19-43269621-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43269621
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 43269621
    reference: chr 19
allele count: 1
allele frequency: 8.317945134833891e-6
allele num: 120222
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000386090
  ensembl transcript: ENST00000401467
  gene symbol: PSG8
  hgvsc: ENST00000401467.2:c.65-1188C>A
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl transcript: ENST00000469260
  gene symbol: PSG8
  hgvsc: ENST00000469260.1:n.150+49C>A
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000385869
  ensembl transcript: ENST00000404209
  gene symbol: PSG8
  hgvsc: ENST00000404209.4:c.64+49C>A
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl transcript: ENST00000593692
  gene symbol: PSG8
  hgvsc: ENST00000593692.1:n.146+49C>A
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000305005
  ensembl transcript: ENST00000306511
  gene symbol: PSG8
  hgvsc: ENST00000306511.4:c.64+49C>A
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000385081
  ensembl transcript: ENST00000406636
  gene symbol: PSG8
  hgvsc: ENST00000406636.3:c.64+49C>A
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000469979
  ensembl transcript: ENST00000478387
  gene symbol: PSG8
  hgvsc: ENST00000478387.1:c.64+49C>A
  variant of: http://identifiers.org/hgnc/9525
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2580
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 887
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3227
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5224
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4082
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3976
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5681
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6098
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2442
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1055
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6465
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3391
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4691
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 414
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1266
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6512
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1694
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 160
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1492
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 292
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 117
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1339
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1205
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 181
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 122
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: African
population: South Asian
population: Other
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: QD

19-43269623-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43269623
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 43269623
    reference: chr 19
allele count: 3
allele frequency: 2.495425054067543e-5
allele num: 120220
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000385869
  ensembl transcript: ENST00000404209
  gene symbol: PSG8
  hgvsc: ENST00000404209.4:c.64+47G>C
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl transcript: ENST00000593692
  gene symbol: PSG8
  hgvsc: ENST00000593692.1:n.146+47G>C
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000469979
  ensembl transcript: ENST00000478387
  gene symbol: PSG8
  hgvsc: ENST00000478387.1:c.64+47G>C
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000305005
  ensembl transcript: ENST00000306511
  gene symbol: PSG8
  hgvsc: ENST00000306511.4:c.64+47G>C
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl transcript: ENST00000469260
  gene symbol: PSG8
  hgvsc: ENST00000469260.1:n.150+47G>C
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000385081
  ensembl transcript: ENST00000406636
  gene symbol: PSG8
  hgvsc: ENST00000406636.3:c.64+47G>C
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000386090
  ensembl transcript: ENST00000401467
  gene symbol: PSG8
  hgvsc: ENST00000401467.2:c.65-1190G>C
  variant of: http://identifiers.org/hgnc/9525
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5229
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1075
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6511
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2450
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 414
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1694
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4690
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3392
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6100
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3974
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4082
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3235
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5680
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 887
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6465
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2580
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1266
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 178
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1204
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1499
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 127
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 856
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1341
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 114
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: African
population: Latino
population: South Asian
population: Other
reference allele: C
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum

19-43269627-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43269627
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 43269627
    reference: chr 19
allele count: 1
allele frequency: 8.317806760713336e-6
allele num: 120224
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000386090
  ensembl transcript: ENST00000401467
  gene symbol: PSG8
  hgvsc: ENST00000401467.2:c.65-1194G>A
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000385869
  ensembl transcript: ENST00000404209
  gene symbol: PSG8
  hgvsc: ENST00000404209.4:c.64+43G>A
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl transcript: ENST00000469260
  gene symbol: PSG8
  hgvsc: ENST00000469260.1:n.150+43G>A
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000469979
  ensembl transcript: ENST00000478387
  gene symbol: PSG8
  hgvsc: ENST00000478387.1:c.64+43G>A
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000305005
  ensembl transcript: ENST00000306511
  gene symbol: PSG8
  hgvsc: ENST00000306511.4:c.64+43G>A
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000385081
  ensembl transcript: ENST00000406636
  gene symbol: PSG8
  hgvsc: ENST00000406636.3:c.64+43G>A
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl transcript: ENST00000593692
  gene symbol: PSG8
  hgvsc: ENST00000593692.1:n.146+43G>A
  variant of: http://identifiers.org/hgnc/9525
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1694
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3974
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5680
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1159
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5234
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3258
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6511
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 887
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6464
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6099
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2580
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3392
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1266
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4691
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4082
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2465
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 768
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49884
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 171
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1341
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 122
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 861
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: East Asian
population: South Asian
population: African
reference allele: C
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: DP

19-43269630-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43269630
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 43269630
    reference: chr 19
allele count: 6
allele frequency: 4.990601034717948e-5
allele num: 120226
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000386090
  ensembl transcript: ENST00000401467
  gene symbol: PSG8
  hgvsc: ENST00000401467.2:c.65-1197G>A
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl transcript: ENST00000593692
  gene symbol: PSG8
  hgvsc: ENST00000593692.1:n.146+40G>A
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000385869
  ensembl transcript: ENST00000404209
  gene symbol: PSG8
  hgvsc: ENST00000404209.4:c.64+40G>A
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000305005
  ensembl transcript: ENST00000306511
  gene symbol: PSG8
  hgvsc: ENST00000306511.4:c.64+40G>A
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl transcript: ENST00000469260
  gene symbol: PSG8
  hgvsc: ENST00000469260.1:n.150+40G>A
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000469979
  ensembl transcript: ENST00000478387
  gene symbol: PSG8
  hgvsc: ENST00000478387.1:c.64+40G>A
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000385081
  ensembl transcript: ENST00000406636
  gene symbol: PSG8
  hgvsc: ENST00000406636.3:c.64+40G>A
  variant of: http://identifiers.org/hgnc/9525
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6465
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3269
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1191
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5680
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6510
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2474
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1266
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4082
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5235
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6100
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4691
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1693
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3393
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3976
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2581
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 888
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1347
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 771
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 862
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 122
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 114
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: South Asian
population: East Asian
population: Other
reference allele: C
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum

19-43269633-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43269633
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 43269633
    reference: chr 19
allele count: 1
allele frequency: 8.317945134833891e-6
allele num: 120222
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000386090
  ensembl transcript: ENST00000401467
  gene symbol: PSG8
  hgvsc: ENST00000401467.2:c.65-1200G>A
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl transcript: ENST00000469260
  gene symbol: PSG8
  hgvsc: ENST00000469260.1:n.150+37G>A
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000305005
  ensembl transcript: ENST00000306511
  gene symbol: PSG8
  hgvsc: ENST00000306511.4:c.64+37G>A
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000469979
  ensembl transcript: ENST00000478387
  gene symbol: PSG8
  hgvsc: ENST00000478387.1:c.64+37G>A
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl transcript: ENST00000593692
  gene symbol: PSG8
  hgvsc: ENST00000593692.1:n.146+37G>A
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000385081
  ensembl transcript: ENST00000406636
  gene symbol: PSG8
  hgvsc: ENST00000406636.3:c.64+37G>A
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000385869
  ensembl transcript: ENST00000404209
  gene symbol: PSG8
  hgvsc: ENST00000404209.4:c.64+37G>A
  variant of: http://identifiers.org/hgnc/9525
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1694
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 414
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1266
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5234
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4082
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5680
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2580
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3979
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2493
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3273
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6466
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4690
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1217
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3393
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6510
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6101
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 888
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1355
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 126
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 116
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 124
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 778
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 358
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1354
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1515
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: South Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum

19-43269636-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43269636
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 43269636
    reference: chr 19
allele count: 3
allele frequency: 2.495175993080045e-5
allele num: 120232
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000385081
  ensembl transcript: ENST00000406636
  gene symbol: PSG8
  hgvsc: ENST00000406636.3:c.64+34G>A
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000469979
  ensembl transcript: ENST00000478387
  gene symbol: PSG8
  hgvsc: ENST00000478387.1:c.64+34G>A
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000386090
  ensembl transcript: ENST00000401467
  gene symbol: PSG8
  hgvsc: ENST00000401467.2:c.65-1203G>A
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl transcript: ENST00000593692
  gene symbol: PSG8
  hgvsc: ENST00000593692.1:n.146+34G>A
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000385869
  ensembl transcript: ENST00000404209
  gene symbol: PSG8
  hgvsc: ENST00000404209.4:c.64+34G>A
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl transcript: ENST00000469260
  gene symbol: PSG8
  hgvsc: ENST00000469260.1:n.150+34G>A
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000305005
  ensembl transcript: ENST00000306511
  gene symbol: PSG8
  hgvsc: ENST00000306511.4:c.64+34G>A
  variant of: http://identifiers.org/hgnc/9525
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 888
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5235
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 416
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6100
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3984
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1693
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2581
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2524
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4690
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3277
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6511
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1208
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3394
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1267
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5680
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4082
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6466
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 161
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 784
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2490
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 124
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 862
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 367
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1349
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1513
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Other
population: European (Non-Finnish)
population: African
population: South Asian
population: Latino
population: European (Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: FS
site quality: DP
site quality: InbreedingCoeff

19-43269638-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43269638
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 43269638
    reference: chr 19
allele count: 121
allele frequency: 1.006354170132074e-3
allele num: 120236
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000305005
  ensembl transcript: ENST00000306511
  gene symbol: PSG8
  hgvsc: ENST00000306511.4:c.64+32A>T
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000385081
  ensembl transcript: ENST00000406636
  gene symbol: PSG8
  hgvsc: ENST00000406636.3:c.64+32A>T
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000469979
  ensembl transcript: ENST00000478387
  gene symbol: PSG8
  hgvsc: ENST00000478387.1:c.64+32A>T
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000385869
  ensembl transcript: ENST00000404209
  gene symbol: PSG8
  hgvsc: ENST00000404209.4:c.64+32A>T
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000386090
  ensembl transcript: ENST00000401467
  gene symbol: PSG8
  hgvsc: ENST00000401467.2:c.65-1205A>T
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl transcript: ENST00000469260
  gene symbol: PSG8
  hgvsc: ENST00000469260.1:n.150+32A>T
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl transcript: ENST00000593692
  gene symbol: PSG8
  hgvsc: ENST00000593692.1:n.146+32A>T
  variant of: http://identifiers.org/hgnc/9525
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 1.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 6096
  bin: 4.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 3988
  bin: 3.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 4104
  bin: 9.75e1
  variant carriers: 34
genotype depth: GenotypeDepth
  all individuals: 1203
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2538
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1694
  bin: 8.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5685
  bin: 6.25e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 2579
  bin: 7.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 3270
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3400
  bin: 7.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 890
  bin: 9.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 5224
  bin: 4.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 6468
  bin: 5.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 4692
  bin: 6.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 6504
  bin: 5.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 1263
  bin: 8.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 781
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 160
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 858
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1353
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1507
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Latino
population: East Asian
reference allele: T
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: DP
site quality: BaseQRankSum

19-43269639-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43269639
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 43269639
    reference: chr 19
allele count: 39
allele frequency: 3.243189302464824e-4
allele num: 120252
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000469979
  ensembl transcript: ENST00000478387
  gene symbol: PSG8
  hgvsc: ENST00000478387.1:c.64+31G>A
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000305005
  ensembl transcript: ENST00000306511
  gene symbol: PSG8
  hgvsc: ENST00000306511.4:c.64+31G>A
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl transcript: ENST00000593692
  gene symbol: PSG8
  hgvsc: ENST00000593692.1:n.146+31G>A
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl transcript: ENST00000469260
  gene symbol: PSG8
  hgvsc: ENST00000469260.1:n.150+31G>A
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000385869
  ensembl transcript: ENST00000404209
  gene symbol: PSG8
  hgvsc: ENST00000404209.4:c.64+31G>A
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000385081
  ensembl transcript: ENST00000406636
  gene symbol: PSG8
  hgvsc: ENST00000406636.3:c.64+31G>A
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000386090
  ensembl transcript: ENST00000401467
  gene symbol: PSG8
  hgvsc: ENST00000401467.2:c.65-1206G>A
  variant of: http://identifiers.org/hgnc/9525
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3270
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1700
  bin: 8.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 2542
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 895
  bin: 9.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1215
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1266
  bin: 8.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 5686
  bin: 6.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 6496
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3984
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6464
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4695
  bin: 6.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 3401
  bin: 7.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 5221
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2579
  bin: 7.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 6093
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 4106
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 387
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1220
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1505
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1346
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: QD

19-43269644-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43269644
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 43269644
    reference: chr 19
allele count: 1
allele frequency: 8.315040244794785e-6
allele num: 120264
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000305005
  ensembl transcript: ENST00000306511
  gene symbol: PSG8
  hgvsc: ENST00000306511.4:c.64+26G>A
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl transcript: ENST00000469260
  gene symbol: PSG8
  hgvsc: ENST00000469260.1:n.150+26G>A
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000469979
  ensembl transcript: ENST00000478387
  gene symbol: PSG8
  hgvsc: ENST00000478387.1:c.64+26G>A
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000385081
  ensembl transcript: ENST00000406636
  gene symbol: PSG8
  hgvsc: ENST00000406636.3:c.64+26G>A
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000385869
  ensembl transcript: ENST00000404209
  gene symbol: PSG8
  hgvsc: ENST00000404209.4:c.64+26G>A
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000386090
  ensembl transcript: ENST00000401467
  gene symbol: PSG8
  hgvsc: ENST00000401467.2:c.65-1211G>A
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl transcript: ENST00000593692
  gene symbol: PSG8
  hgvsc: ENST00000593692.1:n.146+26G>A
  variant of: http://identifiers.org/hgnc/9525
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1253
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3279
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3988
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4693
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 895
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2569
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6496
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 434
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3404
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5686
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2577
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6092
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4107
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1700
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5224
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6464
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1267
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 414
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2615
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1357
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 99
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Latino
population: African
reference allele: C
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff

19-43269645-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43269645
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 43269645
    reference: chr 19
allele count: 1
allele frequency: 8.314487162431821e-6
allele num: 120272
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl transcript: ENST00000469260
  gene symbol: PSG8
  hgvsc: ENST00000469260.1:n.150+25G>C
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl transcript: ENST00000593692
  gene symbol: PSG8
  hgvsc: ENST00000593692.1:n.146+25G>C
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000469979
  ensembl transcript: ENST00000478387
  gene symbol: PSG8
  hgvsc: ENST00000478387.1:c.64+25G>C
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000386090
  ensembl transcript: ENST00000401467
  gene symbol: PSG8
  hgvsc: ENST00000401467.2:c.65-1212G>C
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000385081
  ensembl transcript: ENST00000406636
  gene symbol: PSG8
  hgvsc: ENST00000406636.3:c.64+25G>C
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000385869
  ensembl transcript: ENST00000404209
  gene symbol: PSG8
  hgvsc: ENST00000404209.4:c.64+25G>C
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000305005
  ensembl transcript: ENST00000306511
  gene symbol: PSG8
  hgvsc: ENST00000306511.4:c.64+25G>C
  variant of: http://identifiers.org/hgnc/9525
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 894
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5227
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1260
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5686
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2577
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3403
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3987
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6464
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2563
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1700
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6092
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6496
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4693
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1267
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3284
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4108
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2614
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 859
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 143
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1231
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: African
population: European (Non-Finnish)
population: Other
population: Latino
population: European (Finnish)
reference allele: C
site quality: QD
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum

19-43269647-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43269647
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 43269647
    reference: chr 19
allele count: 24
allele frequency: 1.99527784243956e-4
allele num: 120284
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl transcript: ENST00000469260
  gene symbol: PSG8
  hgvsc: ENST00000469260.1:n.150+23G>C
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000385869
  ensembl transcript: ENST00000404209
  gene symbol: PSG8
  hgvsc: ENST00000404209.4:c.64+23G>C
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000305005
  ensembl transcript: ENST00000306511
  gene symbol: PSG8
  hgvsc: ENST00000306511.4:c.64+23G>C
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000469979
  ensembl transcript: ENST00000478387
  gene symbol: PSG8
  hgvsc: ENST00000478387.1:c.64+23G>C
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000385081
  ensembl transcript: ENST00000406636
  gene symbol: PSG8
  hgvsc: ENST00000406636.3:c.64+23G>C
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl transcript: ENST00000593692
  gene symbol: PSG8
  hgvsc: ENST00000593692.1:n.146+23G>C
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000386090
  ensembl transcript: ENST00000401467
  gene symbol: PSG8
  hgvsc: ENST00000401467.2:c.65-1214G>C
  variant of: http://identifiers.org/hgnc/9525
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6499
  bin: 5.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2577
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3285
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5223
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4111
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 5684
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1703
  bin: 8.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 6091
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 896
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3404
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4694
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2567
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3983
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6462
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1268
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1267
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 861
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2620
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 138
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 416
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1354
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1358
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 1
population: Other
population: African
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: East Asian
reference allele: C
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff

http://identifiers.org/exac.variant/19-43269649-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43269649
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 43269649
    reference: chr 19
allele count: 21
allele frequency: 1.745897141716965e-4
allele num: 120282
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000385869
  ensembl transcript: ENST00000404209
  gene symbol: PSG8
  hgvsc: ENST00000404209.4:c.64+21G>T
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000305005
  ensembl transcript: ENST00000306511
  gene symbol: PSG8
  hgvsc: ENST00000306511.4:c.64+21G>T
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000385081
  ensembl transcript: ENST00000406636
  gene symbol: PSG8
  hgvsc: ENST00000406636.3:c.64+21G>T
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000469979
  ensembl transcript: ENST00000478387
  gene symbol: PSG8
  hgvsc: ENST00000478387.1:c.64+21G>T
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl transcript: ENST00000593692
  gene symbol: PSG8
  hgvsc: ENST00000593692.1:n.146+21G>T
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl transcript: ENST00000469260
  gene symbol: PSG8
  hgvsc: ENST00000469260.1:n.150+21G>T
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000386090
  ensembl transcript: ENST00000401467
  gene symbol: PSG8
  hgvsc: ENST00000401467.2:c.65-1216G>T
  variant of: http://identifiers.org/hgnc/9525
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6459
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6091
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1274
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2577
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5226
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1704
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3405
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5686
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3284
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4691
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1269
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3983
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 896
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6495
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2578
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4116
  bin: 9.75e1
  variant carriers: 10
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 132
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1361
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 430
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Other
reference allele: C
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: QD

19-43269652-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43269652
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 43269652
    reference: chr 19
allele count: 1
allele frequency: 8.312275568559649e-6
allele num: 120304
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000385081
  ensembl transcript: ENST00000406636
  gene symbol: PSG8
  hgvsc: ENST00000406636.3:c.64+18T>C
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000305005
  ensembl transcript: ENST00000306511
  gene symbol: PSG8
  hgvsc: ENST00000306511.4:c.64+18T>C
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000385869
  ensembl transcript: ENST00000404209
  gene symbol: PSG8
  hgvsc: ENST00000404209.4:c.64+18T>C
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl transcript: ENST00000469260
  gene symbol: PSG8
  hgvsc: ENST00000469260.1:n.150+18T>C
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000386090
  ensembl transcript: ENST00000401467
  gene symbol: PSG8
  hgvsc: ENST00000401467.2:c.65-1219T>C
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl transcript: ENST00000593692
  gene symbol: PSG8
  hgvsc: ENST00000593692.1:n.146+18T>C
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000469979
  ensembl transcript: ENST00000478387
  gene symbol: PSG8
  hgvsc: ENST00000478387.1:c.64+18T>C
  variant of: http://identifiers.org/hgnc/9525
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1269
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4692
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4111
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6497
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2600
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1285
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6459
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3294
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 895
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6093
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1704
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5223
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3407
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3986
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5687
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2577
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 121
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 98
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 862
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 441
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1363
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: South Asian
population: East Asian
reference allele: A
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff

19-43269654-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43269654
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 43269654
    reference: chr 19
allele count: 1
allele frequency: 8.309788931361144e-6
allele num: 120340
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000386090
  ensembl transcript: ENST00000401467
  gene symbol: PSG8
  hgvsc: ENST00000401467.2:c.65-1221C>G
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000385869
  ensembl transcript: ENST00000404209
  gene symbol: PSG8
  hgvsc: ENST00000404209.4:c.64+16C>G
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl transcript: ENST00000593692
  gene symbol: PSG8
  hgvsc: ENST00000593692.1:n.146+16C>G
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000469979
  ensembl transcript: ENST00000478387
  gene symbol: PSG8
  hgvsc: ENST00000478387.1:c.64+16C>G
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl transcript: ENST00000469260
  gene symbol: PSG8
  hgvsc: ENST00000469260.1:n.150+16C>G
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000385081
  ensembl transcript: ENST00000406636
  gene symbol: PSG8
  hgvsc: ENST00000406636.3:c.64+16C>G
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000305005
  ensembl transcript: ENST00000306511
  gene symbol: PSG8
  hgvsc: ENST00000306511.4:c.64+16C>G
  variant of: http://identifiers.org/hgnc/9525
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5224
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3297
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5687
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3407
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3989
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1269
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6497
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 895
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1306
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2577
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1704
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4691
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2623
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6093
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6459
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4112
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 95
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 114
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 439
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1242
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1513
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum

http://identifiers.org/exac.variant/19-43269655-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43269655
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 43269655
    reference: chr 19
allele count: 1
allele frequency: 8.3099270388406e-6
allele num: 120338
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000385869
  ensembl transcript: ENST00000404209
  gene symbol: PSG8
  hgvsc: ENST00000404209.4:c.64+15T>G
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000305005
  ensembl transcript: ENST00000306511
  gene symbol: PSG8
  hgvsc: ENST00000306511.4:c.64+15T>G
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000469979
  ensembl transcript: ENST00000478387
  gene symbol: PSG8
  hgvsc: ENST00000478387.1:c.64+15T>G
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl transcript: ENST00000469260
  gene symbol: PSG8
  hgvsc: ENST00000469260.1:n.150+15T>G
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl transcript: ENST00000593692
  gene symbol: PSG8
  hgvsc: ENST00000593692.1:n.146+15T>G
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000386090
  ensembl transcript: ENST00000401467
  gene symbol: PSG8
  hgvsc: ENST00000401467.2:c.65-1222T>G
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000385081
  ensembl transcript: ENST00000406636
  gene symbol: PSG8
  hgvsc: ENST00000406636.3:c.64+15T>G
  variant of: http://identifiers.org/hgnc/9525
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6498
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2577
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1302
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 895
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4112
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4691
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5687
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3988
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1704
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6459
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5225
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2634
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3296
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6093
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3407
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1269
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1363
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1241
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: Other
reference allele: A
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: DP

19-43269656-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43269656
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 43269656
    reference: chr 19
allele count: 20
allele frequency: 1.661957786272229e-4
allele num: 120340
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000305005
  ensembl transcript: ENST00000306511
  gene symbol: PSG8
  hgvsc: ENST00000306511.4:c.64+14C>T
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000469979
  ensembl transcript: ENST00000478387
  gene symbol: PSG8
  hgvsc: ENST00000478387.1:c.64+14C>T
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000385081
  ensembl transcript: ENST00000406636
  gene symbol: PSG8
  hgvsc: ENST00000406636.3:c.64+14C>T
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl transcript: ENST00000593692
  gene symbol: PSG8
  hgvsc: ENST00000593692.1:n.146+14C>T
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000385869
  ensembl transcript: ENST00000404209
  gene symbol: PSG8
  hgvsc: ENST00000404209.4:c.64+14C>T
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl transcript: ENST00000469260
  gene symbol: PSG8
  hgvsc: ENST00000469260.1:n.150+14C>T
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000386090
  ensembl transcript: ENST00000401467
  gene symbol: PSG8
  hgvsc: ENST00000401467.2:c.65-1223C>T
  variant of: http://identifiers.org/hgnc/9525
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 896
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3408
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6460
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6090
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1318
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5686
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2634
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5224
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3989
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6498
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4692
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1269
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3297
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1706
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4116
  bin: 9.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 2575
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 795
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1512
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Other
population: European (Finnish)
population: Latino
reference allele: G
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum

19-43269657-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43269657
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 43269657
    reference: chr 19
allele count: 1
allele frequency: 8.30923654734603e-6
allele num: 120348
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl transcript: ENST00000469260
  gene symbol: PSG8
  hgvsc: ENST00000469260.1:n.150+13C>A
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl transcript: ENST00000593692
  gene symbol: PSG8
  hgvsc: ENST00000593692.1:n.146+13C>A
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000385081
  ensembl transcript: ENST00000406636
  gene symbol: PSG8
  hgvsc: ENST00000406636.3:c.64+13C>A
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000305005
  ensembl transcript: ENST00000306511
  gene symbol: PSG8
  hgvsc: ENST00000306511.4:c.64+13C>A
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000469979
  ensembl transcript: ENST00000478387
  gene symbol: PSG8
  hgvsc: ENST00000478387.1:c.64+13C>A
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000385869
  ensembl transcript: ENST00000404209
  gene symbol: PSG8
  hgvsc: ENST00000404209.4:c.64+13C>A
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000386090
  ensembl transcript: ENST00000401467
  gene symbol: PSG8
  hgvsc: ENST00000401467.2:c.65-1224C>A
  variant of: http://identifiers.org/hgnc/9525
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5685
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2639
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6463
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 894
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1311
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3304
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2574
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3409
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6498
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4692
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1704
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6092
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3991
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5224
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1269
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4114
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 862
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 797
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 436
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1381
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49924
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2734
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: East Asian
reference allele: G
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: InbreedingCoeff

19-43269659-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43269659
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 43269659
    reference: chr 19
allele count: 1
allele frequency: 8.308960382876895e-6
allele num: 120352
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000469979
  ensembl transcript: ENST00000478387
  gene symbol: PSG8
  hgvsc: ENST00000478387.1:c.64+11A>G
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl transcript: ENST00000469260
  gene symbol: PSG8
  hgvsc: ENST00000469260.1:n.150+11A>G
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000385869
  ensembl transcript: ENST00000404209
  gene symbol: PSG8
  hgvsc: ENST00000404209.4:c.64+11A>G
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl transcript: ENST00000593692
  gene symbol: PSG8
  hgvsc: ENST00000593692.1:n.146+11A>G
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000305005
  ensembl transcript: ENST00000306511
  gene symbol: PSG8
  hgvsc: ENST00000306511.4:c.64+11A>G
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000385081
  ensembl transcript: ENST00000406636
  gene symbol: PSG8
  hgvsc: ENST00000406636.3:c.64+11A>G
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000386090
  ensembl transcript: ENST00000401467
  gene symbol: PSG8
  hgvsc: ENST00000401467.2:c.65-1226A>G
  variant of: http://identifiers.org/hgnc/9525
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 1270
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3303
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6498
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3992
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6092
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1315
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 894
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6462
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1704
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2648
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3409
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5224
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4692
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2574
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5686
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4113
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 863
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2740
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1380
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 797
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: South Asian
population: Latino
reference allele: T
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD

19-43269666-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43269666
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 43269666
    reference: chr 19
allele count: 1
allele frequency: 8.304820117596252e-6
allele num: 120412
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000385081
  ensembl transcript: ENST00000406636
  gene symbol: PSG8
  hgvsc: ENST00000406636.3:c.64+4A>C
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000385869
  ensembl transcript: ENST00000404209
  gene symbol: PSG8
  hgvsc: ENST00000404209.4:c.64+4A>C
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl transcript: ENST00000469260
  gene symbol: PSG8
  hgvsc: ENST00000469260.1:n.150+4A>C
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl transcript: ENST00000593692
  gene symbol: PSG8
  hgvsc: ENST00000593692.1:n.146+4A>C
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000386090
  ensembl transcript: ENST00000401467
  gene symbol: PSG8
  hgvsc: ENST00000401467.2:c.65-1233A>C
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000469979
  ensembl transcript: ENST00000478387
  gene symbol: PSG8
  hgvsc: ENST00000478387.1:c.64+4A>C
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000305005
  ensembl transcript: ENST00000306511
  gene symbol: PSG8
  hgvsc: ENST00000306511.4:c.64+4A>C
  variant of: http://identifiers.org/hgnc/9525
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6463
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1347
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2574
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5222
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3411
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1270
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3309
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2658
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4113
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1704
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6091
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5687
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 894
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3992
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4693
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6499
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49930
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1512
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 862
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2751
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
hgvs: c.64+4A>C
num of homozygotes: 0
population: Other
population: South Asian
population: African
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
reference allele: T
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD

http://identifiers.org/exac.variant/19-43269669-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43269669
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 43269669
    reference: chr 19
allele count: 1
allele frequency: 8.302889405513118e-6
allele num: 120440
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000124467
  ensembl transcript: ENST00000593692
  gene symbol: PSG8
  hgvsc: ENST00000593692.1:n.146+1G>T
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000469979
  ensembl transcript: ENST00000478387
  gene symbol: PSG8
  hgvsc: ENST00000478387.1:c.64+1G>T
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000385869
  ensembl transcript: ENST00000404209
  gene symbol: PSG8
  hgvsc: ENST00000404209.4:c.64+1G>T
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000386090
  ensembl transcript: ENST00000401467
  gene symbol: PSG8
  hgvsc: ENST00000401467.2:c.65-1236G>T
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000385081
  ensembl transcript: ENST00000406636
  gene symbol: PSG8
  hgvsc: ENST00000406636.3:c.64+1G>T
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: true
  consequence: splice_donor_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000305005
  ensembl transcript: ENST00000306511
  gene symbol: PSG8
  hgvsc: ENST00000306511.4:c.64+1G>T
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000124467
  ensembl transcript: ENST00000469260
  gene symbol: PSG8
  hgvsc: ENST00000469260.1:n.150+1G>T
  variant of: http://identifiers.org/hgnc/9525
canonical: true
consequence: splice donor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2575
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3411
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3993
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 895
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6500
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4114
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3307
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1346
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5222
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6464
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1270
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1704
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2672
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6091
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4693
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5686
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 795
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1394
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1512
  bin: 9.25e1
  variant carriers: 0
hgvs: c.64+1G>T
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Latino
population: African
population: South Asian
population: Other
reference allele: C
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: QD

19-43269669-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43269669
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 43269669
    reference: chr 19
allele count: 1
allele frequency: 8.302889405513118e-6
allele num: 120440
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000124467
  ensembl transcript: ENST00000469260
  gene symbol: PSG8
  hgvsc: ENST00000469260.1:n.150+1G>A
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000385869
  ensembl transcript: ENST00000404209
  gene symbol: PSG8
  hgvsc: ENST00000404209.4:c.64+1G>A
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000385081
  ensembl transcript: ENST00000406636
  gene symbol: PSG8
  hgvsc: ENST00000406636.3:c.64+1G>A
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000469979
  ensembl transcript: ENST00000478387
  gene symbol: PSG8
  hgvsc: ENST00000478387.1:c.64+1G>A
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: true
  consequence: splice_donor_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000305005
  ensembl transcript: ENST00000306511
  gene symbol: PSG8
  hgvsc: ENST00000306511.4:c.64+1G>A
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000124467
  ensembl transcript: ENST00000593692
  gene symbol: PSG8
  hgvsc: ENST00000593692.1:n.146+1G>A
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000386090
  ensembl transcript: ENST00000401467
  gene symbol: PSG8
  hgvsc: ENST00000401467.2:c.65-1236G>A
  variant of: http://identifiers.org/hgnc/9525
canonical: true
consequence: splice donor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1346
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1270
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5222
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3411
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4693
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2575
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4114
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6500
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3307
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2672
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6464
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6091
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5686
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3993
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1704
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 895
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1394
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 862
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1512
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2759
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
hgvs: c.64+1G>A
num of homozygotes: 0
population: Other
population: East Asian
population: African
population: South Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ

19-43269677-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43269677
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 43269677
    reference: chr 19
allele count: 1
allele frequency: 8.298479718515568e-6
allele num: 120504
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000386090
  ensembl transcript: ENST00000401467
  gene symbol: PSG8
  hgvsc: ENST00000401467.2:c.65-1244G>C
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000385081
  ensembl transcript: ENST00000406636
  gene symbol: PSG8
  hgvsc: ENST00000406636.3:c.57G>C
  hgvsp: ENST00000406636.3:c.57G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000124467
  ensembl transcript: ENST00000469260
  gene symbol: PSG8
  hgvsc: ENST00000469260.1:n.143G>C
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000305005
  ensembl transcript: ENST00000306511
  gene symbol: PSG8
  hgvsc: ENST00000306511.4:c.57G>C
  hgvsp: ENST00000306511.4:c.57G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000469979
  ensembl transcript: ENST00000478387
  gene symbol: PSG8
  hgvsc: ENST00000478387.1:c.57G>C
  hgvsp: ENST00000478387.1:c.57G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000385869
  ensembl transcript: ENST00000404209
  gene symbol: PSG8
  hgvsc: ENST00000404209.4:c.57G>C
  hgvsp: ENST00000404209.4:c.57G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000124467
  ensembl transcript: ENST00000593692
  gene symbol: PSG8
  hgvsc: ENST00000593692.1:n.139G>C
  variant of: http://identifiers.org/hgnc/9525
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 1384
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1271
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1705
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3992
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2575
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5220
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5689
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3411
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6092
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6500
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4693
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6466
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3312
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 894
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4113
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2682
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1513
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49937
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1258
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Leu19Leu
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: South Asian
population: Other
population: African
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum

http://identifiers.org/exac.variant/19-43269678-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43269678
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 43269678
    reference: chr 19
allele count: 1
allele frequency: 8.297240337863626e-6
allele num: 120522
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000386090
  ensembl transcript: ENST00000401467
  gene symbol: PSG8
  hgvsc: ENST00000401467.2:c.65-1245T>G
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000124467
  ensembl transcript: ENST00000593692
  gene symbol: PSG8
  hgvsc: ENST00000593692.1:n.138T>G
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000124467
  ensembl transcript: ENST00000469260
  gene symbol: PSG8
  hgvsc: ENST00000469260.1:n.142T>G
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000469979
  ensembl transcript: ENST00000478387
  gene symbol: PSG8
  hgvsc: ENST00000478387.1:c.56T>G
  hgvsp: ENSP00000469979.1:p.Leu19Arg
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000385081
  ensembl transcript: ENST00000406636
  gene symbol: PSG8
  hgvsc: ENST00000406636.3:c.56T>G
  hgvsp: ENSP00000385081.3:p.Leu19Arg
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000305005
  ensembl transcript: ENST00000306511
  gene symbol: PSG8
  hgvsc: ENST00000306511.4:c.56T>G
  hgvsp: ENSP00000305005.4:p.Leu19Arg
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000385869
  ensembl transcript: ENST00000404209
  gene symbol: PSG8
  hgvsc: ENST00000404209.4:c.56T>G
  hgvsp: ENSP00000385869.3:p.Leu19Arg
  variant of: http://identifiers.org/hgnc/9525
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5689
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1387
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3411
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3992
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2576
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3311
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6092
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6465
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1271
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5220
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4113
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4693
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2686
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 894
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6500
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1705
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 863
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1406
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 799
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Leu19Arg
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: A
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum

19-43269682-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43269682
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 43269682
    reference: chr 19
allele count: 2
allele frequency: 1.659007581664648e-5
allele num: 120554
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000124467
  ensembl transcript: ENST00000469260
  gene symbol: PSG8
  hgvsc: ENST00000469260.1:n.138C>G
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000305005
  ensembl transcript: ENST00000306511
  gene symbol: PSG8
  hgvsc: ENST00000306511.4:c.52C>G
  hgvsp: ENSP00000305005.4:p.Leu18Val
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000385081
  ensembl transcript: ENST00000406636
  gene symbol: PSG8
  hgvsc: ENST00000406636.3:c.52C>G
  hgvsp: ENSP00000385081.3:p.Leu18Val
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000124467
  ensembl transcript: ENST00000593692
  gene symbol: PSG8
  hgvsc: ENST00000593692.1:n.134C>G
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000386090
  ensembl transcript: ENST00000401467
  gene symbol: PSG8
  hgvsc: ENST00000401467.2:c.65-1249C>G
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000469979
  ensembl transcript: ENST00000478387
  gene symbol: PSG8
  hgvsc: ENST00000478387.1:c.52C>G
  hgvsp: ENSP00000469979.1:p.Leu18Val
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000385869
  ensembl transcript: ENST00000404209
  gene symbol: PSG8
  hgvsc: ENST00000404209.4:c.52C>G
  hgvsp: ENSP00000385869.3:p.Leu18Val
  variant of: http://identifiers.org/hgnc/9525
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5690
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5218
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4695
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6092
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1371
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3308
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1271
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3990
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1704
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2702
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4116
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6501
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2576
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6463
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 895
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3411
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2788
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 862
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1260
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1372
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1512
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1401
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Leu18Val
num of homozygotes: 0
population: African
population: Latino
population: Other
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: ClippingRankSum

19-43269682-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43269682
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 43269682
    reference: chr 19
allele count: 5
allele frequency: 4.147518954161621e-5
allele num: 120554
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000385081
  ensembl transcript: ENST00000406636
  gene symbol: PSG8
  hgvsc: ENST00000406636.3:c.52C>A
  hgvsp: ENSP00000385081.3:p.Leu18Ile
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000305005
  ensembl transcript: ENST00000306511
  gene symbol: PSG8
  hgvsc: ENST00000306511.4:c.52C>A
  hgvsp: ENSP00000305005.4:p.Leu18Ile
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000124467
  ensembl transcript: ENST00000469260
  gene symbol: PSG8
  hgvsc: ENST00000469260.1:n.138C>A
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000385869
  ensembl transcript: ENST00000404209
  gene symbol: PSG8
  hgvsc: ENST00000404209.4:c.52C>A
  hgvsp: ENSP00000385869.3:p.Leu18Ile
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000469979
  ensembl transcript: ENST00000478387
  gene symbol: PSG8
  hgvsc: ENST00000478387.1:c.52C>A
  hgvsp: ENSP00000469979.1:p.Leu18Ile
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000386090
  ensembl transcript: ENST00000401467
  gene symbol: PSG8
  hgvsc: ENST00000401467.2:c.65-1249C>A
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000124467
  ensembl transcript: ENST00000593692
  gene symbol: PSG8
  hgvsc: ENST00000593692.1:n.134C>A
  variant of: http://identifiers.org/hgnc/9525
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2702
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6463
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1371
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6092
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2576
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4116
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3411
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5218
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6501
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4695
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5690
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3308
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1271
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3990
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1704
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 895
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1260
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1401
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 862
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Leu18Ile
num of homozygotes: 0
population: East Asian
population: Other
population: European (Finnish)
population: South Asian
population: Latino
population: European (Non-Finnish)
population: African
reference allele: G
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum

19-43269684-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43269684
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 43269684
    reference: chr 19
allele count: 1
allele frequency: 8.2936619835122e-6
allele num: 120574
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000385869
  ensembl transcript: ENST00000404209
  gene symbol: PSG8
  hgvsc: ENST00000404209.4:c.50G>C
  hgvsp: ENSP00000385869.3:p.Gly17Ala
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000469979
  ensembl transcript: ENST00000478387
  gene symbol: PSG8
  hgvsc: ENST00000478387.1:c.50G>C
  hgvsp: ENSP00000469979.1:p.Gly17Ala
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000124467
  ensembl transcript: ENST00000469260
  gene symbol: PSG8
  hgvsc: ENST00000469260.1:n.136G>C
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000386090
  ensembl transcript: ENST00000401467
  gene symbol: PSG8
  hgvsc: ENST00000401467.2:c.65-1251G>C
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000305005
  ensembl transcript: ENST00000306511
  gene symbol: PSG8
  hgvsc: ENST00000306511.4:c.50G>C
  hgvsp: ENSP00000305005.4:p.Gly17Ala
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000385081
  ensembl transcript: ENST00000406636
  gene symbol: PSG8
  hgvsc: ENST00000406636.3:c.50G>C
  hgvsp: ENSP00000385081.3:p.Gly17Ala
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000124467
  ensembl transcript: ENST00000593692
  gene symbol: PSG8
  hgvsc: ENST00000593692.1:n.132G>C
  variant of: http://identifiers.org/hgnc/9525
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6093
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5690
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3412
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1271
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6462
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3991
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 895
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2707
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3307
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2576
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1368
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1704
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4695
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5219
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6501
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4115
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1404
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 805
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2792
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 862
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1259
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Gly17Ala
num of homozygotes: 0
population: East Asian
population: South Asian
population: Other
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: MQ

http://identifiers.org/exac.variant/19-43269686-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43269686
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 43269686
    reference: chr 19
allele count: 1
allele frequency: 8.291598951941893e-6
allele num: 120604
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000385869
  ensembl transcript: ENST00000404209
  gene symbol: PSG8
  hgvsc: ENST00000404209.4:c.48G>T
  hgvsp: ENSP00000385869.3:p.Lys16Asn
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000469979
  ensembl transcript: ENST00000478387
  gene symbol: PSG8
  hgvsc: ENST00000478387.1:c.48G>T
  hgvsp: ENSP00000469979.1:p.Lys16Asn
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000386090
  ensembl transcript: ENST00000401467
  gene symbol: PSG8
  hgvsc: ENST00000401467.2:c.65-1253G>T
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000124467
  ensembl transcript: ENST00000593692
  gene symbol: PSG8
  hgvsc: ENST00000593692.1:n.130G>T
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000124467
  ensembl transcript: ENST00000469260
  gene symbol: PSG8
  hgvsc: ENST00000469260.1:n.134G>T
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000385081
  ensembl transcript: ENST00000406636
  gene symbol: PSG8
  hgvsc: ENST00000406636.3:c.48G>T
  hgvsp: ENSP00000385081.3:p.Lys16Asn
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000305005
  ensembl transcript: ENST00000306511
  gene symbol: PSG8
  hgvsc: ENST00000306511.4:c.48G>T
  hgvsp: ENSP00000305005.4:p.Lys16Asn
  variant of: http://identifiers.org/hgnc/9525
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3953
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3413
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4691
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3281
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6438
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2687
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1370
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2577
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1715
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 920
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6058
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1284
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4296
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6473
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5174
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5692
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1509
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2777
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Lys16Asn
num of homozygotes: 0
population: Other
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: European (Finnish)
reference allele: C
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: DP

19-43269686-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43269686
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 43269686
    reference: chr 19
allele count: 420
allele frequency: 3.482471559815595e-3
allele num: 120604
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000305005
  ensembl transcript: ENST00000306511
  gene symbol: PSG8
  hgvsc: ENST00000306511.4:c.48G>A
  hgvsp: ENST00000306511.4:c.48G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000124467
  ensembl transcript: ENST00000593692
  gene symbol: PSG8
  hgvsc: ENST00000593692.1:n.130G>A
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000386090
  ensembl transcript: ENST00000401467
  gene symbol: PSG8
  hgvsc: ENST00000401467.2:c.65-1253G>A
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000124467
  ensembl transcript: ENST00000469260
  gene symbol: PSG8
  hgvsc: ENST00000469260.1:n.134G>A
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000385869
  ensembl transcript: ENST00000404209
  gene symbol: PSG8
  hgvsc: ENST00000404209.4:c.48G>A
  hgvsp: ENST00000404209.4:c.48G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000385081
  ensembl transcript: ENST00000406636
  gene symbol: PSG8
  hgvsc: ENST00000406636.3:c.48G>A
  hgvsp: ENST00000406636.3:c.48G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000469979
  ensembl transcript: ENST00000478387
  gene symbol: PSG8
  hgvsc: ENST00000478387.1:c.48G>A
  hgvsp: ENST00000478387.1:c.48G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9525
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4691
  bin: 6.75e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 6438
  bin: 5.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1284
  bin: 8.75e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 1.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 6473
  bin: 5.25e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 3281
  bin: 3.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 2577
  bin: 7.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 1.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 5692
  bin: 6.25e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 1370
  bin: 2.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2687
  bin: 2.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 920
  bin: 9.25e1
  variant carriers: 27
genotype depth: GenotypeDepth
  all individuals: 4296
  bin: 9.75e1
  variant carriers: 209
genotype depth: GenotypeDepth
  all individuals: 6058
  bin: 4.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 5174
  bin: 4.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 3953
  bin: 3.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 3413
  bin: 7.25e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 1715
  bin: 8.25e1
  variant carriers: 17
genotype quality: GenotypeQuality
  all individuals: 50035
  bin: 9.75e1
  variant carriers: 404
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1355
  bin: 8.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1509
  bin: 9.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 1245
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Lys16Lys
num of homozygotes: 12
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Latino
population: African
population: Other
population: European (Finnish)
reference allele: C
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum

19-43269692-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43269692
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 43269692
    reference: chr 19
allele count: 1
allele frequency: 8.288300235387727e-6
allele num: 120652
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000385081
  ensembl transcript: ENST00000406636
  gene symbol: PSG8
  hgvsc: ENST00000406636.3:c.42C>A
  hgvsp: ENST00000406636.3:c.42C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000386090
  ensembl transcript: ENST00000401467
  gene symbol: PSG8
  hgvsc: ENST00000401467.2:c.65-1259C>A
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000124467
  ensembl transcript: ENST00000593692
  gene symbol: PSG8
  hgvsc: ENST00000593692.1:n.124C>A
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000124467
  ensembl transcript: ENST00000469260
  gene symbol: PSG8
  hgvsc: ENST00000469260.1:n.128C>A
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000305005
  ensembl transcript: ENST00000306511
  gene symbol: PSG8
  hgvsc: ENST00000306511.4:c.42C>A
  hgvsp: ENST00000306511.4:c.42C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000469979
  ensembl transcript: ENST00000478387
  gene symbol: PSG8
  hgvsc: ENST00000478387.1:c.42C>A
  hgvsp: ENST00000478387.1:c.42C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000385869
  ensembl transcript: ENST00000404209
  gene symbol: PSG8
  hgvsc: ENST00000404209.4:c.42C>A
  hgvsp: ENST00000404209.4:c.42C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9525
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4693
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2580
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3952
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2694
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3288
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5686
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3414
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1386
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 915
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1715
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6467
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6057
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5179
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6446
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4299
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1280
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 860
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49993
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Thr14Thr
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Other
population: African
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum

19-43269693-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43269693
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 43269693
    reference: chr 19
allele count: 8
allele frequency: 6.63075010360547e-5
allele num: 120650
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000469979
  ensembl transcript: ENST00000478387
  gene symbol: PSG8
  hgvsc: ENST00000478387.1:c.41C>G
  hgvsp: ENSP00000469979.1:p.Thr14Ser
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000124467
  ensembl transcript: ENST00000469260
  gene symbol: PSG8
  hgvsc: ENST00000469260.1:n.127C>G
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000386090
  ensembl transcript: ENST00000401467
  gene symbol: PSG8
  hgvsc: ENST00000401467.2:c.65-1260C>G
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000385081
  ensembl transcript: ENST00000406636
  gene symbol: PSG8
  hgvsc: ENST00000406636.3:c.41C>G
  hgvsp: ENSP00000385081.3:p.Thr14Ser
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000305005
  ensembl transcript: ENST00000306511
  gene symbol: PSG8
  hgvsc: ENST00000306511.4:c.41C>G
  hgvsp: ENSP00000305005.4:p.Thr14Ser
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000124467
  ensembl transcript: ENST00000593692
  gene symbol: PSG8
  hgvsc: ENST00000593692.1:n.123C>G
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000385869
  ensembl transcript: ENST00000404209
  gene symbol: PSG8
  hgvsc: ENST00000404209.4:c.41C>G
  hgvsp: ENSP00000385869.3:p.Thr14Ser
  variant of: http://identifiers.org/hgnc/9525
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3413
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1383
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2675
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6445
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5686
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3956
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5177
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3307
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1716
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6057
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4693
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6466
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1280
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 916
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2579
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4303
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 95
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 360
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 804
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Thr14Ser
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: East Asian
population: South Asian
population: Other
population: Latino
reference allele: G
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: QD

19-43269693-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43269693
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 43269693
    reference: chr 19
allele count: 1
allele frequency: 8.288437629506838e-6
allele num: 120650
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000124467
  ensembl transcript: ENST00000469260
  gene symbol: PSG8
  hgvsc: ENST00000469260.1:n.127C>A
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000386090
  ensembl transcript: ENST00000401467
  gene symbol: PSG8
  hgvsc: ENST00000401467.2:c.65-1260C>A
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000469979
  ensembl transcript: ENST00000478387
  gene symbol: PSG8
  hgvsc: ENST00000478387.1:c.41C>A
  hgvsp: ENSP00000469979.1:p.Thr14Asn
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000385869
  ensembl transcript: ENST00000404209
  gene symbol: PSG8
  hgvsc: ENST00000404209.4:c.41C>A
  hgvsp: ENSP00000385869.3:p.Thr14Asn
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000124467
  ensembl transcript: ENST00000593692
  gene symbol: PSG8
  hgvsc: ENST00000593692.1:n.123C>A
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000305005
  ensembl transcript: ENST00000306511
  gene symbol: PSG8
  hgvsc: ENST00000306511.4:c.41C>A
  hgvsp: ENSP00000305005.4:p.Thr14Asn
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000385081
  ensembl transcript: ENST00000406636
  gene symbol: PSG8
  hgvsc: ENST00000406636.3:c.41C>A
  hgvsp: ENSP00000385081.3:p.Thr14Asn
  variant of: http://identifiers.org/hgnc/9525
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5177
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2675
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6057
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 916
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4303
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3307
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1383
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2579
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6445
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6466
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1280
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3413
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3956
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5686
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4693
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1716
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 860
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 360
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1355
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1507
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1244
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Thr14Asn
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: South Asian
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP

19-43269698-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43269698
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 43269698
    reference: chr 19
allele count: 5
allele frequency: 4.142913959962879e-5
allele num: 120688
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000386090
  ensembl transcript: ENST00000401467
  gene symbol: PSG8
  hgvsc: ENST00000401467.2:c.65-1265C>G
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000124467
  ensembl transcript: ENST00000469260
  gene symbol: PSG8
  hgvsc: ENST00000469260.1:n.122C>G
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000385869
  ensembl transcript: ENST00000404209
  gene symbol: PSG8
  hgvsc: ENST00000404209.4:c.36C>G
  hgvsp: ENST00000404209.4:c.36C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000385081
  ensembl transcript: ENST00000406636
  gene symbol: PSG8
  hgvsc: ENST00000406636.3:c.36C>G
  hgvsp: ENST00000406636.3:c.36C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000469979
  ensembl transcript: ENST00000478387
  gene symbol: PSG8
  hgvsc: ENST00000478387.1:c.36C>G
  hgvsp: ENST00000478387.1:c.36C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000124467
  ensembl transcript: ENST00000593692
  gene symbol: PSG8
  hgvsc: ENST00000593692.1:n.118C>G
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000305005
  ensembl transcript: ENST00000306511
  gene symbol: PSG8
  hgvsc: ENST00000306511.4:c.36C>G
  hgvsp: ENST00000306511.4:c.36C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9525
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 916
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5686
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1716
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6445
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3314
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1379
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3413
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3968
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4694
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2580
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6060
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5177
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2672
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4303
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6466
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1280
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1508
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1399
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 346
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Arg12Arg
num of homozygotes: 0
population: Other
population: East Asian
population: African
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Latino
reference allele: G
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: InbreedingCoeff

http://identifiers.org/exac.variant/19-43269699-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43269699
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 43269699
    reference: chr 19
allele count: 3
allele frequency: 2.483608185972581e-5
allele num: 120792
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000385869
  ensembl transcript: ENST00000404209
  gene symbol: PSG8
  hgvsc: ENST00000404209.4:c.35G>T
  hgvsp: ENSP00000385869.3:p.Arg12Leu
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000305005
  ensembl transcript: ENST00000306511
  gene symbol: PSG8
  hgvsc: ENST00000306511.4:c.35G>T
  hgvsp: ENSP00000305005.4:p.Arg12Leu
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000124467
  ensembl transcript: ENST00000469260
  gene symbol: PSG8
  hgvsc: ENST00000469260.1:n.121G>T
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000469979
  ensembl transcript: ENST00000478387
  gene symbol: PSG8
  hgvsc: ENST00000478387.1:c.35G>T
  hgvsp: ENSP00000469979.1:p.Arg12Leu
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000124467
  ensembl transcript: ENST00000593692
  gene symbol: PSG8
  hgvsc: ENST00000593692.1:n.117G>T
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000385081
  ensembl transcript: ENST00000406636
  gene symbol: PSG8
  hgvsc: ENST00000406636.3:c.35G>T
  hgvsp: ENSP00000385081.3:p.Arg12Leu
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000386090
  ensembl transcript: ENST00000401467
  gene symbol: PSG8
  hgvsc: ENST00000401467.2:c.65-1266G>T
  variant of: http://identifiers.org/hgnc/9525
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3639
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3584
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2092
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 806
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1863
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1653
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2185
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1501
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1734
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3229
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3730
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23253
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3230
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2763
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2634
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2200
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 975
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53639
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Arg12Leu
num of homozygotes: 0
population: South Asian
population: Other
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: QD

19-43269699-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43269699
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 43269699
    reference: chr 19
allele count: 36225
allele frequency: 2.998956884561891e-1
allele num: 120792
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000386090
  ensembl transcript: ENST00000401467
  gene symbol: PSG8
  hgvsc: ENST00000401467.2:c.65-1266G>A
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000124467
  ensembl transcript: ENST00000593692
  gene symbol: PSG8
  hgvsc: ENST00000593692.1:n.117G>A
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000385869
  ensembl transcript: ENST00000404209
  gene symbol: PSG8
  hgvsc: ENST00000404209.4:c.35G>A
  hgvsp: ENSP00000385869.3:p.Arg12His
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000305005
  ensembl transcript: ENST00000306511
  gene symbol: PSG8
  hgvsc: ENST00000306511.4:c.35G>A
  hgvsp: ENSP00000305005.4:p.Arg12His
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000469979
  ensembl transcript: ENST00000478387
  gene symbol: PSG8
  hgvsc: ENST00000478387.1:c.35G>A
  hgvsp: ENSP00000469979.1:p.Arg12His
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000385081
  ensembl transcript: ENST00000406636
  gene symbol: PSG8
  hgvsc: ENST00000406636.3:c.35G>A
  hgvsp: ENSP00000385081.3:p.Arg12His
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000124467
  ensembl transcript: ENST00000469260
  gene symbol: PSG8
  hgvsc: ENST00000469260.1:n.121G>A
  variant of: http://identifiers.org/hgnc/9525
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2185
  bin: 7.75e1
  variant carriers: 810
genotype depth: GenotypeDepth
  all individuals: 3584
  bin: 5.25e1
  variant carriers: 439
genotype depth: GenotypeDepth
  all individuals: 2092
  bin: 3.25e1
  variant carriers: 266
genotype depth: GenotypeDepth
  all individuals: 2634
  bin: 7.25e1
  variant carriers: 770
genotype depth: GenotypeDepth
  all individuals: 2763
  bin: 4.25e1
  variant carriers: 367
genotype depth: GenotypeDepth
  all individuals: 806
  bin: 2.25e1
  variant carriers: 154
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 7.5e0
  variant carriers: 55
genotype depth: GenotypeDepth
  all individuals: 2200
  bin: 3.75e1
  variant carriers: 299
genotype depth: GenotypeDepth
  all individuals: 1501
  bin: 9.25e1
  variant carriers: 1079
genotype depth: GenotypeDepth
  all individuals: 23253
  bin: 9.75e1
  variant carriers: 21346
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 2.5e0
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 1.75e1
  variant carriers: 163
genotype depth: GenotypeDepth
  all individuals: 3730
  bin: 5.75e1
  variant carriers: 475
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 1.25e1
  variant carriers: 110
genotype depth: GenotypeDepth
  all individuals: 3230
  bin: 6.75e1
  variant carriers: 623
genotype depth: GenotypeDepth
  all individuals: 1734
  bin: 8.25e1
  variant carriers: 890
genotype depth: GenotypeDepth
  all individuals: 3639
  bin: 6.25e1
  variant carriers: 587
genotype depth: GenotypeDepth
  all individuals: 3229
  bin: 4.75e1
  variant carriers: 386
genotype depth: GenotypeDepth
  all individuals: 1863
  bin: 2.75e1
  variant carriers: 210
genotype depth: GenotypeDepth
  all individuals: 1653
  bin: 8.75e1
  variant carriers: 1035
genotype quality: GenotypeQuality
  all individuals: 195
  bin: 2.25e1
  variant carriers: 23
genotype quality: GenotypeQuality
  all individuals: 487
  bin: 8.75e1
  variant carriers: 47
genotype quality: GenotypeQuality
  all individuals: 785
  bin: 7.75e1
  variant carriers: 32
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 3.25e1
  variant carriers: 27
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 2.5e0
  variant carriers: 10
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 3.75e1
  variant carriers: 29
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 7.5e0
  variant carriers: 18
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 1.25e1
  variant carriers: 17
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 4.75e1
  variant carriers: 29
hgvs: p.Arg12His
num of homozygotes: 6270
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
population: South Asian
population: Other
population: European (Finnish)
reference allele: C
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum

19-43269700-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43269700
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 43269700
    reference: chr 19
allele count: 71
allele frequency: 5.870679675872334e-4
allele num: 120940
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000385869
  ensembl transcript: ENST00000404209
  gene symbol: PSG8
  hgvsc: ENST00000404209.4:c.34C>T
  hgvsp: ENSP00000385869.3:p.Arg12Cys
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000385081
  ensembl transcript: ENST00000406636
  gene symbol: PSG8
  hgvsc: ENST00000406636.3:c.34C>T
  hgvsp: ENSP00000385081.3:p.Arg12Cys
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000305005
  ensembl transcript: ENST00000306511
  gene symbol: PSG8
  hgvsc: ENST00000306511.4:c.34C>T
  hgvsp: ENSP00000305005.4:p.Arg12Cys
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000469979
  ensembl transcript: ENST00000478387
  gene symbol: PSG8
  hgvsc: ENST00000478387.1:c.34C>T
  hgvsp: ENSP00000469979.1:p.Arg12Cys
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000386090
  ensembl transcript: ENST00000401467
  gene symbol: PSG8
  hgvsc: ENST00000401467.2:c.65-1267C>T
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000124467
  ensembl transcript: ENST00000593692
  gene symbol: PSG8
  hgvsc: ENST00000593692.1:n.116C>T
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000124467
  ensembl transcript: ENST00000469260
  gene symbol: PSG8
  hgvsc: ENST00000469260.1:n.120C>T
  variant of: http://identifiers.org/hgnc/9525
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2207
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1632
  bin: 8.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 1497
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3262
  bin: 6.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 23227
  bin: 9.75e1
  variant carriers: 36
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1870
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2202
  bin: 7.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2772
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3766
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2612
  bin: 7.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2110
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3620
  bin: 6.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 3574
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 811
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3231
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1696
  bin: 8.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 871
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 518
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Arg12Cys
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Other
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: QD

19-43269701-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43269701
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 43269701
    reference: chr 19
allele count: 3
allele frequency: 2.480568877129155e-5
allele num: 120940
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000124467
  ensembl transcript: ENST00000593692
  gene symbol: PSG8
  hgvsc: ENST00000593692.1:n.115G>C
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000124467
  ensembl transcript: ENST00000469260
  gene symbol: PSG8
  hgvsc: ENST00000469260.1:n.119G>C
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000469979
  ensembl transcript: ENST00000478387
  gene symbol: PSG8
  hgvsc: ENST00000478387.1:c.33G>C
  hgvsp: ENSP00000469979.1:p.Gln11His
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000385081
  ensembl transcript: ENST00000406636
  gene symbol: PSG8
  hgvsc: ENST00000406636.3:c.33G>C
  hgvsp: ENSP00000385081.3:p.Gln11His
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000386090
  ensembl transcript: ENST00000401467
  gene symbol: PSG8
  hgvsc: ENST00000401467.2:c.65-1268G>C
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000305005
  ensembl transcript: ENST00000306511
  gene symbol: PSG8
  hgvsc: ENST00000306511.4:c.33G>C
  hgvsp: ENSP00000305005.4:p.Gln11His
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000385869
  ensembl transcript: ENST00000404209
  gene symbol: PSG8
  hgvsc: ENST00000404209.4:c.33G>C
  hgvsp: ENSP00000385869.3:p.Gln11His
  variant of: http://identifiers.org/hgnc/9525
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 3263
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1496
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3575
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2611
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3775
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3232
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2115
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2774
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2208
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 813
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2198
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1628
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3620
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23207
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1886
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1693
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 948
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52988
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 940
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Gln11His
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: Latino
population: African
population: European (Finnish)
population: South Asian
population: East Asian
reference allele: C
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum

19-43269703-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43269703
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 43269703
    reference: chr 19
allele count: 5
allele frequency: 4.134144728138642e-5
allele num: 120944
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000386090
  ensembl transcript: ENST00000401467
  gene symbol: PSG8
  hgvsc: ENST00000401467.2:c.65-1270C>T
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000385869
  ensembl transcript: ENST00000404209
  gene symbol: PSG8
  hgvsc: ENST00000404209.4:c.31C>T
  hgvsp: ENSP00000385869.3:p.Gln11Ter
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000124467
  ensembl transcript: ENST00000469260
  gene symbol: PSG8
  hgvsc: ENST00000469260.1:n.117C>T
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000124467
  ensembl transcript: ENST00000593692
  gene symbol: PSG8
  hgvsc: ENST00000593692.1:n.113C>T
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000305005
  ensembl transcript: ENST00000306511
  gene symbol: PSG8
  hgvsc: ENST00000306511.4:c.31C>T
  hgvsp: ENSP00000305005.4:p.Gln11Ter
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000385081
  ensembl transcript: ENST00000406636
  gene symbol: PSG8
  hgvsc: ENST00000406636.3:c.31C>T
  hgvsp: ENSP00000385081.3:p.Gln11Ter
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: stop_gained
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000469979
  ensembl transcript: ENST00000478387
  gene symbol: PSG8
  hgvsc: ENST00000478387.1:c.31C>T
  hgvsp: ENSP00000469979.1:p.Gln11Ter
  variant of: http://identifiers.org/hgnc/9525
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 817
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3575
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3775
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3233
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1498
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2207
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3620
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1627
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2775
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2611
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23208
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2111
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2197
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3263
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1692
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1890
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 575
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2095
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 938
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Gln11Ter
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Finnish)
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum

19-43269704-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43269704
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 43269704
    reference: chr 19
allele count: 38373
allele frequency: 3.175994438099022e-1
allele num: 120822
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000124467
  ensembl transcript: ENST00000593692
  gene symbol: PSG8
  hgvsc: ENST00000593692.1:n.112A>G
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000385869
  ensembl transcript: ENST00000404209
  gene symbol: PSG8
  hgvsc: ENST00000404209.4:c.30A>G
  hgvsp: ENST00000404209.4:c.30A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000124467
  ensembl transcript: ENST00000469260
  gene symbol: PSG8
  hgvsc: ENST00000469260.1:n.116A>G
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000386090
  ensembl transcript: ENST00000401467
  gene symbol: PSG8
  hgvsc: ENST00000401467.2:c.65-1271A>G
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000469979
  ensembl transcript: ENST00000478387
  gene symbol: PSG8
  hgvsc: ENST00000478387.1:c.30A>G
  hgvsp: ENST00000478387.1:c.30A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000305005
  ensembl transcript: ENST00000306511
  gene symbol: PSG8
  hgvsc: ENST00000306511.4:c.30A>G
  hgvsp: ENST00000306511.4:c.30A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000385081
  ensembl transcript: ENST00000406636
  gene symbol: PSG8
  hgvsc: ENST00000406636.3:c.30A>G
  hgvsp: ENST00000406636.3:c.30A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9525
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3097
  bin: 6.75e1
  variant carriers: 632
genotype depth: GenotypeDepth
  all individuals: 2623
  bin: 4.25e1
  variant carriers: 344
genotype depth: GenotypeDepth
  all individuals: 2051
  bin: 3.25e1
  variant carriers: 265
genotype depth: GenotypeDepth
  all individuals: 3436
  bin: 5.25e1
  variant carriers: 449
genotype depth: GenotypeDepth
  all individuals: 1569
  bin: 8.75e1
  variant carriers: 998
genotype depth: GenotypeDepth
  all individuals: 2094
  bin: 7.75e1
  variant carriers: 809
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 7.5e0
  variant carriers: 43
genotype depth: GenotypeDepth
  all individuals: 1841
  bin: 2.75e1
  variant carriers: 220
genotype depth: GenotypeDepth
  all individuals: 3622
  bin: 5.75e1
  variant carriers: 537
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 1.25e1
  variant carriers: 117
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 2.5e0
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 811
  bin: 2.25e1
  variant carriers: 164
genotype depth: GenotypeDepth
  all individuals: 2153
  bin: 3.75e1
  variant carriers: 332
genotype depth: GenotypeDepth
  all individuals: 3094
  bin: 4.75e1
  variant carriers: 394
genotype depth: GenotypeDepth
  all individuals: 1667
  bin: 8.25e1
  variant carriers: 878
genotype depth: GenotypeDepth
  all individuals: 24668
  bin: 9.75e1
  variant carriers: 22847
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 1.75e1
  variant carriers: 165
genotype depth: GenotypeDepth
  all individuals: 1465
  bin: 9.25e1
  variant carriers: 1069
genotype depth: GenotypeDepth
  all individuals: 3447
  bin: 6.25e1
  variant carriers: 558
genotype depth: GenotypeDepth
  all individuals: 2475
  bin: 7.25e1
  variant carriers: 727
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 3.25e1
  variant carriers: 27
genotype quality: GenotypeQuality
  all individuals: 954
  bin: 6.75e1
  variant carriers: 45
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 1.75e1
  variant carriers: 23
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 5.75e1
  variant carriers: 41
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 4.75e1
  variant carriers: 35
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 1.25e1
  variant carriers: 17
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 3.75e1
  variant carriers: 35
genotype quality: GenotypeQuality
  all individuals: 512
  bin: 7.25e1
  variant carriers: 23
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 7.5e0
  variant carriers: 24
hgvs: p.Thr10Thr
num of homozygotes: 6925
population: European (Non-Finnish)
population: Other
population: African
population: South Asian
population: Latino
population: European (Finnish)
population: East Asian
reference allele: T
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum

19-43269705-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43269705
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 43269705
    reference: chr 19
allele count: 36206
allele frequency: 2.996540479698078e-1
allele num: 120826
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000124467
  ensembl transcript: ENST00000469260
  gene symbol: PSG8
  hgvsc: ENST00000469260.1:n.115C>T
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000386090
  ensembl transcript: ENST00000401467
  gene symbol: PSG8
  hgvsc: ENST00000401467.2:c.65-1272C>T
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000469979
  ensembl transcript: ENST00000478387
  gene symbol: PSG8
  hgvsc: ENST00000478387.1:c.29C>T
  hgvsp: ENSP00000469979.1:p.Thr10Ile
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000385869
  ensembl transcript: ENST00000404209
  gene symbol: PSG8
  hgvsc: ENST00000404209.4:c.29C>T
  hgvsp: ENSP00000385869.3:p.Thr10Ile
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000305005
  ensembl transcript: ENST00000306511
  gene symbol: PSG8
  hgvsc: ENST00000306511.4:c.29C>T
  hgvsp: ENSP00000305005.4:p.Thr10Ile
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000385081
  ensembl transcript: ENST00000406636
  gene symbol: PSG8
  hgvsc: ENST00000406636.3:c.29C>T
  hgvsp: ENSP00000385081.3:p.Thr10Ile
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000124467
  ensembl transcript: ENST00000593692
  gene symbol: PSG8
  hgvsc: ENST00000593692.1:n.111C>T
  variant of: http://identifiers.org/hgnc/9525
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3753
  bin: 5.75e1
  variant carriers: 523
genotype depth: GenotypeDepth
  all individuals: 2533
  bin: 7.25e1
  variant carriers: 693
genotype depth: GenotypeDepth
  all individuals: 3556
  bin: 6.25e1
  variant carriers: 519
genotype depth: GenotypeDepth
  all individuals: 3227
  bin: 4.75e1
  variant carriers: 380
genotype depth: GenotypeDepth
  all individuals: 3192
  bin: 6.75e1
  variant carriers: 608
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 1.75e1
  variant carriers: 159
genotype depth: GenotypeDepth
  all individuals: 23648
  bin: 9.75e1
  variant carriers: 21726
genotype depth: GenotypeDepth
  all individuals: 1442
  bin: 9.25e1
  variant carriers: 1018
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 2.5e0
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 1964
  bin: 2.75e1
  variant carriers: 223
genotype depth: GenotypeDepth
  all individuals: 2719
  bin: 4.25e1
  variant carriers: 337
genotype depth: GenotypeDepth
  all individuals: 2093
  bin: 7.75e1
  variant carriers: 748
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 1.25e1
  variant carriers: 115
genotype depth: GenotypeDepth
  all individuals: 1523
  bin: 8.75e1
  variant carriers: 925
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 7.5e0
  variant carriers: 43
genotype depth: GenotypeDepth
  all individuals: 1688
  bin: 8.25e1
  variant carriers: 849
genotype depth: GenotypeDepth
  all individuals: 833
  bin: 2.25e1
  variant carriers: 157
genotype depth: GenotypeDepth
  all individuals: 2172
  bin: 3.25e1
  variant carriers: 265
genotype depth: GenotypeDepth
  all individuals: 2219
  bin: 3.75e1
  variant carriers: 315
genotype depth: GenotypeDepth
  all individuals: 3558
  bin: 5.25e1
  variant carriers: 442
genotype quality: GenotypeQuality
  all individuals: 867
  bin: 8.25e1
  variant carriers: 53
genotype quality: GenotypeQuality
  all individuals: 805
  bin: 7.75e1
  variant carriers: 32
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 3.25e1
  variant carriers: 26
genotype quality: GenotypeQuality
  all individuals: 503
  bin: 8.75e1
  variant carriers: 50
genotype quality: GenotypeQuality
  all individuals: 191
  bin: 2.25e1
  variant carriers: 27
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 5.75e1
  variant carriers: 32
genotype quality: GenotypeQuality
  all individuals: 918
  bin: 9.25e1
  variant carriers: 68
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 1.25e1
  variant carriers: 18
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 7.5e0
  variant carriers: 18
hgvs: p.Thr10Ile
num of homozygotes: 6263
population: East Asian
population: African
population: European (Finnish)
population: South Asian
population: Other
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: QD

http://identifiers.org/exac.variant/19-43269708-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43269708
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 43269708
    reference: chr 19
allele count: 1
allele frequency: 8.274720728175424e-6
allele num: 120850
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000386090
  ensembl transcript: ENST00000401467
  gene symbol: PSG8
  hgvsc: ENST00000401467.2:c.65-1275G>T
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000305005
  ensembl transcript: ENST00000306511
  gene symbol: PSG8
  hgvsc: ENST00000306511.4:c.26G>T
  hgvsp: ENSP00000305005.4:p.Cys9Phe
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000385869
  ensembl transcript: ENST00000404209
  gene symbol: PSG8
  hgvsc: ENST00000404209.4:c.26G>T
  hgvsp: ENSP00000385869.3:p.Cys9Phe
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000385081
  ensembl transcript: ENST00000406636
  gene symbol: PSG8
  hgvsc: ENST00000406636.3:c.26G>T
  hgvsp: ENSP00000385081.3:p.Cys9Phe
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000124467
  ensembl transcript: ENST00000593692
  gene symbol: PSG8
  hgvsc: ENST00000593692.1:n.108G>T
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000124467
  ensembl transcript: ENST00000469260
  gene symbol: PSG8
  hgvsc: ENST00000469260.1:n.112G>T
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000469979
  ensembl transcript: ENST00000478387
  gene symbol: PSG8
  hgvsc: ENST00000478387.1:c.26G>T
  hgvsp: ENSP00000469979.1:p.Cys9Phe
  variant of: http://identifiers.org/hgnc/9525
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1236
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 945
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4831
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1152
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6219
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3469
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3804
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2571
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3467
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4892
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6133
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5638
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3715
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5721
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4671
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1648
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1723
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4236
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1945
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Cys9Phe
num of homozygotes: 0
population: African
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: Other
population: East Asian
reference allele: C
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD

19-43269711-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43269711
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 43269711
    reference: chr 19
allele count: 13
allele frequency: 1.075589091871856e-4
allele num: 120864
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000469979
  ensembl transcript: ENST00000478387
  gene symbol: PSG8
  hgvsc: ENST00000478387.1:c.23C>T
  hgvsp: ENSP00000469979.1:p.Pro8Leu
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000124467
  ensembl transcript: ENST00000593692
  gene symbol: PSG8
  hgvsc: ENST00000593692.1:n.105C>T
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000305005
  ensembl transcript: ENST00000306511
  gene symbol: PSG8
  hgvsc: ENST00000306511.4:c.23C>T
  hgvsp: ENSP00000305005.4:p.Pro8Leu
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000386090
  ensembl transcript: ENST00000401467
  gene symbol: PSG8
  hgvsc: ENST00000401467.2:c.65-1278C>T
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000385081
  ensembl transcript: ENST00000406636
  gene symbol: PSG8
  hgvsc: ENST00000406636.3:c.23C>T
  hgvsp: ENSP00000385081.3:p.Pro8Leu
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000385869
  ensembl transcript: ENST00000404209
  gene symbol: PSG8
  hgvsc: ENST00000404209.4:c.23C>T
  hgvsp: ENSP00000385869.3:p.Pro8Leu
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000124467
  ensembl transcript: ENST00000469260
  gene symbol: PSG8
  hgvsc: ENST00000469260.1:n.109C>T
  variant of: http://identifiers.org/hgnc/9525
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1648
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1163
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6219
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6134
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3714
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5638
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2571
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1236
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3472
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3805
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4671
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5721
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4831
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4891
  bin: 9.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 3467
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 945
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1945
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1631
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 290
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 981
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 925
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Pro8Leu
num of homozygotes: 0
population: Other
population: European (Finnish)
population: African
population: East Asian
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD

19-43269725-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43269725
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 43269725
    reference: chr 19
allele count: 1
allele frequency: 8.273077750384698e-6
allele num: 120874
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000385081
  ensembl transcript: ENST00000406636
  gene symbol: PSG8
  hgvsc: ENST00000406636.3:c.9C>T
  hgvsp: ENST00000406636.3:c.9C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000386090
  ensembl transcript: ENST00000401467
  gene symbol: PSG8
  hgvsc: ENST00000401467.2:c.65-1292C>T
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000124467
  ensembl transcript: ENST00000593692
  gene symbol: PSG8
  hgvsc: ENST00000593692.1:n.91C>T
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000469979
  ensembl transcript: ENST00000478387
  gene symbol: PSG8
  hgvsc: ENST00000478387.1:c.9C>T
  hgvsp: ENST00000478387.1:c.9C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000305005
  ensembl transcript: ENST00000306511
  gene symbol: PSG8
  hgvsc: ENST00000306511.4:c.9C>T
  hgvsp: ENST00000306511.4:c.9C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000124467
  ensembl transcript: ENST00000469260
  gene symbol: PSG8
  hgvsc: ENST00000469260.1:n.95C>T
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000385869
  ensembl transcript: ENST00000404209
  gene symbol: PSG8
  hgvsc: ENST00000404209.4:c.9C>T
  hgvsp: ENST00000404209.4:c.9C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9525
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3478
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6217
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3710
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6137
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4888
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1150
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5720
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1648
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3803
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4827
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5638
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4669
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3467
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 944
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1236
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2570
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1719
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2012
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46589
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Leu3Leu
num of homozygotes: 0
population: Other
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: African
population: East Asian
reference allele: G
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD

19-43269725-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43269725
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 43269725
    reference: chr 19
allele count: 3
allele frequency: 2.481923325115409e-5
allele num: 120874
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000385081
  ensembl transcript: ENST00000406636
  gene symbol: PSG8
  hgvsc: ENST00000406636.3:c.9C>G
  hgvsp: ENST00000406636.3:c.9C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000305005
  ensembl transcript: ENST00000306511
  gene symbol: PSG8
  hgvsc: ENST00000306511.4:c.9C>G
  hgvsp: ENST00000306511.4:c.9C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000124467
  ensembl transcript: ENST00000593692
  gene symbol: PSG8
  hgvsc: ENST00000593692.1:n.91C>G
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000469979
  ensembl transcript: ENST00000478387
  gene symbol: PSG8
  hgvsc: ENST00000478387.1:c.9C>G
  hgvsp: ENST00000478387.1:c.9C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000386090
  ensembl transcript: ENST00000401467
  gene symbol: PSG8
  hgvsc: ENST00000401467.2:c.65-1292C>G
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000124467
  ensembl transcript: ENST00000469260
  gene symbol: PSG8
  hgvsc: ENST00000469260.1:n.95C>G
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000385869
  ensembl transcript: ENST00000404209
  gene symbol: PSG8
  hgvsc: ENST00000404209.4:c.9C>G
  hgvsp: ENST00000404209.4:c.9C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9525
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5720
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3467
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4888
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4827
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6137
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1236
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3710
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4669
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 944
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1648
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3803
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2570
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5638
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6217
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1150
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3478
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 928
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1944
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46589
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1615
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Leu3Leu
num of homozygotes: 0
population: East Asian
population: African
population: European (Finnish)
population: South Asian
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ

19-43269726-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43269726
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 43269726
    reference: chr 19
allele count: 11
allele frequency: 9.100234951520567e-5
allele num: 120876
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000124467
  ensembl transcript: ENST00000593692
  gene symbol: PSG8
  hgvsc: ENST00000593692.1:n.90T>C
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000386090
  ensembl transcript: ENST00000401467
  gene symbol: PSG8
  hgvsc: ENST00000401467.2:c.65-1293T>C
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000385081
  ensembl transcript: ENST00000406636
  gene symbol: PSG8
  hgvsc: ENST00000406636.3:c.8T>C
  hgvsp: ENSP00000385081.3:p.Leu3Pro
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000469979
  ensembl transcript: ENST00000478387
  gene symbol: PSG8
  hgvsc: ENST00000478387.1:c.8T>C
  hgvsp: ENSP00000469979.1:p.Leu3Pro
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000305005
  ensembl transcript: ENST00000306511
  gene symbol: PSG8
  hgvsc: ENST00000306511.4:c.8T>C
  hgvsp: ENSP00000305005.4:p.Leu3Pro
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000124467
  ensembl transcript: ENST00000469260
  gene symbol: PSG8
  hgvsc: ENST00000469260.1:n.94T>C
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000385869
  ensembl transcript: ENST00000404209
  gene symbol: PSG8
  hgvsc: ENST00000404209.4:c.8T>C
  hgvsp: ENSP00000385869.3:p.Leu3Pro
  variant of: http://identifiers.org/hgnc/9525
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 1150
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6218
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4889
  bin: 9.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 944
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1234
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4828
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3804
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6136
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5638
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3709
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1648
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4671
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3464
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5722
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3480
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2569
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 317
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1616
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 979
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4286
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46587
  bin: 9.75e1
  variant carriers: 10
hgvs: p.Leu3Pro
num of homozygotes: 0
population: African
population: Other
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Latino
population: European (Finnish)
reference allele: A
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum

19-43269726-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43269726
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 43269726
    reference: chr 19
allele count: 1
allele frequency: 8.272940865018697e-6
allele num: 120876
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000469979
  ensembl transcript: ENST00000478387
  gene symbol: PSG8
  hgvsc: ENST00000478387.1:c.8T>A
  hgvsp: ENSP00000469979.1:p.Leu3His
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000385081
  ensembl transcript: ENST00000406636
  gene symbol: PSG8
  hgvsc: ENST00000406636.3:c.8T>A
  hgvsp: ENSP00000385081.3:p.Leu3His
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000305005
  ensembl transcript: ENST00000306511
  gene symbol: PSG8
  hgvsc: ENST00000306511.4:c.8T>A
  hgvsp: ENSP00000305005.4:p.Leu3His
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000386090
  ensembl transcript: ENST00000401467
  gene symbol: PSG8
  hgvsc: ENST00000401467.2:c.65-1293T>A
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000385869
  ensembl transcript: ENST00000404209
  gene symbol: PSG8
  hgvsc: ENST00000404209.4:c.8T>A
  hgvsp: ENSP00000385869.3:p.Leu3His
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000124467
  ensembl transcript: ENST00000469260
  gene symbol: PSG8
  hgvsc: ENST00000469260.1:n.94T>A
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000124467
  ensembl transcript: ENST00000593692
  gene symbol: PSG8
  hgvsc: ENST00000593692.1:n.90T>A
  variant of: http://identifiers.org/hgnc/9525
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 2569
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4671
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4828
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3804
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5722
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3709
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3480
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1150
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 944
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1648
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6136
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5638
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3464
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1234
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6218
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4889
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 928
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1944
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1616
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46587
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Leu3His
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: African
population: European (Non-Finnish)
population: East Asian
population: Other
population: South Asian
reference allele: A
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum

19-43269727-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43269727
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 43269727
    reference: chr 19
allele count: 1
allele frequency: 8.273077750384698e-6
allele num: 120874
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000385869
  ensembl transcript: ENST00000404209
  gene symbol: PSG8
  hgvsc: ENST00000404209.4:c.7C>T
  hgvsp: ENSP00000385869.3:p.Leu3Phe
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000124467
  ensembl transcript: ENST00000469260
  gene symbol: PSG8
  hgvsc: ENST00000469260.1:n.93C>T
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000124467
  ensembl transcript: ENST00000593692
  gene symbol: PSG8
  hgvsc: ENST00000593692.1:n.89C>T
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000386090
  ensembl transcript: ENST00000401467
  gene symbol: PSG8
  hgvsc: ENST00000401467.2:c.65-1294C>T
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000469979
  ensembl transcript: ENST00000478387
  gene symbol: PSG8
  hgvsc: ENST00000478387.1:c.7C>T
  hgvsp: ENSP00000469979.1:p.Leu3Phe
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000305005
  ensembl transcript: ENST00000306511
  gene symbol: PSG8
  hgvsc: ENST00000306511.4:c.7C>T
  hgvsp: ENSP00000305005.4:p.Leu3Phe
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000385081
  ensembl transcript: ENST00000406636
  gene symbol: PSG8
  hgvsc: ENST00000406636.3:c.7C>T
  hgvsp: ENSP00000385081.3:p.Leu3Phe
  variant of: http://identifiers.org/hgnc/9525
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5638
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1148
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1237
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3805
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3480
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 944
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1648
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4670
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3466
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5722
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6137
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4828
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3709
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2569
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6218
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4881
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4278
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 928
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 979
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Leu3Phe
num of homozygotes: 0
population: Latino
population: Other
population: South Asian
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP

19-43269732-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43269732
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 43269732
    reference: chr 19
allele count: 1
allele frequency: 8.272940865018697e-6
allele num: 120876
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: start_lost
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000385869
  ensembl transcript: ENST00000404209
  gene symbol: PSG8
  hgvsc: ENST00000404209.4:c.2T>C
  hgvsp: ENSP00000385869.3:p.Met1?
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: true
  consequence: start_lost
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000305005
  ensembl transcript: ENST00000306511
  gene symbol: PSG8
  hgvsc: ENST00000306511.4:c.2T>C
  hgvsp: ENSP00000305005.4:p.Met1?
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000124467
  ensembl transcript: ENST00000593692
  gene symbol: PSG8
  hgvsc: ENST00000593692.1:n.84T>C
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: start_lost
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000469979
  ensembl transcript: ENST00000478387
  gene symbol: PSG8
  hgvsc: ENST00000478387.1:c.2T>C
  hgvsp: ENSP00000469979.1:p.Met1?
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000386090
  ensembl transcript: ENST00000401467
  gene symbol: PSG8
  hgvsc: ENST00000401467.2:c.65-1299T>C
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000124467
  ensembl transcript: ENST00000469260
  gene symbol: PSG8
  hgvsc: ENST00000469260.1:n.88T>C
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: start_lost
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000385081
  ensembl transcript: ENST00000406636
  gene symbol: PSG8
  hgvsc: ENST00000406636.3:c.2T>C
  hgvsp: ENSP00000385081.3:p.Met1?
  variant of: http://identifiers.org/hgnc/9525
canonical: true
consequence: start lost
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5636
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1142
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3712
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2568
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4826
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6217
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4671
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3453
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1237
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3465
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3803
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 944
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1648
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5720
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6137
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4880
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4263
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2005
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1614
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 339
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Met1?
num of homozygotes: 0
population: Latino
population: African
population: Other
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
reference allele: A
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: MQ

19-43269741-GCTGT-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43269741
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 43269737
    reference: chr 19
allele count: 1
allele frequency: 8.275542461808372e-6
allele num: 120838
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000469979
  ensembl transcript: ENST00000478387
  gene symbol: PSG8
  hgvsc: ENST00000478387.1:c.-12_-9delACAG
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000124467
  ensembl transcript: ENST00000593692
  gene symbol: PSG8
  hgvsc: ENST00000593692.1:n.71_74delACAG
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000385869
  ensembl transcript: ENST00000404209
  gene symbol: PSG8
  hgvsc: ENST00000404209.4:c.-12_-9delACAG
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000124467
  ensembl transcript: ENST00000469260
  gene symbol: PSG8
  hgvsc: ENST00000469260.1:n.75_78delACAG
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000386090
  ensembl transcript: ENST00000401467
  gene symbol: PSG8
  hgvsc: ENST00000401467.2:c.65-1312_65-1309delACAG
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000385081
  ensembl transcript: ENST00000406636
  gene symbol: PSG8
  hgvsc: ENST00000406636.3:c.-12_-9delACAG
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000305005
  ensembl transcript: ENST00000306511
  gene symbol: PSG8
  hgvsc: ENST00000306511.4:c.-12_-9delACAG
  variant of: http://identifiers.org/hgnc/9525
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5719
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6217
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3382
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1648
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1144
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2568
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3800
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4829
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3693
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6136
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4670
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4881
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1237
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3465
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5635
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 944
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4186
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1944
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1983
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: European (Non-Finnish)
population: South Asian
population: Latino
population: European (Finnish)
population: East Asian
reference allele: GCTGT
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD

http://identifiers.org/exac.variant/19-43269742-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43269742
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 43269742
    reference: chr 19
allele count: 2
allele frequency: 1.655163281857755e-5
allele num: 120834
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000386090
  ensembl transcript: ENST00000401467
  gene symbol: PSG8
  hgvsc: ENST00000401467.2:c.65-1309G>T
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000124467
  ensembl transcript: ENST00000593692
  gene symbol: PSG8
  hgvsc: ENST00000593692.1:n.74G>T
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000385869
  ensembl transcript: ENST00000404209
  gene symbol: PSG8
  hgvsc: ENST00000404209.4:c.-9G>T
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000305005
  ensembl transcript: ENST00000306511
  gene symbol: PSG8
  hgvsc: ENST00000306511.4:c.-9G>T
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000385081
  ensembl transcript: ENST00000406636
  gene symbol: PSG8
  hgvsc: ENST00000406636.3:c.-9G>T
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000124467
  ensembl transcript: ENST00000469260
  gene symbol: PSG8
  hgvsc: ENST00000469260.1:n.78G>T
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000469979
  ensembl transcript: ENST00000478387
  gene symbol: PSG8
  hgvsc: ENST00000478387.1:c.-9G>T
  variant of: http://identifiers.org/hgnc/9525
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1141
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4670
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2568
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3798
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 945
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3686
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3465
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4879
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6136
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5719
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3379
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4828
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6216
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1237
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1648
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5635
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4170
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 392
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1944
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1717
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: Other
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: QD

19-43269742-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43269742
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 43269742
    reference: chr 19
allele count: 1
allele frequency: 8.275816409288777e-6
allele num: 120834
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000124467
  ensembl transcript: ENST00000469260
  gene symbol: PSG8
  hgvsc: ENST00000469260.1:n.78G>A
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000386090
  ensembl transcript: ENST00000401467
  gene symbol: PSG8
  hgvsc: ENST00000401467.2:c.65-1309G>A
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000124467
  ensembl transcript: ENST00000593692
  gene symbol: PSG8
  hgvsc: ENST00000593692.1:n.74G>A
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000469979
  ensembl transcript: ENST00000478387
  gene symbol: PSG8
  hgvsc: ENST00000478387.1:c.-9G>A
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000385081
  ensembl transcript: ENST00000406636
  gene symbol: PSG8
  hgvsc: ENST00000406636.3:c.-9G>A
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000385869
  ensembl transcript: ENST00000404209
  gene symbol: PSG8
  hgvsc: ENST00000404209.4:c.-9G>A
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000305005
  ensembl transcript: ENST00000306511
  gene symbol: PSG8
  hgvsc: ENST00000306511.4:c.-9G>A
  variant of: http://identifiers.org/hgnc/9525
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6216
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3798
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 945
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6136
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5635
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1648
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2568
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3686
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3465
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3379
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1141
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4828
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5719
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4879
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1237
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4670
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4170
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1974
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD

19-43269745-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43269745
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 43269745
    reference: chr 19
allele count: 1
allele frequency: 8.276912380605539e-6
allele num: 120818
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000469979
  ensembl transcript: ENST00000478387
  gene symbol: PSG8
  hgvsc: ENST00000478387.1:c.-12A>G
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000386090
  ensembl transcript: ENST00000401467
  gene symbol: PSG8
  hgvsc: ENST00000401467.2:c.65-1312A>G
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000385081
  ensembl transcript: ENST00000406636
  gene symbol: PSG8
  hgvsc: ENST00000406636.3:c.-12A>G
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000124467
  ensembl transcript: ENST00000469260
  gene symbol: PSG8
  hgvsc: ENST00000469260.1:n.75A>G
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000385869
  ensembl transcript: ENST00000404209
  gene symbol: PSG8
  hgvsc: ENST00000404209.4:c.-12A>G
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000305005
  ensembl transcript: ENST00000306511
  gene symbol: PSG8
  hgvsc: ENST00000306511.4:c.-12A>G
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000124467
  ensembl transcript: ENST00000593692
  gene symbol: PSG8
  hgvsc: ENST00000593692.1:n.71A>G
  variant of: http://identifiers.org/hgnc/9525
canonical: true
consequence: 5' UTR
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3345
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5718
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1237
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 414
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3795
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1648
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3671
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6136
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1110
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6218
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4879
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4825
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5635
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3465
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2568
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 944
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4670
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 914
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 980
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 142
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: South Asian
population: Other
population: East Asian
population: European (Finnish)
reference allele: T
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/19-43269746-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43269746
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 43269746
    reference: chr 19
allele count: 2
allele frequency: 1.655355073663301e-5
allele num: 120820
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000124467
  ensembl transcript: ENST00000593692
  gene symbol: PSG8
  hgvsc: ENST00000593692.1:n.70G>T
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000386090
  ensembl transcript: ENST00000401467
  gene symbol: PSG8
  hgvsc: ENST00000401467.2:c.65-1313G>T
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000305005
  ensembl transcript: ENST00000306511
  gene symbol: PSG8
  hgvsc: ENST00000306511.4:c.-13G>T
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000469979
  ensembl transcript: ENST00000478387
  gene symbol: PSG8
  hgvsc: ENST00000478387.1:c.-13G>T
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000385869
  ensembl transcript: ENST00000404209
  gene symbol: PSG8
  hgvsc: ENST00000404209.4:c.-13G>T
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000385081
  ensembl transcript: ENST00000406636
  gene symbol: PSG8
  hgvsc: ENST00000406636.3:c.-13G>T
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000124467
  ensembl transcript: ENST00000469260
  gene symbol: PSG8
  hgvsc: ENST00000469260.1:n.74G>T
  variant of: http://identifiers.org/hgnc/9525
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5635
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6133
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5717
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4670
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1113
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4822
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3798
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3351
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2568
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6218
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1236
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 946
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3464
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4878
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1648
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3667
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46572
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: African
reference allele: C
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: QD

19-43269746-CTG-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43269746
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 43269744
    reference: chr 19
allele count: 6
allele frequency: 4.966065220989903e-5
allele num: 120820
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000386090
  ensembl transcript: ENST00000401467
  gene symbol: PSG8
  hgvsc: ENST00000401467.2:c.65-1315_65-1314delCA
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000469979
  ensembl transcript: ENST00000478387
  gene symbol: PSG8
  hgvsc: ENST00000478387.1:c.-15_-14delCA
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000305005
  ensembl transcript: ENST00000306511
  gene symbol: PSG8
  hgvsc: ENST00000306511.4:c.-15_-14delCA
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000385869
  ensembl transcript: ENST00000404209
  gene symbol: PSG8
  hgvsc: ENST00000404209.4:c.-15_-14delCA
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000385081
  ensembl transcript: ENST00000406636
  gene symbol: PSG8
  hgvsc: ENST00000406636.3:c.-15_-14delCA
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000124467
  ensembl transcript: ENST00000593692
  gene symbol: PSG8
  hgvsc: ENST00000593692.1:n.68_69delCA
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000124467
  ensembl transcript: ENST00000469260
  gene symbol: PSG8
  hgvsc: ENST00000469260.1:n.72_73delCA
  variant of: http://identifiers.org/hgnc/9525
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3798
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1236
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4878
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3464
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6218
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3351
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3667
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6133
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1113
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 946
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5717
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1648
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4822
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4670
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2568
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5635
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1954
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 138
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1942
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 429
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
reference allele: CTG
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: MQ

19-43269749-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43269749
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 43269749
    reference: chr 19
allele count: 8
allele frequency: 6.622845505571468e-5
allele num: 120794
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000385869
  ensembl transcript: ENST00000404209
  gene symbol: PSG8
  hgvsc: ENST00000404209.4:c.-16A>G
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000305005
  ensembl transcript: ENST00000306511
  gene symbol: PSG8
  hgvsc: ENST00000306511.4:c.-16A>G
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000124467
  ensembl transcript: ENST00000469260
  gene symbol: PSG8
  hgvsc: ENST00000469260.1:n.71A>G
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000385081
  ensembl transcript: ENST00000406636
  gene symbol: PSG8
  hgvsc: ENST00000406636.3:c.-16A>G
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000386090
  ensembl transcript: ENST00000401467
  gene symbol: PSG8
  hgvsc: ENST00000401467.2:c.65-1316A>G
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000124467
  ensembl transcript: ENST00000593692
  gene symbol: PSG8
  hgvsc: ENST00000593692.1:n.67A>G
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000469979
  ensembl transcript: ENST00000478387
  gene symbol: PSG8
  hgvsc: ENST00000478387.1:c.-16A>G
  variant of: http://identifiers.org/hgnc/9525
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3795
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5715
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6133
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4823
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1236
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6219
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3317
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1648
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1091
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5636
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3648
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4876
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 944
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2569
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4670
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3464
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 450
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 157
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 134
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 979
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: East Asian
population: European (Finnish)
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: T
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: QD

19-43269757-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43269757
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 43269757
    reference: chr 19
allele count: 1
allele frequency: 8.279927799029592e-6
allele num: 120774
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000469979
  ensembl transcript: ENST00000478387
  gene symbol: PSG8
  hgvsc: ENST00000478387.1:c.-24G>C
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000386090
  ensembl transcript: ENST00000401467
  gene symbol: PSG8
  hgvsc: ENST00000401467.2:c.65-1324G>C
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000124467
  ensembl transcript: ENST00000593692
  gene symbol: PSG8
  hgvsc: ENST00000593692.1:n.59G>C
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000305005
  ensembl transcript: ENST00000306511
  gene symbol: PSG8
  hgvsc: ENST00000306511.4:c.-24G>C
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000385081
  ensembl transcript: ENST00000406636
  gene symbol: PSG8
  hgvsc: ENST00000406636.3:c.-24G>C
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000385869
  ensembl transcript: ENST00000404209
  gene symbol: PSG8
  hgvsc: ENST00000404209.4:c.-24G>C
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000124467
  ensembl transcript: ENST00000469260
  gene symbol: PSG8
  hgvsc: ENST00000469260.1:n.63G>C
  variant of: http://identifiers.org/hgnc/9525
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3565
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5635
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1648
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6218
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 567
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3201
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1047
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4873
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4670
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5716
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3790
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 943
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2568
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4820
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6133
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1237
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3464
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 895
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 226
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 978
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 164
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46558
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3893
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1709
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: Other
population: Latino
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: DP

19-43269759-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43269759
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 43269759
    reference: chr 19
allele count: 1
allele frequency: 8.279790686891435e-6
allele num: 120776
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000305005
  ensembl transcript: ENST00000306511
  gene symbol: PSG8
  hgvsc: ENST00000306511.4:c.-26A>G
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000385081
  ensembl transcript: ENST00000406636
  gene symbol: PSG8
  hgvsc: ENST00000406636.3:c.-26A>G
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000386090
  ensembl transcript: ENST00000401467
  gene symbol: PSG8
  hgvsc: ENST00000401467.2:c.65-1326A>G
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000124467
  ensembl transcript: ENST00000469260
  gene symbol: PSG8
  hgvsc: ENST00000469260.1:n.61A>G
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000124467
  ensembl transcript: ENST00000593692
  gene symbol: PSG8
  hgvsc: ENST00000593692.1:n.57A>G
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000385869
  ensembl transcript: ENST00000404209
  gene symbol: PSG8
  hgvsc: ENST00000404209.4:c.-26A>G
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000469979
  ensembl transcript: ENST00000478387
  gene symbol: PSG8
  hgvsc: ENST00000478387.1:c.-26A>G
  variant of: http://identifiers.org/hgnc/9525
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3781
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6218
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4818
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3465
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1237
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6133
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 606
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5716
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3129
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1024
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2568
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5635
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 943
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4872
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1648
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3540
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4670
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3776
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1844
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1941
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 975
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 194
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 184
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: African
population: East Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
reference allele: T
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: ClippingRankSum

19-43269762-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43269762
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 43269762
    reference: chr 19
allele count: 4
allele frequency: 3.312464805061446e-5
allele num: 120756
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000124467
  ensembl transcript: ENST00000593692
  gene symbol: PSG8
  hgvsc: ENST00000593692.1:n.54C>G
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000305005
  ensembl transcript: ENST00000306511
  gene symbol: PSG8
  hgvsc: ENST00000306511.4:c.-29C>G
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000469979
  ensembl transcript: ENST00000478387
  gene symbol: PSG8
  hgvsc: ENST00000478387.1:c.-29C>G
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000386090
  ensembl transcript: ENST00000401467
  gene symbol: PSG8
  hgvsc: ENST00000401467.2:c.65-1329C>G
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000124467
  ensembl transcript: ENST00000469260
  gene symbol: PSG8
  hgvsc: ENST00000469260.1:n.58C>G
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000385081
  ensembl transcript: ENST00000406636
  gene symbol: PSG8
  hgvsc: ENST00000406636.3:c.-29C>G
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000385869
  ensembl transcript: ENST00000404209
  gene symbol: PSG8
  hgvsc: ENST00000404209.4:c.-29C>G
  variant of: http://identifiers.org/hgnc/9525
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5635
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1007
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 648
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3497
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6217
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3772
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3465
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3036
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5712
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1237
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1647
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4671
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4813
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6133
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2569
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 514
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 942
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4872
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3610
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 544
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1938
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1704
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 202
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: Other
population: European (Non-Finnish)
population: Latino
population: East Asian
population: European (Finnish)
reference allele: G
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: FS
site quality: ReadPosRankSum

19-43269764-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43269764
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 43269764
    reference: chr 19
allele count: 1
allele frequency: 8.281847845891375e-6
allele num: 120746
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000469979
  ensembl transcript: ENST00000478387
  gene symbol: PSG8
  hgvsc: ENST00000478387.1:c.-31C>T
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000124467
  ensembl transcript: ENST00000469260
  gene symbol: PSG8
  hgvsc: ENST00000469260.1:n.56C>T
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000124467
  ensembl transcript: ENST00000593692
  gene symbol: PSG8
  hgvsc: ENST00000593692.1:n.52C>T
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000385081
  ensembl transcript: ENST00000406636
  gene symbol: PSG8
  hgvsc: ENST00000406636.3:c.-31C>T
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000305005
  ensembl transcript: ENST00000306511
  gene symbol: PSG8
  hgvsc: ENST00000306511.4:c.-31C>T
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000385869
  ensembl transcript: ENST00000404209
  gene symbol: PSG8
  hgvsc: ENST00000404209.4:c.-31C>T
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000386090
  ensembl transcript: ENST00000401467
  gene symbol: PSG8
  hgvsc: ENST00000401467.2:c.65-1331C>T
  variant of: http://identifiers.org/hgnc/9525
canonical: true
consequence: 5' UTR
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5635
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 942
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4814
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4671
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 552
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3766
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3465
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1647
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1238
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 671
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2998
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6133
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2570
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3468
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6217
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1016
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4869
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5713
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 972
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 878
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46552
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 319
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 262
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1938
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: African
population: South Asian
population: Other
population: East Asian
reference allele: G
site quality: FS
site quality: DP
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum

19-43269766-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43269766
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 43269766
    reference: chr 19
allele count: 3
allele frequency: 2.484883624616914e-5
allele num: 120730
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000124467
  ensembl transcript: ENST00000469260
  gene symbol: PSG8
  hgvsc: ENST00000469260.1:n.54T>C
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000305005
  ensembl transcript: ENST00000306511
  gene symbol: PSG8
  hgvsc: ENST00000306511.4:c.-33T>C
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000386090
  ensembl transcript: ENST00000401467
  gene symbol: PSG8
  hgvsc: ENST00000401467.2:c.65-1333T>C
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000385081
  ensembl transcript: ENST00000406636
  gene symbol: PSG8
  hgvsc: ENST00000406636.3:c.-33T>C
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000385869
  ensembl transcript: ENST00000404209
  gene symbol: PSG8
  hgvsc: ENST00000404209.4:c.-33T>C
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000124467
  ensembl transcript: ENST00000593692
  gene symbol: PSG8
  hgvsc: ENST00000593692.1:n.50T>C
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000469979
  ensembl transcript: ENST00000478387
  gene symbol: PSG8
  hgvsc: ENST00000478387.1:c.-33T>C
  variant of: http://identifiers.org/hgnc/9525
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6217
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1005
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1238
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3465
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5712
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6133
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2570
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3387
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4868
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3751
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 942
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2816
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 689
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1648
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4809
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4671
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 820
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5635
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3249
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 971
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1938
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 349
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1725
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 157
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: A
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/19-43269768-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43269768
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 43269768
    reference: chr 19
allele count: 3
allele frequency: 2.485048292771823e-5
allele num: 120722
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000305005
  ensembl transcript: ENST00000306511
  gene symbol: PSG8
  hgvsc: ENST00000306511.4:c.-35T>G
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000386090
  ensembl transcript: ENST00000401467
  gene symbol: PSG8
  hgvsc: ENST00000401467.2:c.65-1335T>G
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000124467
  ensembl transcript: ENST00000593692
  gene symbol: PSG8
  hgvsc: ENST00000593692.1:n.48T>G
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000124467
  ensembl transcript: ENST00000469260
  gene symbol: PSG8
  hgvsc: ENST00000469260.1:n.52T>G
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000469979
  ensembl transcript: ENST00000478387
  gene symbol: PSG8
  hgvsc: ENST00000478387.1:c.-35T>G
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000385081
  ensembl transcript: ENST00000406636
  gene symbol: PSG8
  hgvsc: ENST00000406636.3:c.-35T>G
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000385869
  ensembl transcript: ENST00000404209
  gene symbol: PSG8
  hgvsc: ENST00000404209.4:c.-35T>G
  variant of: http://identifiers.org/hgnc/9525
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6217
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 820
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4868
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3750
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1238
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5635
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 942
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2570
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3465
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2822
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5712
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 686
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1648
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4808
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1018
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6132
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4671
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3370
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 241
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 387
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 868
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 147
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 128
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46550
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: A
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum

19-43269770-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43269770
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 43269770
    reference: chr 19
allele count: 1
allele frequency: 8.284592315212168e-6
allele num: 120706
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000469979
  ensembl transcript: ENST00000478387
  gene symbol: PSG8
  hgvsc: ENST00000478387.1:c.-37C>T
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000386090
  ensembl transcript: ENST00000401467
  gene symbol: PSG8
  hgvsc: ENST00000401467.2:c.65-1337C>T
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000385869
  ensembl transcript: ENST00000404209
  gene symbol: PSG8
  hgvsc: ENST00000404209.4:c.-37C>T
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000305005
  ensembl transcript: ENST00000306511
  gene symbol: PSG8
  hgvsc: ENST00000306511.4:c.-37C>T
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000124467
  ensembl transcript: ENST00000593692
  gene symbol: PSG8
  hgvsc: ENST00000593692.1:n.46C>T
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000124467
  ensembl transcript: ENST00000469260
  gene symbol: PSG8
  hgvsc: ENST00000469260.1:n.50C>T
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000385081
  ensembl transcript: ENST00000406636
  gene symbol: PSG8
  hgvsc: ENST00000406636.3:c.-37C>T
  variant of: http://identifiers.org/hgnc/9525
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4868
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3741
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6216
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1013
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4810
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2758
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6132
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1648
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 690
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3333
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3466
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 942
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 926
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5635
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4670
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1237
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5711
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2570
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 175
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46551
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 392
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 406
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1711
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1937
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 564
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: Other
population: East Asian
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD

19-43269772-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43269772
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 43269772
    reference: chr 19
allele count: 1
allele frequency: 8.285827919925758e-6
allele num: 120688
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000124467
  ensembl transcript: ENST00000593692
  gene symbol: PSG8
  hgvsc: ENST00000593692.1:n.44C>A
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000385869
  ensembl transcript: ENST00000404209
  gene symbol: PSG8
  hgvsc: ENST00000404209.4:c.-39C>A
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000305005
  ensembl transcript: ENST00000306511
  gene symbol: PSG8
  hgvsc: ENST00000306511.4:c.-39C>A
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000385081
  ensembl transcript: ENST00000406636
  gene symbol: PSG8
  hgvsc: ENST00000406636.3:c.-39C>A
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000469979
  ensembl transcript: ENST00000478387
  gene symbol: PSG8
  hgvsc: ENST00000478387.1:c.-39C>A
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000386090
  ensembl transcript: ENST00000401467
  gene symbol: PSG8
  hgvsc: ENST00000401467.2:c.65-1339C>A
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000124467
  ensembl transcript: ENST00000469260
  gene symbol: PSG8
  hgvsc: ENST00000469260.1:n.48C>A
  variant of: http://identifiers.org/hgnc/9525
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1648
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1036
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3466
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1237
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4868
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2667
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3732
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 691
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6132
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3285
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4808
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1048
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5635
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6215
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5711
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2570
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 942
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4670
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1692
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 972
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 441
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 554
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 858
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 172
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1937
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1569
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: Other
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
reference allele: G
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: MQ

19-43269773-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43269773
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 43269773
    reference: chr 19
allele count: 1
allele frequency: 8.28775070445881e-6
allele num: 120660
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000305005
  ensembl transcript: ENST00000306511
  gene symbol: PSG8
  hgvsc: ENST00000306511.4:c.-40G>C
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000386090
  ensembl transcript: ENST00000401467
  gene symbol: PSG8
  hgvsc: ENST00000401467.2:c.65-1340G>C
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000385081
  ensembl transcript: ENST00000406636
  gene symbol: PSG8
  hgvsc: ENST00000406636.3:c.-40G>C
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000469979
  ensembl transcript: ENST00000478387
  gene symbol: PSG8
  hgvsc: ENST00000478387.1:c.-40G>C
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000124467
  ensembl transcript: ENST00000593692
  gene symbol: PSG8
  hgvsc: ENST00000593692.1:n.43G>C
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000385869
  ensembl transcript: ENST00000404209
  gene symbol: PSG8
  hgvsc: ENST00000404209.4:c.-40G>C
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000124467
  ensembl transcript: ENST00000469260
  gene symbol: PSG8
  hgvsc: ENST00000469260.1:n.47G>C
  variant of: http://identifiers.org/hgnc/9525
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6132
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4807
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3254
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4868
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 942
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1029
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1648
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2570
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 700
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3466
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6215
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3730
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5711
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2633
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4670
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1238
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1115
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5634
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 553
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 849
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 259
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 477
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 261
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 201
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1934
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: Other
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum

19-43269779-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43269779
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 43269779
    reference: chr 19
allele count: 3
allele frequency: 2.486943546381497e-5
allele num: 120630
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000385869
  ensembl transcript: ENST00000404209
  gene symbol: PSG8
  hgvsc: ENST00000404209.4:c.-46T>A
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000305005
  ensembl transcript: ENST00000306511
  gene symbol: PSG8
  hgvsc: ENST00000306511.4:c.-46T>A
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000469979
  ensembl transcript: ENST00000478387
  gene symbol: PSG8
  hgvsc: ENST00000478387.1:c.-46T>A
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000385081
  ensembl transcript: ENST00000406636
  gene symbol: PSG8
  hgvsc: ENST00000406636.3:c.-46T>A
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000124467
  ensembl transcript: ENST00000469260
  gene symbol: PSG8
  hgvsc: ENST00000469260.1:n.41T>A
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000386090
  ensembl transcript: ENST00000401467
  gene symbol: PSG8
  hgvsc: ENST00000401467.2:c.65-1346T>A
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000124467
  ensembl transcript: ENST00000593692
  gene symbol: PSG8
  hgvsc: ENST00000593692.1:n.37T>A
  variant of: http://identifiers.org/hgnc/9525
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1237
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1208
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1648
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3034
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 690
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4868
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5633
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3687
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6215
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5706
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2345
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 333
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4793
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 942
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1493
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2570
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3468
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4669
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6132
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 498
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46545
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 825
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 582
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 277
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: South Asian
population: East Asian
reference allele: A
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD

19-43269780-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43269780
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 43269780
    reference: chr 19
allele count: 1
allele frequency: 8.294212298657997e-6
allele num: 120566
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000124467
  ensembl transcript: ENST00000469260
  gene symbol: PSG8
  hgvsc: ENST00000469260.1:n.40A>C
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000386090
  ensembl transcript: ENST00000401467
  gene symbol: PSG8
  hgvsc: ENST00000401467.2:c.65-1347A>C
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000385869
  ensembl transcript: ENST00000404209
  gene symbol: PSG8
  hgvsc: ENST00000404209.4:c.-47A>C
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000305005
  ensembl transcript: ENST00000306511
  gene symbol: PSG8
  hgvsc: ENST00000306511.4:c.-47A>C
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000469979
  ensembl transcript: ENST00000478387
  gene symbol: PSG8
  hgvsc: ENST00000478387.1:c.-47A>C
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000124467
  ensembl transcript: ENST00000593692
  gene symbol: PSG8
  hgvsc: ENST00000593692.1:n.36A>C
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000385081
  ensembl transcript: ENST00000406636
  gene symbol: PSG8
  hgvsc: ENST00000406636.3:c.-47A>C
  variant of: http://identifiers.org/hgnc/9525
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2296
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4670
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1682
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2569
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5705
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4787
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4868
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3653
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6213
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 678
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6132
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 942
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2936
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1207
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1648
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1237
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3467
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5634
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1928
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1701
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 970
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 515
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 607
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 505
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46545
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 483
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 696
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Non-Finnish)
population: Other
population: South Asian
population: African
population: European (Finnish)
reference allele: T
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: QD

http://identifiers.org/exac.variant/19-43357966-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43357966
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 43357966
    reference: chr 19
allele count: 72
allele frequency: 6.021980227831586e-4
allele num: 119562
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000386090
  ensembl transcript: ENST00000401467
  gene symbol: PSG8
  hgvsc: ENST00000401467.2:c.64+1742G>T
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000248257
  ensembl transcript: ENST00000501199
  gene symbol: PSG10P
  hgvsc: ENST00000501199.4:n.430+135G>T
  variant of: http://identifiers.org/hgnc/9515
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000248257
  ensembl transcript: ENST00000597171
  gene symbol: PSG10P
  hgvsc: ENST00000597171.1:n.529+135G>T
  variant of: http://identifiers.org/hgnc/9515
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3699
  bin: 8.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 666
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1452
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3524
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1063
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 645
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1125
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3083
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1197
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1489
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1357
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 663
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1301
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2633
  bin: 7.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 2047
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1251
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3933
  bin: 9.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 27639
  bin: 9.75e1
  variant carriers: 28
genotype depth: GenotypeDepth
  all individuals: 1680
  bin: 6.25e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 660
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 309
  bin: 3.25e1
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genotype quality: GenotypeQuality
  all individuals: 24
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 249
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 159
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 185
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 579
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 209
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 154
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 499
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 464
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 943
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 273
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 164
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 400
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 628
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54025
  bin: 9.75e1
  variant carriers: 69
num of homozygotes: 2
population: South Asian
population: Latino
population: East Asian
population: Other
population: European (Finnish)
population: African
population: European (Non-Finnish)
reference allele: C
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum

19-43357971-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43357971
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 43357971
    reference: chr 19
allele count: 4
allele frequency: 3.344313830409846e-5
allele num: 119606
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000248257
  ensembl transcript: ENST00000597171
  gene symbol: PSG10P
  hgvsc: ENST00000597171.1:n.529+130A>G
  variant of: http://identifiers.org/hgnc/9515
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000248257
  ensembl transcript: ENST00000501199
  gene symbol: PSG10P
  hgvsc: ENST00000501199.4:n.430+130A>G
  variant of: http://identifiers.org/hgnc/9515
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000386090
  ensembl transcript: ENST00000401467
  gene symbol: PSG8
  hgvsc: ENST00000401467.2:c.64+1737A>G
  variant of: http://identifiers.org/hgnc/9525
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1502
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1357
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3698
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 659
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3522
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1454
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1128
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1300
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1197
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27640
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1271
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3084
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1289
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 645
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3935
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2633
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2046
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1680
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 592
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 638
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 683
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 176
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 608
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 409
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 226
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 1.25e1
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genotype quality: GenotypeQuality
  all individuals: 182
  bin: 2.75e1
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genotype quality: GenotypeQuality
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  bin: 4.25e1
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genotype quality: GenotypeQuality
  all individuals: 584
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 79
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54023
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 299
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: Other
population: African
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: T
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: QD

19-43357979-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43357979
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 43357979
    reference: chr 19
allele count: 3
allele frequency: 2.507732174203795e-5
allele num: 119630
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000248257
  ensembl transcript: ENST00000501199
  gene symbol: PSG10P
  hgvsc: ENST00000501199.4:n.430+122G>A
  variant of: http://identifiers.org/hgnc/9515
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000248257
  ensembl transcript: ENST00000597171
  gene symbol: PSG10P
  hgvsc: ENST00000597171.1:n.529+122G>A
  variant of: http://identifiers.org/hgnc/9515
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000386090
  ensembl transcript: ENST00000401467
  gene symbol: PSG8
  hgvsc: ENST00000401467.2:c.64+1729G>A
  variant of: http://identifiers.org/hgnc/9525
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1198
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1463
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2046
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2633
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1560
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 682
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1331
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1485
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 27642
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3521
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1680
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3084
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3934
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1309
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3698
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1357
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1130
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 709
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 653
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54035
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 418
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genotype quality: GenotypeQuality
  all individuals: 624
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genotype quality: GenotypeQuality
  all individuals: 482
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 260
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 600
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genotype quality: GenotypeQuality
  all individuals: 1456
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: European (Finnish)
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum

19-43357980-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43357980
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 43357980
    reference: chr 19
allele count: 29
allele frequency: 2.424100575096964e-4
allele num: 119632
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000248257
  ensembl transcript: ENST00000597171
  gene symbol: PSG10P
  hgvsc: ENST00000597171.1:n.529+121A>G
  variant of: http://identifiers.org/hgnc/9515
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000386090
  ensembl transcript: ENST00000401467
  gene symbol: PSG8
  hgvsc: ENST00000401467.2:c.64+1728A>G
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000248257
  ensembl transcript: ENST00000501199
  gene symbol: PSG10P
  hgvsc: ENST00000501199.4:n.430+121A>G
  variant of: http://identifiers.org/hgnc/9515
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1506
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1197
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1342
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2634
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 555
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1129
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27648
  bin: 9.75e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 3521
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3083
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1680
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2042
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3935
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1309
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1356
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3699
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
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  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1566
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 260
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 655
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 487
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  variant carriers: 0
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54029
  bin: 9.75e1
  variant carriers: 25
genotype quality: GenotypeQuality
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  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1479
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 600
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 1
population: Latino
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Other
population: African
population: European (Finnish)
reference allele: T
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum

http://identifiers.org/exac.variant/19-43357981-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43357981
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 43357981
    reference: chr 19
allele count: 8
allele frequency: 6.684603686558933e-5
allele num: 119678
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000386090
  ensembl transcript: ENST00000401467
  gene symbol: PSG8
  hgvsc: ENST00000401467.2:c.64+1727G>T
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000248257
  ensembl transcript: ENST00000597171
  gene symbol: PSG10P
  hgvsc: ENST00000597171.1:n.529+120G>T
  variant of: http://identifiers.org/hgnc/9515
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000248257
  ensembl transcript: ENST00000501199
  gene symbol: PSG10P
  hgvsc: ENST00000501199.4:n.430+120G>T
  variant of: http://identifiers.org/hgnc/9515
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 543
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 680
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3699
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1355
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1527
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1680
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3520
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1196
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1567
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1311
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3934
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3085
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2633
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2042
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1129
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1463
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 27651
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1350
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 163
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 159
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 135
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 627
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 716
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 490
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 644
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 659
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 256
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 601
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 421
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54037
  bin: 9.75e1
  variant carriers: 8
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: South Asian
population: African
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum

19-43357983-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43357983
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 43357983
    reference: chr 19
allele count: 153
allele frequency: 1.278110067831724e-3
allele num: 119708
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000248257
  ensembl transcript: ENST00000501199
  gene symbol: PSG10P
  hgvsc: ENST00000501199.4:n.430+118T>C
  variant of: http://identifiers.org/hgnc/9515
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000386090
  ensembl transcript: ENST00000401467
  gene symbol: PSG8
  hgvsc: ENST00000401467.2:c.64+1725T>C
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000248257
  ensembl transcript: ENST00000597171
  gene symbol: PSG10P
  hgvsc: ENST00000597171.1:n.529+118T>C
  variant of: http://identifiers.org/hgnc/9515
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1559
  bin: 2.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 2626
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1355
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1129
  bin: 4.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 3931
  bin: 9.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1309
  bin: 4.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1562
  bin: 3.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 1352
  bin: 5.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 680
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3522
  bin: 8.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 520
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1678
  bin: 6.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1467
  bin: 3.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 3083
  bin: 7.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1202
  bin: 5.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 2034
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 27689
  bin: 9.75e1
  variant carriers: 74
genotype depth: GenotypeDepth
  all individuals: 3699
  bin: 8.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 653
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 248
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1540
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 122
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 723
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 623
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 143
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 639
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 152
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 418
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 599
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 495
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 1
population: Other
population: South Asian
population: European (Finnish)
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
reference allele: A
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD

19-43357985-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 43357985
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 43357985
    reference: chr 19
allele count: 1
allele frequency: 8.352265134304423e-6
allele num: 119728
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000248257
  ensembl transcript: ENST00000501199
  gene symbol: PSG10P
  hgvsc: ENST00000501199.4:n.430+116G>A
  variant of: http://identifiers.org/hgnc/9515
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000124467
  ensembl protein: ENSP00000386090
  ensembl transcript: ENST00000401467
  gene symbol: PSG8
  hgvsc: ENST00000401467.2:c.64+1723G>A
  variant of: http://identifiers.org/hgnc/9525
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000248257
  ensembl transcript: ENST00000597171
  gene symbol: PSG10P
  hgvsc: ENST00000597171.1:n.529+116G>A
  variant of: http://identifiers.org/hgnc/9515
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 481
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1199
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1354
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1374
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1466
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3700
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 673
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1310
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3078
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1608
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27689
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2627
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1132
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2032
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3932
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3523
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1677
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1568
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54051
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 225
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 153
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 737
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 601
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 493
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 126
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1629
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 652
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 653
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 421
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: African
population: European (Finnish)
population: South Asian
reference allele: C

GenotypeQuality
all individuals: 858
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 170
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 167
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 98
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 49879
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 122
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 760
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2259
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1338
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 5.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11488
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10176
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.073120369245719e-5
allele num: 16466
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66128
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8474
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.499e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.62e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.65e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.4e-3

DP
type: SiteQuality
SIO_000300: 3.548075e6

ClippingRankSum
type: SiteQuality
SIO_000300: -3.1e-2

MQ
type: SiteQuality
SIO_000300: 5.677e1

MQRankSum
type: SiteQuality
SIO_000300: -1.48e-1

QD
type: SiteQuality
SIO_000300: 1.209e1

GenotypeQuality
all individuals: 302
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 49881
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 68
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 162
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 762
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1346
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2292
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 166
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 117
bin: 1.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.517450682852807e-4
allele num: 6590
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8474
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.512218727316719e-5
allele num: 66128
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10174
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.704735376044568e-5
allele num: 11488
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16466
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -5.942e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.9e-2

MQ
type: SiteQuality
SIO_000300: 5.778e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.54e0

FS
type: SiteQuality
SIO_000300: 2.46e0

QD
type: SiteQuality
SIO_000300: 1.48e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.0e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.85e-1

DP
type: SiteQuality
SIO_000300: 3.548405e6

MQRankSum
type: SiteQuality
SIO_000300: 1.13e0

GenotypeQuality
all individuals: 116
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 328
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 78
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1349
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 162
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1513
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1210
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2425
bin: 6.25e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.704735376044568e-5
allele num: 11488
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66134
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8472
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16466
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10174
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.2e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -4.612e-1

MQ
type: SiteQuality
SIO_000300: 5.872e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.53e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.2e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -6.938e0

MQRankSum
type: SiteQuality
SIO_000300: 6.98e-1

QD
type: SiteQuality
SIO_000300: 1.534e1

DP
type: SiteQuality
SIO_000300: 3.549344e6

GenotypeQuality
all individuals: 1514
bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 89
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 49887
bin: 9.75e1
variant carriers: 6

GenotypeQuality
all individuals: 1347
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11490
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 9.072214830047176e-5
allele num: 66136
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10172
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16466
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8472
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.499e0

QD
type: SiteQuality
SIO_000300: 1.305e1

VQSLOD
type: SiteQuality
SIO_000300: -1.313e0

MQRankSum
type: SiteQuality
SIO_000300: 1.5e0

MQ
type: SiteQuality
SIO_000300: 5.731e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.48e-1

DP
type: SiteQuality
SIO_000300: 3.550108e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.4e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -4.564e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.63e-1

GenotypeQuality
all individuals: 60
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 49890
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 862
bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8472
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10176
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16466
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.703220191470844e-5
allele num: 11490
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66128
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.5e-1

MQ
type: SiteQuality
SIO_000300: 5.474e1

DP
type: SiteQuality
SIO_000300: 3.550633e6

QD
type: SiteQuality
SIO_000300: 1.909e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.8e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -8.978e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.947e0

MQRankSum
type: SiteQuality
SIO_000300: 5.590000000000001e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.317e0

GenotypeQuality
all individuals: 65
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 49891
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 1213
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 112
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 1355
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variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 120
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 5.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8476
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.536381781890764e-5
allele num: 66132
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10176
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16466
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11492
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.23e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.364e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.067e0

MQRankSum
type: SiteQuality
SIO_000300: -1.076e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.32e0

QD
type: SiteQuality
SIO_000300: 1.065e1

MQ
type: SiteQuality
SIO_000300: 5.489e1

FS
type: SiteQuality
SIO_000300: 2.822e0

DP
type: SiteQuality
SIO_000300: 3.551361e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.4e-3

GenotypeQuality
all individuals: 1220
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 110
bin: 3.75e1
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GenotypeQuality
all individuals: 49923
bin: 9.75e1
variant carriers: 121

GenotypeQuality
all individuals: 1342
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 376
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variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2463
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 115
allele frequency: 1.129887993711928e-2
allele num: 10178
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.024254521260509e-5
allele num: 66132
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16466
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

Latino
type: Population
allele count: 4
allele frequency: 3.480682213713888e-4
allele num: 11492
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8478
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.75e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.26e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.900000000000001e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.9e-3

MQ
type: SiteQuality
SIO_000300: 5.222e1

MQRankSum
type: SiteQuality
SIO_000300: -2.45e-1

QD
type: SiteQuality
SIO_000300: 1.339e1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 3.553752e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.769e0

GenotypeQuality
all individuals: 2509
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38
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variant carriers: 0

GenotypeQuality
all individuals: 858
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variant carriers: 0

GenotypeQuality
all individuals: 114
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variant carriers: 0

GenotypeQuality
all individuals: 74
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GenotypeQuality
all individuals: 55
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variant carriers: 0

GenotypeQuality
all individuals: 1355
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variant carriers: 0

GenotypeQuality
all individuals: 49908
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variant carriers: 39

GenotypeQuality
all individuals: 160
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variant carriers: 0

GenotypeQuality
all individuals: 784
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10178
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8478
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16466
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66150
num of homozygotes: 0

Latino
type: Population
allele count: 39
allele frequency: 3.394255874673629e-3
allele num: 11490
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.718e0

MQRankSum
type: SiteQuality
SIO_000300: -1.346e0

MQ
type: SiteQuality
SIO_000300: 5.376e1

VQSLOD
type: SiteQuality
SIO_000300: -1.171e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.7e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.1e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -2.38e-1

FS
type: SiteQuality
SIO_000300: 9.58e-1

DP
type: SiteQuality
SIO_000300: 3.554743e6

QD
type: SiteQuality
SIO_000300: 1.265e1

GenotypeQuality
all individuals: 858
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1360
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 785
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 142
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variant carriers: 0

GenotypeQuality
all individuals: 10
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GenotypeQuality
all individuals: 15
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variant carriers: 0

GenotypeQuality
all individuals: 106
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variant carriers: 0

GenotypeQuality
all individuals: 1510
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 49912
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variant carriers: 1

GenotypeQuality
all individuals: 1231
bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16466
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6588
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.511395925276585e-5
allele num: 66164
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8476
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11492
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10178
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.102e1

MQRankSum
type: SiteQuality
SIO_000300: 1.68e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.446e0

DP
type: SiteQuality
SIO_000300: 3.555872e6

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.18e0

MQ
type: SiteQuality
SIO_000300: 5.768e1

VQSLOD
type: SiteQuality
SIO_000300: -7.659e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.429e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.6e-3

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1358
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 43
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GenotypeQuality
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GenotypeQuality
all individuals: 35
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variant carriers: 0

GenotypeQuality
all individuals: 49912
bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 92
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variant carriers: 0

GenotypeQuality
all individuals: 1357
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8478
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16466
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10176
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.511258878645912e-5
allele num: 66170
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11492
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.138e1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 3.556026e6

MQRankSum
type: SiteQuality
SIO_000300: -5.01e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.306e0

MQ
type: SiteQuality
SIO_000300: 5.705e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.7e-3

VQSLOD
type: SiteQuality
SIO_000300: -2.276e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.379e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.2e0

GenotypeQuality
all individuals: 110
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 34
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GenotypeQuality
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bin: 9.75e1
variant carriers: 23

GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
all individuals: 1234
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GenotypeQuality
all individuals: 46
bin: 4.75e1
variant carriers: 0

Other
type: Population
allele count: 1
allele frequency: 1.111111111111111e-3
allele num: 900
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10178
num of homozygotes: 0

Latino
type: Population
allele count: 17
allele frequency: 1.479289940828402e-3
allele num: 11492
num of homozygotes: 1

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 9.066731141199227e-5
allele num: 66176
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16468
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8480
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.35e-1

FS
type: SiteQuality
SIO_000300: 8.179999999999999e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.27e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.11e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.0e-1

DP
type: SiteQuality
SIO_000300: 3.556682e6

QD
type: SiteQuality
SIO_000300: 1.549e1

MQRankSum
type: SiteQuality
SIO_000300: 2.42e0

MQ
type: SiteQuality
SIO_000300: 5.634e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.37e-2

GenotypeQuality
all individuals: 104
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1509
bin: 9.25e1
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GenotypeQuality
all individuals: 862
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GenotypeQuality
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bin: 6.75e1
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GenotypeQuality
all individuals: 82
bin: 3.75e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 21

GenotypeQuality
all individuals: 2610
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variant carriers: 0

GenotypeQuality
all individuals: 788
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10178
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.073120369245719e-5
allele num: 16466
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11492
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 20
allele frequency: 3.022335056064315e-4
allele num: 66174
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8480
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.22e0

VQSLOD
type: SiteQuality
SIO_000300: -4.679e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.1e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.01e-1

MQ
type: SiteQuality
SIO_000300: 5.6e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.36e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.66e0

DP
type: SiteQuality
SIO_000300: 3.557534e6

QD
type: SiteQuality
SIO_000300: 1.269e1

GenotypeQuality
all individuals: 1363
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 101
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GenotypeQuality
all individuals: 45
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GenotypeQuality
all individuals: 1238
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1512
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2646
bin: 6.25e1
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GenotypeQuality
all individuals: 49919
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 790
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 1.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10180
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.510756586898719e-5
allele num: 66192
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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South Asian
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East Asian
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QD
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DP
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ClippingRankSum
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FS
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MQRankSum
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BaseQRankSum
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MQ
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ReadPosRankSum
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VQSLOD
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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South Asian
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 1.510482750286992e-5
allele num: 66204
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Latino
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allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6590
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Other
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InbreedingCoeff
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FS
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MQRankSum
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MQ
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QD
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DP
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VQSLOD
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ReadPosRankSum
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BaseQRankSum
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ClippingRankSum
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SIO_000300: -3.89e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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African
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allele num: 10190
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East Asian
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European (Non-Finnish)
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Latino
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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Other
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MQRankSum
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MQ
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VQSLOD
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InbreedingCoeff
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ReadPosRankSum
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FS
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BaseQRankSum
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QD
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ClippingRankSum
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DP
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SIO_000300: 3.558721e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele count: 0
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European (Non-Finnish)
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East Asian
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allele num: 8484
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South Asian
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allele num: 16468
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Other
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6590
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Latino
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allele frequency: 8.69414014953921e-5
allele num: 11502
num of homozygotes: 0

MQ
type: SiteQuality
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FS
type: SiteQuality
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InbreedingCoeff
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VQSLOD
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BaseQRankSum
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QD
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MQRankSum
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SIO_000300: -5.705e0

DP
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ClippingRankSum
type: SiteQuality
SIO_000300: 5.600000000000001e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.3e-2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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allele count: 0
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allele num: 904
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African
type: Population
allele count: 0
allele frequency: 0.0e0
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11502
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66208
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South Asian
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allele frequency: 6.072382803011902e-5
allele num: 16468
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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East Asian
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VQSLOD
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FS
type: SiteQuality
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DP
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BaseQRankSum
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MQRankSum
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SIO_000300: -3.09e-1

ReadPosRankSum
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ClippingRankSum
type: SiteQuality
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QD
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MQ
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 1.2e-3

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele frequency: 1.178411501296253e-4
allele num: 8486
num of homozygotes: 0

Other
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European (Non-Finnish)
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allele count: 0
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European (Finnish)
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allele num: 6590
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African
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South Asian
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Latino
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FS
type: SiteQuality
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DP
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VQSLOD
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ClippingRankSum
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BaseQRankSum
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MQ
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InbreedingCoeff
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MQRankSum
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ReadPosRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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African
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Latino
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European (Non-Finnish)
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European (Finnish)
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East Asian
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DP
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BaseQRankSum
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ClippingRankSum
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ReadPosRankSum
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MQRankSum
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FS
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MQ
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InbreedingCoeff
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VQSLOD
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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European (Non-Finnish)
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East Asian
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Latino
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African
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South Asian
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Other
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VQSLOD
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ReadPosRankSum
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BaseQRankSum
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InbreedingCoeff
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FS
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MQ
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ClippingRankSum
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DP
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MQRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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African
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South Asian
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European (Finnish)
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Latino
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European (Non-Finnish)
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VQSLOD
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FS
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DP
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InbreedingCoeff
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BaseQRankSum
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QD
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ReadPosRankSum
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ClippingRankSum
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MQRankSum
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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South Asian
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Other
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African
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East Asian
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European (Non-Finnish)
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QD
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ReadPosRankSum
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MQRankSum
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VQSLOD
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FS
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ClippingRankSum
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DP
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MQ
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InbreedingCoeff
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1372
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2810
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1513
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 49937
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 405
bin: 2.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.067961165048543e-5
allele num: 16480
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8514
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10220
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66304
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11510
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 4.183e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.981e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -1.281e0

DP
type: SiteQuality
SIO_000300: 3.562321e6

MQRankSum
type: SiteQuality
SIO_000300: 1.43e0

QD
type: SiteQuality
SIO_000300: 1.289e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.32e-1

MQ
type: SiteQuality
SIO_000300: 5.457e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.3e-2

GenotypeQuality
all individuals: 46
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 29
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 802
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10226
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.213444970270598e-4
allele num: 16482
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66320
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8520
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.099e1

FS
type: SiteQuality
SIO_000300: 5.73e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.27e0

VQSLOD
type: SiteQuality
SIO_000300: -8.733e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.2e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -2.616e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.77e-1

DP
type: SiteQuality
SIO_000300: 3.562926e6

QD
type: SiteQuality
SIO_000300: 1.38e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.69e-1

GenotypeQuality
all individuals: 2788
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1512
bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 49941
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 1372
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 397
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 802
bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8520
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16482
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66320
num of homozygotes: 0

African
type: Population
allele count: 5
allele frequency: 4.889497359671426e-4
allele num: 10226
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.73e-1

QD
type: SiteQuality
SIO_000300: 1.38e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.2e-3

MQRankSum
type: SiteQuality
SIO_000300: 2.27e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.616e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.69e-1

DP
type: SiteQuality
SIO_000300: 3.562926e6

VQSLOD
type: SiteQuality
SIO_000300: -8.733e-1

MQ
type: SiteQuality
SIO_000300: 5.099e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.77e-1

GenotypeQuality
all individuals: 25
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
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variant carriers: 0

GenotypeQuality
all individuals: 390
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GenotypeQuality
all individuals: 1513
bin: 9.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 49941
bin: 9.75e1
variant carriers: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8522
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16484
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11514
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10228
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.507567991316408e-5
allele num: 66332
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.554e0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -2.399e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.34e0

MQRankSum
type: SiteQuality
SIO_000300: 1.11e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.3e0

QD
type: SiteQuality
SIO_000300: 1.243e1

DP
type: SiteQuality
SIO_000300: 3.563107e6

MQ
type: SiteQuality
SIO_000300: 5.734e1

GenotypeQuality
all individuals: 373
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1355
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 7.5e0
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GenotypeQuality
all individuals: 80
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 855
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variant carriers: 0

GenotypeQuality
all individuals: 50035
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 802
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variant carriers: 0

GenotypeQuality
all individuals: 1396
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1245
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 5.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11514
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10242
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.507340749449821e-5
allele num: 66342
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16486
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8524
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.054e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.33e-2

QD
type: SiteQuality
SIO_000300: 1.287e1

VQSLOD
type: SiteQuality
SIO_000300: 1.54e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.03e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.03e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.255e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.63e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 3.583926e6

GenotypeQuality
all individuals: 65
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 373
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 802
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2777
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1396
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 855
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variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 4.75e1
variant carriers: 1

South Asian
type: Population
allele count: 2
allele frequency: 1.213150551983501e-4
allele num: 16486
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8524
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 12
allele frequency: 1.808808899339785e-4
allele num: 66342
num of homozygotes: 0

Latino
type: Population
allele count: 21
allele frequency: 1.823866597186034e-3
allele num: 11514
num of homozygotes: 0

African
type: Population
allele count: 385
allele frequency: 3.759031439172036e-2
allele num: 10242
num of homozygotes: 12

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.287e1

MQ
type: SiteQuality
SIO_000300: 5.054e1

MQRankSum
type: SiteQuality
SIO_000300: -1.255e0

DP
type: SiteQuality
SIO_000300: 3.583926e6

BaseQRankSum
type: SiteQuality
SIO_000300: -3.03e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.33e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.63e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.54e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.03e-1

GenotypeQuality
all individuals: 1245
bin: 7.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1508
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variant carriers: 0

GenotypeQuality
all individuals: 805
bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11518
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.506841058405159e-5
allele num: 66364
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8536
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10248
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16486
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -9.266e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.534e0

MQRankSum
type: SiteQuality
SIO_000300: -4.7e-1

DP
type: SiteQuality
SIO_000300: 3.584117e6

ClippingRankSum
type: SiteQuality
SIO_000300: -9.4e-2

FS
type: SiteQuality
SIO_000300: 1.554e0

QD
type: SiteQuality
SIO_000300: 1.845e1

MQ
type: SiteQuality
SIO_000300: 5.207e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.8e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.07e0

GenotypeQuality
all individuals: 1507
bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 8

GenotypeQuality
all individuals: 76
bin: 5.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66368
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

African
type: Population
allele count: 6
allele frequency: 5.857087075361187e-4
allele num: 10244
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8536
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16486
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.106194690265487e-3
allele num: 904
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.682062858135092e-5
allele num: 11518
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -2.438e0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.48e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.45e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.88e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.02e-1

DP
type: SiteQuality
SIO_000300: 3.584637e6

VQSLOD
type: SiteQuality
SIO_000300: -1.152e0

MQ
type: SiteQuality
SIO_000300: 4.367e1

QD
type: SiteQuality
SIO_000300: 1.329e1

GenotypeQuality
all individuals: 64
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
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variant carriers: 0

GenotypeQuality
all individuals: 3
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 95
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variant carriers: 0

GenotypeQuality
all individuals: 804
bin: 7.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.506750241080039e-5
allele num: 66368
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10244
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8536
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11518
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16486
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.48e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.45e0

MQ
type: SiteQuality
SIO_000300: 4.367e1

MQRankSum
type: SiteQuality
SIO_000300: -2.438e0

VQSLOD
type: SiteQuality
SIO_000300: -1.152e0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.329e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.88e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.02e-1

DP
type: SiteQuality
SIO_000300: 3.584637e6

GenotypeQuality
all individuals: 20
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 59
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GenotypeQuality
all individuals: 860
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 4
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GenotypeQuality
all individuals: 807
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GenotypeQuality
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GenotypeQuality
all individuals: 57
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variant carriers: 0

GenotypeQuality
all individuals: 49994
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 1248
bin: 7.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8536
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10256
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

South Asian
type: Population
allele count: 4
allele frequency: 2.42600679281902e-4
allele num: 16488
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66382
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.674531575294934e-5
allele num: 11528
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.141e1

FS
type: SiteQuality
SIO_000300: 5.36e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.78e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.0e-1

VQSLOD
type: SiteQuality
SIO_000300: -3.382e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.83e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.23e0

QD
type: SiteQuality
SIO_000300: 1.23e1

DP
type: SiteQuality
SIO_000300: 3.585274e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.399999999999999e-3

GenotypeQuality
all individuals: 25
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 840
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 533
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 195
bin: 2.25e1
variant carriers: 1

GenotypeQuality
all individuals: 785
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1955
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 894
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 487
bin: 8.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16480
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10294
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11528
num of homozygotes: 0

East Asian
type: Population
allele count: 3
allele frequency: 3.505491937368544e-4
allele num: 8558
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66432
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.72e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.44e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.8e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.899999999999999e-1

MQ
type: SiteQuality
SIO_000300: 5.211e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.73e-2

DP
type: SiteQuality
SIO_000300: 5.505492e6

MQRankSum
type: SiteQuality
SIO_000300: -5.05e0

QD
type: SiteQuality
SIO_000300: 2.191e1

GenotypeQuality
all individuals: 49
bin: 2.75e1
variant carriers: 19

GenotypeQuality
all individuals: 28
bin: 1.75e1
variant carriers: 23

GenotypeQuality
all individuals: 840
bin: 8.25e1
variant carriers: 50

GenotypeQuality
all individuals: 42
bin: 5.25e1
variant carriers: 35

GenotypeQuality
all individuals: 975
bin: 6.75e1
variant carriers: 51

GenotypeQuality
all individuals: 42
bin: 5.75e1
variant carriers: 35

GenotypeQuality
all individuals: 533
bin: 7.25e1
variant carriers: 34

GenotypeQuality
all individuals: 28
bin: 4.25e1
variant carriers: 19

GenotypeQuality
all individuals: 1955
bin: 6.25e1
variant carriers: 35

GenotypeQuality
all individuals: 894
bin: 9.25e1
variant carriers: 64

GenotypeQuality
all individuals: 53639
bin: 9.75e1
variant carriers: 29473

European (Non-Finnish)
type: Population
allele count: 19666
allele frequency: 2.960320327552987e-1
allele num: 66432
num of homozygotes: 2878

Latino
type: Population
allele count: 3040
allele frequency: 2.63705759888966e-1
allele num: 11528
num of homozygotes: 376

African
type: Population
allele count: 6777
allele frequency: 6.58344666796192e-1
allele num: 10294
num of homozygotes: 2222

East Asian
type: Population
allele count: 731
allele frequency: 8.541715354054685e-2
allele num: 8558
num of homozygotes: 38

South Asian
type: Population
allele count: 3655
allele frequency: 2.217839805825243e-1
allele num: 16480
num of homozygotes: 399

Other
type: Population
allele count: 254
allele frequency: 2.809734513274336e-1
allele num: 904
num of homozygotes: 33

European (Finnish)
type: Population
allele count: 2102
allele frequency: 3.186779866585809e-1
allele num: 6596
num of homozygotes: 324

VQSLOD
type: SiteQuality
SIO_000300: 6.44e-1

MQ
type: SiteQuality
SIO_000300: 5.211e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.73e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.72e-1

MQRankSum
type: SiteQuality
SIO_000300: -5.05e0

QD
type: SiteQuality
SIO_000300: 2.191e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.8e-1

DP
type: SiteQuality
SIO_000300: 5.505492e6

BaseQRankSum
type: SiteQuality
SIO_000300: -6.899999999999999e-1

GenotypeQuality
all individuals: 87
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 947
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 939
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 575
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1041
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 53013
bin: 9.75e1
variant carriers: 71

GenotypeQuality
all individuals: 87
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2045
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 209
bin: 2.25e1
variant carriers: 0

Latino
type: Population
allele count: 2
allele frequency: 1.732201628269531e-4
allele num: 11546
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8560
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 10
allele frequency: 1.503895088278642e-4
allele num: 66494
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.674922600619196e-5
allele num: 10336
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 2
allele frequency: 3.028467595396729e-4
allele num: 6604
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

South Asian
type: Population
allele count: 56
allele frequency: 3.394762366634336e-3
allele num: 16496
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.9e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -1.119e0

DP
type: SiteQuality
SIO_000300: 5.502267e6

MQ
type: SiteQuality
SIO_000300: 5.726e1

MQRankSum
type: SiteQuality
SIO_000300: 1.45e0

VQSLOD
type: SiteQuality
SIO_000300: -4.157e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.95e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.38e-1

FS
type: SiteQuality
SIO_000300: 5.17e-1

QD
type: SiteQuality
SIO_000300: 1.197e1

GenotypeQuality
all individuals: 52
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 209
bin: 2.25e1
variant carriers: 1

GenotypeQuality
all individuals: 14
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 84
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 872
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 519
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 575
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1045
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 86
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2086
bin: 6.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66492
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.661008141347653e-5
allele num: 11546
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10336
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16496
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.33590282644242e-4
allele num: 8562
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 5.499221e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.4e-3

MQ
type: SiteQuality
SIO_000300: 5.092e1

QD
type: SiteQuality
SIO_000300: 3.08e0

VQSLOD
type: SiteQuality
SIO_000300: -3.429e0

MQRankSum
type: SiteQuality
SIO_000300: -3.987e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.4e-2

FS
type: SiteQuality
SIO_000300: 1.556e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.6e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -3.6e-1

GenotypeQuality
all individuals: 52
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 206
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 82
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 89
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 948
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 873
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 518
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1047
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 52992
bin: 9.75e1
variant carriers: 5

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

South Asian
type: Population
allele count: 4
allele frequency: 2.424830261881668e-4
allele num: 16496
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8562
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10336
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.503895088278642e-5
allele num: 66494
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.551e0

MQRankSum
type: SiteQuality
SIO_000300: -2.35e-1

MQ
type: SiteQuality
SIO_000300: 5.755e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.9e-3

DP
type: SiteQuality
SIO_000300: 5.499336e6

ClippingRankSum
type: SiteQuality
SIO_000300: 2.62e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.708e0

VQSLOD
type: SiteQuality
SIO_000300: -5.31e-1

QD
type: SiteQuality
SIO_000300: 1.096e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.79e-1

GenotypeQuality
all individuals: 32
bin: 2.5e0
variant carriers: 7

GenotypeQuality
all individuals: 191
bin: 2.25e1
variant carriers: 25

GenotypeQuality
all individuals: 28
bin: 4.25e1
variant carriers: 20

GenotypeQuality
all individuals: 45
bin: 2.75e1
variant carriers: 19

GenotypeQuality
all individuals: 38
bin: 5.25e1
variant carriers: 34

GenotypeQuality
all individuals: 471
bin: 8.75e1
variant carriers: 45

GenotypeQuality
all individuals: 1973
bin: 6.25e1
variant carriers: 38

GenotypeQuality
all individuals: 53739
bin: 9.75e1
variant carriers: 30941

GenotypeQuality
all individuals: 764
bin: 7.75e1
variant carriers: 32

GenotypeQuality
all individuals: 871
bin: 9.25e1
variant carriers: 67

GenotypeQuality
all individuals: 824
bin: 8.25e1
variant carriers: 56

European (Non-Finnish)
type: Population
allele count: 21043
allele frequency: 3.167027873096141e-1
allele num: 66444
num of homozygotes: 3327

Other
type: Population
allele count: 270
allele frequency: 2.980132450331126e-1
allele num: 906
num of homozygotes: 36

African
type: Population
allele count: 6821
allele frequency: 6.615906886517944e-1
allele num: 10310
num of homozygotes: 2246

South Asian
type: Population
allele count: 4177
allele frequency: 2.534587378640777e-1
allele num: 16480
num of homozygotes: 532

Latino
type: Population
allele count: 3126
allele frequency: 2.711188204683435e-1
allele num: 11530
num of homozygotes: 398

European (Finnish)
type: Population
allele count: 2194
allele frequency: 3.326258338386901e-1
allele num: 6596
num of homozygotes: 349

East Asian
type: Population
allele count: 742
allele frequency: 8.672276764843385e-2
allele num: 8556
num of homozygotes: 37

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 7.73e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.55e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.88e0

QD
type: SiteQuality
SIO_000300: 2.148e1

MQ
type: SiteQuality
SIO_000300: 5.24e1

MQRankSum
type: SiteQuality
SIO_000300: -4.6e0

DP
type: SiteQuality
SIO_000300: 5.677906e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.31e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.25e-1

GenotypeQuality
all individuals: 24
bin: 4.25e1
variant carriers: 15

GenotypeQuality
all individuals: 41
bin: 2.5e0
variant carriers: 12

GenotypeQuality
all individuals: 50
bin: 2.75e1
variant carriers: 21

GenotypeQuality
all individuals: 27
bin: 1.75e1
variant carriers: 25

GenotypeQuality
all individuals: 42
bin: 3.75e1
variant carriers: 29

GenotypeQuality
all individuals: 2108
bin: 6.25e1
variant carriers: 37

GenotypeQuality
all individuals: 547
bin: 7.25e1
variant carriers: 29

GenotypeQuality
all individuals: 36
bin: 5.25e1
variant carriers: 31

GenotypeQuality
all individuals: 53358
bin: 9.75e1
variant carriers: 29462

GenotypeQuality
all individuals: 35
bin: 4.75e1
variant carriers: 29

GenotypeQuality
all individuals: 1024
bin: 6.75e1
variant carriers: 37

East Asian
type: Population
allele count: 729
allele frequency: 8.518345407805562e-2
allele num: 8558
num of homozygotes: 37

African
type: Population
allele count: 6783
allele frequency: 6.584158415841584e-1
allele num: 10302
num of homozygotes: 2223

European (Finnish)
type: Population
allele count: 2105
allele frequency: 3.190360715368293e-1
allele num: 6598
num of homozygotes: 326

South Asian
type: Population
allele count: 3639
allele frequency: 2.207595243872846e-1
allele num: 16484
num of homozygotes: 395

Other
type: Population
allele count: 256
allele frequency: 2.82560706401766e-1
allele num: 906
num of homozygotes: 34

Latino
type: Population
allele count: 3036
allele frequency: 2.633587786259542e-1
allele num: 11528
num of homozygotes: 374

European (Non-Finnish)
type: Population
allele count: 19658
allele frequency: 2.958314522197141e-1
allele num: 66450
num of homozygotes: 2874

DP
type: SiteQuality
SIO_000300: 5.565386e6

MQRankSum
type: SiteQuality
SIO_000300: -4.697e0

VQSLOD
type: SiteQuality
SIO_000300: 8.53e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.552e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.31e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.97e-1

MQ
type: SiteQuality
SIO_000300: 5.231e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.65e-2

QD
type: SiteQuality
SIO_000300: 2.151e1

GenotypeQuality
all individuals: 75
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 286
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2011
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 46601
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 19
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 981
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 928
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1628
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 5.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10304
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16484
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66456
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.168770453482936e-4
allele num: 8556
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 3.640315e6

MQ
type: SiteQuality
SIO_000300: 5.822e1

VQSLOD
type: SiteQuality
SIO_000300: -1.84e0

FS
type: SiteQuality
SIO_000300: 9.050000000000001e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.128e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.2e-3

MQRankSum
type: SiteQuality
SIO_000300: 1.89e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.6e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 2.49e-1

QD
type: SiteQuality
SIO_000300: 8.26e0

GenotypeQuality
all individuals: 17
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 46602
bin: 9.75e1
variant carriers: 13

GenotypeQuality
all individuals: 74
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1721
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2015
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4263
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 5.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

African
type: Population
allele count: 10
allele frequency: 9.703085581214826e-4
allele num: 10306
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8558
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.665511265164645e-5
allele num: 11540
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16484
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.009057262359703e-5
allele num: 66466
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.05e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.48e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.57e0

DP
type: SiteQuality
SIO_000300: 3.640396e6

MQRankSum
type: SiteQuality
SIO_000300: -2.199e0

QD
type: SiteQuality
SIO_000300: 7.26e0

FS
type: SiteQuality
SIO_000300: 5.620000000000001e-1

MQ
type: SiteQuality
SIO_000300: 4.453e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-3

VQSLOD
type: SiteQuality
SIO_000300: -1.861e0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
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GenotypeQuality
all individuals: 979
bin: 8.75e1
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11544
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.504483360414034e-5
allele num: 66468
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16480
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10308
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.584e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.099999999999999e-2

DP
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.232e1

MQ
type: SiteQuality
SIO_000300: 5.781e1

MQRankSum
type: SiteQuality
SIO_000300: 1.23e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.4e-3

VQSLOD
type: SiteQuality
SIO_000300: -1.586e0

GenotypeQuality
all individuals: 979
bin: 8.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

East Asian
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allele frequency: 0.0e0
allele num: 8564
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10308
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16480
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11544
num of homozygotes: 0

European (Non-Finnish)
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allele count: 3
allele frequency: 4.513450081242101e-5
allele num: 66468
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.232e1

DP
type: SiteQuality
SIO_000300: 3.639247e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.4e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: 1.23e0

VQSLOD
type: SiteQuality
SIO_000300: -1.586e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.099999999999999e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -3.26e-1

MQ
type: SiteQuality
SIO_000300: 5.781e1

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10312
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.16767865483419e-4
allele num: 8564
num of homozygotes: 0

European (Non-Finnish)
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allele count: 8
allele frequency: 1.203622904943881e-4
allele num: 66466
num of homozygotes: 0

South Asian
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allele count: 2
allele frequency: 1.213592233009709e-4
allele num: 16480
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11544
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.52e-1

FS
type: SiteQuality
SIO_000300: 2.658e0

QD
type: SiteQuality
SIO_000300: 1.011e1

DP
type: SiteQuality
SIO_000300: 3.639534e6

ClippingRankSum
type: SiteQuality
SIO_000300: 4.89e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.798e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.7e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 2.55e0

MQ
type: SiteQuality
SIO_000300: 5.155e1

MQRankSum
type: SiteQuality
SIO_000300: -4.699e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11544
num of homozygotes: 0

African
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allele count: 1
allele frequency: 9.697439875872769e-5
allele num: 10312
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66466
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8564
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16480
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.89e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.798e0

DP
type: SiteQuality
SIO_000300: 3.639534e6

BaseQRankSum
type: SiteQuality
SIO_000300: 2.55e0

FS
type: SiteQuality
SIO_000300: 2.658e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.7e-3

QD
type: SiteQuality
SIO_000300: 1.011e1

MQ
type: SiteQuality
SIO_000300: 5.155e1

MQRankSum
type: SiteQuality
SIO_000300: -4.699e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.52e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11544
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16480
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66466
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10310
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8564
num of homozygotes: 0

European (Finnish)
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allele count: 1
allele frequency: 1.513775355737209e-4
allele num: 6606
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.6e-1

QD
type: SiteQuality
SIO_000300: 3.468e1

MQ
type: SiteQuality
SIO_000300: 5.333e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.47e-1

FS
type: SiteQuality
SIO_000300: 2.434e0

VQSLOD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: 3.21e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

DP
type: SiteQuality
SIO_000300: 3.638576e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11542
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10312
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16476
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.504392827055001e-5
allele num: 66472
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8564
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

QD
type: SiteQuality
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DP
type: SiteQuality
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ReadPosRankSum
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ClippingRankSum
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MQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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FS
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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MQ
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 1.504936190705514e-5
allele num: 66448
num of homozygotes: 0

South Asian
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Latino
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num of homozygotes: 0

European (Finnish)
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East Asian
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BaseQRankSum
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FS
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VQSLOD
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InbreedingCoeff
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ClippingRankSum
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DP
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MQ
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ReadPosRankSum
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MQRankSum
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QD
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 2
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allele num: 66440
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East Asian
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ClippingRankSum
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BaseQRankSum
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FS
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InbreedingCoeff
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ReadPosRankSum
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VQSLOD
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MQRankSum
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DP
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MQ
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

Latino
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East Asian
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African
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European (Non-Finnish)
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allele num: 66440
num of homozygotes: 0

South Asian
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Other
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ClippingRankSum
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MQ
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VQSLOD
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ReadPosRankSum
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DP
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FS
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BaseQRankSum
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InbreedingCoeff
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MQRankSum
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QD
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 1.505253334136135e-5
allele num: 66434
num of homozygotes: 0

African
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allele frequency: 0.0e0
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South Asian
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Other
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

MQRankSum
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ClippingRankSum
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BaseQRankSum
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FS
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InbreedingCoeff
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DP
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MQ
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VQSLOD
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QD
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele frequency: 0.0e0
allele num: 8564
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11544
num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 904
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European (Non-Finnish)
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allele count: 2
allele frequency: 3.010597302504817e-5
allele num: 66432
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
allele num: 16462
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

African
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allele frequency: 0.0e0
allele num: 10308
num of homozygotes: 0

ClippingRankSum
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ReadPosRankSum
type: SiteQuality
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FS
type: SiteQuality
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InbreedingCoeff
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MQRankSum
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DP
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VQSLOD
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MQ
type: SiteQuality
SIO_000300: 5.695e1

BaseQRankSum
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QD
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SIO_000300: 1.216e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele frequency: 0.0e0
allele num: 11544
num of homozygotes: 0

African
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allele frequency: 0.0e0
allele num: 10308
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East Asian
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allele frequency: 0.0e0
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South Asian
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allele frequency: 3.644757623618029e-4
allele num: 16462
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European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

ClippingRankSum
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DP
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InbreedingCoeff
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BaseQRankSum
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ReadPosRankSum
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MQRankSum
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QD
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FS
type: SiteQuality
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VQSLOD
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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Latino
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allele frequency: 6.062705698943357e-4
allele num: 11546
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East Asian
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 1.505479947007106e-5
allele num: 66424
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ClippingRankSum
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MQRankSum
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MQ
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ReadPosRankSum
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BaseQRankSum
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DP
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InbreedingCoeff
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FS
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VQSLOD
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele frequency: 9.704968944099378e-5
allele num: 10304
num of homozygotes: 0

East Asian
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Other
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allele count: 0
allele frequency: 0.0e0
allele num: 902
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11540
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66416
num of homozygotes: 0

VQSLOD
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FS
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BaseQRankSum
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InbreedingCoeff
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ClippingRankSum
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MQ
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SIO_000300: 4.527e1

MQRankSum
type: SiteQuality
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ReadPosRankSum
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QD
type: SiteQuality
SIO_000300: 1.258e1

DP
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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East Asian
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allele frequency: 0.0e0
allele num: 8564
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European (Non-Finnish)
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allele count: 1
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allele num: 66414
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Other
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allele num: 902
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

MQ
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SIO_000300: 5.796e1

ReadPosRankSum
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BaseQRankSum
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VQSLOD
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InbreedingCoeff
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FS
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MQRankSum
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DP
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QD
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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Other
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European (Non-Finnish)
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allele frequency: 6.023552088666687e-5
allele num: 66406
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Latino
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East Asian
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European (Finnish)
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num of homozygotes: 0

DP
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ClippingRankSum
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VQSLOD
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InbreedingCoeff
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BaseQRankSum
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MQRankSum
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QD
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MQ
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FS
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele num: 66402
num of homozygotes: 0

Latino
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European (Finnish)
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African
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South Asian
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Other
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East Asian
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FS
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DP
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MQ
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QD
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MQRankSum
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BaseQRankSum
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InbreedingCoeff
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VQSLOD
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ClippingRankSum
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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Other
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European (Finnish)
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East Asian
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European (Non-Finnish)
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allele num: 66388
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African
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South Asian
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DP
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VQSLOD
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BaseQRankSum
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FS
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MQ
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MQRankSum
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ClippingRankSum
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InbreedingCoeff
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QD
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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East Asian
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European (Finnish)
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Latino
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South Asian
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European (Non-Finnish)
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allele num: 66380
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ReadPosRankSum
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ClippingRankSum
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InbreedingCoeff
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MQ
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QD
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DP
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VQSLOD
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FS
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MQRankSum
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 5.75e1
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GenotypeQuality
all individuals: 74
bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 971
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 866
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10296
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11538
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8568
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16426
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.50665943470138e-5
allele num: 66372
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 3.618394e6

VQSLOD
type: SiteQuality
SIO_000300: -2.363e0

MQRankSum
type: SiteQuality
SIO_000300: -4.37e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.26e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.96e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.2e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -1.67e0

QD
type: SiteQuality
SIO_000300: 4.5e0

GenotypeQuality
all individuals: 1702
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 441
bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46549
bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
all individuals: 50
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 257
bin: 2.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16420
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11538
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8568
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66358
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.712509712509713e-5
allele num: 10296
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.48e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.6e-3

MQRankSum
type: SiteQuality
SIO_000300: -9.27e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.17e-1

DP
type: SiteQuality
SIO_000300: 3.616594e6

FS
type: SiteQuality
SIO_000300: 4.361e0

VQSLOD
type: SiteQuality
SIO_000300: -1.692e0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.19e-1

QD
type: SiteQuality
SIO_000300: 8.0e0

MQ
type: SiteQuality
SIO_000300: 5.523e1

GenotypeQuality
all individuals: 450
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1666
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1560
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2952
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1701
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 972
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variant carriers: 0

GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
all individuals: 46547
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GenotypeQuality
all individuals: 67
bin: 5.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11536
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.167406023815083e-4
allele num: 8566
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10294
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66358
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16398
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 3.96e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.892e0

MQRankSum
type: SiteQuality
SIO_000300: -8.8e-1

QD
type: SiteQuality
SIO_000300: 1.472e1

MQ
type: SiteQuality
SIO_000300: 5.936e1

DP
type: SiteQuality
SIO_000300: 3.615712e6

VQSLOD
type: SiteQuality
SIO_000300: 1.29e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.38e-1

GenotypeQuality
all individuals: 1534
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 223
bin: 5.25e1
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GenotypeQuality
all individuals: 538
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 1934
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GenotypeQuality
all individuals: 310
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2441
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1575
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 970
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11534
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.014772384684956e-5
allele num: 66340
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10282
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16400
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.167406023815083e-4
allele num: 8566
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.1e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -2.22e0

DP
type: SiteQuality
SIO_000300: 3.610109e6

MQ
type: SiteQuality
SIO_000300: 5.86e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.5e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.8e-1

MQRankSum
type: SiteQuality
SIO_000300: -5.03e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.4e0

QD
type: SiteQuality
SIO_000300: 2.016e1

GenotypeQuality
all individuals: 133
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 803
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1428
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 7.5e0
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GenotypeQuality
all individuals: 350
bin: 4.25e1
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GenotypeQuality
all individuals: 1513
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variant carriers: 0

GenotypeQuality
all individuals: 277
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variant carriers: 0

GenotypeQuality
all individuals: 1933
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 213
bin: 5.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11534
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8564
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66314
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.110228522546743e-5
allele num: 16366
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10280
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.729e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.9e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 3.32e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.87e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.6e-1

VQSLOD
type: SiteQuality
SIO_000300: -9.766e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.503e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 3.608062e6

QD
type: SiteQuality
SIO_000300: 1.665e1

GenotypeQuality
all individuals: 602
bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.095330976472023e-5
allele num: 16406
num of homozygotes: 0

Latino
type: Population
allele count: 4
allele frequency: 3.461405330564209e-4
allele num: 11556
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8630
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 64
allele frequency: 6.595218466611707e-3
allele num: 9704
num of homozygotes: 2

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.562460078474313e-5
allele num: 65754
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.79e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.3e-2

FS
type: SiteQuality
SIO_000300: 3.238e0

QD
type: SiteQuality
SIO_000300: 1.661e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.79e-2

DP
type: SiteQuality
SIO_000300: 5.522235e6

MQ
type: SiteQuality
SIO_000300: 5.487e1

MQRankSum
type: SiteQuality
SIO_000300: 3.93e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.556e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.33e-1

GenotypeQuality
all individuals: 1225
bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 2
allele frequency: 3.024803387779795e-4
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9712
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.040437823046519e-5
allele num: 65780
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8630
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16416
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.16e-1

DP
type: SiteQuality
SIO_000300: 5.524159e6

VQSLOD
type: SiteQuality
SIO_000300: -9.268e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.05e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -3.82e-1

FS
type: SiteQuality
SIO_000300: 1.912e0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.12e0

MQ
type: SiteQuality
SIO_000300: 5.569e1

QD
type: SiteQuality
SIO_000300: 1.396e1

GenotypeQuality
all individuals: 179
bin: 3.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.05761316872428e-4
allele num: 9720
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8628
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.519710647092794e-5
allele num: 65802
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 4.885e1

MQRankSum
type: SiteQuality
SIO_000300: -3.123e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.22e-1

DP
type: SiteQuality
SIO_000300: 5.528055e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.28e-1

QD
type: SiteQuality
SIO_000300: 1.634e1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -1.867e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.936e0

GenotypeQuality
all individuals: 170
bin: 3.75e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.653513326410523e-5
allele num: 11556
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.826817683595177e-4
allele num: 16422
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.600170243813462e-5
allele num: 65788
num of homozygotes: 0

East Asian
type: Population
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allele frequency: 0.0e0
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
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African
type: Population
allele count: 20
allele frequency: 2.056766762649116e-3
allele num: 9724
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.88e0

DP
type: SiteQuality
SIO_000300: 5.529439e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.129999999999999e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.371e0

MQRankSum
type: SiteQuality
SIO_000300: -4.505e0

BaseQRankSum
type: SiteQuality
SIO_000300: 7.97e-1

QD
type: SiteQuality
SIO_000300: 9.6e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.29e-2

MQ
type: SiteQuality
SIO_000300: 5.084e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.64e-1

GenotypeQuality
all individuals: 1514
bin: 6.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8628
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.076995533408283e-5
allele num: 65822
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.826372823572385e-4
allele num: 16426
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.027326895418122e-4
allele num: 9734
num of homozygotes: 0

Other
type: Population
allele count: 0
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allele num: 900
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InbreedingCoeff
type: SiteQuality
SIO_000300: 3.9e-2

MQ
type: SiteQuality
SIO_000300: 5.597e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.24e-1

BaseQRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 5.53011e6

FS
type: SiteQuality
SIO_000300: 8.100000000000001e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.795e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.42e-1

QD
type: SiteQuality
SIO_000300: 1.358e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.91e-1

GenotypeQuality
all individuals: 54074
bin: 9.75e1
variant carriers: 151

Other
type: Population
allele count: 3
allele frequency: 3.333333333333334e-3
allele num: 900
num of homozygotes: 0

South Asian
type: Population
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allele frequency: 0.0e0
allele num: 16428
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9744
num of homozygotes: 0

Latino
type: Population
allele count: 18
allele frequency: 1.557632398753894e-3
allele num: 11556
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8630
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 132
allele frequency: 2.004921170144901e-3
allele num: 65838
num of homozygotes: 1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.46e-1

MQ
type: SiteQuality
SIO_000300: 5.624e1

QD
type: SiteQuality
SIO_000300: 1.203e1

DP
type: SiteQuality
SIO_000300: 5.534901e6

BaseQRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 2.655e0

MQRankSum
type: SiteQuality
SIO_000300: 6.78e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.7e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -9.1e-2

VQSLOD
type: SiteQuality
SIO_000300: -5.3e-3

GenotypeQuality
all individuals: 629
bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.518556763651825e-5
allele num: 65852
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8630
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African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9752
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16426
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