENST00000597658.1:c.152-1391A>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000473004
  ensembl transcript: ENST00000594693
  gene symbol: ZNF548
  hgvsc: ENST00000594693.1:c.25-9A>G
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000473179
  ensembl transcript: ENST00000597400
  gene symbol: ZNF548
  hgvsc: ENST00000597400.1:c.52-9A>G
  variant of: http://identifiers.org/hgnc/26561
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1318
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1656
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3303
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1643
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1397
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2702
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2149
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: Other
population: European (Finnish)
population: African
population: South Asian
population: European (Non-Finnish)
population: East Asian
reference allele: A
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum

19-57908416-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57908416
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 57908416
    reference: chr 19
allele count: 2
allele frequency: 1.67937392939912e-5
allele num: 119092
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000469101
  ensembl transcript: ENST00000598895
  gene symbol: ZNF548
  hgvsc: ENST00000598895.1:c.52G>A
  hgvsp: ENSP00000469101.1:p.Gly18Ser
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000269533
  ensembl protein: ENSP00000471870
  ensembl transcript: ENST00000596617
  gene symbol: AC003002.6
  hgvsc: ENST00000596617.1:c.52G>A
  hgvsp: ENSP00000471870.1:p.Gly18Ser
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268133
  ensembl protein: ENSP00000472894
  ensembl transcript: ENST00000597658
  gene symbol: AC003002.4
  hgvsc: ENST00000597658.1:c.152-1382G>A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269533
  ensembl protein: ENSP00000472277
  ensembl transcript: ENST00000596400
  gene symbol: AC003002.6
  hgvsc: ENST00000596400.1:c.51+2825G>A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000472618
  ensembl transcript: ENST00000602086
  gene symbol: ZNF548
  hgvsc: ENST00000602086.1:c.*56G>A
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000337555
  ensembl transcript: ENST00000336128
  gene symbol: ZNF548
  hgvsc: ENST00000336128.7:c.52G>A
  hgvsp: ENSP00000337555.6:p.Gly18Ser
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000269533
  ensembl transcript: ENST00000600421
  gene symbol: AC003002.6
  hgvsc: ENST00000600421.1:n.165G>A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000379482
  ensembl transcript: ENST00000366197
  gene symbol: ZNF548
  hgvsc: ENST00000366197.5:c.16G>A
  hgvsp: ENSP00000379482.3:p.Gly6Ser
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000473179
  ensembl transcript: ENST00000597400
  gene symbol: ZNF548
  hgvsc: ENST00000597400.1:c.52G>A
  hgvsp: ENSP00000473179.1:p.Gly18Ser
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000469598
  ensembl transcript: ENST00000594668
  gene symbol: ZNF548
  hgvsc: ENST00000594668.1:c.94G>A
  hgvsp: ENSP00000469598.1:p.Gly32Ser
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000473004
  ensembl transcript: ENST00000594693
  gene symbol: ZNF548
  hgvsc: ENST00000594693.1:c.25G>A
  hgvsp: ENSP00000473004.1:p.Gly9Ser
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268533
  ensembl protein: ENSP00000472152
  ensembl transcript: ENST00000597410
  gene symbol: AC004076.7
  hgvsc: ENST00000597410.1:c.41+2825G>A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000469700
  ensembl transcript: ENST00000600442
  gene symbol: ZNF548
  hgvsc: ENST00000600442.1:c.*153G>A
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000471923
  ensembl transcript: ENST00000597047
  gene symbol: ZNF548
  hgvsc: ENST00000597047.1:c.176G>A
  hgvsp: ENSP00000471923.1:p.Gly59Glu
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000468847
  ensembl transcript: ENST00000596282
  gene symbol: ZNF548
  hgvsc: ENST00000596282.1:c.25G>A
  hgvsp: ENSP00000468847.1:p.Gly9Ser
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000188785
  ensembl transcript: ENST00000597576
  gene symbol: ZNF548
  hgvsc: ENST00000597576.1:n.144G>A
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000470982
  ensembl transcript: ENST00000600927
  gene symbol: ZNF548
  hgvsc: ENST00000600927.1:c.25G>A
  hgvsp: ENSP00000470982.1:p.Gly9Ser
  variant of: http://identifiers.org/hgnc/26561
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3303
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 914
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly18Ser
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Other
population: Latino
population: European (Finnish)
population: African
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: QD

19-57908418-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57908418
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 57908418
    reference: chr 19
allele count: 19
allele frequency: 1.59452155960993e-4
allele num: 119158
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000473179
  ensembl transcript: ENST00000597400
  gene symbol: ZNF548
  hgvsc: ENST00000597400.1:c.54C>T
  hgvsp: ENST00000597400.1:c.54C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000470982
  ensembl transcript: ENST00000600927
  gene symbol: ZNF548
  hgvsc: ENST00000600927.1:c.27C>T
  hgvsp: ENST00000600927.1:c.27C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000469700
  ensembl transcript: ENST00000600442
  gene symbol: ZNF548
  hgvsc: ENST00000600442.1:c.*155C>T
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000469101
  ensembl transcript: ENST00000598895
  gene symbol: ZNF548
  hgvsc: ENST00000598895.1:c.54C>T
  hgvsp: ENST00000598895.1:c.54C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000471923
  ensembl transcript: ENST00000597047
  gene symbol: ZNF548
  hgvsc: ENST00000597047.1:c.178C>T
  hgvsp: ENSP00000471923.1:p.Pro60Ser
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000269533
  ensembl protein: ENSP00000471870
  ensembl transcript: ENST00000596617
  gene symbol: AC003002.6
  hgvsc: ENST00000596617.1:c.54C>T
  hgvsp: ENST00000596617.1:c.54C>T(p.%3D)
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000379482
  ensembl transcript: ENST00000366197
  gene symbol: ZNF548
  hgvsc: ENST00000366197.5:c.18C>T
  hgvsp: ENST00000366197.5:c.18C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000337555
  ensembl transcript: ENST00000336128
  gene symbol: ZNF548
  hgvsc: ENST00000336128.7:c.54C>T
  hgvsp: ENST00000336128.7:c.54C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000269533
  ensembl transcript: ENST00000600421
  gene symbol: AC003002.6
  hgvsc: ENST00000600421.1:n.167C>T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000469598
  ensembl transcript: ENST00000594668
  gene symbol: ZNF548
  hgvsc: ENST00000594668.1:c.96C>T
  hgvsp: ENST00000594668.1:c.96C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000188785
  ensembl transcript: ENST00000597576
  gene symbol: ZNF548
  hgvsc: ENST00000597576.1:n.146C>T
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000468847
  ensembl transcript: ENST00000596282
  gene symbol: ZNF548
  hgvsc: ENST00000596282.1:c.27C>T
  hgvsp: ENST00000596282.1:c.27C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269533
  ensembl protein: ENSP00000472277
  ensembl transcript: ENST00000596400
  gene symbol: AC003002.6
  hgvsc: ENST00000596400.1:c.51+2827C>T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000472618
  ensembl transcript: ENST00000602086
  gene symbol: ZNF548
  hgvsc: ENST00000602086.1:c.*58C>T
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000473004
  ensembl transcript: ENST00000594693
  gene symbol: ZNF548
  hgvsc: ENST00000594693.1:c.27C>T
  hgvsp: ENST00000594693.1:c.27C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268133
  ensembl protein: ENSP00000472894
  ensembl transcript: ENST00000597658
  gene symbol: AC003002.4
  hgvsc: ENST00000597658.1:c.152-1380C>T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268533
  ensembl protein: ENSP00000472152
  ensembl transcript: ENST00000597410
  gene symbol: AC004076.7
  hgvsc: ENST00000597410.1:c.41+2827C>T
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2818
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2968
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3303
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro60Ser
num of homozygotes: 0
population: African
population: Latino
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: South Asian
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum

19-57908419-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57908419
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 57908419
    reference: chr 19
allele count: 1
allele frequency: 8.385744234800838e-6
allele num: 119250
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000269533
  ensembl protein: ENSP00000471870
  ensembl transcript: ENST00000596617
  gene symbol: AC003002.6
  hgvsc: ENST00000596617.1:c.55C>T
  hgvsp: ENSP00000471870.1:p.Arg19Cys
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000471923
  ensembl transcript: ENST00000597047
  gene symbol: ZNF548
  hgvsc: ENST00000597047.1:c.179C>T
  hgvsp: ENSP00000471923.1:p.Pro60Leu
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268533
  ensembl protein: ENSP00000472152
  ensembl transcript: ENST00000597410
  gene symbol: AC004076.7
  hgvsc: ENST00000597410.1:c.41+2828C>T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000469700
  ensembl transcript: ENST00000600442
  gene symbol: ZNF548
  hgvsc: ENST00000600442.1:c.*156C>T
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000269533
  ensembl transcript: ENST00000600421
  gene symbol: AC003002.6
  hgvsc: ENST00000600421.1:n.168C>T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000379482
  ensembl transcript: ENST00000366197
  gene symbol: ZNF548
  hgvsc: ENST00000366197.5:c.19C>T
  hgvsp: ENSP00000379482.3:p.Arg7Cys
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000473004
  ensembl transcript: ENST00000594693
  gene symbol: ZNF548
  hgvsc: ENST00000594693.1:c.28C>T
  hgvsp: ENSP00000473004.1:p.Arg10Cys
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000468847
  ensembl transcript: ENST00000596282
  gene symbol: ZNF548
  hgvsc: ENST00000596282.1:c.28C>T
  hgvsp: ENSP00000468847.1:p.Arg10Cys
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000470982
  ensembl transcript: ENST00000600927
  gene symbol: ZNF548
  hgvsc: ENST00000600927.1:c.28C>T
  hgvsp: ENSP00000470982.1:p.Arg10Cys
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000188785
  ensembl transcript: ENST00000597576
  gene symbol: ZNF548
  hgvsc: ENST00000597576.1:n.147C>T
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000469101
  ensembl transcript: ENST00000598895
  gene symbol: ZNF548
  hgvsc: ENST00000598895.1:c.55C>T
  hgvsp: ENSP00000469101.1:p.Arg19Cys
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000473179
  ensembl transcript: ENST00000597400
  gene symbol: ZNF548
  hgvsc: ENST00000597400.1:c.55C>T
  hgvsp: ENSP00000473179.1:p.Arg19Cys
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269533
  ensembl protein: ENSP00000472277
  ensembl transcript: ENST00000596400
  gene symbol: AC003002.6
  hgvsc: ENST00000596400.1:c.51+2828C>T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000472618
  ensembl transcript: ENST00000602086
  gene symbol: ZNF548
  hgvsc: ENST00000602086.1:c.*59C>T
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000337555
  ensembl transcript: ENST00000336128
  gene symbol: ZNF548
  hgvsc: ENST00000336128.7:c.55C>T
  hgvsp: ENSP00000337555.6:p.Arg19Cys
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000469598
  ensembl transcript: ENST00000594668
  gene symbol: ZNF548
  hgvsc: ENST00000594668.1:c.97C>T
  hgvsp: ENSP00000469598.1:p.Arg33Cys
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268133
  ensembl protein: ENSP00000472894
  ensembl transcript: ENST00000597658
  gene symbol: AC003002.4
  hgvsc: ENST00000597658.1:c.152-1379C>T
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 1399
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4266
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3820
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3025
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1024
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg19Cys
num of homozygotes: 0
population: Other
population: Latino
population: European (Finnish)
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff

19-57908420-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57908420
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 57908420
    reference: chr 19
allele count: 14
allele frequency: 1.172548953918826e-4
allele num: 119398
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000468847
  ensembl transcript: ENST00000596282
  gene symbol: ZNF548
  hgvsc: ENST00000596282.1:c.29G>A
  hgvsp: ENSP00000468847.1:p.Arg10His
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000269533
  ensembl transcript: ENST00000600421
  gene symbol: AC003002.6
  hgvsc: ENST00000600421.1:n.169G>A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000337555
  ensembl transcript: ENST00000336128
  gene symbol: ZNF548
  hgvsc: ENST00000336128.7:c.56G>A
  hgvsp: ENSP00000337555.6:p.Arg19His
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269533
  ensembl protein: ENSP00000472277
  ensembl transcript: ENST00000596400
  gene symbol: AC003002.6
  hgvsc: ENST00000596400.1:c.51+2829G>A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000269533
  ensembl protein: ENSP00000471870
  ensembl transcript: ENST00000596617
  gene symbol: AC003002.6
  hgvsc: ENST00000596617.1:c.56G>A
  hgvsp: ENSP00000471870.1:p.Arg19His
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000469101
  ensembl transcript: ENST00000598895
  gene symbol: ZNF548
  hgvsc: ENST00000598895.1:c.56G>A
  hgvsp: ENSP00000469101.1:p.Arg19His
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268533
  ensembl protein: ENSP00000472152
  ensembl transcript: ENST00000597410
  gene symbol: AC004076.7
  hgvsc: ENST00000597410.1:c.41+2829G>A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000469598
  ensembl transcript: ENST00000594668
  gene symbol: ZNF548
  hgvsc: ENST00000594668.1:c.98G>A
  hgvsp: ENSP00000469598.1:p.Arg33His
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000469700
  ensembl transcript: ENST00000600442
  gene symbol: ZNF548
  hgvsc: ENST00000600442.1:c.*157G>A
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000473179
  ensembl transcript: ENST00000597400
  gene symbol: ZNF548
  hgvsc: ENST00000597400.1:c.56G>A
  hgvsp: ENSP00000473179.1:p.Arg19His
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000379482
  ensembl transcript: ENST00000366197
  gene symbol: ZNF548
  hgvsc: ENST00000366197.5:c.20G>A
  hgvsp: ENSP00000379482.3:p.Arg7His
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268133
  ensembl protein: ENSP00000472894
  ensembl transcript: ENST00000597658
  gene symbol: AC003002.4
  hgvsc: ENST00000597658.1:c.152-1378G>A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000470982
  ensembl transcript: ENST00000600927
  gene symbol: ZNF548
  hgvsc: ENST00000600927.1:c.29G>A
  hgvsp: ENSP00000470982.1:p.Arg10His
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000473004
  ensembl transcript: ENST00000594693
  gene symbol: ZNF548
  hgvsc: ENST00000594693.1:c.29G>A
  hgvsp: ENSP00000473004.1:p.Arg10His
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000471923
  ensembl transcript: ENST00000597047
  gene symbol: ZNF548
  hgvsc: ENST00000597047.1:c.180G>A
  hgvsp: ENST00000597047.1:c.180G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000188785
  ensembl transcript: ENST00000597576
  gene symbol: ZNF548
  hgvsc: ENST00000597576.1:n.148G>A
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000472618
  ensembl transcript: ENST00000602086
  gene symbol: ZNF548
  hgvsc: ENST00000602086.1:c.*60G>A
  variant of: http://identifiers.org/hgnc/26561
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1643
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4239
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1694
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 779
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1399
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg19His
num of homozygotes: 0
population: African
population: Other
population: South Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
reference allele: G
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum

19-57908427-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57908427
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 57908427
    reference: chr 19
allele count: 1
allele frequency: 8.346130733791815e-6
allele num: 119816
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268533
  ensembl protein: ENSP00000472152
  ensembl transcript: ENST00000597410
  gene symbol: AC004076.7
  hgvsc: ENST00000597410.1:c.41+2836C>T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000469700
  ensembl transcript: ENST00000600442
  gene symbol: ZNF548
  hgvsc: ENST00000600442.1:c.*164C>T
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269533
  ensembl protein: ENSP00000472277
  ensembl transcript: ENST00000596400
  gene symbol: AC003002.6
  hgvsc: ENST00000596400.1:c.51+2836C>T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000379482
  ensembl transcript: ENST00000366197
  gene symbol: ZNF548
  hgvsc: ENST00000366197.5:c.27C>T
  hgvsp: ENST00000366197.5:c.27C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000470982
  ensembl transcript: ENST00000600927
  gene symbol: ZNF548
  hgvsc: ENST00000600927.1:c.36C>T
  hgvsp: ENST00000600927.1:c.36C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000471923
  ensembl transcript: ENST00000597047
  gene symbol: ZNF548
  hgvsc: ENST00000597047.1:c.187C>T
  hgvsp: ENSP00000471923.1:p.Leu63Phe
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000269533
  ensembl transcript: ENST00000600421
  gene symbol: AC003002.6
  hgvsc: ENST00000600421.1:n.176C>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000188785
  ensembl transcript: ENST00000597576
  gene symbol: ZNF548
  hgvsc: ENST00000597576.1:n.155C>T
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000473179
  ensembl transcript: ENST00000597400
  gene symbol: ZNF548
  hgvsc: ENST00000597400.1:c.63C>T
  hgvsp: ENST00000597400.1:c.63C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000469598
  ensembl transcript: ENST00000594668
  gene symbol: ZNF548
  hgvsc: ENST00000594668.1:c.105C>T
  hgvsp: ENST00000594668.1:c.105C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000469101
  ensembl transcript: ENST00000598895
  gene symbol: ZNF548
  hgvsc: ENST00000598895.1:c.63C>T
  hgvsp: ENST00000598895.1:c.63C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000473004
  ensembl transcript: ENST00000594693
  gene symbol: ZNF548
  hgvsc: ENST00000594693.1:c.36C>T
  hgvsp: ENST00000594693.1:c.36C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000468847
  ensembl transcript: ENST00000596282
  gene symbol: ZNF548
  hgvsc: ENST00000596282.1:c.36C>T
  hgvsp: ENST00000596282.1:c.36C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268133
  ensembl protein: ENSP00000472894
  ensembl transcript: ENST00000597658
  gene symbol: AC003002.4
  hgvsc: ENST00000597658.1:c.152-1371C>T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000472618
  ensembl transcript: ENST00000602086
  gene symbol: ZNF548
  hgvsc: ENST00000602086.1:c.*67C>T
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000337555
  ensembl transcript: ENST00000336128
  gene symbol: ZNF548
  hgvsc: ENST00000336128.7:c.63C>T
  hgvsp: ENST00000336128.7:c.63C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000269533
  ensembl protein: ENSP00000471870
  ensembl transcript: ENST00000596617
  gene symbol: AC003002.6
  hgvsc: ENST00000596617.1:c.63C>T
  hgvsp: ENST00000596617.1:c.63C>T(p.%3D)
canonical: false
consequence: missense
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 1644
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2149
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3821
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 765
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15236
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu63Phe
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: African
population: Other
population: East Asian
population: South Asian
reference allele: C
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum

19-57908433-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57908433
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 57908433
    reference: chr 19
allele count: 2
allele frequency: 1.665389867768044e-5
allele num: 120092
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000469101
  ensembl transcript: ENST00000598895
  gene symbol: ZNF548
  hgvsc: ENST00000598895.1:c.69G>A
  hgvsp: ENST00000598895.1:c.69G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268533
  ensembl protein: ENSP00000472152
  ensembl transcript: ENST00000597410
  gene symbol: AC004076.7
  hgvsc: ENST00000597410.1:c.41+2842G>A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000473179
  ensembl transcript: ENST00000597400
  gene symbol: ZNF548
  hgvsc: ENST00000597400.1:c.69G>A
  hgvsp: ENST00000597400.1:c.69G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000379482
  ensembl transcript: ENST00000366197
  gene symbol: ZNF548
  hgvsc: ENST00000366197.5:c.33G>A
  hgvsp: ENST00000366197.5:c.33G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000337555
  ensembl transcript: ENST00000336128
  gene symbol: ZNF548
  hgvsc: ENST00000336128.7:c.69G>A
  hgvsp: ENST00000336128.7:c.69G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000188785
  ensembl transcript: ENST00000597576
  gene symbol: ZNF548
  hgvsc: ENST00000597576.1:n.161G>A
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000269533
  ensembl protein: ENSP00000471870
  ensembl transcript: ENST00000596617
  gene symbol: AC003002.6
  hgvsc: ENST00000596617.1:c.69G>A
  hgvsp: ENST00000596617.1:c.69G>A(p.%3D)
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000469700
  ensembl transcript: ENST00000600442
  gene symbol: ZNF548
  hgvsc: ENST00000600442.1:c.*170G>A
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000468847
  ensembl transcript: ENST00000596282
  gene symbol: ZNF548
  hgvsc: ENST00000596282.1:c.42G>A
  hgvsp: ENST00000596282.1:c.42G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000471923
  ensembl transcript: ENST00000597047
  gene symbol: ZNF548
  hgvsc: ENST00000597047.1:c.*1G>A
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000469598
  ensembl transcript: ENST00000594668
  gene symbol: ZNF548
  hgvsc: ENST00000594668.1:c.111G>A
  hgvsp: ENST00000594668.1:c.111G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000472618
  ensembl transcript: ENST00000602086
  gene symbol: ZNF548
  hgvsc: ENST00000602086.1:c.*73G>A
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000473004
  ensembl transcript: ENST00000594693
  gene symbol: ZNF548
  hgvsc: ENST00000594693.1:c.42G>A
  hgvsp: ENST00000594693.1:c.42G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000470982
  ensembl transcript: ENST00000600927
  gene symbol: ZNF548
  hgvsc: ENST00000600927.1:c.42G>A
  hgvsp: ENST00000600927.1:c.42G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269533
  ensembl protein: ENSP00000472277
  ensembl transcript: ENST00000596400
  gene symbol: AC003002.6
  hgvsc: ENST00000596400.1:c.51+2842G>A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268133
  ensembl protein: ENSP00000472894
  ensembl transcript: ENST00000597658
  gene symbol: AC003002.4
  hgvsc: ENST00000597658.1:c.152-1365G>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000269533
  ensembl transcript: ENST00000600421
  gene symbol: AC003002.6
  hgvsc: ENST00000600421.1:n.182G>A
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 639
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4204
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3626
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2149
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu23Glu
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: South Asian
population: African
population: Latino
population: East Asian
reference allele: G
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: ClippingRankSum

19-57908436-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57908436
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 57908436
    reference: chr 19
allele count: 1
allele frequency: 8.317806760713336e-6
allele num: 120224
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000473179
  ensembl transcript: ENST00000597400
  gene symbol: ZNF548
  hgvsc: ENST00000597400.1:c.72C>T
  hgvsp: ENST00000597400.1:c.72C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000269533
  ensembl protein: ENSP00000471870
  ensembl transcript: ENST00000596617
  gene symbol: AC003002.6
  hgvsc: ENST00000596617.1:c.72C>T
  hgvsp: ENST00000596617.1:c.72C>T(p.%3D)
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000337555
  ensembl transcript: ENST00000336128
  gene symbol: ZNF548
  hgvsc: ENST00000336128.7:c.72C>T
  hgvsp: ENST00000336128.7:c.72C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000468847
  ensembl transcript: ENST00000596282
  gene symbol: ZNF548
  hgvsc: ENST00000596282.1:c.45C>T
  hgvsp: ENST00000596282.1:c.45C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269533
  ensembl protein: ENSP00000472277
  ensembl transcript: ENST00000596400
  gene symbol: AC003002.6
  hgvsc: ENST00000596400.1:c.51+2845C>T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000473004
  ensembl transcript: ENST00000594693
  gene symbol: ZNF548
  hgvsc: ENST00000594693.1:c.45C>T
  hgvsp: ENST00000594693.1:c.45C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000469598
  ensembl transcript: ENST00000594668
  gene symbol: ZNF548
  hgvsc: ENST00000594668.1:c.114C>T
  hgvsp: ENST00000594668.1:c.114C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000469101
  ensembl transcript: ENST00000598895
  gene symbol: ZNF548
  hgvsc: ENST00000598895.1:c.72C>T
  hgvsp: ENST00000598895.1:c.72C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000188785
  ensembl transcript: ENST00000597576
  gene symbol: ZNF548
  hgvsc: ENST00000597576.1:n.164C>T
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000472618
  ensembl transcript: ENST00000602086
  gene symbol: ZNF548
  hgvsc: ENST00000602086.1:c.*76C>T
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000470982
  ensembl transcript: ENST00000600927
  gene symbol: ZNF548
  hgvsc: ENST00000600927.1:c.45C>T
  hgvsp: ENST00000600927.1:c.45C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000379482
  ensembl transcript: ENST00000366197
  gene symbol: ZNF548
  hgvsc: ENST00000366197.5:c.36C>T
  hgvsp: ENST00000366197.5:c.36C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000471923
  ensembl transcript: ENST00000597047
  gene symbol: ZNF548
  hgvsc: ENST00000597047.1:c.*4C>T
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000469700
  ensembl transcript: ENST00000600442
  gene symbol: ZNF548
  hgvsc: ENST00000600442.1:c.*173C>T
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268133
  ensembl protein: ENSP00000472894
  ensembl transcript: ENST00000597658
  gene symbol: AC003002.4
  hgvsc: ENST00000597658.1:c.152-1362C>T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268533
  ensembl protein: ENSP00000472152
  ensembl transcript: ENST00000597410
  gene symbol: AC004076.7
  hgvsc: ENST00000597410.1:c.41+2845C>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000269533
  ensembl transcript: ENST00000600421
  gene symbol: AC003002.6
  hgvsc: ENST00000600421.1:n.185C>T
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3821
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4239
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1446
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asp24Asp
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: East Asian
population: Latino
population: European (Finnish)
population: South Asian
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: ReadPosRankSum

19-57908443-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57908443
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 57908443
    reference: chr 19
allele count: 1
allele frequency: 8.300270588821196e-6
allele num: 120478
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000470982
  ensembl transcript: ENST00000600927
  gene symbol: ZNF548
  hgvsc: ENST00000600927.1:c.52A>G
  hgvsp: ENSP00000470982.1:p.Ile18Val
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000469598
  ensembl transcript: ENST00000594668
  gene symbol: ZNF548
  hgvsc: ENST00000594668.1:c.121A>G
  hgvsp: ENSP00000469598.1:p.Ile41Val
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268533
  ensembl protein: ENSP00000472152
  ensembl transcript: ENST00000597410
  gene symbol: AC004076.7
  hgvsc: ENST00000597410.1:c.41+2852A>G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000379482
  ensembl transcript: ENST00000366197
  gene symbol: ZNF548
  hgvsc: ENST00000366197.5:c.43A>G
  hgvsp: ENSP00000379482.3:p.Ile15Val
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000473179
  ensembl transcript: ENST00000597400
  gene symbol: ZNF548
  hgvsc: ENST00000597400.1:c.79A>G
  hgvsp: ENSP00000473179.1:p.Ile27Val
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000469101
  ensembl transcript: ENST00000598895
  gene symbol: ZNF548
  hgvsc: ENST00000598895.1:c.79A>G
  hgvsp: ENSP00000469101.1:p.Ile27Val
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000188785
  ensembl transcript: ENST00000597576
  gene symbol: ZNF548
  hgvsc: ENST00000597576.1:n.171A>G
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000468847
  ensembl transcript: ENST00000596282
  gene symbol: ZNF548
  hgvsc: ENST00000596282.1:c.52A>G
  hgvsp: ENSP00000468847.1:p.Ile18Val
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000472618
  ensembl transcript: ENST00000602086
  gene symbol: ZNF548
  hgvsc: ENST00000602086.1:c.*83A>G
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000337555
  ensembl transcript: ENST00000336128
  gene symbol: ZNF548
  hgvsc: ENST00000336128.7:c.79A>G
  hgvsp: ENSP00000337555.6:p.Ile27Val
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000269533
  ensembl protein: ENSP00000471870
  ensembl transcript: ENST00000596617
  gene symbol: AC003002.6
  hgvsc: ENST00000596617.1:c.79A>G
  hgvsp: ENSP00000471870.1:p.Ile27Val
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269533
  ensembl protein: ENSP00000472277
  ensembl transcript: ENST00000596400
  gene symbol: AC003002.6
  hgvsc: ENST00000596400.1:c.51+2852A>G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000469700
  ensembl transcript: ENST00000600442
  gene symbol: ZNF548
  hgvsc: ENST00000600442.1:c.*180A>G
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000471923
  ensembl transcript: ENST00000597047
  gene symbol: ZNF548
  hgvsc: ENST00000597047.1:c.*11A>G
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000473004
  ensembl transcript: ENST00000594693
  gene symbol: ZNF548
  hgvsc: ENST00000594693.1:c.52A>G
  hgvsp: ENSP00000473004.1:p.Ile18Val
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268133
  ensembl protein: ENSP00000472894
  ensembl transcript: ENST00000597658
  gene symbol: AC003002.4
  hgvsc: ENST00000597658.1:c.152-1355A>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000269533
  ensembl transcript: ENST00000600421
  gene symbol: AC003002.6
  hgvsc: ENST00000600421.1:n.192A>G
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2818
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1644
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3962
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1400
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ile27Val
num of homozygotes: 0
population: South Asian
population: East Asian
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD

19-57908458-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57908458
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 57908458
    reference: chr 19
allele count: 1
allele frequency: 8.284455048546906e-6
allele num: 120708
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000469101
  ensembl transcript: ENST00000598895
  gene symbol: ZNF548
  hgvsc: ENST00000598895.1:c.94G>A
  hgvsp: ENSP00000469101.1:p.Glu32Lys
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000379482
  ensembl transcript: ENST00000366197
  gene symbol: ZNF548
  hgvsc: ENST00000366197.5:c.58G>A
  hgvsp: ENSP00000379482.3:p.Glu20Lys
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000473179
  ensembl transcript: ENST00000597400
  gene symbol: ZNF548
  hgvsc: ENST00000597400.1:c.94G>A
  hgvsp: ENSP00000473179.1:p.Glu32Lys
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000269533
  ensembl protein: ENSP00000471870
  ensembl transcript: ENST00000596617
  gene symbol: AC003002.6
  hgvsc: ENST00000596617.1:c.94G>A
  hgvsp: ENSP00000471870.1:p.Glu32Lys
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000470982
  ensembl transcript: ENST00000600927
  gene symbol: ZNF548
  hgvsc: ENST00000600927.1:c.67G>A
  hgvsp: ENSP00000470982.1:p.Glu23Lys
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000468847
  ensembl transcript: ENST00000596282
  gene symbol: ZNF548
  hgvsc: ENST00000596282.1:c.67G>A
  hgvsp: ENSP00000468847.1:p.Glu23Lys
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000471923
  ensembl transcript: ENST00000597047
  gene symbol: ZNF548
  hgvsc: ENST00000597047.1:c.*26G>A
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000337555
  ensembl transcript: ENST00000336128
  gene symbol: ZNF548
  hgvsc: ENST00000336128.7:c.94G>A
  hgvsp: ENSP00000337555.6:p.Glu32Lys
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000188785
  ensembl transcript: ENST00000597576
  gene symbol: ZNF548
  hgvsc: ENST00000597576.1:n.186G>A
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000473004
  ensembl transcript: ENST00000594693
  gene symbol: ZNF548
  hgvsc: ENST00000594693.1:c.67G>A
  hgvsp: ENSP00000473004.1:p.Glu23Lys
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000472618
  ensembl transcript: ENST00000602086
  gene symbol: ZNF548
  hgvsc: ENST00000602086.1:c.*98G>A
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000469700
  ensembl transcript: ENST00000600442
  gene symbol: ZNF548
  hgvsc: ENST00000600442.1:c.*195G>A
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000469598
  ensembl transcript: ENST00000594668
  gene symbol: ZNF548
  hgvsc: ENST00000594668.1:c.136G>A
  hgvsp: ENSP00000469598.1:p.Glu46Lys
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268133
  ensembl protein: ENSP00000472894
  ensembl transcript: ENST00000597658
  gene symbol: AC003002.4
  hgvsc: ENST00000597658.1:c.152-1340G>A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269533
  ensembl protein: ENSP00000472277
  ensembl transcript: ENST00000596400
  gene symbol: AC003002.6
  hgvsc: ENST00000596400.1:c.51+2867G>A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268533
  ensembl protein: ENSP00000472152
  ensembl transcript: ENST00000597410
  gene symbol: AC004076.7
  hgvsc: ENST00000597410.1:c.41+2867G>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000269533
  ensembl transcript: ENST00000600421
  gene symbol: AC003002.6
  hgvsc: ENST00000600421.1:n.207G>A
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3821
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2480
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1731
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3962
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3305
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15234
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Glu32Lys
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: South Asian
population: African
population: Latino
population: Other
reference allele: G
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: QD

19-57908469-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57908469
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 57908469
    reference: chr 19
allele count: 1
allele frequency: 8.278556881964336e-6
allele num: 120794
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268533
  ensembl protein: ENSP00000472152
  ensembl transcript: ENST00000597410
  gene symbol: AC004076.7
  hgvsc: ENST00000597410.1:c.41+2878G>A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000468847
  ensembl transcript: ENST00000596282
  gene symbol: ZNF548
  hgvsc: ENST00000596282.1:c.78G>A
  hgvsp: ENST00000596282.1:c.78G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268133
  ensembl protein: ENSP00000472894
  ensembl transcript: ENST00000597658
  gene symbol: AC003002.4
  hgvsc: ENST00000597658.1:c.152-1329G>A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000269533
  ensembl protein: ENSP00000471870
  ensembl transcript: ENST00000596617
  gene symbol: AC003002.6
  hgvsc: ENST00000596617.1:c.105G>A
  hgvsp: ENST00000596617.1:c.105G>A(p.%3D)
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000473179
  ensembl transcript: ENST00000597400
  gene symbol: ZNF548
  hgvsc: ENST00000597400.1:c.105G>A
  hgvsp: ENST00000597400.1:c.105G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000188785
  ensembl transcript: ENST00000597576
  gene symbol: ZNF548
  hgvsc: ENST00000597576.1:n.197G>A
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000469700
  ensembl transcript: ENST00000600442
  gene symbol: ZNF548
  hgvsc: ENST00000600442.1:c.*206G>A
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269533
  ensembl protein: ENSP00000472277
  ensembl transcript: ENST00000596400
  gene symbol: AC003002.6
  hgvsc: ENST00000596400.1:c.51+2878G>A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000470982
  ensembl transcript: ENST00000600927
  gene symbol: ZNF548
  hgvsc: ENST00000600927.1:c.78G>A
  hgvsp: ENST00000600927.1:c.78G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000469101
  ensembl transcript: ENST00000598895
  gene symbol: ZNF548
  hgvsc: ENST00000598895.1:c.105G>A
  hgvsp: ENST00000598895.1:c.105G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000469598
  ensembl transcript: ENST00000594668
  gene symbol: ZNF548
  hgvsc: ENST00000594668.1:c.147G>A
  hgvsp: ENST00000594668.1:c.147G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000471923
  ensembl transcript: ENST00000597047
  gene symbol: ZNF548
  hgvsc: ENST00000597047.1:c.*37G>A
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000269533
  ensembl transcript: ENST00000600421
  gene symbol: AC003002.6
  hgvsc: ENST00000600421.1:n.218G>A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000337555
  ensembl transcript: ENST00000336128
  gene symbol: ZNF548
  hgvsc: ENST00000336128.7:c.105G>A
  hgvsp: ENST00000336128.7:c.105G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000473004
  ensembl transcript: ENST00000594693
  gene symbol: ZNF548
  hgvsc: ENST00000594693.1:c.78G>A
  hgvsp: ENST00000594693.1:c.78G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000379482
  ensembl transcript: ENST00000366197
  gene symbol: ZNF548
  hgvsc: ENST00000366197.5:c.69G>A
  hgvsp: ENST00000366197.5:c.69G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000472618
  ensembl transcript: ENST00000602086
  gene symbol: ZNF548
  hgvsc: ENST00000602086.1:c.*109G>A
  variant of: http://identifiers.org/hgnc/26561
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2537
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2149
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1439
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3306
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly35Gly
num of homozygotes: 0
population: Other
population: European (Finnish)
population: African
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Latino
reference allele: G
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum

19-57908471-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57908471
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 57908471
    reference: chr 19
allele count: 1
allele frequency: 8.277734549608463e-6
allele num: 120806
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000473179
  ensembl transcript: ENST00000597400
  gene symbol: ZNF548
  hgvsc: ENST00000597400.1:c.107A>G
  hgvsp: ENSP00000473179.1:p.His36Arg
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000469598
  ensembl transcript: ENST00000594668
  gene symbol: ZNF548
  hgvsc: ENST00000594668.1:c.149A>G
  hgvsp: ENSP00000469598.1:p.His50Arg
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000469700
  ensembl transcript: ENST00000600442
  gene symbol: ZNF548
  hgvsc: ENST00000600442.1:c.*208A>G
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000337555
  ensembl transcript: ENST00000336128
  gene symbol: ZNF548
  hgvsc: ENST00000336128.7:c.107A>G
  hgvsp: ENSP00000337555.6:p.His36Arg
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000473004
  ensembl transcript: ENST00000594693
  gene symbol: ZNF548
  hgvsc: ENST00000594693.1:c.80A>G
  hgvsp: ENSP00000473004.1:p.His27Arg
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000269533
  ensembl protein: ENSP00000471870
  ensembl transcript: ENST00000596617
  gene symbol: AC003002.6
  hgvsc: ENST00000596617.1:c.107A>G
  hgvsp: ENSP00000471870.1:p.His36Arg
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000472618
  ensembl transcript: ENST00000602086
  gene symbol: ZNF548
  hgvsc: ENST00000602086.1:c.*111A>G
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000469101
  ensembl transcript: ENST00000598895
  gene symbol: ZNF548
  hgvsc: ENST00000598895.1:c.107A>G
  hgvsp: ENSP00000469101.1:p.His36Arg
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000468847
  ensembl transcript: ENST00000596282
  gene symbol: ZNF548
  hgvsc: ENST00000596282.1:c.80A>G
  hgvsp: ENSP00000468847.1:p.His27Arg
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000188785
  ensembl transcript: ENST00000597576
  gene symbol: ZNF548
  hgvsc: ENST00000597576.1:n.199A>G
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000470982
  ensembl transcript: ENST00000600927
  gene symbol: ZNF548
  hgvsc: ENST00000600927.1:c.80A>G
  hgvsp: ENSP00000470982.1:p.His27Arg
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000471923
  ensembl transcript: ENST00000597047
  gene symbol: ZNF548
  hgvsc: ENST00000597047.1:c.*39A>G
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000269533
  ensembl transcript: ENST00000600421
  gene symbol: AC003002.6
  hgvsc: ENST00000600421.1:n.220A>G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269533
  ensembl protein: ENSP00000472277
  ensembl transcript: ENST00000596400
  gene symbol: AC003002.6
  hgvsc: ENST00000596400.1:c.51+2880A>G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000379482
  ensembl transcript: ENST00000366197
  gene symbol: ZNF548
  hgvsc: ENST00000366197.5:c.71A>G
  hgvsp: ENSP00000379482.3:p.His24Arg
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268133
  ensembl protein: ENSP00000472894
  ensembl transcript: ENST00000597658
  gene symbol: AC003002.4
  hgvsc: ENST00000597658.1:c.152-1327A>G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268533
  ensembl protein: ENSP00000472152
  ensembl transcript: ENST00000597410
  gene symbol: AC004076.7
  hgvsc: ENST00000597410.1:c.41+2880A>G
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3821
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1644
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2149
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3962
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.His36Arg
num of homozygotes: 0
population: Latino
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: African
population: South Asian
reference allele: A
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: ReadPosRankSum

19-57908487-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57908487
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 57908487
    reference: chr 19
allele count: 1
allele frequency: 8.286789200656313e-6
allele num: 120674
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000337555
  ensembl transcript: ENST00000336128
  gene symbol: ZNF548
  hgvsc: ENST00000336128.7:c.123G>C
  hgvsp: ENSP00000337555.6:p.Gln41His
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000269533
  ensembl protein: ENSP00000471870
  ensembl transcript: ENST00000596617
  gene symbol: AC003002.6
  hgvsc: ENST00000596617.1:c.123G>C
  hgvsp: ENSP00000471870.1:p.Gln41His
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000269533
  ensembl transcript: ENST00000600421
  gene symbol: AC003002.6
  hgvsc: ENST00000600421.1:n.236G>C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269533
  ensembl protein: ENSP00000472277
  ensembl transcript: ENST00000596400
  gene symbol: AC003002.6
  hgvsc: ENST00000596400.1:c.51+2896G>C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268533
  ensembl protein: ENSP00000472152
  ensembl transcript: ENST00000597410
  gene symbol: AC004076.7
  hgvsc: ENST00000597410.1:c.41+2896G>C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000470982
  ensembl transcript: ENST00000600927
  gene symbol: ZNF548
  hgvsc: ENST00000600927.1:c.96G>C
  hgvsp: ENSP00000470982.1:p.Gln32His
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268133
  ensembl protein: ENSP00000472894
  ensembl transcript: ENST00000597658
  gene symbol: AC003002.4
  hgvsc: ENST00000597658.1:c.152-1311G>C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000469101
  ensembl transcript: ENST00000598895
  gene symbol: ZNF548
  hgvsc: ENST00000598895.1:c.123G>C
  hgvsp: ENSP00000469101.1:p.Gln41His
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000468847
  ensembl transcript: ENST00000596282
  gene symbol: ZNF548
  hgvsc: ENST00000596282.1:c.96G>C
  hgvsp: ENSP00000468847.1:p.Gln32His
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000379482
  ensembl transcript: ENST00000366197
  gene symbol: ZNF548
  hgvsc: ENST00000366197.5:c.87G>C
  hgvsp: ENSP00000379482.3:p.Gln29His
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000473004
  ensembl transcript: ENST00000594693
  gene symbol: ZNF548
  hgvsc: ENST00000594693.1:c.96G>C
  hgvsp: ENSP00000473004.1:p.Gln32His
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000473179
  ensembl transcript: ENST00000597400
  gene symbol: ZNF548
  hgvsc: ENST00000597400.1:c.123G>C
  hgvsp: ENSP00000473179.1:p.Gln41His
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000471923
  ensembl transcript: ENST00000597047
  gene symbol: ZNF548
  hgvsc: ENST00000597047.1:c.*55G>C
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000188785
  ensembl transcript: ENST00000597576
  gene symbol: ZNF548
  hgvsc: ENST00000597576.1:n.215G>C
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000469598
  ensembl transcript: ENST00000594668
  gene symbol: ZNF548
  hgvsc: ENST00000594668.1:c.165G>C
  hgvsp: ENSP00000469598.1:p.Gln55His
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000469700
  ensembl transcript: ENST00000600442
  gene symbol: ZNF548
  hgvsc: ENST00000600442.1:c.*224G>C
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000472618
  ensembl transcript: ENST00000602086
  gene symbol: ZNF548
  hgvsc: ENST00000602086.1:c.*127G>C
  variant of: http://identifiers.org/hgnc/26561
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2818
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1741
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1399
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4268
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gln41His
num of homozygotes: 0
population: Other
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
population: Latino
population: South Asian
reference allele: G
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum

19-57908500-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57908500
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 57908500
    reference: chr 19
allele count: 1
allele frequency: 8.318083513558476e-6
allele num: 120220
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269533
  ensembl protein: ENSP00000472277
  ensembl transcript: ENST00000596400
  gene symbol: AC003002.6
  hgvsc: ENST00000596400.1:c.51+2909C>T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000468847
  ensembl transcript: ENST00000596282
  gene symbol: ZNF548
  hgvsc: ENST00000596282.1:c.109C>T
  hgvsp: ENSP00000468847.1:p.Arg37Cys
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000337555
  ensembl transcript: ENST00000336128
  gene symbol: ZNF548
  hgvsc: ENST00000336128.7:c.136C>T
  hgvsp: ENSP00000337555.6:p.Arg46Cys
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268133
  ensembl protein: ENSP00000472894
  ensembl transcript: ENST00000597658
  gene symbol: AC003002.4
  hgvsc: ENST00000597658.1:c.152-1298C>T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000473179
  ensembl transcript: ENST00000597400
  gene symbol: ZNF548
  hgvsc: ENST00000597400.1:c.136C>T
  hgvsp: ENSP00000473179.1:p.Arg46Cys
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000470982
  ensembl transcript: ENST00000600927
  gene symbol: ZNF548
  hgvsc: ENST00000600927.1:c.109C>T
  hgvsp: ENSP00000470982.1:p.Arg37Cys
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000469101
  ensembl transcript: ENST00000598895
  gene symbol: ZNF548
  hgvsc: ENST00000598895.1:c.136C>T
  hgvsp: ENSP00000469101.1:p.Arg46Cys
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000473004
  ensembl transcript: ENST00000594693
  gene symbol: ZNF548
  hgvsc: ENST00000594693.1:c.109C>T
  hgvsp: ENSP00000473004.1:p.Arg37Cys
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000269533
  ensembl protein: ENSP00000471870
  ensembl transcript: ENST00000596617
  gene symbol: AC003002.6
  hgvsc: ENST00000596617.1:c.136C>T
  hgvsp: ENSP00000471870.1:p.Arg46Cys
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000379482
  ensembl transcript: ENST00000366197
  gene symbol: ZNF548
  hgvsc: ENST00000366197.5:c.100C>T
  hgvsp: ENSP00000379482.3:p.Arg34Cys
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000469598
  ensembl transcript: ENST00000594668
  gene symbol: ZNF548
  hgvsc: ENST00000594668.1:c.178C>T
  hgvsp: ENSP00000469598.1:p.Arg60Cys
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000469700
  ensembl transcript: ENST00000600442
  gene symbol: ZNF548
  hgvsc: ENST00000600442.1:c.*237C>T
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000471923
  ensembl transcript: ENST00000597047
  gene symbol: ZNF548
  hgvsc: ENST00000597047.1:c.*68C>T
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000188785
  ensembl transcript: ENST00000597576
  gene symbol: ZNF548
  hgvsc: ENST00000597576.1:n.228C>T
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000472618
  ensembl transcript: ENST00000602086
  gene symbol: ZNF548
  hgvsc: ENST00000602086.1:c.*140C>T
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268533
  ensembl protein: ENSP00000472152
  ensembl transcript: ENST00000597410
  gene symbol: AC004076.7
  hgvsc: ENST00000597410.1:c.41+2909C>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000269533
  ensembl transcript: ENST00000600421
  gene symbol: AC003002.6
  hgvsc: ENST00000600421.1:n.249C>T
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2818
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2149
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4268
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15233
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 513
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg46Cys
num of homozygotes: 0
population: Other
population: African
population: South Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: InbreedingCoeff

19-57908501-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57908501
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 57908501
    reference: chr 19
allele count: 3
allele frequency: 2.498417668809754e-5
allele num: 120076
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000337555
  ensembl transcript: ENST00000336128
  gene symbol: ZNF548
  hgvsc: ENST00000336128.7:c.137G>A
  hgvsp: ENSP00000337555.6:p.Arg46His
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000469101
  ensembl transcript: ENST00000598895
  gene symbol: ZNF548
  hgvsc: ENST00000598895.1:c.137G>A
  hgvsp: ENSP00000469101.1:p.Arg46His
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268533
  ensembl protein: ENSP00000472152
  ensembl transcript: ENST00000597410
  gene symbol: AC004076.7
  hgvsc: ENST00000597410.1:c.41+2910G>A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000472618
  ensembl transcript: ENST00000602086
  gene symbol: ZNF548
  hgvsc: ENST00000602086.1:c.*141G>A
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000188785
  ensembl transcript: ENST00000597576
  gene symbol: ZNF548
  hgvsc: ENST00000597576.1:n.229G>A
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000473179
  ensembl transcript: ENST00000597400
  gene symbol: ZNF548
  hgvsc: ENST00000597400.1:c.137G>A
  hgvsp: ENSP00000473179.1:p.Arg46His
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000269533
  ensembl protein: ENSP00000471870
  ensembl transcript: ENST00000596617
  gene symbol: AC003002.6
  hgvsc: ENST00000596617.1:c.137G>A
  hgvsp: ENSP00000471870.1:p.Arg46His
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000470982
  ensembl transcript: ENST00000600927
  gene symbol: ZNF548
  hgvsc: ENST00000600927.1:c.110G>A
  hgvsp: ENSP00000470982.1:p.Arg37His
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000471923
  ensembl transcript: ENST00000597047
  gene symbol: ZNF548
  hgvsc: ENST00000597047.1:c.*69G>A
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268133
  ensembl protein: ENSP00000472894
  ensembl transcript: ENST00000597658
  gene symbol: AC003002.4
  hgvsc: ENST00000597658.1:c.152-1297G>A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000469700
  ensembl transcript: ENST00000600442
  gene symbol: ZNF548
  hgvsc: ENST00000600442.1:c.*238G>A
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000473004
  ensembl transcript: ENST00000594693
  gene symbol: ZNF548
  hgvsc: ENST00000594693.1:c.110G>A
  hgvsp: ENSP00000473004.1:p.Arg37His
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269533
  ensembl protein: ENSP00000472277
  ensembl transcript: ENST00000596400
  gene symbol: AC003002.6
  hgvsc: ENST00000596400.1:c.51+2910G>A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000468847
  ensembl transcript: ENST00000596282
  gene symbol: ZNF548
  hgvsc: ENST00000596282.1:c.110G>A
  hgvsp: ENSP00000468847.1:p.Arg37His
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000269533
  ensembl transcript: ENST00000600421
  gene symbol: AC003002.6
  hgvsc: ENST00000600421.1:n.250G>A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000379482
  ensembl transcript: ENST00000366197
  gene symbol: ZNF548
  hgvsc: ENST00000366197.5:c.101G>A
  hgvsp: ENSP00000379482.3:p.Arg34His
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000469598
  ensembl transcript: ENST00000594668
  gene symbol: ZNF548
  hgvsc: ENST00000594668.1:c.179G>A
  hgvsp: ENSP00000469598.1:p.Arg60His
  variant of: http://identifiers.org/hgnc/26561
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4268
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3821
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 574
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4205
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2818
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 647
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg46His
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: East Asian
population: Latino
population: European (Finnish)
population: South Asian
population: African
reference allele: G
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD

19-57908509-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57908509
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 57908509
    reference: chr 19
allele count: 5
allele frequency: 4.186833246805446e-5
allele num: 119422
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268533
  ensembl protein: ENSP00000472152
  ensembl transcript: ENST00000597410
  gene symbol: AC004076.7
  hgvsc: ENST00000597410.1:c.41+2918A>G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000469598
  ensembl transcript: ENST00000594668
  gene symbol: ZNF548
  hgvsc: ENST00000594668.1:c.187A>G
  hgvsp: ENSP00000469598.1:p.Met63Val
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000470982
  ensembl transcript: ENST00000600927
  gene symbol: ZNF548
  hgvsc: ENST00000600927.1:c.118A>G
  hgvsp: ENSP00000470982.1:p.Met40Val
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000471923
  ensembl transcript: ENST00000597047
  gene symbol: ZNF548
  hgvsc: ENST00000597047.1:c.*77A>G
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000379482
  ensembl transcript: ENST00000366197
  gene symbol: ZNF548
  hgvsc: ENST00000366197.5:c.109A>G
  hgvsp: ENSP00000379482.3:p.Met37Val
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000473179
  ensembl transcript: ENST00000597400
  gene symbol: ZNF548
  hgvsc: ENST00000597400.1:c.145A>G
  hgvsp: ENSP00000473179.1:p.Met49Val
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000269533
  ensembl protein: ENSP00000471870
  ensembl transcript: ENST00000596617
  gene symbol: AC003002.6
  hgvsc: ENST00000596617.1:c.145A>G
  hgvsp: ENSP00000471870.1:p.Met49Val
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269533
  ensembl protein: ENSP00000472277
  ensembl transcript: ENST00000596400
  gene symbol: AC003002.6
  hgvsc: ENST00000596400.1:c.51+2918A>G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268133
  ensembl protein: ENSP00000472894
  ensembl transcript: ENST00000597658
  gene symbol: AC003002.4
  hgvsc: ENST00000597658.1:c.152-1289A>G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000468847
  ensembl transcript: ENST00000596282
  gene symbol: ZNF548
  hgvsc: ENST00000596282.1:c.118A>G
  hgvsp: ENSP00000468847.1:p.Met40Val
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000469101
  ensembl transcript: ENST00000598895
  gene symbol: ZNF548
  hgvsc: ENST00000598895.1:c.145A>G
  hgvsp: ENSP00000469101.1:p.Met49Val
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000337555
  ensembl transcript: ENST00000336128
  gene symbol: ZNF548
  hgvsc: ENST00000336128.7:c.145A>G
  hgvsp: ENSP00000337555.6:p.Met49Val
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000469700
  ensembl transcript: ENST00000600442
  gene symbol: ZNF548
  hgvsc: ENST00000600442.1:c.*246A>G
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000472618
  ensembl transcript: ENST00000602086
  gene symbol: ZNF548
  hgvsc: ENST00000602086.1:c.*149A>G
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000188785
  ensembl transcript: ENST00000597576
  gene symbol: ZNF548
  hgvsc: ENST00000597576.1:n.237A>G
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000269533
  ensembl transcript: ENST00000600421
  gene symbol: AC003002.6
  hgvsc: ENST00000600421.1:n.258A>G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000473004
  ensembl transcript: ENST00000594693
  gene symbol: ZNF548
  hgvsc: ENST00000594693.1:c.118A>G
  hgvsp: ENSP00000473004.1:p.Met40Val
  variant of: http://identifiers.org/hgnc/26561
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1733
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3821
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3307
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1438
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3963
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2619
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Met49Val
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: Latino
population: African
population: South Asian
population: European (Finnish)
population: East Asian
reference allele: A
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: DP

19-57908516-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57908516
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 57908516
    reference: chr 19
allele count: 1
allele frequency: 8.403361344537815e-6
allele num: 119000
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000470982
  ensembl transcript: ENST00000600927
  gene symbol: ZNF548
  hgvsc: ENST00000600927.1:c.125A>G
  hgvsp: ENSP00000470982.1:p.Glu42Gly
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268133
  ensembl protein: ENSP00000472894
  ensembl transcript: ENST00000597658
  gene symbol: AC003002.4
  hgvsc: ENST00000597658.1:c.152-1282A>G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000469598
  ensembl transcript: ENST00000594668
  gene symbol: ZNF548
  hgvsc: ENST00000594668.1:c.194A>G
  hgvsp: ENSP00000469598.1:p.Glu65Gly
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000269533
  ensembl protein: ENSP00000471870
  ensembl transcript: ENST00000596617
  gene symbol: AC003002.6
  hgvsc: ENST00000596617.1:c.152A>G
  hgvsp: ENSP00000471870.1:p.Glu51Gly
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000379482
  ensembl transcript: ENST00000366197
  gene symbol: ZNF548
  hgvsc: ENST00000366197.5:c.116A>G
  hgvsp: ENSP00000379482.3:p.Glu39Gly
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000337555
  ensembl transcript: ENST00000336128
  gene symbol: ZNF548
  hgvsc: ENST00000336128.7:c.152A>G
  hgvsp: ENSP00000337555.6:p.Glu51Gly
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000468847
  ensembl transcript: ENST00000596282
  gene symbol: ZNF548
  hgvsc: ENST00000596282.1:c.125A>G
  hgvsp: ENSP00000468847.1:p.Glu42Gly
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000469101
  ensembl transcript: ENST00000598895
  gene symbol: ZNF548
  hgvsc: ENST00000598895.1:c.152A>G
  hgvsp: ENSP00000469101.1:p.Glu51Gly
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000473179
  ensembl transcript: ENST00000597400
  gene symbol: ZNF548
  hgvsc: ENST00000597400.1:c.152A>G
  hgvsp: ENSP00000473179.1:p.Glu51Gly
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000469700
  ensembl transcript: ENST00000600442
  gene symbol: ZNF548
  hgvsc: ENST00000600442.1:c.*253A>G
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000471923
  ensembl transcript: ENST00000597047
  gene symbol: ZNF548
  hgvsc: ENST00000597047.1:c.*84A>G
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268533
  ensembl protein: ENSP00000472152
  ensembl transcript: ENST00000597410
  gene symbol: AC004076.7
  hgvsc: ENST00000597410.1:c.41+2925A>G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000473004
  ensembl transcript: ENST00000594693
  gene symbol: ZNF548
  hgvsc: ENST00000594693.1:c.125A>G
  hgvsp: ENSP00000473004.1:p.Glu42Gly
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000188785
  ensembl transcript: ENST00000597576
  gene symbol: ZNF548
  hgvsc: ENST00000597576.1:n.244A>G
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000269533
  ensembl transcript: ENST00000600421
  gene symbol: AC003002.6
  hgvsc: ENST00000600421.1:n.265A>G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000472618
  ensembl transcript: ENST00000602086
  gene symbol: ZNF548
  hgvsc: ENST00000602086.1:c.*156A>G
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269533
  ensembl protein: ENSP00000472277
  ensembl transcript: ENST00000596400
  gene symbol: AC003002.6
  hgvsc: ENST00000596400.1:c.51+2925A>G
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1439
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2331
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4206
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15227
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1157
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1079
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu51Gly
num of homozygotes: 0
population: East Asian
population: South Asian
population: Other
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
reference allele: A
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD

http://identifiers.org/exac.variant/19-57908538-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57908538
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 57908538
    reference: chr 19
allele count: 1
allele frequency: 8.576035127439883e-6
allele num: 116604
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000379482
  ensembl transcript: ENST00000366197
  gene symbol: ZNF548
  hgvsc: ENST00000366197.5:c.138A>C
  hgvsp: ENST00000366197.5:c.138A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269533
  ensembl protein: ENSP00000472277
  ensembl transcript: ENST00000596400
  gene symbol: AC003002.6
  hgvsc: ENST00000596400.1:c.51+2947A>C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000471923
  ensembl transcript: ENST00000597047
  gene symbol: ZNF548
  hgvsc: ENST00000597047.1:c.*106A>C
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268533
  ensembl protein: ENSP00000472152
  ensembl transcript: ENST00000597410
  gene symbol: AC004076.7
  hgvsc: ENST00000597410.1:c.41+2947A>C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000469598
  ensembl transcript: ENST00000594668
  gene symbol: ZNF548
  hgvsc: ENST00000594668.1:c.216A>C
  hgvsp: ENST00000594668.1:c.216A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268133
  ensembl protein: ENSP00000472894
  ensembl transcript: ENST00000597658
  gene symbol: AC003002.4
  hgvsc: ENST00000597658.1:c.152-1260A>C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000188785
  ensembl transcript: ENST00000597576
  gene symbol: ZNF548
  hgvsc: ENST00000597576.1:n.266A>C
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000473179
  ensembl transcript: ENST00000597400
  gene symbol: ZNF548
  hgvsc: ENST00000597400.1:c.174A>C
  hgvsp: ENST00000597400.1:c.174A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000472618
  ensembl transcript: ENST00000602086
  gene symbol: ZNF548
  hgvsc: ENST00000602086.1:c.*178A>C
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000469101
  ensembl transcript: ENST00000598895
  gene symbol: ZNF548
  hgvsc: ENST00000598895.1:c.174A>C
  hgvsp: ENST00000598895.1:c.174A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000468847
  ensembl transcript: ENST00000596282
  gene symbol: ZNF548
  hgvsc: ENST00000596282.1:c.147A>C
  hgvsp: ENST00000596282.1:c.147A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000269533
  ensembl transcript: ENST00000600421
  gene symbol: AC003002.6
  hgvsc: ENST00000600421.1:n.287A>C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000269533
  ensembl protein: ENSP00000471870
  ensembl transcript: ENST00000596617
  gene symbol: AC003002.6
  hgvsc: ENST00000596617.1:c.174A>C
  hgvsp: ENST00000596617.1:c.174A>C(p.%3D)
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000337555
  ensembl transcript: ENST00000336128
  gene symbol: ZNF548
  hgvsc: ENST00000336128.7:c.174A>C
  hgvsp: ENST00000336128.7:c.174A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000470982
  ensembl transcript: ENST00000600927
  gene symbol: ZNF548
  hgvsc: ENST00000600927.1:c.147A>C
  hgvsp: ENST00000600927.1:c.147A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/26561
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2150
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1957
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4240
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1652
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3307
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2818
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1438
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 866
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3346
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3963
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser58Ser
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: East Asian
population: African
reference allele: A
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: DP

19-57908545-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57908545
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 57908545
    reference: chr 19
allele count: 1
allele frequency: 8.6229197206174e-6
allele num: 115970
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000470982
  ensembl transcript: ENST00000600927
  gene symbol: ZNF548
  hgvsc: ENST00000600927.1:c.151+3A>G
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269533
  ensembl transcript: ENST00000600421
  gene symbol: AC003002.6
  hgvsc: ENST00000600421.1:n.291+3A>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl transcript: ENST00000597576
  gene symbol: ZNF548
  hgvsc: ENST00000597576.1:n.270+3A>G
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000468847
  ensembl transcript: ENST00000596282
  gene symbol: ZNF548
  hgvsc: ENST00000596282.1:c.151+3A>G
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000473179
  ensembl transcript: ENST00000597400
  gene symbol: ZNF548
  hgvsc: ENST00000597400.1:c.178+3A>G
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269533
  ensembl protein: ENSP00000471870
  ensembl transcript: ENST00000596617
  gene symbol: AC003002.6
  hgvsc: ENST00000596617.1:c.178+3A>G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000469101
  ensembl transcript: ENST00000598895
  gene symbol: ZNF548
  hgvsc: ENST00000598895.1:c.181A>G
  hgvsp: ENSP00000469101.1:p.Lys61Glu
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000469598
  ensembl transcript: ENST00000594668
  gene symbol: ZNF548
  hgvsc: ENST00000594668.1:c.220+3A>G
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268133
  ensembl protein: ENSP00000472894
  ensembl transcript: ENST00000597658
  gene symbol: AC003002.4
  hgvsc: ENST00000597658.1:c.152-1253A>G
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000472618
  ensembl transcript: ENST00000602086
  gene symbol: ZNF548
  hgvsc: ENST00000602086.1:c.*182+3A>G
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000379482
  ensembl transcript: ENST00000366197
  gene symbol: ZNF548
  hgvsc: ENST00000366197.5:c.142+3A>G
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000471923
  ensembl transcript: ENST00000597047
  gene symbol: ZNF548
  hgvsc: ENST00000597047.1:c.*110+3A>G
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268533
  ensembl protein: ENSP00000472152
  ensembl transcript: ENST00000597410
  gene symbol: AC004076.7
  hgvsc: ENST00000597410.1:c.41+2954A>G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269533
  ensembl protein: ENSP00000472277
  ensembl transcript: ENST00000596400
  gene symbol: AC003002.6
  hgvsc: ENST00000596400.1:c.51+2954A>G
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000337555
  ensembl transcript: ENST00000336128
  gene symbol: ZNF548
  hgvsc: ENST00000336128.7:c.178+3A>G
  variant of: http://identifiers.org/hgnc/26561
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3823
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4269
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1644
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2149
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1999
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2341
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2818
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 654
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Lys61Glu
num of homozygotes: 0
population: Other
population: East Asian
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: South Asian
reference allele: A
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: DP
site quality: ReadPosRankSum

19-57908551-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57908551
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 57908551
    reference: chr 19
allele count: 2
allele frequency: 1.73469564764862e-5
allele num: 115294
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000469598
  ensembl transcript: ENST00000594668
  gene symbol: ZNF548
  hgvsc: ENST00000594668.1:c.220+9C>T
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000469101
  ensembl transcript: ENST00000598895
  gene symbol: ZNF548
  hgvsc: ENST00000598895.1:c.187C>T
  hgvsp: ENSP00000469101.1:p.Leu63Phe
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000269533
  ensembl protein: ENSP00000471870
  ensembl transcript: ENST00000596617
  gene symbol: AC003002.6
  hgvsc: ENST00000596617.1:c.178+9C>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000470982
  ensembl transcript: ENST00000600927
  gene symbol: ZNF548
  hgvsc: ENST00000600927.1:c.151+9C>T
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268133
  ensembl protein: ENSP00000472894
  ensembl transcript: ENST00000597658
  gene symbol: AC003002.4
  hgvsc: ENST00000597658.1:c.152-1247C>T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268533
  ensembl protein: ENSP00000472152
  ensembl transcript: ENST00000597410
  gene symbol: AC004076.7
  hgvsc: ENST00000597410.1:c.41+2960C>T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000337555
  ensembl transcript: ENST00000336128
  gene symbol: ZNF548
  hgvsc: ENST00000336128.7:c.178+9C>T
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000379482
  ensembl transcript: ENST00000366197
  gene symbol: ZNF548
  hgvsc: ENST00000366197.5:c.142+9C>T
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000471923
  ensembl transcript: ENST00000597047
  gene symbol: ZNF548
  hgvsc: ENST00000597047.1:c.*110+9C>T
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000472618
  ensembl transcript: ENST00000602086
  gene symbol: ZNF548
  hgvsc: ENST00000602086.1:c.*182+9C>T
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269533
  ensembl protein: ENSP00000472277
  ensembl transcript: ENST00000596400
  gene symbol: AC003002.6
  hgvsc: ENST00000596400.1:c.51+2960C>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl transcript: ENST00000597576
  gene symbol: ZNF548
  hgvsc: ENST00000597576.1:n.270+9C>T
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269533
  ensembl transcript: ENST00000600421
  gene symbol: AC003002.6
  hgvsc: ENST00000600421.1:n.291+9C>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000473179
  ensembl transcript: ENST00000597400
  gene symbol: ZNF548
  hgvsc: ENST00000597400.1:c.178+9C>T
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000468847
  ensembl transcript: ENST00000596282
  gene symbol: ZNF548
  hgvsc: ENST00000596282.1:c.151+9C>T
  variant of: http://identifiers.org/hgnc/26561
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2149
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 543
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2479
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3307
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1911
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3346
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1649
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1439
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1485
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1399
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4240
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu63Phe
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: African
population: South Asian
reference allele: C
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD

http://identifiers.org/exac.variant/19-57908554-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57908554
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 57908554
    reference: chr 19
allele count: 1
allele frequency: 8.701099819017123e-6
allele num: 114928
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000468847
  ensembl transcript: ENST00000596282
  gene symbol: ZNF548
  hgvsc: ENST00000596282.1:c.151+12A>C
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl transcript: ENST00000597576
  gene symbol: ZNF548
  hgvsc: ENST00000597576.1:n.270+12A>C
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000469101
  ensembl transcript: ENST00000598895
  gene symbol: ZNF548
  hgvsc: ENST00000598895.1:c.190A>C
  hgvsp: ENSP00000469101.1:p.Thr64Pro
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000469598
  ensembl transcript: ENST00000594668
  gene symbol: ZNF548
  hgvsc: ENST00000594668.1:c.220+12A>C
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268133
  ensembl protein: ENSP00000472894
  ensembl transcript: ENST00000597658
  gene symbol: AC003002.4
  hgvsc: ENST00000597658.1:c.152-1244A>C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000269533
  ensembl protein: ENSP00000471870
  ensembl transcript: ENST00000596617
  gene symbol: AC003002.6
  hgvsc: ENST00000596617.1:c.178+12A>C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000472618
  ensembl transcript: ENST00000602086
  gene symbol: ZNF548
  hgvsc: ENST00000602086.1:c.*182+12A>C
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269533
  ensembl protein: ENSP00000472277
  ensembl transcript: ENST00000596400
  gene symbol: AC003002.6
  hgvsc: ENST00000596400.1:c.51+2963A>C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268533
  ensembl protein: ENSP00000472152
  ensembl transcript: ENST00000597410
  gene symbol: AC004076.7
  hgvsc: ENST00000597410.1:c.41+2963A>C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269533
  ensembl transcript: ENST00000600421
  gene symbol: AC003002.6
  hgvsc: ENST00000600421.1:n.291+12A>C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000379482
  ensembl transcript: ENST00000366197
  gene symbol: ZNF548
  hgvsc: ENST00000366197.5:c.142+12A>C
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000473179
  ensembl transcript: ENST00000597400
  gene symbol: ZNF548
  hgvsc: ENST00000597400.1:c.178+12A>C
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000470982
  ensembl transcript: ENST00000600927
  gene symbol: ZNF548
  hgvsc: ENST00000600927.1:c.151+12A>C
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000337555
  ensembl transcript: ENST00000336128
  gene symbol: ZNF548
  hgvsc: ENST00000336128.7:c.178+12A>C
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000471923
  ensembl transcript: ENST00000597047
  gene symbol: ZNF548
  hgvsc: ENST00000597047.1:c.*110+12A>C
  variant of: http://identifiers.org/hgnc/26561
canonical: false
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 2818
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3307
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1644
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2149
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4269
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1438
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1399
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2547
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1858
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 507
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4240
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr64Pro
num of homozygotes: 0
population: African
population: East Asian
population: South Asian
population: Other
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
reference allele: A
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum

19-57908560-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57908560
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 57908560
    reference: chr 19
allele count: 5
allele frequency: 4.367651426474956e-5
allele num: 114478
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000469101
  ensembl transcript: ENST00000598895
  gene symbol: ZNF548
  hgvsc: ENST00000598895.1:c.196G>T
  hgvsp: ENSP00000469101.1:p.Ala66Ser
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000468847
  ensembl transcript: ENST00000596282
  gene symbol: ZNF548
  hgvsc: ENST00000596282.1:c.151+18G>T
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000470982
  ensembl transcript: ENST00000600927
  gene symbol: ZNF548
  hgvsc: ENST00000600927.1:c.151+18G>T
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000469598
  ensembl transcript: ENST00000594668
  gene symbol: ZNF548
  hgvsc: ENST00000594668.1:c.220+18G>T
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268533
  ensembl protein: ENSP00000472152
  ensembl transcript: ENST00000597410
  gene symbol: AC004076.7
  hgvsc: ENST00000597410.1:c.41+2969G>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl transcript: ENST00000597576
  gene symbol: ZNF548
  hgvsc: ENST00000597576.1:n.270+18G>T
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000379482
  ensembl transcript: ENST00000366197
  gene symbol: ZNF548
  hgvsc: ENST00000366197.5:c.142+18G>T
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269533
  ensembl protein: ENSP00000472277
  ensembl transcript: ENST00000596400
  gene symbol: AC003002.6
  hgvsc: ENST00000596400.1:c.51+2969G>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000473179
  ensembl transcript: ENST00000597400
  gene symbol: ZNF548
  hgvsc: ENST00000597400.1:c.178+18G>T
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000471923
  ensembl transcript: ENST00000597047
  gene symbol: ZNF548
  hgvsc: ENST00000597047.1:c.*110+18G>T
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000337555
  ensembl transcript: ENST00000336128
  gene symbol: ZNF548
  hgvsc: ENST00000336128.7:c.178+18G>T
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269533
  ensembl transcript: ENST00000600421
  gene symbol: AC003002.6
  hgvsc: ENST00000600421.1:n.291+18G>T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268133
  ensembl protein: ENSP00000472894
  ensembl transcript: ENST00000597658
  gene symbol: AC003002.4
  hgvsc: ENST00000597658.1:c.152-1238G>T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000472618
  ensembl transcript: ENST00000602086
  gene symbol: ZNF548
  hgvsc: ENST00000602086.1:c.*182+18G>T
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000269533
  ensembl protein: ENSP00000471870
  ensembl transcript: ENST00000596617
  gene symbol: AC003002.6
  hgvsc: ENST00000596617.1:c.178+18G>T
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3346
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4240
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4269
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 705
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2819
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3964
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1647
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2628
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15223
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1644
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1399
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4206
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala66Ser
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: DP

19-57908574-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57908574
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 57908574
    reference: chr 19
allele count: 1
allele frequency: 8.867449366864115e-6
allele num: 112772
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000470982
  ensembl transcript: ENST00000600927
  gene symbol: ZNF548
  hgvsc: ENST00000600927.1:c.151+32G>A
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268133
  ensembl protein: ENSP00000472894
  ensembl transcript: ENST00000597658
  gene symbol: AC003002.4
  hgvsc: ENST00000597658.1:c.152-1224G>A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000337555
  ensembl transcript: ENST00000336128
  gene symbol: ZNF548
  hgvsc: ENST00000336128.7:c.178+32G>A
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000471923
  ensembl transcript: ENST00000597047
  gene symbol: ZNF548
  hgvsc: ENST00000597047.1:c.*110+32G>A
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000469598
  ensembl transcript: ENST00000594668
  gene symbol: ZNF548
  hgvsc: ENST00000594668.1:c.220+32G>A
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000379482
  ensembl transcript: ENST00000366197
  gene symbol: ZNF548
  hgvsc: ENST00000366197.5:c.142+32G>A
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000469101
  ensembl transcript: ENST00000598895
  gene symbol: ZNF548
  hgvsc: ENST00000598895.1:c.210G>A
  hgvsp: ENST00000598895.1:c.210G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl transcript: ENST00000597576
  gene symbol: ZNF548
  hgvsc: ENST00000597576.1:n.270+32G>A
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268533
  ensembl protein: ENSP00000472152
  ensembl transcript: ENST00000597410
  gene symbol: AC004076.7
  hgvsc: ENST00000597410.1:c.41+2983G>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000473179
  ensembl transcript: ENST00000597400
  gene symbol: ZNF548
  hgvsc: ENST00000597400.1:c.178+32G>A
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000269533
  ensembl protein: ENSP00000471870
  ensembl transcript: ENST00000596617
  gene symbol: AC003002.6
  hgvsc: ENST00000596617.1:c.178+32G>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000468847
  ensembl transcript: ENST00000596282
  gene symbol: ZNF548
  hgvsc: ENST00000596282.1:c.151+32G>A
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269533
  ensembl protein: ENSP00000472277
  ensembl transcript: ENST00000596400
  gene symbol: AC003002.6
  hgvsc: ENST00000596400.1:c.51+2983G>A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000472618
  ensembl transcript: ENST00000602086
  gene symbol: ZNF548
  hgvsc: ENST00000602086.1:c.*182+32G>A
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269533
  ensembl transcript: ENST00000600421
  gene symbol: AC003002.6
  hgvsc: ENST00000600421.1:n.291+32G>A
canonical: false
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1097
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4207
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2395
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1399
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2149
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15221
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3964
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4240
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1771
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1648
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4270
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2818
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly70Gly
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Latino
population: East Asian
population: Other
population: African
population: European (Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: DP

19-57908575-T-TA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57908575
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 57908576
    reference: chr 19
allele count: 1
allele frequency: 8.868235753179262e-6
allele num: 112762
alternate allele: TA
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000269533
  ensembl protein: ENSP00000471870
  ensembl transcript: ENST00000596617
  gene symbol: AC003002.6
  hgvsc: ENST00000596617.1:c.178+33_178+34insA
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268533
  ensembl protein: ENSP00000472152
  ensembl transcript: ENST00000597410
  gene symbol: AC004076.7
  hgvsc: ENST00000597410.1:c.41+2984_41+2985insA
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000379482
  ensembl transcript: ENST00000366197
  gene symbol: ZNF548
  hgvsc: ENST00000366197.5:c.142+33_142+34insA
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000468847
  ensembl transcript: ENST00000596282
  gene symbol: ZNF548
  hgvsc: ENST00000596282.1:c.151+33_151+34insA
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269533
  ensembl protein: ENSP00000472277
  ensembl transcript: ENST00000596400
  gene symbol: AC003002.6
  hgvsc: ENST00000596400.1:c.51+2984_51+2985insA
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269533
  ensembl transcript: ENST00000600421
  gene symbol: AC003002.6
  hgvsc: ENST00000600421.1:n.291+33_291+34insA
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268133
  ensembl protein: ENSP00000472894
  ensembl transcript: ENST00000597658
  gene symbol: AC003002.4
  hgvsc: ENST00000597658.1:c.152-1223_152-1222insA
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000473179
  ensembl transcript: ENST00000597400
  gene symbol: ZNF548
  hgvsc: ENST00000597400.1:c.178+33_178+34insA
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000470982
  ensembl transcript: ENST00000600927
  gene symbol: ZNF548
  hgvsc: ENST00000600927.1:c.151+33_151+34insA
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000469101
  ensembl transcript: ENST00000598895
  gene symbol: ZNF548
  hgvsc: ENST00000598895.1:c.211_212insA
  hgvsp: ENSP00000469101.1:p.Leu71TyrfsTer?
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000469598
  ensembl transcript: ENST00000594668
  gene symbol: ZNF548
  hgvsc: ENST00000594668.1:c.220+33_220+34insA
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000472618
  ensembl transcript: ENST00000602086
  gene symbol: ZNF548
  hgvsc: ENST00000602086.1:c.*182+33_*182+34insA
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl transcript: ENST00000597576
  gene symbol: ZNF548
  hgvsc: ENST00000597576.1:n.270+33_270+34insA
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000471923
  ensembl transcript: ENST00000597047
  gene symbol: ZNF548
  hgvsc: ENST00000597047.1:c.*110+33_*110+34insA
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000337555
  ensembl transcript: ENST00000336128
  gene symbol: ZNF548
  hgvsc: ENST00000336128.7:c.178+33_178+34insA
  variant of: http://identifiers.org/hgnc/26561
canonical: false
consequence: frameshift
filter: VQSRTrancheINDEL96.00to97.00
genotype depth: GenotypeDepth
  all individuals: 1648
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1784
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1088
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3823
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4207
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3306
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15220
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1439
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1463
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1644
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4270
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1399
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu71TyrfsTer?
num of homozygotes: 0
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: East Asian
population: Other
reference allele: T
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum

19-57908587-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57908587
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 57908587
    reference: chr 19
allele count: 1
allele frequency: 8.948065428254411e-6
allele num: 111756
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000468847
  ensembl transcript: ENST00000596282
  gene symbol: ZNF548
  hgvsc: ENST00000596282.1:c.151+45A>T
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000472618
  ensembl transcript: ENST00000602086
  gene symbol: ZNF548
  hgvsc: ENST00000602086.1:c.*182+45A>T
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000469598
  ensembl transcript: ENST00000594668
  gene symbol: ZNF548
  hgvsc: ENST00000594668.1:c.220+45A>T
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268133
  ensembl protein: ENSP00000472894
  ensembl transcript: ENST00000597658
  gene symbol: AC003002.4
  hgvsc: ENST00000597658.1:c.152-1211A>T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000469101
  ensembl transcript: ENST00000598895
  gene symbol: ZNF548
  hgvsc: ENST00000598895.1:c.223A>T
  hgvsp: ENSP00000469101.1:p.Thr75Ser
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269533
  ensembl protein: ENSP00000472277
  ensembl transcript: ENST00000596400
  gene symbol: AC003002.6
  hgvsc: ENST00000596400.1:c.51+2996A>T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268533
  ensembl protein: ENSP00000472152
  ensembl transcript: ENST00000597410
  gene symbol: AC004076.7
  hgvsc: ENST00000597410.1:c.41+2996A>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000473179
  ensembl transcript: ENST00000597400
  gene symbol: ZNF548
  hgvsc: ENST00000597400.1:c.178+45A>T
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000337555
  ensembl transcript: ENST00000336128
  gene symbol: ZNF548
  hgvsc: ENST00000336128.7:c.178+45A>T
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000269533
  ensembl protein: ENSP00000471870
  ensembl transcript: ENST00000596617
  gene symbol: AC003002.6
  hgvsc: ENST00000596617.1:c.178+45A>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl transcript: ENST00000597576
  gene symbol: ZNF548
  hgvsc: ENST00000597576.1:n.270+45A>T
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000470982
  ensembl transcript: ENST00000600927
  gene symbol: ZNF548
  hgvsc: ENST00000600927.1:c.151+45A>T
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000471923
  ensembl transcript: ENST00000597047
  gene symbol: ZNF548
  hgvsc: ENST00000597047.1:c.*110+45A>T
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000379482
  ensembl transcript: ENST00000366197
  gene symbol: ZNF548
  hgvsc: ENST00000366197.5:c.142+45A>T
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269533
  ensembl transcript: ENST00000600421
  gene symbol: AC003002.6
  hgvsc: ENST00000600421.1:n.291+45A>T
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2544
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1399
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1645
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3346
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4240
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2818
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2149
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2092
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4270
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3964
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1647
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr75Ser
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Latino
population: European (Finnish)
population: Other
population: African
population: South Asian
reference allele: A
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD

19-57908600-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57908600
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 57908600
    reference: chr 19
allele count: 3
allele frequency: 2.696871628910464e-5
allele num: 111240
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000269533
  ensembl protein: ENSP00000471870
  ensembl transcript: ENST00000596617
  gene symbol: AC003002.6
  hgvsc: ENST00000596617.1:c.178+58C>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000469598
  ensembl transcript: ENST00000594668
  gene symbol: ZNF548
  hgvsc: ENST00000594668.1:c.220+58C>T
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl transcript: ENST00000597576
  gene symbol: ZNF548
  hgvsc: ENST00000597576.1:n.270+58C>T
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000337555
  ensembl transcript: ENST00000336128
  gene symbol: ZNF548
  hgvsc: ENST00000336128.7:c.178+58C>T
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000472618
  ensembl transcript: ENST00000602086
  gene symbol: ZNF548
  hgvsc: ENST00000602086.1:c.*182+58C>T
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000469101
  ensembl transcript: ENST00000598895
  gene symbol: ZNF548
  hgvsc: ENST00000598895.1:c.236C>T
  hgvsp: ENSP00000469101.1:p.Pro79Leu
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269533
  ensembl protein: ENSP00000472277
  ensembl transcript: ENST00000596400
  gene symbol: AC003002.6
  hgvsc: ENST00000596400.1:c.51+3009C>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000473179
  ensembl transcript: ENST00000597400
  gene symbol: ZNF548
  hgvsc: ENST00000597400.1:c.178+58C>T
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000470982
  ensembl transcript: ENST00000600927
  gene symbol: ZNF548
  hgvsc: ENST00000600927.1:c.151+58C>T
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269533
  ensembl transcript: ENST00000600421
  gene symbol: AC003002.6
  hgvsc: ENST00000600421.1:n.291+58C>T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268533
  ensembl protein: ENSP00000472152
  ensembl transcript: ENST00000597410
  gene symbol: AC004076.7
  hgvsc: ENST00000597410.1:c.41+3009C>T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268133
  ensembl protein: ENSP00000472894
  ensembl transcript: ENST00000597658
  gene symbol: AC003002.4
  hgvsc: ENST00000597658.1:c.152-1198C>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000379482
  ensembl transcript: ENST00000366197
  gene symbol: ZNF548
  hgvsc: ENST00000366197.5:c.142+58C>T
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000468847
  ensembl transcript: ENST00000596282
  gene symbol: ZNF548
  hgvsc: ENST00000596282.1:c.151+58C>T
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000471923
  ensembl transcript: ENST00000597047
  gene symbol: ZNF548
  hgvsc: ENST00000597047.1:c.*110+58C>T
  variant of: http://identifiers.org/hgnc/26561
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1454
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1645
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3145
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3964
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3307
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1668
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1399
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4270
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2149
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4240
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro79Leu
num of homozygotes: 0
population: Other
population: East Asian
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum

19-57908615-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57908615
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 57908615
    reference: chr 19
allele count: 4
allele frequency: 3.610564511761414e-5
allele num: 110786
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000468847
  ensembl transcript: ENST00000596282
  gene symbol: ZNF548
  hgvsc: ENST00000596282.1:c.151+73G>A
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000473179
  ensembl transcript: ENST00000597400
  gene symbol: ZNF548
  hgvsc: ENST00000597400.1:c.178+73G>A
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268133
  ensembl protein: ENSP00000472894
  ensembl transcript: ENST00000597658
  gene symbol: AC003002.4
  hgvsc: ENST00000597658.1:c.152-1183G>A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000472618
  ensembl transcript: ENST00000602086
  gene symbol: ZNF548
  hgvsc: ENST00000602086.1:c.*182+73G>A
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000337555
  ensembl transcript: ENST00000336128
  gene symbol: ZNF548
  hgvsc: ENST00000336128.7:c.178+73G>A
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269533
  ensembl protein: ENSP00000472277
  ensembl transcript: ENST00000596400
  gene symbol: AC003002.6
  hgvsc: ENST00000596400.1:c.51+3024G>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000269533
  ensembl protein: ENSP00000471870
  ensembl transcript: ENST00000596617
  gene symbol: AC003002.6
  hgvsc: ENST00000596617.1:c.178+73G>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000469598
  ensembl transcript: ENST00000594668
  gene symbol: ZNF548
  hgvsc: ENST00000594668.1:c.220+73G>A
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000379482
  ensembl transcript: ENST00000366197
  gene symbol: ZNF548
  hgvsc: ENST00000366197.5:c.142+73G>A
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268533
  ensembl protein: ENSP00000472152
  ensembl transcript: ENST00000597410
  gene symbol: AC004076.7
  hgvsc: ENST00000597410.1:c.41+3024G>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000470982
  ensembl transcript: ENST00000600927
  gene symbol: ZNF548
  hgvsc: ENST00000600927.1:c.151+73G>A
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000469101
  ensembl transcript: ENST00000598895
  gene symbol: ZNF548
  hgvsc: ENST00000598895.1:c.251G>A
  hgvsp: ENSP00000469101.1:p.Arg84His
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269533
  ensembl transcript: ENST00000600421
  gene symbol: AC003002.6
  hgvsc: ENST00000600421.1:n.291+73G>A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000471923
  ensembl transcript: ENST00000597047
  gene symbol: ZNF548
  hgvsc: ENST00000597047.1:c.*110+73G>A
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl transcript: ENST00000597576
  gene symbol: ZNF548
  hgvsc: ENST00000597576.1:n.270+73G>A
  variant of: http://identifiers.org/hgnc/26561
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2149
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1040
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3964
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1446
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1400
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1645
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4240
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3307
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2819
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3346
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4270
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg84His
num of homozygotes: 0
population: East Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: MQ

http://identifiers.org/exac.variant/19-57908632-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57908632
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 57908632
    reference: chr 19
allele count: 1
allele frequency: 9.040120052794301e-6
allele num: 110618
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000469101
  ensembl transcript: ENST00000598895
  gene symbol: ZNF548
  hgvsc: ENST00000598895.1:c.*4C>A
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl transcript: ENST00000597576
  gene symbol: ZNF548
  hgvsc: ENST00000597576.1:n.270+90C>A
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268133
  ensembl protein: ENSP00000472894
  ensembl transcript: ENST00000597658
  gene symbol: AC003002.4
  hgvsc: ENST00000597658.1:c.152-1166C>A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000472618
  ensembl transcript: ENST00000602086
  gene symbol: ZNF548
  hgvsc: ENST00000602086.1:c.*182+90C>A
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000337555
  ensembl transcript: ENST00000336128
  gene symbol: ZNF548
  hgvsc: ENST00000336128.7:c.178+90C>A
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000470982
  ensembl transcript: ENST00000600927
  gene symbol: ZNF548
  hgvsc: ENST00000600927.1:c.151+90C>A
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268533
  ensembl protein: ENSP00000472152
  ensembl transcript: ENST00000597410
  gene symbol: AC004076.7
  hgvsc: ENST00000597410.1:c.41+3041C>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000473179
  ensembl transcript: ENST00000597400
  gene symbol: ZNF548
  hgvsc: ENST00000597400.1:c.178+90C>A
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000469598
  ensembl transcript: ENST00000594668
  gene symbol: ZNF548
  hgvsc: ENST00000594668.1:c.220+90C>A
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269533
  ensembl protein: ENSP00000472277
  ensembl transcript: ENST00000596400
  gene symbol: AC003002.6
  hgvsc: ENST00000596400.1:c.51+3041C>A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000471923
  ensembl transcript: ENST00000597047
  gene symbol: ZNF548
  hgvsc: ENST00000597047.1:c.*110+90C>A
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000269533
  ensembl protein: ENSP00000471870
  ensembl transcript: ENST00000596617
  gene symbol: AC003002.6
  hgvsc: ENST00000596617.1:c.178+90C>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269533
  ensembl transcript: ENST00000600421
  gene symbol: AC003002.6
  hgvsc: ENST00000600421.1:n.291+90C>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000379482
  ensembl transcript: ENST00000366197
  gene symbol: ZNF548
  hgvsc: ENST00000366197.5:c.142+90C>A
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000468847
  ensembl transcript: ENST00000596282
  gene symbol: ZNF548
  hgvsc: ENST00000596282.1:c.151+90C>A
  variant of: http://identifiers.org/hgnc/26561
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 521
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3823
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4270
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3854
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3964
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3307
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1397
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4240
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2149
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1427
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1631
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2817
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQ

19-57908632-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57908632
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 57908632
    reference: chr 19
allele count: 4
allele frequency: 3.616048021117721e-5
allele num: 110618
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268533
  ensembl protein: ENSP00000472152
  ensembl transcript: ENST00000597410
  gene symbol: AC004076.7
  hgvsc: ENST00000597410.1:c.41+3041C>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000269533
  ensembl protein: ENSP00000471870
  ensembl transcript: ENST00000596617
  gene symbol: AC003002.6
  hgvsc: ENST00000596617.1:c.178+90C>T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000469101
  ensembl transcript: ENST00000598895
  gene symbol: ZNF548
  hgvsc: ENST00000598895.1:c.*4C>T
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269533
  ensembl transcript: ENST00000600421
  gene symbol: AC003002.6
  hgvsc: ENST00000600421.1:n.291+90C>T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268133
  ensembl protein: ENSP00000472894
  ensembl transcript: ENST00000597658
  gene symbol: AC003002.4
  hgvsc: ENST00000597658.1:c.152-1166C>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000379482
  ensembl transcript: ENST00000366197
  gene symbol: ZNF548
  hgvsc: ENST00000366197.5:c.142+90C>T
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000470982
  ensembl transcript: ENST00000600927
  gene symbol: ZNF548
  hgvsc: ENST00000600927.1:c.151+90C>T
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269533
  ensembl protein: ENSP00000472277
  ensembl transcript: ENST00000596400
  gene symbol: AC003002.6
  hgvsc: ENST00000596400.1:c.51+3041C>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000473179
  ensembl transcript: ENST00000597400
  gene symbol: ZNF548
  hgvsc: ENST00000597400.1:c.178+90C>T
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000472618
  ensembl transcript: ENST00000602086
  gene symbol: ZNF548
  hgvsc: ENST00000602086.1:c.*182+90C>T
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000469598
  ensembl transcript: ENST00000594668
  gene symbol: ZNF548
  hgvsc: ENST00000594668.1:c.220+90C>T
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000471923
  ensembl transcript: ENST00000597047
  gene symbol: ZNF548
  hgvsc: ENST00000597047.1:c.*110+90C>T
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl transcript: ENST00000597576
  gene symbol: ZNF548
  hgvsc: ENST00000597576.1:n.270+90C>T
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000468847
  ensembl transcript: ENST00000596282
  gene symbol: ZNF548
  hgvsc: ENST00000596282.1:c.151+90C>T
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000337555
  ensembl transcript: ENST00000336128
  gene symbol: ZNF548
  hgvsc: ENST00000336128.7:c.178+90C>T
  variant of: http://identifiers.org/hgnc/26561
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1397
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1644
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4207
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3854
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2149
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4240
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 521
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2817
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1631
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4270
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3346
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
population: Latino
population: Other
population: South Asian
reference allele: C
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD

19-57908633-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57908633
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 57908633
    reference: chr 19
allele count: 4
allele frequency: 3.616178783879075e-5
allele num: 110614
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000379482
  ensembl transcript: ENST00000366197
  gene symbol: ZNF548
  hgvsc: ENST00000366197.5:c.142+91G>A
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269533
  ensembl protein: ENSP00000472277
  ensembl transcript: ENST00000596400
  gene symbol: AC003002.6
  hgvsc: ENST00000596400.1:c.51+3042G>A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000472618
  ensembl transcript: ENST00000602086
  gene symbol: ZNF548
  hgvsc: ENST00000602086.1:c.*182+91G>A
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000337555
  ensembl transcript: ENST00000336128
  gene symbol: ZNF548
  hgvsc: ENST00000336128.7:c.178+91G>A
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000269533
  ensembl protein: ENSP00000471870
  ensembl transcript: ENST00000596617
  gene symbol: AC003002.6
  hgvsc: ENST00000596617.1:c.178+91G>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl transcript: ENST00000597576
  gene symbol: ZNF548
  hgvsc: ENST00000597576.1:n.270+91G>A
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000468847
  ensembl transcript: ENST00000596282
  gene symbol: ZNF548
  hgvsc: ENST00000596282.1:c.151+91G>A
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000473179
  ensembl transcript: ENST00000597400
  gene symbol: ZNF548
  hgvsc: ENST00000597400.1:c.178+91G>A
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268533
  ensembl protein: ENSP00000472152
  ensembl transcript: ENST00000597410
  gene symbol: AC004076.7
  hgvsc: ENST00000597410.1:c.41+3042G>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000469598
  ensembl transcript: ENST00000594668
  gene symbol: ZNF548
  hgvsc: ENST00000594668.1:c.220+91G>A
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268133
  ensembl protein: ENSP00000472894
  ensembl transcript: ENST00000597658
  gene symbol: AC003002.4
  hgvsc: ENST00000597658.1:c.152-1165G>A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000469101
  ensembl transcript: ENST00000598895
  gene symbol: ZNF548
  hgvsc: ENST00000598895.1:c.*5G>A
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000471923
  ensembl transcript: ENST00000597047
  gene symbol: ZNF548
  hgvsc: ENST00000597047.1:c.*110+91G>A
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000470982
  ensembl transcript: ENST00000600927
  gene symbol: ZNF548
  hgvsc: ENST00000600927.1:c.151+91G>A
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269533
  ensembl transcript: ENST00000600421
  gene symbol: AC003002.6
  hgvsc: ENST00000600421.1:n.291+91G>A
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1398
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4270
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1429
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3307
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3347
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1626
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3855
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2149
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1645
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2817
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Other
population: African
population: European (Finnish)
population: Latino
reference allele: G
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum

19-57908633-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57908633
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 57908633
    reference: chr 19
allele count: 2
allele frequency: 1.808089391939537e-5
allele num: 110614
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000473179
  ensembl transcript: ENST00000597400
  gene symbol: ZNF548
  hgvsc: ENST00000597400.1:c.178+91G>T
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268533
  ensembl protein: ENSP00000472152
  ensembl transcript: ENST00000597410
  gene symbol: AC004076.7
  hgvsc: ENST00000597410.1:c.41+3042G>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000470982
  ensembl transcript: ENST00000600927
  gene symbol: ZNF548
  hgvsc: ENST00000600927.1:c.151+91G>T
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl transcript: ENST00000597576
  gene symbol: ZNF548
  hgvsc: ENST00000597576.1:n.270+91G>T
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000469598
  ensembl transcript: ENST00000594668
  gene symbol: ZNF548
  hgvsc: ENST00000594668.1:c.220+91G>T
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269533
  ensembl protein: ENSP00000472277
  ensembl transcript: ENST00000596400
  gene symbol: AC003002.6
  hgvsc: ENST00000596400.1:c.51+3042G>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000468847
  ensembl transcript: ENST00000596282
  gene symbol: ZNF548
  hgvsc: ENST00000596282.1:c.151+91G>T
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000472618
  ensembl transcript: ENST00000602086
  gene symbol: ZNF548
  hgvsc: ENST00000602086.1:c.*182+91G>T
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000469101
  ensembl transcript: ENST00000598895
  gene symbol: ZNF548
  hgvsc: ENST00000598895.1:c.*5G>T
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000337555
  ensembl transcript: ENST00000336128
  gene symbol: ZNF548
  hgvsc: ENST00000336128.7:c.178+91G>T
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000379482
  ensembl transcript: ENST00000366197
  gene symbol: ZNF548
  hgvsc: ENST00000366197.5:c.142+91G>T
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000269533
  ensembl protein: ENSP00000471870
  ensembl transcript: ENST00000596617
  gene symbol: AC003002.6
  hgvsc: ENST00000596617.1:c.178+91G>T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268133
  ensembl protein: ENSP00000472894
  ensembl transcript: ENST00000597658
  gene symbol: AC003002.4
  hgvsc: ENST00000597658.1:c.152-1165G>T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000471923
  ensembl transcript: ENST00000597047
  gene symbol: ZNF548
  hgvsc: ENST00000597047.1:c.*110+91G>T
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269533
  ensembl transcript: ENST00000600421
  gene symbol: AC003002.6
  hgvsc: ENST00000600421.1:n.291+91G>T
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1626
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1645
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1430
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1398
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4270
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2149
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3824
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3855
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3307
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: South Asian
population: European (Finnish)
population: East Asian
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum

19-57908635-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57908635
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 57908635
    reference: chr 19
allele count: 1
allele frequency: 9.041754823776199e-6
allele num: 110598
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000473179
  ensembl transcript: ENST00000597400
  gene symbol: ZNF548
  hgvsc: ENST00000597400.1:c.178+93G>C
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000471923
  ensembl transcript: ENST00000597047
  gene symbol: ZNF548
  hgvsc: ENST00000597047.1:c.*110+93G>C
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl transcript: ENST00000597576
  gene symbol: ZNF548
  hgvsc: ENST00000597576.1:n.270+93G>C
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268533
  ensembl protein: ENSP00000472152
  ensembl transcript: ENST00000597410
  gene symbol: AC004076.7
  hgvsc: ENST00000597410.1:c.41+3044G>C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000469101
  ensembl transcript: ENST00000598895
  gene symbol: ZNF548
  hgvsc: ENST00000598895.1:c.*7G>C
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000469598
  ensembl transcript: ENST00000594668
  gene symbol: ZNF548
  hgvsc: ENST00000594668.1:c.220+93G>C
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000269533
  ensembl protein: ENSP00000471870
  ensembl transcript: ENST00000596617
  gene symbol: AC003002.6
  hgvsc: ENST00000596617.1:c.178+93G>C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269533
  ensembl protein: ENSP00000472277
  ensembl transcript: ENST00000596400
  gene symbol: AC003002.6
  hgvsc: ENST00000596400.1:c.51+3044G>C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268133
  ensembl protein: ENSP00000472894
  ensembl transcript: ENST00000597658
  gene symbol: AC003002.4
  hgvsc: ENST00000597658.1:c.152-1163G>C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269533
  ensembl transcript: ENST00000600421
  gene symbol: AC003002.6
  hgvsc: ENST00000600421.1:n.291+93G>C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000470982
  ensembl transcript: ENST00000600927
  gene symbol: ZNF548
  hgvsc: ENST00000600927.1:c.151+93G>C
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000472618
  ensembl transcript: ENST00000602086
  gene symbol: ZNF548
  hgvsc: ENST00000602086.1:c.*182+93G>C
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000337555
  ensembl transcript: ENST00000336128
  gene symbol: ZNF548
  hgvsc: ENST00000336128.7:c.178+93G>C
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000379482
  ensembl transcript: ENST00000366197
  gene symbol: ZNF548
  hgvsc: ENST00000366197.5:c.142+93G>C
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000468847
  ensembl transcript: ENST00000596282
  gene symbol: ZNF548
  hgvsc: ENST00000596282.1:c.151+93G>C
  variant of: http://identifiers.org/hgnc/26561
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1628
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4240
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1396
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4270
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3825
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3856
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1428
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1425
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15208
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1646
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: South Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: Latino
population: East Asian
reference allele: G
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff

19-57908645-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57908645
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 57908645
    reference: chr 19
allele count: 12
allele frequency: 1.086090797190645e-4
allele num: 110488
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269533
  ensembl protein: ENSP00000472277
  ensembl transcript: ENST00000596400
  gene symbol: AC003002.6
  hgvsc: ENST00000596400.1:c.51+3054T>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000469598
  ensembl transcript: ENST00000594668
  gene symbol: ZNF548
  hgvsc: ENST00000594668.1:c.220+103T>G
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000269533
  ensembl protein: ENSP00000471870
  ensembl transcript: ENST00000596617
  gene symbol: AC003002.6
  hgvsc: ENST00000596617.1:c.178+103T>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000468847
  ensembl transcript: ENST00000596282
  gene symbol: ZNF548
  hgvsc: ENST00000596282.1:c.151+103T>G
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000472618
  ensembl transcript: ENST00000602086
  gene symbol: ZNF548
  hgvsc: ENST00000602086.1:c.*182+103T>G
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000469101
  ensembl transcript: ENST00000598895
  gene symbol: ZNF548
  hgvsc: ENST00000598895.1:c.*17T>G
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268133
  ensembl protein: ENSP00000472894
  ensembl transcript: ENST00000597658
  gene symbol: AC003002.4
  hgvsc: ENST00000597658.1:c.152-1153T>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl transcript: ENST00000597576
  gene symbol: ZNF548
  hgvsc: ENST00000597576.1:n.270+103T>G
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269533
  ensembl transcript: ENST00000600421
  gene symbol: AC003002.6
  hgvsc: ENST00000600421.1:n.291+103T>G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000471923
  ensembl transcript: ENST00000597047
  gene symbol: ZNF548
  hgvsc: ENST00000597047.1:c.*110+103T>G
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268533
  ensembl protein: ENSP00000472152
  ensembl transcript: ENST00000597410
  gene symbol: AC004076.7
  hgvsc: ENST00000597410.1:c.41+3054T>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000470982
  ensembl transcript: ENST00000600927
  gene symbol: ZNF548
  hgvsc: ENST00000600927.1:c.151+103T>G
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000337555
  ensembl transcript: ENST00000336128
  gene symbol: ZNF548
  hgvsc: ENST00000336128.7:c.178+103T>G
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000473179
  ensembl transcript: ENST00000597400
  gene symbol: ZNF548
  hgvsc: ENST00000597400.1:c.178+103T>G
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000379482
  ensembl transcript: ENST00000366197
  gene symbol: ZNF548
  hgvsc: ENST00000366197.5:c.142+103T>G
  variant of: http://identifiers.org/hgnc/26561
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3965
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1384
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3824
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4270
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15207
  bin: 9.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 3307
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2817
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4240
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3758
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3348
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1645
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: African
population: South Asian
population: European (Non-Finnish)
population: Latino
population: East Asian
population: Other
reference allele: T
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ

19-57908652-CCT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57908652
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 57908650
    reference: chr 19
allele count: 1
allele frequency: 9.053378720938654e-6
allele num: 110456
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000468847
  ensembl transcript: ENST00000596282
  gene symbol: ZNF548
  hgvsc: ENST00000596282.1:c.151+111_151+112delCT
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000472618
  ensembl transcript: ENST00000602086
  gene symbol: ZNF548
  hgvsc: ENST00000602086.1:c.*182+111_*182+112delCT
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268533
  ensembl protein: ENSP00000472152
  ensembl transcript: ENST00000597410
  gene symbol: AC004076.7
  hgvsc: ENST00000597410.1:c.41+3062_41+3063delCT
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000469101
  ensembl transcript: ENST00000598895
  gene symbol: ZNF548
  hgvsc: ENST00000598895.1:c.*25_*26delCT
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000469598
  ensembl transcript: ENST00000594668
  gene symbol: ZNF548
  hgvsc: ENST00000594668.1:c.220+111_220+112delCT
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000269533
  ensembl protein: ENSP00000471870
  ensembl transcript: ENST00000596617
  gene symbol: AC003002.6
  hgvsc: ENST00000596617.1:c.178+111_178+112delCT
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000379482
  ensembl transcript: ENST00000366197
  gene symbol: ZNF548
  hgvsc: ENST00000366197.5:c.142+111_142+112delCT
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269533
  ensembl protein: ENSP00000472277
  ensembl transcript: ENST00000596400
  gene symbol: AC003002.6
  hgvsc: ENST00000596400.1:c.51+3062_51+3063delCT
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000473179
  ensembl transcript: ENST00000597400
  gene symbol: ZNF548
  hgvsc: ENST00000597400.1:c.178+111_178+112delCT
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000471923
  ensembl transcript: ENST00000597047
  gene symbol: ZNF548
  hgvsc: ENST00000597047.1:c.*110+111_*110+112delCT
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268133
  ensembl protein: ENSP00000472894
  ensembl transcript: ENST00000597658
  gene symbol: AC003002.4
  hgvsc: ENST00000597658.1:c.152-1145_152-1144delCT
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000337555
  ensembl transcript: ENST00000336128
  gene symbol: ZNF548
  hgvsc: ENST00000336128.7:c.178+111_178+112delCT
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000470982
  ensembl transcript: ENST00000600927
  gene symbol: ZNF548
  hgvsc: ENST00000600927.1:c.151+111_151+112delCT
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl transcript: ENST00000597576
  gene symbol: ZNF548
  hgvsc: ENST00000597576.1:n.270+111_270+112delCT
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269533
  ensembl transcript: ENST00000600421
  gene symbol: AC003002.6
  hgvsc: ENST00000600421.1:n.291+111_291+112delCT
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4209
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3966
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4270
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3826
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1381
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3691
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1370
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1643
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4240
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2150
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3306
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: CCT
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff

19-57908653-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57908653
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 57908653
    reference: chr 19
allele count: 1
allele frequency: 9.054034477763291e-6
allele num: 110448
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000379482
  ensembl transcript: ENST00000366197
  gene symbol: ZNF548
  hgvsc: ENST00000366197.5:c.142+111C>G
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl transcript: ENST00000597576
  gene symbol: ZNF548
  hgvsc: ENST00000597576.1:n.270+111C>G
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000471923
  ensembl transcript: ENST00000597047
  gene symbol: ZNF548
  hgvsc: ENST00000597047.1:c.*110+111C>G
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000468847
  ensembl transcript: ENST00000596282
  gene symbol: ZNF548
  hgvsc: ENST00000596282.1:c.151+111C>G
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268533
  ensembl protein: ENSP00000472152
  ensembl transcript: ENST00000597410
  gene symbol: AC004076.7
  hgvsc: ENST00000597410.1:c.41+3062C>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000470982
  ensembl transcript: ENST00000600927
  gene symbol: ZNF548
  hgvsc: ENST00000600927.1:c.151+111C>G
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000469598
  ensembl transcript: ENST00000594668
  gene symbol: ZNF548
  hgvsc: ENST00000594668.1:c.220+111C>G
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269533
  ensembl protein: ENSP00000472277
  ensembl transcript: ENST00000596400
  gene symbol: AC003002.6
  hgvsc: ENST00000596400.1:c.51+3062C>G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000469101
  ensembl transcript: ENST00000598895
  gene symbol: ZNF548
  hgvsc: ENST00000598895.1:c.*25C>G
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000472618
  ensembl transcript: ENST00000602086
  gene symbol: ZNF548
  hgvsc: ENST00000602086.1:c.*182+111C>G
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000473179
  ensembl transcript: ENST00000597400
  gene symbol: ZNF548
  hgvsc: ENST00000597400.1:c.178+111C>G
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000337555
  ensembl transcript: ENST00000336128
  gene symbol: ZNF548
  hgvsc: ENST00000336128.7:c.178+111C>G
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268133
  ensembl protein: ENSP00000472894
  ensembl transcript: ENST00000597658
  gene symbol: AC003002.4
  hgvsc: ENST00000597658.1:c.152-1145C>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000269533
  ensembl protein: ENSP00000471870
  ensembl transcript: ENST00000596617
  gene symbol: AC003002.6
  hgvsc: ENST00000596617.1:c.178+111C>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269533
  ensembl transcript: ENST00000600421
  gene symbol: AC003002.6
  hgvsc: ENST00000600421.1:n.291+111C>G
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4240
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3655
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3966
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4270
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3826
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1381
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1366
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1323
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2817
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: East Asian
population: African
population: European (Finnish)
population: South Asian
population: Other
reference allele: C
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: QD

19-57908663-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57908663
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 57908663
    reference: chr 19
allele count: 21
allele frequency: 1.902380693553647e-4
allele num: 110388
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268533
  ensembl protein: ENSP00000472152
  ensembl transcript: ENST00000597410
  gene symbol: AC004076.7
  hgvsc: ENST00000597410.1:c.41+3072G>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000269533
  ensembl protein: ENSP00000471870
  ensembl transcript: ENST00000596617
  gene symbol: AC003002.6
  hgvsc: ENST00000596617.1:c.178+121G>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl transcript: ENST00000597576
  gene symbol: ZNF548
  hgvsc: ENST00000597576.1:n.270+121G>A
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000471923
  ensembl transcript: ENST00000597047
  gene symbol: ZNF548
  hgvsc: ENST00000597047.1:c.*110+121G>A
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269533
  ensembl protein: ENSP00000472277
  ensembl transcript: ENST00000596400
  gene symbol: AC003002.6
  hgvsc: ENST00000596400.1:c.51+3072G>A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000337555
  ensembl transcript: ENST00000336128
  gene symbol: ZNF548
  hgvsc: ENST00000336128.7:c.178+121G>A
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000469101
  ensembl transcript: ENST00000598895
  gene symbol: ZNF548
  hgvsc: ENST00000598895.1:c.*35G>A
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000472618
  ensembl transcript: ENST00000602086
  gene symbol: ZNF548
  hgvsc: ENST00000602086.1:c.*182+121G>A
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000473179
  ensembl transcript: ENST00000597400
  gene symbol: ZNF548
  hgvsc: ENST00000597400.1:c.178+121G>A
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268133
  ensembl protein: ENSP00000472894
  ensembl transcript: ENST00000597658
  gene symbol: AC003002.4
  hgvsc: ENST00000597658.1:c.152-1135G>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000469598
  ensembl transcript: ENST00000594668
  gene symbol: ZNF548
  hgvsc: ENST00000594668.1:c.220+121G>A
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000470982
  ensembl transcript: ENST00000600927
  gene symbol: ZNF548
  hgvsc: ENST00000600927.1:c.151+121G>A
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269533
  ensembl transcript: ENST00000600421
  gene symbol: AC003002.6
  hgvsc: ENST00000600421.1:n.291+121G>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000468847
  ensembl transcript: ENST00000596282
  gene symbol: ZNF548
  hgvsc: ENST00000596282.1:c.151+121G>A
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000379482
  ensembl transcript: ENST00000366197
  gene symbol: ZNF548
  hgvsc: ENST00000366197.5:c.142+121G>A
  variant of: http://identifiers.org/hgnc/26561
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1367
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4208
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3347
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4270
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2818
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1378
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3965
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1327
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15200
  bin: 9.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 3553
  bin: 2.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3828
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff

19-57908665-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57908665
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 57908665
    reference: chr 19
allele count: 1
allele frequency: 9.059283954196261e-6
allele num: 110384
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000468847
  ensembl transcript: ENST00000596282
  gene symbol: ZNF548
  hgvsc: ENST00000596282.1:c.151+123A>G
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000269533
  ensembl protein: ENSP00000471870
  ensembl transcript: ENST00000596617
  gene symbol: AC003002.6
  hgvsc: ENST00000596617.1:c.178+123A>G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269533
  ensembl protein: ENSP00000472277
  ensembl transcript: ENST00000596400
  gene symbol: AC003002.6
  hgvsc: ENST00000596400.1:c.51+3074A>G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268533
  ensembl protein: ENSP00000472152
  ensembl transcript: ENST00000597410
  gene symbol: AC004076.7
  hgvsc: ENST00000597410.1:c.41+3074A>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269533
  ensembl transcript: ENST00000600421
  gene symbol: AC003002.6
  hgvsc: ENST00000600421.1:n.291+123A>G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl transcript: ENST00000597576
  gene symbol: ZNF548
  hgvsc: ENST00000597576.1:n.270+123A>G
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000471923
  ensembl transcript: ENST00000597047
  gene symbol: ZNF548
  hgvsc: ENST00000597047.1:c.*110+123A>G
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000469101
  ensembl transcript: ENST00000598895
  gene symbol: ZNF548
  hgvsc: ENST00000598895.1:c.*37A>G
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000469598
  ensembl transcript: ENST00000594668
  gene symbol: ZNF548
  hgvsc: ENST00000594668.1:c.220+123A>G
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000472618
  ensembl transcript: ENST00000602086
  gene symbol: ZNF548
  hgvsc: ENST00000602086.1:c.*182+123A>G
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268133
  ensembl protein: ENSP00000472894
  ensembl transcript: ENST00000597658
  gene symbol: AC003002.4
  hgvsc: ENST00000597658.1:c.152-1133A>G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000337555
  ensembl transcript: ENST00000336128
  gene symbol: ZNF548
  hgvsc: ENST00000336128.7:c.178+123A>G
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000470982
  ensembl transcript: ENST00000600927
  gene symbol: ZNF548
  hgvsc: ENST00000600927.1:c.151+123A>G
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000379482
  ensembl transcript: ENST00000366197
  gene symbol: ZNF548
  hgvsc: ENST00000366197.5:c.142+123A>G
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000473179
  ensembl transcript: ENST00000597400
  gene symbol: ZNF548
  hgvsc: ENST00000597400.1:c.178+123A>G
  variant of: http://identifiers.org/hgnc/26561
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3542
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4209
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4269
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3963
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2821
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1334
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1088
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3827
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2149
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4238
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: East Asian
population: Other
population: European (Non-Finnish)
population: South Asian
population: African
population: European (Finnish)
reference allele: A
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD

19-57908665-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57908665
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 57908665
    reference: chr 19
allele count: 4
allele frequency: 3.623713581678504e-5
allele num: 110384
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000471923
  ensembl transcript: ENST00000597047
  gene symbol: ZNF548
  hgvsc: ENST00000597047.1:c.*110+123A>T
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000468847
  ensembl transcript: ENST00000596282
  gene symbol: ZNF548
  hgvsc: ENST00000596282.1:c.151+123A>T
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000469598
  ensembl transcript: ENST00000594668
  gene symbol: ZNF548
  hgvsc: ENST00000594668.1:c.220+123A>T
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000470982
  ensembl transcript: ENST00000600927
  gene symbol: ZNF548
  hgvsc: ENST00000600927.1:c.151+123A>T
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl transcript: ENST00000597576
  gene symbol: ZNF548
  hgvsc: ENST00000597576.1:n.270+123A>T
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000469101
  ensembl transcript: ENST00000598895
  gene symbol: ZNF548
  hgvsc: ENST00000598895.1:c.*37A>T
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000379482
  ensembl transcript: ENST00000366197
  gene symbol: ZNF548
  hgvsc: ENST00000366197.5:c.142+123A>T
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268533
  ensembl protein: ENSP00000472152
  ensembl transcript: ENST00000597410
  gene symbol: AC004076.7
  hgvsc: ENST00000597410.1:c.41+3074A>T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000472618
  ensembl transcript: ENST00000602086
  gene symbol: ZNF548
  hgvsc: ENST00000602086.1:c.*182+123A>T
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000473179
  ensembl transcript: ENST00000597400
  gene symbol: ZNF548
  hgvsc: ENST00000597400.1:c.178+123A>T
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269533
  ensembl protein: ENSP00000472277
  ensembl transcript: ENST00000596400
  gene symbol: AC003002.6
  hgvsc: ENST00000596400.1:c.51+3074A>T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000337555
  ensembl transcript: ENST00000336128
  gene symbol: ZNF548
  hgvsc: ENST00000336128.7:c.178+123A>T
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269533
  ensembl transcript: ENST00000600421
  gene symbol: AC003002.6
  hgvsc: ENST00000600421.1:n.291+123A>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000269533
  ensembl protein: ENSP00000471870
  ensembl transcript: ENST00000596617
  gene symbol: AC003002.6
  hgvsc: ENST00000596617.1:c.178+123A>T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268133
  ensembl protein: ENSP00000472894
  ensembl transcript: ENST00000597658
  gene symbol: AC003002.4
  hgvsc: ENST00000597658.1:c.152-1133A>T
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3350
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1644
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1334
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1374
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2821
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15196
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4269
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3963
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3542
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: East Asian
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: A
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ

19-57908668-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57908668
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 57908668
    reference: chr 19
allele count: 1
allele frequency: 9.060104734810734e-6
allele num: 110374
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000469101
  ensembl transcript: ENST00000598895
  gene symbol: ZNF548
  hgvsc: ENST00000598895.1:c.*40T>C
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000379482
  ensembl transcript: ENST00000366197
  gene symbol: ZNF548
  hgvsc: ENST00000366197.5:c.142+126T>C
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269533
  ensembl protein: ENSP00000472277
  ensembl transcript: ENST00000596400
  gene symbol: AC003002.6
  hgvsc: ENST00000596400.1:c.51+3077T>C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000472618
  ensembl transcript: ENST00000602086
  gene symbol: ZNF548
  hgvsc: ENST00000602086.1:c.*182+126T>C
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000470982
  ensembl transcript: ENST00000600927
  gene symbol: ZNF548
  hgvsc: ENST00000600927.1:c.151+126T>C
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000337555
  ensembl transcript: ENST00000336128
  gene symbol: ZNF548
  hgvsc: ENST00000336128.7:c.178+126T>C
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl transcript: ENST00000597576
  gene symbol: ZNF548
  hgvsc: ENST00000597576.1:n.270+126T>C
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269533
  ensembl transcript: ENST00000600421
  gene symbol: AC003002.6
  hgvsc: ENST00000600421.1:n.291+126T>C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000471923
  ensembl transcript: ENST00000597047
  gene symbol: ZNF548
  hgvsc: ENST00000597047.1:c.*110+126T>C
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000473179
  ensembl transcript: ENST00000597400
  gene symbol: ZNF548
  hgvsc: ENST00000597400.1:c.178+126T>C
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000469598
  ensembl transcript: ENST00000594668
  gene symbol: ZNF548
  hgvsc: ENST00000594668.1:c.220+126T>C
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000468847
  ensembl transcript: ENST00000596282
  gene symbol: ZNF548
  hgvsc: ENST00000596282.1:c.151+126T>C
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268533
  ensembl protein: ENSP00000472152
  ensembl transcript: ENST00000597410
  gene symbol: AC004076.7
  hgvsc: ENST00000597410.1:c.41+3077T>C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268133
  ensembl protein: ENSP00000472894
  ensembl transcript: ENST00000597658
  gene symbol: AC003002.4
  hgvsc: ENST00000597658.1:c.152-1130T>C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000269533
  ensembl protein: ENSP00000471870
  ensembl transcript: ENST00000596617
  gene symbol: AC003002.6
  hgvsc: ENST00000596617.1:c.178+126T>C
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3964
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3349
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3527
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4207
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3307
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4269
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1644
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2821
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1372
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2148
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: T
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum

19-57908673-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57908673
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 57908673
    reference: chr 19
allele count: 1
allele frequency: 9.06355363811043e-6
allele num: 110332
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000471923
  ensembl transcript: ENST00000597047
  gene symbol: ZNF548
  hgvsc: ENST00000597047.1:c.*110+131T>G
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000468847
  ensembl transcript: ENST00000596282
  gene symbol: ZNF548
  hgvsc: ENST00000596282.1:c.151+131T>G
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000473179
  ensembl transcript: ENST00000597400
  gene symbol: ZNF548
  hgvsc: ENST00000597400.1:c.178+131T>G
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000470982
  ensembl transcript: ENST00000600927
  gene symbol: ZNF548
  hgvsc: ENST00000600927.1:c.151+131T>G
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269533
  ensembl protein: ENSP00000472277
  ensembl transcript: ENST00000596400
  gene symbol: AC003002.6
  hgvsc: ENST00000596400.1:c.51+3082T>G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000337555
  ensembl transcript: ENST00000336128
  gene symbol: ZNF548
  hgvsc: ENST00000336128.7:c.178+131T>G
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000269533
  ensembl protein: ENSP00000471870
  ensembl transcript: ENST00000596617
  gene symbol: AC003002.6
  hgvsc: ENST00000596617.1:c.178+131T>G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268133
  ensembl protein: ENSP00000472894
  ensembl transcript: ENST00000597658
  gene symbol: AC003002.4
  hgvsc: ENST00000597658.1:c.152-1125T>G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000469101
  ensembl transcript: ENST00000598895
  gene symbol: ZNF548
  hgvsc: ENST00000598895.1:c.*45T>G
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268533
  ensembl protein: ENSP00000472152
  ensembl transcript: ENST00000597410
  gene symbol: AC004076.7
  hgvsc: ENST00000597410.1:c.41+3082T>G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000472618
  ensembl transcript: ENST00000602086
  gene symbol: ZNF548
  hgvsc: ENST00000602086.1:c.*182+131T>G
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000469598
  ensembl transcript: ENST00000594668
  gene symbol: ZNF548
  hgvsc: ENST00000594668.1:c.220+131T>G
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl transcript: ENST00000597576
  gene symbol: ZNF548
  hgvsc: ENST00000597576.1:n.270+131T>G
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269533
  ensembl transcript: ENST00000600421
  gene symbol: AC003002.6
  hgvsc: ENST00000600421.1:n.291+131T>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000379482
  ensembl transcript: ENST00000366197
  gene symbol: ZNF548
  hgvsc: ENST00000366197.5:c.142+131T>G
  variant of: http://identifiers.org/hgnc/26561
canonical: false
consequence: 3' UTR
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 2820
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 984
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3307
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2148
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4239
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1187
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3964
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3827
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1642
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1281
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 659
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
population: African
population: European (Non-Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: DP

19-57909742-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57909742
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 57909742
    reference: chr 19
allele count: 3
allele frequency: 2.655431242033706e-5
allele num: 112976
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000472618
  ensembl transcript: ENST00000602086
  gene symbol: ZNF548
  hgvsc: ENST00000602086.1:c.*183-56G>A
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000471923
  ensembl transcript: ENST00000597047
  gene symbol: ZNF548
  hgvsc: ENST00000597047.1:c.*111-56G>A
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000470982
  ensembl transcript: ENST00000600927
  gene symbol: ZNF548
  hgvsc: ENST00000600927.1:c.152-56G>A
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000473179
  ensembl transcript: ENST00000597400
  gene symbol: ZNF548
  hgvsc: ENST00000597400.1:c.179-39G>A
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269533
  ensembl transcript: ENST00000600421
  gene symbol: AC003002.6
  hgvsc: ENST00000600421.1:n.291+1200G>A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268533
  ensembl protein: ENSP00000472152
  ensembl transcript: ENST00000597410
  gene symbol: AC004076.7
  hgvsc: ENST00000597410.1:c.41+4151G>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl transcript: ENST00000597576
  gene symbol: ZNF548
  hgvsc: ENST00000597576.1:n.271-56G>A
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000469598
  ensembl transcript: ENST00000594668
  gene symbol: ZNF548
  hgvsc: ENST00000594668.1:c.221-56G>A
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269533
  ensembl protein: ENSP00000472277
  ensembl transcript: ENST00000596400
  gene symbol: AC003002.6
  hgvsc: ENST00000596400.1:c.51+4151G>A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000337555
  ensembl transcript: ENST00000336128
  gene symbol: ZNF548
  hgvsc: ENST00000336128.7:c.179-56G>A
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268133
  ensembl protein: ENSP00000472894
  ensembl transcript: ENST00000597658
  gene symbol: AC003002.4
  hgvsc: ENST00000597658.1:c.152-56G>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000468847
  ensembl transcript: ENST00000596282
  gene symbol: ZNF548
  hgvsc: ENST00000596282.1:c.152-56G>A
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000269533
  ensembl protein: ENSP00000471870
  ensembl transcript: ENST00000596617
  gene symbol: AC003002.6
  hgvsc: ENST00000596617.1:c.178+1200G>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000379482
  ensembl transcript: ENST00000366197
  gene symbol: ZNF548
  hgvsc: ENST00000366197.5:c.143-56G>A
  variant of: http://identifiers.org/hgnc/26561
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1448
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1741
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1084
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1133
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4327
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 966
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2176
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3304
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1114
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4456
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1481
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 909
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3033
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4476
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: Latino
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: G
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: QD

http://identifiers.org/exac.variant/19-57909766-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57909766
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 57909766
    reference: chr 19
allele count: 1
allele frequency: 8.70412923891094e-6
allele num: 114888
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000473179
  ensembl transcript: ENST00000597400
  gene symbol: ZNF548
  hgvsc: ENST00000597400.1:c.179-15C>A
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268133
  ensembl protein: ENSP00000472894
  ensembl transcript: ENST00000597658
  gene symbol: AC003002.4
  hgvsc: ENST00000597658.1:c.152-32C>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl transcript: ENST00000597576
  gene symbol: ZNF548
  hgvsc: ENST00000597576.1:n.271-32C>A
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000337555
  ensembl transcript: ENST00000336128
  gene symbol: ZNF548
  hgvsc: ENST00000336128.7:c.179-32C>A
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000269533
  ensembl protein: ENSP00000471870
  ensembl transcript: ENST00000596617
  gene symbol: AC003002.6
  hgvsc: ENST00000596617.1:c.178+1224C>A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000471923
  ensembl transcript: ENST00000597047
  gene symbol: ZNF548
  hgvsc: ENST00000597047.1:c.*111-32C>A
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268533
  ensembl protein: ENSP00000472152
  ensembl transcript: ENST00000597410
  gene symbol: AC004076.7
  hgvsc: ENST00000597410.1:c.41+4175C>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000470982
  ensembl transcript: ENST00000600927
  gene symbol: ZNF548
  hgvsc: ENST00000600927.1:c.152-32C>A
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269533
  ensembl protein: ENSP00000472277
  ensembl transcript: ENST00000596400
  gene symbol: AC003002.6
  hgvsc: ENST00000596400.1:c.51+4175C>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000469598
  ensembl transcript: ENST00000594668
  gene symbol: ZNF548
  hgvsc: ENST00000594668.1:c.221-32C>A
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269533
  ensembl transcript: ENST00000600421
  gene symbol: AC003002.6
  hgvsc: ENST00000600421.1:n.291+1224C>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000468847
  ensembl transcript: ENST00000596282
  gene symbol: ZNF548
  hgvsc: ENST00000596282.1:c.152-32C>A
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000472618
  ensembl transcript: ENST00000602086
  gene symbol: ZNF548
  hgvsc: ENST00000602086.1:c.*183-32C>A
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000379482
  ensembl transcript: ENST00000366197
  gene symbol: ZNF548
  hgvsc: ENST00000366197.5:c.143-32C>A
  variant of: http://identifiers.org/hgnc/26561
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 951
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4328
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4457
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1138
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3303
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2730
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1284
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2775
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1741
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1449
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 993
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1134
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4476
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17024
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Latino
population: European (Finnish)
population: African
reference allele: C
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum

19-57909766-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57909766
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 57909766
    reference: chr 19
allele count: 3
allele frequency: 2.611238771673282e-5
allele num: 114888
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000470982
  ensembl transcript: ENST00000600927
  gene symbol: ZNF548
  hgvsc: ENST00000600927.1:c.152-32C>T
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000471923
  ensembl transcript: ENST00000597047
  gene symbol: ZNF548
  hgvsc: ENST00000597047.1:c.*111-32C>T
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268133
  ensembl protein: ENSP00000472894
  ensembl transcript: ENST00000597658
  gene symbol: AC003002.4
  hgvsc: ENST00000597658.1:c.152-32C>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000473179
  ensembl transcript: ENST00000597400
  gene symbol: ZNF548
  hgvsc: ENST00000597400.1:c.179-15C>T
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268533
  ensembl protein: ENSP00000472152
  ensembl transcript: ENST00000597410
  gene symbol: AC004076.7
  hgvsc: ENST00000597410.1:c.41+4175C>T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269533
  ensembl protein: ENSP00000472277
  ensembl transcript: ENST00000596400
  gene symbol: AC003002.6
  hgvsc: ENST00000596400.1:c.51+4175C>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269533
  ensembl transcript: ENST00000600421
  gene symbol: AC003002.6
  hgvsc: ENST00000600421.1:n.291+1224C>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000269533
  ensembl protein: ENSP00000471870
  ensembl transcript: ENST00000596617
  gene symbol: AC003002.6
  hgvsc: ENST00000596617.1:c.178+1224C>T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000337555
  ensembl transcript: ENST00000336128
  gene symbol: ZNF548
  hgvsc: ENST00000336128.7:c.179-32C>T
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000472618
  ensembl transcript: ENST00000602086
  gene symbol: ZNF548
  hgvsc: ENST00000602086.1:c.*183-32C>T
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000468847
  ensembl transcript: ENST00000596282
  gene symbol: ZNF548
  hgvsc: ENST00000596282.1:c.152-32C>T
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000469598
  ensembl transcript: ENST00000594668
  gene symbol: ZNF548
  hgvsc: ENST00000594668.1:c.221-32C>T
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl transcript: ENST00000597576
  gene symbol: ZNF548
  hgvsc: ENST00000597576.1:n.271-32C>T
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000379482
  ensembl transcript: ENST00000366197
  gene symbol: ZNF548
  hgvsc: ENST00000366197.5:c.143-32C>T
  variant of: http://identifiers.org/hgnc/26561
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1134
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2730
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3904
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2096
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1741
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 951
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4328
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2175
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1449
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1138
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3303
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2775
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4457
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: Other
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: South Asian
population: African
reference allele: C
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: FS

19-57909769-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57909769
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 57909769
    reference: chr 19
allele count: 1
allele frequency: 8.669568082118148e-6
allele num: 115346
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000469598
  ensembl transcript: ENST00000594668
  gene symbol: ZNF548
  hgvsc: ENST00000594668.1:c.221-29G>A
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000269533
  ensembl protein: ENSP00000471870
  ensembl transcript: ENST00000596617
  gene symbol: AC003002.6
  hgvsc: ENST00000596617.1:c.178+1227G>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000468847
  ensembl transcript: ENST00000596282
  gene symbol: ZNF548
  hgvsc: ENST00000596282.1:c.152-29G>A
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000471923
  ensembl transcript: ENST00000597047
  gene symbol: ZNF548
  hgvsc: ENST00000597047.1:c.*111-29G>A
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000379482
  ensembl transcript: ENST00000366197
  gene symbol: ZNF548
  hgvsc: ENST00000366197.5:c.143-29G>A
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000337555
  ensembl transcript: ENST00000336128
  gene symbol: ZNF548
  hgvsc: ENST00000336128.7:c.179-29G>A
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000473179
  ensembl transcript: ENST00000597400
  gene symbol: ZNF548
  hgvsc: ENST00000597400.1:c.179-12G>A
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl transcript: ENST00000597576
  gene symbol: ZNF548
  hgvsc: ENST00000597576.1:n.271-29G>A
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268533
  ensembl protein: ENSP00000472152
  ensembl transcript: ENST00000597410
  gene symbol: AC004076.7
  hgvsc: ENST00000597410.1:c.41+4178G>A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000472618
  ensembl transcript: ENST00000602086
  gene symbol: ZNF548
  hgvsc: ENST00000602086.1:c.*183-29G>A
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268133
  ensembl protein: ENSP00000472894
  ensembl transcript: ENST00000597658
  gene symbol: AC003002.4
  hgvsc: ENST00000597658.1:c.152-29G>A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269533
  ensembl protein: ENSP00000472277
  ensembl transcript: ENST00000596400
  gene symbol: AC003002.6
  hgvsc: ENST00000596400.1:c.51+4178G>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269533
  ensembl transcript: ENST00000600421
  gene symbol: AC003002.6
  hgvsc: ENST00000600421.1:n.291+1227G>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000470982
  ensembl transcript: ENST00000600927
  gene symbol: ZNF548
  hgvsc: ENST00000600927.1:c.152-29G>A
  variant of: http://identifiers.org/hgnc/26561
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4457
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1007
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4059
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4476
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3303
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 951
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2643
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4328
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2730
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1740
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1042
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1310
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2328
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: East Asian
population: African
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: QD

19-57909772-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57909772
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 57909772
    reference: chr 19
allele count: 11
allele frequency: 9.503239740820734e-5
allele num: 115750
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269533
  ensembl protein: ENSP00000472277
  ensembl transcript: ENST00000596400
  gene symbol: AC003002.6
  hgvsc: ENST00000596400.1:c.51+4181C>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000470982
  ensembl transcript: ENST00000600927
  gene symbol: ZNF548
  hgvsc: ENST00000600927.1:c.152-26C>T
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268133
  ensembl protein: ENSP00000472894
  ensembl transcript: ENST00000597658
  gene symbol: AC003002.4
  hgvsc: ENST00000597658.1:c.152-26C>T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268533
  ensembl protein: ENSP00000472152
  ensembl transcript: ENST00000597410
  gene symbol: AC004076.7
  hgvsc: ENST00000597410.1:c.41+4181C>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000379482
  ensembl transcript: ENST00000366197
  gene symbol: ZNF548
  hgvsc: ENST00000366197.5:c.143-26C>T
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000472618
  ensembl transcript: ENST00000602086
  gene symbol: ZNF548
  hgvsc: ENST00000602086.1:c.*183-26C>T
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000469598
  ensembl transcript: ENST00000594668
  gene symbol: ZNF548
  hgvsc: ENST00000594668.1:c.221-26C>T
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000269533
  ensembl protein: ENSP00000471870
  ensembl transcript: ENST00000596617
  gene symbol: AC003002.6
  hgvsc: ENST00000596617.1:c.178+1230C>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl transcript: ENST00000597576
  gene symbol: ZNF548
  hgvsc: ENST00000597576.1:n.271-26C>T
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269533
  ensembl transcript: ENST00000600421
  gene symbol: AC003002.6
  hgvsc: ENST00000600421.1:n.291+1230C>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000468847
  ensembl transcript: ENST00000596282
  gene symbol: ZNF548
  hgvsc: ENST00000596282.1:c.152-26C>T
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000473179
  ensembl transcript: ENST00000597400
  gene symbol: ZNF548
  hgvsc: ENST00000597400.1:c.179-9C>T
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000471923
  ensembl transcript: ENST00000597047
  gene symbol: ZNF548
  hgvsc: ENST00000597047.1:c.*111-26C>T
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000337555
  ensembl transcript: ENST00000336128
  gene symbol: ZNF548
  hgvsc: ENST00000336128.7:c.179-26C>T
  variant of: http://identifiers.org/hgnc/26561
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1365
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1014
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2730
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1739
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3905
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2549
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3303
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 972
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 951
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4455
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2419
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17030
  bin: 9.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 2173
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: Other
population: African
population: Latino
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
reference allele: C
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP

19-57909778-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57909778
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 57909778
    reference: chr 19
allele count: 1
allele frequency: 8.563110121596164e-6
allele num: 116780
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000337555
  ensembl transcript: ENST00000336128
  gene symbol: ZNF548
  hgvsc: ENST00000336128.7:c.179-20C>T
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000471923
  ensembl transcript: ENST00000597047
  gene symbol: ZNF548
  hgvsc: ENST00000597047.1:c.*111-20C>T
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000472618
  ensembl transcript: ENST00000602086
  gene symbol: ZNF548
  hgvsc: ENST00000602086.1:c.*183-20C>T
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000269533
  ensembl protein: ENSP00000471870
  ensembl transcript: ENST00000596617
  gene symbol: AC003002.6
  hgvsc: ENST00000596617.1:c.178+1236C>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000468847
  ensembl transcript: ENST00000596282
  gene symbol: ZNF548
  hgvsc: ENST00000596282.1:c.152-20C>T
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269533
  ensembl protein: ENSP00000472277
  ensembl transcript: ENST00000596400
  gene symbol: AC003002.6
  hgvsc: ENST00000596400.1:c.51+4187C>T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268133
  ensembl protein: ENSP00000472894
  ensembl transcript: ENST00000597658
  gene symbol: AC003002.4
  hgvsc: ENST00000597658.1:c.152-20C>T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000473179
  ensembl transcript: ENST00000597400
  gene symbol: ZNF548
  hgvsc: ENST00000597400.1:c.179-3C>T
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000470982
  ensembl transcript: ENST00000600927
  gene symbol: ZNF548
  hgvsc: ENST00000600927.1:c.152-20C>T
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269533
  ensembl transcript: ENST00000600421
  gene symbol: AC003002.6
  hgvsc: ENST00000600421.1:n.291+1236C>T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl transcript: ENST00000597576
  gene symbol: ZNF548
  hgvsc: ENST00000597576.1:n.271-20C>T
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268533
  ensembl protein: ENSP00000472152
  ensembl transcript: ENST00000597410
  gene symbol: AC004076.7
  hgvsc: ENST00000597410.1:c.41+4187C>T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000469598
  ensembl transcript: ENST00000594668
  gene symbol: ZNF548
  hgvsc: ENST00000594668.1:c.221-20C>T
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000379482
  ensembl transcript: ENST00000366197
  gene symbol: ZNF548
  hgvsc: ENST00000366197.5:c.143-20C>T
  variant of: http://identifiers.org/hgnc/26561
canonical: false
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1960
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17031
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1137
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1450
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3904
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2173
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4476
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1488
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4059
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 958
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1037
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 780
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3304
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3124
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.179-3C>T
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: African
population: Other
population: South Asian
population: East Asian
reference allele: C
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum

19-57909780-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57909780
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 57909780
    reference: chr 19
allele count: 2
allele frequency: 1.706979840568083e-5
allele num: 117166
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000469598
  ensembl transcript: ENST00000594668
  gene symbol: ZNF548
  hgvsc: ENST00000594668.1:c.221-18G>A
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000472618
  ensembl transcript: ENST00000602086
  gene symbol: ZNF548
  hgvsc: ENST00000602086.1:c.*183-18G>A
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000470982
  ensembl transcript: ENST00000600927
  gene symbol: ZNF548
  hgvsc: ENST00000600927.1:c.152-18G>A
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268133
  ensembl protein: ENSP00000472894
  ensembl transcript: ENST00000597658
  gene symbol: AC003002.4
  hgvsc: ENST00000597658.1:c.152-18G>A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000379482
  ensembl transcript: ENST00000366197
  gene symbol: ZNF548
  hgvsc: ENST00000366197.5:c.143-18G>A
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000337555
  ensembl transcript: ENST00000336128
  gene symbol: ZNF548
  hgvsc: ENST00000336128.7:c.179-18G>A
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269533
  ensembl protein: ENSP00000472277
  ensembl transcript: ENST00000596400
  gene symbol: AC003002.6
  hgvsc: ENST00000596400.1:c.51+4189G>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269533
  ensembl transcript: ENST00000600421
  gene symbol: AC003002.6
  hgvsc: ENST00000600421.1:n.291+1238G>A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl transcript: ENST00000597576
  gene symbol: ZNF548
  hgvsc: ENST00000597576.1:n.271-18G>A
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268533
  ensembl protein: ENSP00000472152
  ensembl transcript: ENST00000597410
  gene symbol: AC004076.7
  hgvsc: ENST00000597410.1:c.41+4189G>A
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000473179
  ensembl transcript: ENST00000597400
  gene symbol: ZNF548
  hgvsc: ENST00000597400.1:c.179-1G>A
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000468847
  ensembl transcript: ENST00000596282
  gene symbol: ZNF548
  hgvsc: ENST00000596282.1:c.152-18G>A
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000269533
  ensembl protein: ENSP00000471870
  ensembl transcript: ENST00000596617
  gene symbol: AC003002.6
  hgvsc: ENST00000596617.1:c.178+1238G>A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000471923
  ensembl transcript: ENST00000597047
  gene symbol: ZNF548
  hgvsc: ENST00000597047.1:c.*111-18G>A
  variant of: http://identifiers.org/hgnc/26561
canonical: false
consequence: splice acceptor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 959
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4324
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1047
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4458
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1813
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 708
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4477
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1450
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3304
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3326
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2730
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1139
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4059
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.179-1G>A
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: QD

19-57909782-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57909782
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 57909782
    reference: chr 19
allele count: 1
allele frequency: 8.500943604740126e-6
allele num: 117634
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000470982
  ensembl transcript: ENST00000600927
  gene symbol: ZNF548
  hgvsc: ENST00000600927.1:c.152-16A>G
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268533
  ensembl protein: ENSP00000472152
  ensembl transcript: ENST00000597410
  gene symbol: AC004076.7
  hgvsc: ENST00000597410.1:c.41+4191A>G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268133
  ensembl protein: ENSP00000472894
  ensembl transcript: ENST00000597658
  gene symbol: AC003002.4
  hgvsc: ENST00000597658.1:c.152-16A>G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000471923
  ensembl transcript: ENST00000597047
  gene symbol: ZNF548
  hgvsc: ENST00000597047.1:c.*111-16A>G
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000337555
  ensembl transcript: ENST00000336128
  gene symbol: ZNF548
  hgvsc: ENST00000336128.7:c.179-16A>G
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269533
  ensembl protein: ENSP00000472277
  ensembl transcript: ENST00000596400
  gene symbol: AC003002.6
  hgvsc: ENST00000596400.1:c.51+4191A>G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000473179
  ensembl transcript: ENST00000597400
  gene symbol: ZNF548
  hgvsc: ENST00000597400.1:c.180A>G
  hgvsp: ENST00000597400.1:c.180A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000379482
  ensembl transcript: ENST00000366197
  gene symbol: ZNF548
  hgvsc: ENST00000366197.5:c.143-16A>G
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl transcript: ENST00000597576
  gene symbol: ZNF548
  hgvsc: ENST00000597576.1:n.271-16A>G
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000469598
  ensembl transcript: ENST00000594668
  gene symbol: ZNF548
  hgvsc: ENST00000594668.1:c.221-16A>G
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000468847
  ensembl transcript: ENST00000596282
  gene symbol: ZNF548
  hgvsc: ENST00000596282.1:c.152-16A>G
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269533
  ensembl transcript: ENST00000600421
  gene symbol: AC003002.6
  hgvsc: ENST00000600421.1:n.291+1240A>G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000269533
  ensembl protein: ENSP00000471870
  ensembl transcript: ENST00000596617
  gene symbol: AC003002.6
  hgvsc: ENST00000596617.1:c.178+1240A>G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000472618
  ensembl transcript: ENST00000602086
  gene symbol: ZNF548
  hgvsc: ENST00000602086.1:c.*183-16A>G
  variant of: http://identifiers.org/hgnc/26561
canonical: false
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4324
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1450
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4477
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 960
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17031
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2730
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2172
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1606
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1139
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3561
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1739
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1585
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.180A>G
num of homozygotes: 0
population: Other
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: East Asian
population: African
population: South Asian
reference allele: A
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD

19-57909804-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57909804
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 57909804
    reference: chr 19
allele count: 1
allele frequency: 8.332361224523806e-6
allele num: 120014
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000337555
  ensembl transcript: ENST00000336128
  gene symbol: ZNF548
  hgvsc: ENST00000336128.7:c.185G>C
  hgvsp: ENSP00000337555.6:p.Trp62Ser
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000470982
  ensembl transcript: ENST00000600927
  gene symbol: ZNF548
  hgvsc: ENST00000600927.1:c.158G>C
  hgvsp: ENSP00000470982.1:p.Trp53Ser
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000472618
  ensembl transcript: ENST00000602086
  gene symbol: ZNF548
  hgvsc: ENST00000602086.1:c.*189G>C
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000473179
  ensembl transcript: ENST00000597400
  gene symbol: ZNF548
  hgvsc: ENST00000597400.1:c.*10G>C
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000268133
  ensembl protein: ENSP00000472894
  ensembl transcript: ENST00000597658
  gene symbol: AC003002.4
  hgvsc: ENST00000597658.1:c.158G>C
  hgvsp: ENSP00000472894.1:p.Trp53Ser
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000379482
  ensembl transcript: ENST00000366197
  gene symbol: ZNF548
  hgvsc: ENST00000366197.5:c.149G>C
  hgvsp: ENSP00000379482.3:p.Trp50Ser
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000269533
  ensembl transcript: ENST00000600421
  gene symbol: AC003002.6
  hgvsc: ENST00000600421.1:n.291+1262G>C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000188785
  ensembl transcript: ENST00000597576
  gene symbol: ZNF548
  hgvsc: ENST00000597576.1:n.277G>C
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000471923
  ensembl transcript: ENST00000597047
  gene symbol: ZNF548
  hgvsc: ENST00000597047.1:c.*117G>C
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: incomplete_terminal_codon_variant
  consequence: coding_sequence_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000469598
  ensembl transcript: ENST00000594668
  gene symbol: ZNF548
  hgvsc: ENST00000594668.1:c.227G>C
  hgvsp: ENST00000594668.1:c.227G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/26561
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000269533
  ensembl protein: ENSP00000471870
  ensembl transcript: ENST00000596617
  gene symbol: AC003002.6
  hgvsc: ENST00000596617.1:c.178+1262G>C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000269533
  ensembl protein: ENSP00000472277
  ensembl transcript: ENST00000596400
  gene symbol: AC003002.6
  hgvsc: ENST00000596400.1:c.51+4213G>C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000268533
  ensembl protein: ENSP00000472152
  ensembl transcript: ENST00000597410
  gene symbol: AC004076.7
  hgvsc: ENST00000597410.1:c.41+4213G>C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000188785
  ensembl protein: ENSP00000468847
  ensembl transcript: ENST00000596282
  gene symbol: ZNF548
  hgvsc: ENST00000596282.1:c.158G>C
  hgvsp: ENSP00000468847.1:p.Trp53Ser
  variant of: http://identifiers.org/hgnc/26561
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17031
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2172
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 467
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1318
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1454
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4059
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2068
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3904
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3304
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4477
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1739
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Trp62Ser
num of homozygotes: 0
reference allele: G

GenotypeDepth
all individuals: 201
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 112
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 34
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 14998
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 770
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 550
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4466
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 980
bin: 5.25e1
variant carriers: 1

GenotypeDepth
all individuals: 62
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 522
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 699
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 578
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 119
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3923
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 574
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3898
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 427
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 458
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19548
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1676
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 306
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 622
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18629
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4080
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1489
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 398
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 513
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 304
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1788
bin: 3.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 736
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.886578877862884e-5
allele num: 53006
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9008
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7358
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7326
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5610
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13444
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.8e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 7.41e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.843e0

FS
type: SiteQuality
SIO_000300: 8.63e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.12e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.08e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.72e0

DP
type: SiteQuality
SIO_000300: 1.186537e6

QD
type: SiteQuality
SIO_000300: 1.25e1

GenotypeDepth
all individuals: 899
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 201
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 62
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4572
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5071
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 309
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 34
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1189
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 37
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 446
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1766
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4081
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 580
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 620
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 613
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 303
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1983
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 120
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1438
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 460
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 493
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19117
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18013
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 529
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 342
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 577
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 574
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4155
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4326
bin: 3.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7304
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 52984
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13426
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7352
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8998
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 736
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 3.522e0

MQRankSum
type: SiteQuality
SIO_000300: 3.61e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.61e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.61e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.14e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-3

QD
type: SiteQuality
SIO_000300: 9.619999999999999e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.61e-1

DP
type: SiteQuality
SIO_000300: 1.170681e6

GenotypeDepth
all individuals: 34
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 997
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 550
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 12463
bin: 2.25e1
variant carriers: 1

GenotypeDepth
all individuals: 309
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7104
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 37
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 20
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 112
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2618
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4080
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 518
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4805
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 615
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 146
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5441
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 431
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19846
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 570
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 596
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 434
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 521
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 575
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 576
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1984
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 14376
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1337
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 717
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 302
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5602
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7332
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13434
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.386193512614361e-4
allele num: 7214
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 734
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8954
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 52766
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.79e0

MQRankSum
type: SiteQuality
SIO_000300: -4.62e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.31e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.03e-1

FS
type: SiteQuality
SIO_000300: 4.993e0

DP
type: SiteQuality
SIO_000300: 1.136486e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.3e-3

QD
type: SiteQuality
SIO_000300: 1.542e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.54e-1

GenotypeDepth
all individuals: 3524
bin: 2.75e1
variant carriers: 7

GenotypeDepth
all individuals: 34
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 9191
bin: 1.75e1
variant carriers: 16

GenotypeDepth
all individuals: 18435
bin: 1.25e1
variant carriers: 15

GenotypeDepth
all individuals: 978
bin: 5.25e1
variant carriers: 2

GenotypeDepth
all individuals: 112
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 550
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 62
bin: 8.25e1
variant carriers: 1

GenotypeDepth
all individuals: 20
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6274
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2233
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 491
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 864
bin: 4.25e1
variant carriers: 1

GenotypeQuality
all individuals: 562
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 235
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3251
bin: 3.75e1
variant carriers: 1

GenotypeQuality
all individuals: 5245
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 381
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 20291
bin: 2.25e1
variant carriers: 1

GenotypeQuality
all individuals: 653
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1204
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 577
bin: 9.25e1
variant carriers: 2

GenotypeQuality
all individuals: 711
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 299
bin: 8.75e1
variant carriers: 1

GenotypeQuality
all individuals: 593
bin: 7.75e1
variant carriers: 3

GenotypeQuality
all individuals: 11507
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 591
bin: 1.25e1
variant carriers: 1

GenotypeQuality
all individuals: 390
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4116
bin: 9.75e1
variant carriers: 42

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7268
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5586
num of homozygotes: 0

African
type: Population
allele count: 43
allele frequency: 6.015668718522663e-3
allele num: 7148
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 3.387533875338753e-4
allele num: 8856
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.912484700122399e-5
allele num: 52288
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 732
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.7e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.09e-1

VQSLOD
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ClippingRankSum
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BaseQRankSum
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MQ
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DP
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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African
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Latino
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European (Finnish)
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Other
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East Asian
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QD
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MQRankSum
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FS
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DP
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BaseQRankSum
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VQSLOD
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ReadPosRankSum
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MQ
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ClippingRankSum
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InbreedingCoeff
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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Other
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allele frequency: 0.0e0
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European (Finnish)
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Latino
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allele frequency: 0.0e0
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European (Non-Finnish)
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South Asian
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East Asian
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VQSLOD
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BaseQRankSum
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MQRankSum
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FS
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DP
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ClippingRankSum
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InbreedingCoeff
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QD
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ReadPosRankSum
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MQ
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 5.950491907331006e-5
allele num: 50416
num of homozygotes: 0

East Asian
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num of homozygotes: 0

European (Finnish)
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num of homozygotes: 0

Other
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FS
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MQ
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ReadPosRankSum
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MQRankSum
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DP
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InbreedingCoeff
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VQSLOD
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ClippingRankSum
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QD
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BaseQRankSum
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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European (Non-Finnish)
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European (Finnish)
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East Asian
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Latino
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African
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South Asian
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BaseQRankSum
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InbreedingCoeff
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ClippingRankSum
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QD
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VQSLOD
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MQRankSum
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MQ
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FS
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DP
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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European (Finnish)
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South Asian
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Latino
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Other
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African
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European (Non-Finnish)
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MQRankSum
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ClippingRankSum
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FS
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MQ
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BaseQRankSum
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VQSLOD
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ReadPosRankSum
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InbreedingCoeff
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QD
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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East Asian
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Other
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European (Finnish)
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South Asian
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Latino
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European (Non-Finnish)
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BaseQRankSum
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SIO_000300: 3.77e-1

FS
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MQRankSum
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VQSLOD
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ReadPosRankSum
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QD
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MQ
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InbreedingCoeff
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ClippingRankSum
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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European (Finnish)
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African
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European (Non-Finnish)
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Other
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Latino
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MQRankSum
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QD
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FS
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BaseQRankSum
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MQ
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InbreedingCoeff
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ClippingRankSum
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DP
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VQSLOD
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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European (Finnish)
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allele frequency: 0.0e0
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African
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Latino
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East Asian
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European (Non-Finnish)
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Other
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MQRankSum
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VQSLOD
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MQ
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ClippingRankSum
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ReadPosRankSum
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BaseQRankSum
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FS
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InbreedingCoeff
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QD
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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num of homozygotes: 0

African
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European (Non-Finnish)
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Latino
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Other
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South Asian
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East Asian
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ClippingRankSum
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InbreedingCoeff
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QD
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BaseQRankSum
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MQRankSum
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FS
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ReadPosRankSum
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MQ
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DP
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VQSLOD
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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Latino
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European (Finnish)
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East Asian
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South Asian
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European (Non-Finnish)
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Other
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FS
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InbreedingCoeff
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MQRankSum
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VQSLOD
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ClippingRankSum
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QD
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MQ
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ReadPosRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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European (Finnish)
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Latino
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African
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South Asian
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East Asian
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QD
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ReadPosRankSum
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BaseQRankSum
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MQRankSum
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VQSLOD
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MQ
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ClippingRankSum
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FS
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InbreedingCoeff
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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South Asian
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European (Non-Finnish)
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East Asian
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MQ
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ClippingRankSum
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FS
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VQSLOD
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MQRankSum
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InbreedingCoeff
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ReadPosRankSum
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DP
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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East Asian
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European (Finnish)
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African
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South Asian
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ClippingRankSum
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VQSLOD
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FS
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InbreedingCoeff
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ReadPosRankSum
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BaseQRankSum
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MQ
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DP
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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European (Non-Finnish)
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East Asian
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European (Finnish)
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South Asian
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DP
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BaseQRankSum
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FS
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QD
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MQRankSum
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VQSLOD
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ReadPosRankSum
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MQ
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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European (Finnish)
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South Asian
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East Asian
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African
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European (Non-Finnish)
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MQRankSum
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DP
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ReadPosRankSum
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FS
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MQ
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VQSLOD
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InbreedingCoeff
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European (Finnish)
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East Asian
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InbreedingCoeff
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QD
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MQ
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VQSLOD
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European (Finnish)
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African
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East Asian
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South Asian
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MQRankSum
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BaseQRankSum
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VQSLOD
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InbreedingCoeff
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MQ
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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South Asian
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African
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Latino
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East Asian
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ReadPosRankSum
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FS
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BaseQRankSum
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InbreedingCoeff
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VQSLOD
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MQRankSum
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DP
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MQ
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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East Asian
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Latino
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European (Finnish)
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South Asian
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Other
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ClippingRankSum
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MQRankSum
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MQ
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InbreedingCoeff
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DP
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VQSLOD
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FS
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QD
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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African
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European (Finnish)
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Latino
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European (Non-Finnish)
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Other
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FS
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QD
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InbreedingCoeff
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BaseQRankSum
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MQ
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ReadPosRankSum
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DP
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MQRankSum
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ClippingRankSum
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VQSLOD
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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European (Finnish)
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South Asian
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African
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Latino
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Other
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VQSLOD
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BaseQRankSum
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MQRankSum
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InbreedingCoeff
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FS
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ClippingRankSum
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DP
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MQ
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ReadPosRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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African
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South Asian
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European (Non-Finnish)
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East Asian
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Latino
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QD
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ClippingRankSum
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MQ
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DP
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InbreedingCoeff
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VQSLOD
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FS
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ReadPosRankSum
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GenotypeQuality
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Other
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European (Non-Finnish)
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European (Finnish)
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East Asian
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African
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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DP
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InbreedingCoeff
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VQSLOD
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MQRankSum
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FS
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ClippingRankSum
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BaseQRankSum
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MQ
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QD
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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African
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European (Non-Finnish)
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East Asian
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Latino
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South Asian
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QD
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FS
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MQRankSum
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BaseQRankSum
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ClippingRankSum
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VQSLOD
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MQ
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InbreedingCoeff
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DP
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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African
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South Asian
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European (Finnish)
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num of homozygotes: 0

Latino
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European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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ReadPosRankSum
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BaseQRankSum
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VQSLOD
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QD
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FS
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MQRankSum
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ClippingRankSum
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DP
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MQ
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InbreedingCoeff
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SIO_000300: -2.0e-4

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele count: 2
allele frequency: 3.015317814497648e-5
allele num: 66328
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Other
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East Asian
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allele count: 0
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Latino
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European (Finnish)
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South Asian
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allele num: 15630
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African
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ClippingRankSum
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InbreedingCoeff
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MQ
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FS
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DP
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MQRankSum
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ReadPosRankSum
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VQSLOD
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BaseQRankSum
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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European (Non-Finnish)
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Latino
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African
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South Asian
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European (Finnish)
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East Asian
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FS
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ClippingRankSum
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InbreedingCoeff
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MQRankSum
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QD
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ReadPosRankSum
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VQSLOD
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BaseQRankSum
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MQ
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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South Asian
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African
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European (Finnish)
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Latino
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European (Non-Finnish)
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DP
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InbreedingCoeff
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ClippingRankSum
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MQRankSum
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ReadPosRankSum
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FS
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MQ
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BaseQRankSum
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VQSLOD
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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Latino
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Other
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European (Non-Finnish)
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East Asian
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African
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VQSLOD
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ClippingRankSum
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MQRankSum
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MQ
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ReadPosRankSum
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FS
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QD
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BaseQRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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African
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European (Non-Finnish)
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Latino
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European (Finnish)
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South Asian
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InbreedingCoeff
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BaseQRankSum
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VQSLOD
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QD
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ClippingRankSum
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MQ
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FS
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DP
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ReadPosRankSum
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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European (Non-Finnish)
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Other
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European (Finnish)
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African
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South Asian
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DP
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FS
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ReadPosRankSum
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VQSLOD
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BaseQRankSum
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MQRankSum
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MQ
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ClippingRankSum
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InbreedingCoeff
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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South Asian
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Other
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European (Finnish)
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Latino
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European (Non-Finnish)
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MQ
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VQSLOD
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DP
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FS
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MQRankSum
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ClippingRankSum
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BaseQRankSum
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InbreedingCoeff
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QD
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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African
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European (Finnish)
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South Asian
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ReadPosRankSum
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ClippingRankSum
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MQRankSum
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MQ
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InbreedingCoeff
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VQSLOD
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FS
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QD
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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South Asian
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Latino
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East Asian
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MQRankSum
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FS
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VQSLOD
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InbreedingCoeff
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MQ
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QD
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele frequency: 9.738994935722633e-5
allele num: 10268
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11520
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64542
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10424
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8594
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 800
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 4.53464e6

QD
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ClippingRankSum
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FS
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InbreedingCoeff
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VQSLOD
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MQ
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ReadPosRankSum
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BaseQRankSum
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SIO_000300: -3.421e0

MQRankSum
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SIO_000300: -2.117e0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.555113212241851e-5
allele num: 64304
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8572
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11506
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

InbreedingCoeff
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SIO_000300: -3.4e-3

FS
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SIO_000300: 2.602e0

MQ
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MQRankSum
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BaseQRankSum
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DP
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QD
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ClippingRankSum
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ReadPosRankSum
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SIO_000300: -2.07e-1

VQSLOD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
variant carriers: 0

Other
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allele frequency: 0.0e0
allele num: 794
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8550
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10206
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11494
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64172
num of homozygotes: 0

South Asian
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allele count: 3
allele frequency: 3.188097768331562e-4
allele num: 9410
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.54e-1

BaseQRankSum
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SIO_000300: -6.686e0

FS
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SIO_000300: 1.687e0

ClippingRankSum
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DP
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SIO_000300: 4.522076e6

MQ
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VQSLOD
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InbreedingCoeff
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SIO_000300: -2.4e-3

QD
type: SiteQuality
SIO_000300: 1.412e1

MQRankSum
type: SiteQuality
SIO_000300: 1.97e0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8536
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 794
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.683548256158866e-5
allele num: 64054
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11488
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.821253191907288e-5
allele num: 10182
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.966e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.0e-4

FS
type: SiteQuality
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QD
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ClippingRankSum
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SIO_000300: 1.57e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.620000000000001e-1

VQSLOD
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SIO_000300: -1.25e0

MQRankSum
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SIO_000300: 2.12e0

DP
type: SiteQuality
SIO_000300: 4.515189e6

MQ
type: SiteQuality
SIO_000300: 5.661e1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
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allele num: 64032
num of homozygotes: 0

South Asian
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Other
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BaseQRankSum
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VQSLOD
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DP
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ClippingRankSum
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ReadPosRankSum
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FS
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MQRankSum
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InbreedingCoeff
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QD
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MQ
type: SiteQuality
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 4

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 9.861932938856015e-5
allele num: 10140
num of homozygotes: 0

European (Non-Finnish)
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allele count: 3
allele frequency: 4.685157421289355e-5
allele num: 64032
num of homozygotes: 0

East Asian
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Latino
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Other
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South Asian
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MQ
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FS
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InbreedingCoeff
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ClippingRankSum
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ReadPosRankSum
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DP
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MQRankSum
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VQSLOD
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BaseQRankSum
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QD
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GenotypeDepth
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variant carriers: 4

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
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allele num: 64030
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South Asian
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Other
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African
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allele count: 3
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allele num: 10142
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11486
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 4.507965e6

MQRankSum
type: SiteQuality
SIO_000300: 9.64e-1

MQ
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SIO_000300: 5.527e1

ClippingRankSum
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SIO_000300: -5.52e-1

InbreedingCoeff
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SIO_000300: 6.9e-3

FS
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VQSLOD
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QD
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SIO_000300: 1.428e1

ReadPosRankSum
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SIO_000300: 2.57e-1

BaseQRankSum
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SIO_000300: -6.234e0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10142
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 9026
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8526
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11486
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 790
num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 3.123535842573794e-5
allele num: 64030
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 4.507965e6

MQ
type: SiteQuality
SIO_000300: 5.527e1

VQSLOD
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SIO_000300: -9.016999999999999e-1

BaseQRankSum
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SIO_000300: -6.234e0

MQRankSum
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SIO_000300: 9.64e-1

FS
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SIO_000300: 0.0e0

InbreedingCoeff
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SIO_000300: 6.9e-3

ClippingRankSum
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SIO_000300: -5.52e-1

QD
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SIO_000300: 1.428e1

ReadPosRankSum
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SIO_000300: 2.57e-1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 1.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10134
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9024
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.561865492143817e-5
allele num: 64026
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 790
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11486
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8524
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 4.507027e6

QD
type: SiteQuality
SIO_000300: 1.373e1

BaseQRankSum
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SIO_000300: -8.529999999999999e0

FS
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SIO_000300: 3.035e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.9e-2

MQ
type: SiteQuality
SIO_000300: 5.545e1

VQSLOD
type: SiteQuality
SIO_000300: -9.041e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.3e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.76e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.3e-3

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10072
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9014
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.25e-5
allele num: 64000
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.742160278745645e-4
allele num: 11480
num of homozygotes: 0

East Asian
type: Population
allele count: 6
allele frequency: 7.04390702042733e-4
allele num: 8518
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.14e-1

BaseQRankSum
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SIO_000300: 5.82e0

QD
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SIO_000300: 1.482e1

MQRankSum
type: SiteQuality
SIO_000300: 7.07e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.85e-1

DP
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SIO_000300: 4.502704e6

InbreedingCoeff
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SIO_000300: -1.3e-3

VQSLOD
type: SiteQuality
SIO_000300: -8.038999999999999e-1

MQ
type: SiteQuality
SIO_000300: 5.584e1

GenotypeDepth
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bin: 1.75e1
variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 10054
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 1.174536058256989e-4
allele num: 8514
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 0
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num of homozygotes: 0

Other
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MQRankSum
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MQ
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ReadPosRankSum
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DP
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BaseQRankSum
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ClippingRankSum
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FS
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QD
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VQSLOD
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InbreedingCoeff
type: SiteQuality
SIO_000300: 1.42e-2

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 1

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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num of homozygotes: 0

European (Non-Finnish)
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num of homozygotes: 0

East Asian
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African
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European (Finnish)
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South Asian
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Other
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FS
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InbreedingCoeff
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MQRankSum
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ClippingRankSum
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MQ
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BaseQRankSum
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VQSLOD
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DP
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ReadPosRankSum
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QD
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GenotypeDepth
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variant carriers: 1

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
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num of homozygotes: 0

Latino
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allele count: 2
allele frequency: 1.742160278745645e-4
allele num: 11480
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 19
allele frequency: 2.970142254181648e-4
allele num: 63970
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Other
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South Asian
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VQSLOD
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ReadPosRankSum
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QD
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BaseQRankSum
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DP
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FS
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ClippingRankSum
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MQ
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MQRankSum
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InbreedingCoeff
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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Other
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European (Non-Finnish)
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South Asian
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African
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European (Finnish)
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ClippingRankSum
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QD
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InbreedingCoeff
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FS
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ReadPosRankSum
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MQRankSum
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MQ
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DP
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BaseQRankSum
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VQSLOD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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Latino
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European (Finnish)
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East Asian
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Other
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European (Non-Finnish)
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South Asian
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VQSLOD
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QD
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DP
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FS
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MQRankSum
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ClippingRankSum
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ReadPosRankSum
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InbreedingCoeff
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MQ
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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num of homozygotes: 0

East Asian
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Latino
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African
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European (Non-Finnish)
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Other
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South Asian
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FS
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InbreedingCoeff
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MQ
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QD
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BaseQRankSum
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VQSLOD
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ClippingRankSum
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MQRankSum
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DP
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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East Asian
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European (Finnish)
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South Asian
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African
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European (Non-Finnish)
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InbreedingCoeff
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ReadPosRankSum
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QD
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BaseQRankSum
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ClippingRankSum
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MQRankSum
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VQSLOD
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FS
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MQ
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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Latino
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South Asian
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European (Finnish)
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European (Non-Finnish)
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East Asian
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MQRankSum
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MQ
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FS
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ClippingRankSum
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InbreedingCoeff
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VQSLOD
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DP
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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East Asian
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South Asian
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Latino
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European (Finnish)
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African
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VQSLOD
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ReadPosRankSum
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DP
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InbreedingCoeff
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MQ
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QD
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FS
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MQRankSum
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8604
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 840
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11534
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65116
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 2.411187911911268e-4
allele num: 12442
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9738
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 4.656037e6

BaseQRankSum
type: SiteQuality
SIO_000300: -3.067e0

QD
type: SiteQuality
SIO_000300: 1.275e1

VQSLOD
type: SiteQuality
SIO_000300: 9.62e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.52e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.193e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.4e-3

MQ
type: SiteQuality
SIO_000300: 5.948e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.08e0

FS
type: SiteQuality
SIO_000300: 2.753e0

GenotypeDepth
all individuals: 2175
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1449
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 17024
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3905
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1134
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2665
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 426
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 338
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 104
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 295
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 80
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 215
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 78
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2441
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 396
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 617
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 377
bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 852
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8610
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9752
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11536
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12780
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.533695285420693e-5
allele num: 65202
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.63e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.199999999999999e-2

FS
type: SiteQuality
SIO_000300: 1.878e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.182e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.26e-1

VQSLOD
type: SiteQuality
SIO_000300: -8.100000000000001e-1

MQ
type: SiteQuality
SIO_000300: 5.908e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-3

DP
type: SiteQuality
SIO_000300: 4.65973e6

QD
type: SiteQuality
SIO_000300: 8.26e0

GenotypeDepth
all individuals: 1135
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1449
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4477
bin: 8.25e1
variant carriers: 1

GenotypeDepth
all individuals: 4325
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variant carriers: 0

GenotypeDepth
all individuals: 4060
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variant carriers: 1

GenotypeQuality
all individuals: 42
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2604
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 51326
bin: 9.75e1
variant carriers: 11

GenotypeQuality
all individuals: 355
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 218
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 405
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 281
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 395
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 376
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 378
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 240
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 108
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2456
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 94
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 494
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 74
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 654
bin: 6.75e1
variant carriers: 0

South Asian
type: Population
allele count: 4
allele frequency: 3.059975520195838e-4
allele num: 13072
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 854
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9762
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11538
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65300
num of homozygotes: 0

East Asian
type: Population
allele count: 7
allele frequency: 8.130081300813008e-4
allele num: 8610
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.982e1

QD
type: SiteQuality
SIO_000300: 1.23e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.53e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.15e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.795e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.2e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.52e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.2e-1

DP
type: SiteQuality
SIO_000300: 4.664711e6

GenotypeDepth
all individuals: 1739
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 235
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 2730
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4457
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4324
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2023
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 77
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variant carriers: 0

GenotypeQuality
all individuals: 419
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variant carriers: 0

GenotypeQuality
all individuals: 255
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variant carriers: 0

GenotypeQuality
all individuals: 747
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 387
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variant carriers: 0

GenotypeQuality
all individuals: 379
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variant carriers: 0

GenotypeQuality
all individuals: 297
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 243
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variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 190
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 75
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3159
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 518
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 321
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 97
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 51329
bin: 9.75e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65520
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.664009703690868e-5
allele num: 11542
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9776
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 866
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13842
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -4.6e-2

QD
type: SiteQuality
SIO_000300: 8.16e0

VQSLOD
type: SiteQuality
SIO_000300: -3.58e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 4.674916e6

FS
type: SiteQuality
SIO_000300: 1.212e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.18e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.7e-1

GenotypeDepth
all individuals: 1520
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2172
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3904
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1739
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 17030
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 243
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 540
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 279
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3366
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 232
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variant carriers: 0

GenotypeQuality
all individuals: 423
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 786
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1867
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 381
bin: 9.25e1
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GenotypeQuality
all individuals: 51329
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 75
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 397
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 280
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46
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variant carriers: 0

GenotypeQuality
all individuals: 179
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 98
bin: 4.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9782
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11542
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.415428167020524e-4
allele num: 14130
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 870
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65608
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 9.27e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.227e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-3

VQSLOD
type: SiteQuality
SIO_000300: -1.852e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.641e0

FS
type: SiteQuality
SIO_000300: 4.68e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.17e0

DP
type: SiteQuality
SIO_000300: 4.67822e6

QD
type: SiteQuality
SIO_000300: 1.155e1

GenotypeDepth
all individuals: 3904
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3304
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4059
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4457
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1070
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 446
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variant carriers: 0

GenotypeQuality
all individuals: 3592
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 245
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 165
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 382
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 245
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 412
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GenotypeQuality
all individuals: 62
bin: 5.25e1
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GenotypeQuality
all individuals: 1655
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 215
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variant carriers: 0

GenotypeQuality
all individuals: 838
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 51332
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 544
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variant carriers: 0

GenotypeQuality
all individuals: 98
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 252
bin: 8.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11544
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.52077376969402e-5
allele num: 65756
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9796
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14430
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.7e-3

MQRankSum
type: SiteQuality
SIO_000300: 1.19e-1

FS
type: SiteQuality
SIO_000300: 2.419e0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.408e0

DP
type: SiteQuality
SIO_000300: 4.683145e6

ClippingRankSum
type: SiteQuality
SIO_000300: -3.55e-1

MQ
type: SiteQuality
SIO_000300: 5.968e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.35e0

VQSLOD
type: SiteQuality
SIO_000300: 9.71e-1

QD
type: SiteQuality
SIO_000300: 1.075e1

GenotypeDepth
all individuals: 989
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4457
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4324
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4622
bin: 2.25e1
variant carriers: 0