X-54114225-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24054114225
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24054114225
    reference: chr 0
allele count: 2
allele frequency: 2.354880489815142e-5
allele num: 84930
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184083
  ensembl protein: ENSP00000329896
  ensembl transcript: ENST00000328235
  gene symbol: FAM120C
  hgvsc: ENST00000328235.4:c.2427+3520G>A
  variant of: http://identifiers.org/hgnc/16949
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000184083
  ensembl protein: ENSP00000364324
  ensembl transcript: ENST00000375180
  gene symbol: FAM120C
  hgvsc: ENST00000375180.2:c.2600G>A
  hgvsp: ENSP00000364324.2:p.Arg867Gln
  variant of: http://identifiers.org/hgnc/16949
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 1
genotype depth: GenotypeDepth
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  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 1.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 2.5e0
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 7.5e0
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 223
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Arg867Gln
num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 6575
  num of homozygotes: 0
population: European (Finnish)
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum

X-54114236-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24054114236
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24054114236
    reference: chr 0
allele count: 1
allele frequency: 1.163616053247071e-5
allele num: 85939
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000184083
  ensembl protein: ENSP00000364324
  ensembl transcript: ENST00000375180
  gene symbol: FAM120C
  hgvsc: ENST00000375180.2:c.2589T>A
  hgvsp: ENST00000375180.2:c.2589T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16949
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184083
  ensembl protein: ENSP00000329896
  ensembl transcript: ENST00000328235
  gene symbol: FAM120C
  hgvsc: ENST00000328235.4:c.2427+3509T>A
  variant of: http://identifiers.org/hgnc/16949
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2735
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 6.25e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 1
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
hgvs: p.Ile863Ile
num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 9167
  num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: South Asian
population: African
population: Other
reference allele: A
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD

X-54114248-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24054114248
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24054114248
    reference: chr 0
allele count: 1
allele frequency: 1.159581622950439e-5
allele num: 86238
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000184083
  ensembl protein: ENSP00000364324
  ensembl transcript: ENST00000375180
  gene symbol: FAM120C
  hgvsc: ENST00000375180.2:c.2577G>C
  hgvsp: ENSP00000364324.2:p.Gln859His
  variant of: http://identifiers.org/hgnc/16949
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184083
  ensembl protein: ENSP00000329896
  ensembl transcript: ENST00000328235
  gene symbol: FAM120C
  hgvsc: ENST00000328235.4:c.2427+3497G>C
  variant of: http://identifiers.org/hgnc/16949
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 1
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Gln859His
num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 6613
  num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Other
population: African
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: MQ

X-54114278-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24054114278
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24054114278
    reference: chr 0
allele count: 2
allele frequency: 2.322988292139008e-5
allele num: 86096
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184083
  ensembl protein: ENSP00000329896
  ensembl transcript: ENST00000328235
  gene symbol: FAM120C
  hgvsc: ENST00000328235.4:c.2427+3467A>G
  variant of: http://identifiers.org/hgnc/16949
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000184083
  ensembl protein: ENSP00000364324
  ensembl transcript: ENST00000375180
  gene symbol: FAM120C
  hgvsc: ENST00000375180.2:c.2547A>G
  hgvsp: ENST00000375180.2:c.2547A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/16949
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1580
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 448
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hgvs: p.Pro849Pro
num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 2
  allele frequency: 2.069108214359611e-4
  allele num: 9666
  num of homozygotes: 0
population: European (Finnish)
population: Other
population: Latino
population: East Asian
population: European (Non-Finnish)
population: African
reference allele: T
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: DP

X-54114288-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24054114288
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24054114288
    reference: chr 0
allele count: 1
allele frequency: 1.165229550221394e-5
allele num: 85820
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000184083
  ensembl protein: ENSP00000364324
  ensembl transcript: ENST00000375180
  gene symbol: FAM120C
  hgvsc: ENST00000375180.2:c.2537A>G
  hgvsp: ENSP00000364324.2:p.His846Arg
  variant of: http://identifiers.org/hgnc/16949
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184083
  ensembl protein: ENSP00000329896
  ensembl transcript: ENST00000328235
  gene symbol: FAM120C
  hgvsc: ENST00000328235.4:c.2427+3457A>G
  variant of: http://identifiers.org/hgnc/16949
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14533
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.His846Arg
num of homozygotes: 0
population: Other
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 610
  num of homozygotes: 0
population: South Asian
population: Latino
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
reference allele: T
site quality: MQ
site quality: ClippingRankSum
site quality: QD
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site quality: InbreedingCoeff
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site quality: MQRankSum

X-54114331-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24054114331
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24054114331
    reference: chr 0
allele count: 2
allele frequency: 2.408361832281682e-5
allele num: 83044
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184083
  ensembl protein: ENSP00000329896
  ensembl transcript: ENST00000328235
  gene symbol: FAM120C
  hgvsc: ENST00000328235.4:c.2427+3414C>T
  variant of: http://identifiers.org/hgnc/16949
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000184083
  ensembl protein: ENSP00000364324
  ensembl transcript: ENST00000375180
  gene symbol: FAM120C
  hgvsc: ENST00000375180.2:c.2494C>T
  hgvsp: ENST00000375180.2:c.2494C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16949
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
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  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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hgvs: p.Leu832Leu
num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 4232
  num of homozygotes: 0
population: Latino
population: South Asian
population: African
population: European (Non-Finnish)
population: Other
population: East Asian
reference allele: G
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: QD
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X-54114334-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24054114334
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24054114334
    reference: chr 0
allele count: 0
allele frequency: 0.0e0
allele num: 82903
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000184083
  ensembl protein: ENSP00000364324
  ensembl transcript: ENST00000375180
  gene symbol: FAM120C
  hgvsc: ENST00000375180.2:c.2491G>A
  hgvsp: ENSP00000364324.2:p.Ala831Thr
  variant of: http://identifiers.org/hgnc/16949
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184083
  ensembl protein: ENSP00000329896
  ensembl transcript: ENST00000328235
  gene symbol: FAM120C
  hgvsc: ENST00000328235.4:c.2427+3411G>A
  variant of: http://identifiers.org/hgnc/16949
canonical: true
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
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  variant carriers: 1
genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Ala831Thr
num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 8077
  num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Latino
population: South Asian
population: Other
reference allele: C
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff

X-54114341-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24054114341
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24054114341
    reference: chr 0
allele count: 1
allele frequency: 1.212738606320794e-5
allele num: 82458
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000184083
  ensembl protein: ENSP00000364324
  ensembl transcript: ENST00000375180
  gene symbol: FAM120C
  hgvsc: ENST00000375180.2:c.2484C>G
  hgvsp: ENST00000375180.2:c.2484C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/16949
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184083
  ensembl protein: ENSP00000329896
  ensembl transcript: ENST00000328235
  gene symbol: FAM120C
  hgvsc: ENST00000328235.4:c.2427+3404C>G
  variant of: http://identifiers.org/hgnc/16949
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 210
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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hgvs: p.Val828Val
num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 8054
  num of homozygotes: 0
population: East Asian
population: Other
population: South Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: DP
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff

X-54114362-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24054114362
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24054114362
    reference: chr 0
allele count: 1
allele frequency: 1.260827354910292e-5
allele num: 79313
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000184083
  ensembl protein: ENSP00000364324
  ensembl transcript: ENST00000375180
  gene symbol: FAM120C
  hgvsc: ENST00000375180.2:c.2463T>C
  hgvsp: ENST00000375180.2:c.2463T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/16949
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184083
  ensembl protein: ENSP00000329896
  ensembl transcript: ENST00000328235
  gene symbol: FAM120C
  hgvsc: ENST00000328235.4:c.2427+3383T>C
  variant of: http://identifiers.org/hgnc/16949
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 650
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 8.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
hgvs: p.Ala821Ala
num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 7881
  num of homozygotes: 0
population: South Asian
population: Latino
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: ClippingRankSum

X-54114407-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24054114407
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24054114407
    reference: chr 0
allele count: 1
allele frequency: 1.633693290421656e-5
allele num: 61211
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000184083
  ensembl protein: ENSP00000364324
  ensembl transcript: ENST00000375180
  gene symbol: FAM120C
  hgvsc: ENST00000375180.2:c.2428-10G>A
  variant of: http://identifiers.org/hgnc/16949
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184083
  ensembl protein: ENSP00000329896
  ensembl transcript: ENST00000328235
  gene symbol: FAM120C
  hgvsc: ENST00000328235.4:c.2427+3338G>A
  variant of: http://identifiers.org/hgnc/16949
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 5125
  num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: Latino
population: African
population: South Asian
population: European (Finnish)
reference allele: C
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: QD

X-54114440-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24054114440
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24054114440
    reference: chr 0
allele count: 1
allele frequency: 2.749216473305108e-5
allele num: 36374
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000184083
  ensembl protein: ENSP00000364324
  ensembl transcript: ENST00000375180
  gene symbol: FAM120C
  hgvsc: ENST00000375180.2:c.2428-43T>C
  variant of: http://identifiers.org/hgnc/16949
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184083
  ensembl protein: ENSP00000329896
  ensembl transcript: ENST00000328235
  gene symbol: FAM120C
  hgvsc: ENST00000328235.4:c.2427+3305T>C
  variant of: http://identifiers.org/hgnc/16949
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4006
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: African
  type: Population
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  allele frequency: 0.0e0
  allele num: 4322
  num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: QD

X-54114443-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24054114443
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24054114443
    reference: chr 0
allele count: 1
allele frequency: 2.871500358937545e-5
allele num: 34825
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000184083
  ensembl protein: ENSP00000364324
  ensembl transcript: ENST00000375180
  gene symbol: FAM120C
  hgvsc: ENST00000375180.2:c.2428-46G>T
  variant of: http://identifiers.org/hgnc/16949
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184083
  ensembl protein: ENSP00000329896
  ensembl transcript: ENST00000328235
  gene symbol: FAM120C
  hgvsc: ENST00000328235.4:c.2427+3302G>T
  variant of: http://identifiers.org/hgnc/16949
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12972
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 1
  allele frequency: 5.275652862041678e-5
  allele num: 18955
  num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: Other
population: South Asian
population: European (Finnish)
reference allele: C
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum

X-54117694-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24054117694
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24054117694
    reference: chr 0
allele count: 0
allele frequency: 0.0e0
allele num: 66383
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184083
  ensembl protein: ENSP00000329896
  ensembl transcript: ENST00000328235
  gene symbol: FAM120C
  hgvsc: ENST00000328235.4:c.2427+51C>T
  variant of: http://identifiers.org/hgnc/16949
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000184083
  ensembl protein: ENSP00000364324
  ensembl transcript: ENST00000375180
  gene symbol: FAM120C
  hgvsc: ENST00000375180.2:c.2427+51C>T
  variant of: http://identifiers.org/hgnc/16949
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 2100
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 7.25e1
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genotype quality: GenotypeQuality
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  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 6532
  num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Other
population: Latino
reference allele: G
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum

X-54117708-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24054117708
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24054117708
    reference: chr 0
allele count: 10
allele frequency: 1.47931182413941e-4
allele num: 67599
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000184083
  ensembl protein: ENSP00000364324
  ensembl transcript: ENST00000375180
  gene symbol: FAM120C
  hgvsc: ENST00000375180.2:c.2427+37A>G
  variant of: http://identifiers.org/hgnc/16949
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184083
  ensembl protein: ENSP00000329896
  ensembl transcript: ENST00000328235
  gene symbol: FAM120C
  hgvsc: ENST00000328235.4:c.2427+37A>G
  variant of: http://identifiers.org/hgnc/16949
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2056
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
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  bin: 1.75e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 4.25e1
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num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 3698
  num of homozygotes: 0
population: Other
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: T
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum

X-54117712-AG-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24054117712
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24054117711
    reference: chr 0
allele count: 5
allele frequency: 7.349590627802031e-5
allele num: 68031
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000184083
  ensembl protein: ENSP00000364324
  ensembl transcript: ENST00000375180
  gene symbol: FAM120C
  hgvsc: ENST00000375180.2:c.2427+32delC
  variant of: http://identifiers.org/hgnc/16949
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184083
  ensembl protein: ENSP00000329896
  ensembl transcript: ENST00000328235
  gene symbol: FAM120C
  hgvsc: ENST00000328235.4:c.2427+32delC
  variant of: http://identifiers.org/hgnc/16949
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1599
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 5224
  num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: African
population: South Asian
reference allele: AG
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ

X-54117740-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24054117740
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24054117740
    reference: chr 0
allele count: 86861
allele frequency: 9.984941144013243e-1
allele num: 86992
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000184083
  ensembl protein: ENSP00000329896
  ensembl transcript: ENST00000328235
  gene symbol: FAM120C
  hgvsc: ENST00000328235.4:c.2427+5G>T
  variant of: http://identifiers.org/hgnc/16949
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000184083
  ensembl protein: ENSP00000364324
  ensembl transcript: ENST00000375180
  gene symbol: FAM120C
  hgvsc: ENST00000375180.2:c.2427+5G>T
  variant of: http://identifiers.org/hgnc/16949
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 2.5e0
  variant carriers: 33
genotype depth: GenotypeDepth
  all individuals: 2820
  bin: 5.25e1
  variant carriers: 2820
genotype depth: GenotypeDepth
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  variant carriers: 887
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 7612
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 710
genotype depth: GenotypeDepth
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  variant carriers: 364
genotype depth: GenotypeDepth
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  variant carriers: 4212
genotype depth: GenotypeDepth
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  variant carriers: 1276
genotype depth: GenotypeDepth
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  variant carriers: 422
genotype depth: GenotypeDepth
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  variant carriers: 1892
genotype depth: GenotypeDepth
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  variant carriers: 4304
genotype depth: GenotypeDepth
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  variant carriers: 678
genotype depth: GenotypeDepth
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  bin: 2.25e1
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genotype quality: GenotypeQuality
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  variant carriers: 966
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 1365
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 3713
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  variant carriers: 3707
hgvs: c.2427+5G>T
num of homozygotes: 26929
population: South Asian
  type: Population
  allele count: 9876
  allele frequency: 1.0e0
  allele num: 9876
  num of homozygotes: 1869
population: East Asian
population: African
population: Other
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP

X-54117748-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24054117748
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24054117748
    reference: chr 0
allele count: 1
allele frequency: 1.155067860236789e-5
allele num: 86575
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000184083
  ensembl protein: ENSP00000329896
  ensembl transcript: ENST00000328235
  gene symbol: FAM120C
  hgvsc: ENST00000328235.4:c.2424C>T
  hgvsp: ENST00000328235.4:c.2424C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16949
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000184083
  ensembl protein: ENSP00000364324
  ensembl transcript: ENST00000375180
  gene symbol: FAM120C
  hgvsc: ENST00000375180.2:c.2424C>T
  hgvsp: ENST00000375180.2:c.2424C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16949
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 6327
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  variant carriers: 0
hgvs: p.Leu808Leu
num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 9221
  num of homozygotes: 0
population: South Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: East Asian
reference allele: G
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD

X-54117761-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24054117761
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24054117761
    reference: chr 0
allele count: 1
allele frequency: 1.154707743470128e-5
allele num: 86602
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184083
  ensembl protein: ENSP00000329896
  ensembl transcript: ENST00000328235
  gene symbol: FAM120C
  hgvsc: ENST00000328235.4:c.2411G>A
  hgvsp: ENSP00000329896.4:p.Arg804Gln
  variant of: http://identifiers.org/hgnc/16949
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000184083
  ensembl protein: ENSP00000364324
  ensembl transcript: ENST00000375180
  gene symbol: FAM120C
  hgvsc: ENST00000375180.2:c.2411G>A
  hgvsp: ENSP00000364324.2:p.Arg804Gln
  variant of: http://identifiers.org/hgnc/16949
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
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  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.25e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
hgvs: p.Arg804Gln
num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 9722
  num of homozygotes: 0
population: Other
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
reference allele: C
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ

X-54117772-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24054117772
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24054117772
    reference: chr 0
allele count: 1
allele frequency: 1.15350897429982e-5
allele num: 86692
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000184083
  ensembl protein: ENSP00000364324
  ensembl transcript: ENST00000375180
  gene symbol: FAM120C
  hgvsc: ENST00000375180.2:c.2400T>C
  hgvsp: ENST00000375180.2:c.2400T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/16949
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000184083
  ensembl protein: ENSP00000329896
  ensembl transcript: ENST00000328235
  gene symbol: FAM120C
  hgvsc: ENST00000328235.4:c.2400T>C
  hgvsp: ENST00000328235.4:c.2400T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/16949
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 232
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  variant carriers: 0
hgvs: p.Tyr800Tyr
num of homozygotes: 0
population: Other
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 621
  num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: African
population: Latino
population: South Asian
reference allele: A
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ

X-54117806-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24054117806
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24054117806
    reference: chr 0
allele count: 1
allele frequency: 1.155855564288687e-5
allele num: 86516
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184083
  ensembl protein: ENSP00000329896
  ensembl transcript: ENST00000328235
  gene symbol: FAM120C
  hgvsc: ENST00000328235.4:c.2366C>G
  hgvsp: ENSP00000329896.4:p.Thr789Ser
  variant of: http://identifiers.org/hgnc/16949
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000184083
  ensembl protein: ENSP00000364324
  ensembl transcript: ENST00000375180
  gene symbol: FAM120C
  hgvsc: ENST00000375180.2:c.2366C>G
  hgvsp: ENSP00000364324.2:p.Thr789Ser
  variant of: http://identifiers.org/hgnc/16949
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
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  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Thr789Ser
num of homozygotes: 0
population: African
  type: Population
  allele count: 1
  allele frequency: 1.187225454113736e-4
  allele num: 8423
  num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Other
population: Latino
population: European (Finnish)
reference allele: G
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD

X-54117821-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24054117821
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24054117821
    reference: chr 0
allele count: 2
allele frequency: 2.325689566956603e-5
allele num: 85996
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000184083
  ensembl protein: ENSP00000364324
  ensembl transcript: ENST00000375180
  gene symbol: FAM120C
  hgvsc: ENST00000375180.2:c.2351G>A
  hgvsp: ENSP00000364324.2:p.Arg784His
  variant of: http://identifiers.org/hgnc/16949
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184083
  ensembl protein: ENSP00000329896
  ensembl transcript: ENST00000328235
  gene symbol: FAM120C
  hgvsc: ENST00000328235.4:c.2351G>A
  hgvsp: ENSP00000329896.4:p.Arg784His
  variant of: http://identifiers.org/hgnc/16949
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Arg784His
num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 1
  allele frequency: 1.041232819658476e-4
  allele num: 9604
  num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: Other
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP

X-54117822-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24054117822
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24054117822
    reference: chr 0
allele count: 1
allele frequency: 1.163724383517008e-5
allele num: 85931
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000184083
  ensembl protein: ENSP00000364324
  ensembl transcript: ENST00000375180
  gene symbol: FAM120C
  hgvsc: ENST00000375180.2:c.2350C>T
  hgvsp: ENSP00000364324.2:p.Arg784Cys
  variant of: http://identifiers.org/hgnc/16949
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184083
  ensembl protein: ENSP00000329896
  ensembl transcript: ENST00000328235
  gene symbol: FAM120C
  hgvsc: ENST00000328235.4:c.2350C>T
  hgvsp: ENSP00000329896.4:p.Arg784Cys
  variant of: http://identifiers.org/hgnc/16949
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1767
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Arg784Cys
num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 8390
  num of homozygotes: 0
population: European (Finnish)
population: Other
population: South Asian
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: MQ

X-54117835-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24054117835
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24054117835
    reference: chr 0
allele count: 1
allele frequency: 1.180874555695948e-5
allele num: 84683
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000184083
  ensembl protein: ENSP00000329896
  ensembl transcript: ENST00000328235
  gene symbol: FAM120C
  hgvsc: ENST00000328235.4:c.2337C>G
  hgvsp: ENST00000328235.4:c.2337C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/16949
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000184083
  ensembl protein: ENSP00000364324
  ensembl transcript: ENST00000375180
  gene symbol: FAM120C
  hgvsc: ENST00000375180.2:c.2337C>G
  hgvsp: ENST00000375180.2:c.2337C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/16949
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 35
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Gly779Gly
num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 8324
  num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Latino
population: Other
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
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X-54117853-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24054117853
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24054117853
    reference: chr 0
allele count: 1
allele frequency: 1.227144434899988e-5
allele num: 81490
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184083
  ensembl protein: ENSP00000329896
  ensembl transcript: ENST00000328235
  gene symbol: FAM120C
  hgvsc: ENST00000328235.4:c.2319G>C
  hgvsp: ENSP00000329896.4:p.Met773Ile
  variant of: http://identifiers.org/hgnc/16949
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000184083
  ensembl protein: ENSP00000364324
  ensembl transcript: ENST00000375180
  gene symbol: FAM120C
  hgvsc: ENST00000375180.2:c.2319G>C
  hgvsp: ENSP00000364324.2:p.Met773Ile
  variant of: http://identifiers.org/hgnc/16949
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
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  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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hgvs: p.Met773Ile
num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 8768
  num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: African
population: Other
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: MQ

X-54117873-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24054117873
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24054117873
    reference: chr 0
allele count: 1
allele frequency: 1.321754761621529e-5
allele num: 75657
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000184083
  ensembl protein: ENSP00000364324
  ensembl transcript: ENST00000375180
  gene symbol: FAM120C
  hgvsc: ENST00000375180.2:c.2313-14C>G
  variant of: http://identifiers.org/hgnc/16949
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184083
  ensembl protein: ENSP00000329896
  ensembl transcript: ENST00000328235
  gene symbol: FAM120C
  hgvsc: ENST00000328235.4:c.2313-14C>G
  variant of: http://identifiers.org/hgnc/16949
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9931
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 8000
  num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: European (Non-Finnish)
population: Other
population: African
reference allele: G
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: QD

X-54117874-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24054117874
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24054117874
    reference: chr 0
allele count: 1
allele frequency: 1.328144714648108e-5
allele num: 75293
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184083
  ensembl protein: ENSP00000329896
  ensembl transcript: ENST00000328235
  gene symbol: FAM120C
  hgvsc: ENST00000328235.4:c.2313-15G>A
  variant of: http://identifiers.org/hgnc/16949
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000184083
  ensembl protein: ENSP00000364324
  ensembl transcript: ENST00000375180
  gene symbol: FAM120C
  hgvsc: ENST00000375180.2:c.2313-15G>A
  variant of: http://identifiers.org/hgnc/16949
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5608
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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population: European (Finnish)
population: Latino
population: East Asian
population: European (Non-Finnish)
population: Other
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site quality: MQRankSum
site quality: BaseQRankSum
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site quality: InbreedingCoeff
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X-54117881-A-T
type: Variant
location: Region
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    type: ExactPosition
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allele count: 0
allele frequency: 0.0e0
allele num: 72919
alternate allele: T
annotation: Annotation
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  gene symbol: FAM120C
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  variant of: http://identifiers.org/hgnc/16949
annotation: Annotation
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  consequence: intron_variant
  ensembl gene: ENSG00000184083
  ensembl protein: ENSP00000329896
  ensembl transcript: ENST00000328235
  gene symbol: FAM120C
  hgvsc: ENST00000328235.4:c.2313-22T>A
  variant of: http://identifiers.org/hgnc/16949
canonical: true
consequence: intron
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genotype depth: GenotypeDepth
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population: African
population: East Asian
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X-54117904-T-C
type: Variant
location: Region
  begin: Position
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allele num: 63964
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annotation: Annotation
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annotation: Annotation
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  variant of: http://identifiers.org/hgnc/16949
canonical: true
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population: European (Non-Finnish)
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site quality: FS
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X-54117910-T-C
type: Variant
location: Region
  begin: Position
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    position: 24054117910
    reference: chr 0
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allele count: 1
allele frequency: 1.632546445946387e-5
allele num: 61254
alternate allele: C
annotation: Annotation
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  ensembl transcript: ENST00000375180
  gene symbol: FAM120C
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  variant of: http://identifiers.org/hgnc/16949
annotation: Annotation
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  gene symbol: FAM120C
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  variant of: http://identifiers.org/hgnc/16949
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
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X-54142927-T-C
type: Variant
location: Region
  begin: Position
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alternate allele: C
annotation: Annotation
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annotation: Annotation
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canonical: true
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  bin: 2.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 7.75e1
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genotype quality: GenotypeQuality
  all individuals: 398
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2173
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 7377
  num of homozygotes: 0
population: European (Finnish)
population: Latino
population: Other
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: T
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: MQ

X-54142928-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24054142928
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24054142928
    reference: chr 0
allele count: 5
allele frequency: 7.396230880743173e-5
allele num: 67602
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000184083
  ensembl protein: ENSP00000364324
  ensembl transcript: ENST00000375180
  gene symbol: FAM120C
  hgvsc: ENST00000375180.2:c.2312+50T>A
  variant of: http://identifiers.org/hgnc/16949
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184083
  ensembl protein: ENSP00000329896
  ensembl transcript: ENST00000328235
  gene symbol: FAM120C
  hgvsc: ENST00000328235.4:c.2312+50T>A
  variant of: http://identifiers.org/hgnc/16949
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4590
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  variant carriers: 2
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 6
num of homozygotes: 0
population: Other
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 463
  num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
population: South Asian
reference allele: A
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: ClippingRankSum

X-54142933-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24054142933
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24054142933
    reference: chr 0
allele count: 1
allele frequency: 1.461710493619634e-5
allele num: 68413
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184083
  ensembl protein: ENSP00000329896
  ensembl transcript: ENST00000328235
  gene symbol: FAM120C
  hgvsc: ENST00000328235.4:c.2312+45T>C
  variant of: http://identifiers.org/hgnc/16949
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000184083
  ensembl protein: ENSP00000364324
  ensembl transcript: ENST00000375180
  gene symbol: FAM120C
  hgvsc: ENST00000375180.2:c.2312+45T>C
  variant of: http://identifiers.org/hgnc/16949
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15643
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 5600
  num of homozygotes: 0
population: East Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
reference allele: A
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD

X-54142935-GT-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24054142935
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24054142934
    reference: chr 0
allele count: 1
allele frequency: 1.462843768285547e-5
allele num: 68360
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000184083
  ensembl protein: ENSP00000364324
  ensembl transcript: ENST00000375180
  gene symbol: FAM120C
  hgvsc: ENST00000375180.2:c.2312+42delA
  variant of: http://identifiers.org/hgnc/16949
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184083
  ensembl protein: ENSP00000329896
  ensembl transcript: ENST00000328235
  gene symbol: FAM120C
  hgvsc: ENST00000328235.4:c.2312+42delA
  variant of: http://identifiers.org/hgnc/16949
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 515
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 7421
  num of homozygotes: 0
population: European (Finnish)
population: Other
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
reference allele: GT
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum

X-54142941-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24054142941
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24054142941
    reference: chr 0
allele count: 1
allele frequency: 1.445337341735561e-5
allele num: 69188
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000184083
  ensembl protein: ENSP00000364324
  ensembl transcript: ENST00000375180
  gene symbol: FAM120C
  hgvsc: ENST00000375180.2:c.2312+37C>G
  variant of: http://identifiers.org/hgnc/16949
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184083
  ensembl protein: ENSP00000329896
  ensembl transcript: ENST00000328235
  gene symbol: FAM120C
  hgvsc: ENST00000328235.4:c.2312+37C>G
  variant of: http://identifiers.org/hgnc/16949
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2495
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 3668
  num of homozygotes: 0
population: African
population: Latino
population: European (Non-Finnish)
population: Other
population: East Asian
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum

X-54142970-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24054142970
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24054142970
    reference: chr 0
allele count: 1
allele frequency: 1.276829377290313e-5
allele num: 78319
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000184083
  ensembl protein: ENSP00000329896
  ensembl transcript: ENST00000328235
  gene symbol: FAM120C
  hgvsc: ENST00000328235.4:c.2312+8A>G
  variant of: http://identifiers.org/hgnc/16949
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000184083
  ensembl protein: ENSP00000364324
  ensembl transcript: ENST00000375180
  gene symbol: FAM120C
  hgvsc: ENST00000375180.2:c.2312+8A>G
  variant of: http://identifiers.org/hgnc/16949
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
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  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: c.2312+8A>G
num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 8471
  num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: T
site quality: MQ
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP

X-54142995-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24054142995
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24054142995
    reference: chr 0
allele count: 1
allele frequency: 1.198868268354673e-5
allele num: 83412
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000184083
  ensembl protein: ENSP00000364324
  ensembl transcript: ENST00000375180
  gene symbol: FAM120C
  hgvsc: ENST00000375180.2:c.2295C>T
  hgvsp: ENST00000375180.2:c.2295C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16949
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000184083
  ensembl protein: ENSP00000329896
  ensembl transcript: ENST00000328235
  gene symbol: FAM120C
  hgvsc: ENST00000328235.4:c.2295C>T
  hgvsp: ENST00000328235.4:c.2295C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16949
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Leu765Leu
num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 8234
  num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: G
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: FS
site quality: MQ

X-54143010-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24054143010
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24054143010
    reference: chr 0
allele count: 2
allele frequency: 2.35743416865084e-5
allele num: 84838
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000184083
  ensembl protein: ENSP00000329896
  ensembl transcript: ENST00000328235
  gene symbol: FAM120C
  hgvsc: ENST00000328235.4:c.2280C>T
  hgvsp: ENST00000328235.4:c.2280C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16949
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000184083
  ensembl protein: ENSP00000364324
  ensembl transcript: ENST00000375180
  gene symbol: FAM120C
  hgvsc: ENST00000375180.2:c.2280C>T
  hgvsp: ENST00000375180.2:c.2280C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16949
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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hgvs: p.Pro760Pro
num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 9075
  num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Other
population: South Asian
population: African
population: European (Finnish)
reference allele: G
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum

X-54143040-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24054143040
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24054143040
    reference: chr 0
allele count: 1
allele frequency: 1.159581622950439e-5
allele num: 86238
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000184083
  ensembl protein: ENSP00000329896
  ensembl transcript: ENST00000328235
  gene symbol: FAM120C
  hgvsc: ENST00000328235.4:c.2250G>T
  hgvsp: ENST00000328235.4:c.2250G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16949
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000184083
  ensembl protein: ENSP00000364324
  ensembl transcript: ENST00000375180
  gene symbol: FAM120C
  hgvsc: ENST00000375180.2:c.2250G>T
  hgvsp: ENST00000375180.2:c.2250G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16949
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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hgvs: p.Thr750Thr
num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 9199
  num of homozygotes: 0
population: Other
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
reference allele: C
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: QD

X-54143046-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24054143046
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24054143046
    reference: chr 0
allele count: 4
allele frequency: 4.619097659272261e-5
allele num: 86597
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000184083
  ensembl protein: ENSP00000329896
  ensembl transcript: ENST00000328235
  gene symbol: FAM120C
  hgvsc: ENST00000328235.4:c.2244G>A
  hgvsp: ENST00000328235.4:c.2244G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16949
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000184083
  ensembl protein: ENSP00000364324
  ensembl transcript: ENST00000375180
  gene symbol: FAM120C
  hgvsc: ENST00000375180.2:c.2244G>A
  hgvsp: ENST00000375180.2:c.2244G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16949
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2531
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Ser748Ser
num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 4467
  num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: African
population: East Asian
population: Latino
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: ClippingRankSum

X-54143055-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24054143055
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24054143055
    reference: chr 0
allele count: 4
allele frequency: 4.599181345720462e-5
allele num: 86972
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000184083
  ensembl protein: ENSP00000364324
  ensembl transcript: ENST00000375180
  gene symbol: FAM120C
  hgvsc: ENST00000375180.2:c.2235T>C
  hgvsp: ENST00000375180.2:c.2235T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/16949
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000184083
  ensembl protein: ENSP00000329896
  ensembl transcript: ENST00000328235
  gene symbol: FAM120C
  hgvsc: ENST00000328235.4:c.2235T>C
  hgvsp: ENST00000328235.4:c.2235T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/16949
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 274
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hgvs: p.Cys745Cys
num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 8461
  num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: Latino
population: South Asian
reference allele: A
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: QD

X-54143081-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24054143081
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24054143081
    reference: chr 0
allele count: 1
allele frequency: 1.142609033467019e-5
allele num: 87519
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000184083
  ensembl protein: ENSP00000364324
  ensembl transcript: ENST00000375180
  gene symbol: FAM120C
  hgvsc: ENST00000375180.2:c.2209A>G
  hgvsp: ENSP00000364324.2:p.Arg737Gly
  variant of: http://identifiers.org/hgnc/16949
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184083
  ensembl protein: ENSP00000329896
  ensembl transcript: ENST00000328235
  gene symbol: FAM120C
  hgvsc: ENST00000328235.4:c.2209A>G
  hgvsp: ENSP00000329896.4:p.Arg737Gly
  variant of: http://identifiers.org/hgnc/16949
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
hgvs: p.Arg737Gly
num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 10017
  num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: African
population: Other
population: European (Non-Finnish)
reference allele: T
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum

X-54143088-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24054143088
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24054143088
    reference: chr 0
allele count: 1
allele frequency: 1.141748016212822e-5
allele num: 87585
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000184083
  ensembl protein: ENSP00000364324
  ensembl transcript: ENST00000375180
  gene symbol: FAM120C
  hgvsc: ENST00000375180.2:c.2202C>G
  hgvsp: ENSP00000364324.2:p.Asp734Glu
  variant of: http://identifiers.org/hgnc/16949
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184083
  ensembl protein: ENSP00000329896
  ensembl transcript: ENST00000328235
  gene symbol: FAM120C
  hgvsc: ENST00000328235.4:c.2202C>G
  hgvsp: ENSP00000329896.4:p.Asp734Glu
  variant of: http://identifiers.org/hgnc/16949
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36557
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 82
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hgvs: p.Asp734Glu
num of homozygotes: 0
population: Other
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 631
  num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: African
population: Latino
reference allele: G
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum

X-54143115-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24054143115
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24054143115
    reference: chr 0
allele count: 1
allele frequency: 1.140406897180914e-5
allele num: 87688
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184083
  ensembl protein: ENSP00000329896
  ensembl transcript: ENST00000328235
  gene symbol: FAM120C
  hgvsc: ENST00000328235.4:c.2175G>C
  hgvsp: ENSP00000329896.4:p.Lys725Asn
  variant of: http://identifiers.org/hgnc/16949
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000184083
  ensembl protein: ENSP00000364324
  ensembl transcript: ENST00000375180
  gene symbol: FAM120C
  hgvsc: ENST00000375180.2:c.2175G>C
  hgvsp: ENSP00000364324.2:p.Lys725Asn
  variant of: http://identifiers.org/hgnc/16949
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Lys725Asn
num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 6636
  num of homozygotes: 0
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: African
population: Other
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: QD

X-54143121-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24054143121
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24054143121
    reference: chr 0
allele count: 1
allele frequency: 1.140328870846352e-5
allele num: 87694
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000184083
  ensembl protein: ENSP00000329896
  ensembl transcript: ENST00000328235
  gene symbol: FAM120C
  hgvsc: ENST00000328235.4:c.2169C>G
  hgvsp: ENST00000328235.4:c.2169C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/16949
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000184083
  ensembl protein: ENSP00000364324
  ensembl transcript: ENST00000375180
  gene symbol: FAM120C
  hgvsc: ENST00000375180.2:c.2169C>G
  hgvsp: ENST00000375180.2:c.2169C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/16949
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
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  bin: 7.75e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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hgvs: p.Leu723Leu
num of homozygotes: 0
population: Latino
  type: Population
  allele count: 1
  allele frequency: 1.073652566029633e-4
  allele num: 9314
  num of homozygotes: 0
population: East Asian
population: South Asian
population: Other
population: African
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: DP
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site quality: QD

X-54143121-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24054143121
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24054143121
    reference: chr 0
allele count: 1
allele frequency: 1.140328870846352e-5
allele num: 87694
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000184083
  ensembl protein: ENSP00000364324
  ensembl transcript: ENST00000375180
  gene symbol: FAM120C
  hgvsc: ENST00000375180.2:c.2169C>A
  hgvsp: ENST00000375180.2:c.2169C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16949
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000184083
  ensembl protein: ENSP00000329896
  ensembl transcript: ENST00000328235
  gene symbol: FAM120C
  hgvsc: ENST00000328235.4:c.2169C>A
  hgvsp: ENST00000328235.4:c.2169C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16949
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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hgvs: p.Leu723Leu
num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 1
  allele frequency: 2.084245190604223e-5
  allele num: 47979
  num of homozygotes: 0
population: Other
population: African
population: South Asian
population: Latino
population: European (Finnish)
population: East Asian
reference allele: G
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD

X-54143124-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24054143124
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24054143124
    reference: chr 0
allele count: 1
allele frequency: 1.14028986168284e-5
allele num: 87697
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000184083
  ensembl protein: ENSP00000364324
  ensembl transcript: ENST00000375180
  gene symbol: FAM120C
  hgvsc: ENST00000375180.2:c.2166C>T
  hgvsp: ENST00000375180.2:c.2166C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16949
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000184083
  ensembl protein: ENSP00000329896
  ensembl transcript: ENST00000328235
  gene symbol: FAM120C
  hgvsc: ENST00000328235.4:c.2166C>T
  hgvsp: ENST00000328235.4:c.2166C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16949
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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hgvs: p.Asn722Asn
num of homozygotes: 0
population: Latino
  type: Population
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  allele frequency: 0.0e0
  allele num: 9314
  num of homozygotes: 0
population: African
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: G
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: MQ

X-54143139-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24054143139
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24054143139
    reference: chr 0
allele count: 1
allele frequency: 1.140185850293598e-5
allele num: 87705
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000184083
  ensembl protein: ENSP00000364324
  ensembl transcript: ENST00000375180
  gene symbol: FAM120C
  hgvsc: ENST00000375180.2:c.2151A>T
  hgvsp: ENSP00000364324.2:p.Glu717Asp
  variant of: http://identifiers.org/hgnc/16949
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184083
  ensembl protein: ENSP00000329896
  ensembl transcript: ENST00000328235
  gene symbol: FAM120C
  hgvsc: ENST00000328235.4:c.2151A>T
  hgvsp: ENSP00000329896.4:p.Glu717Asp
  variant of: http://identifiers.org/hgnc/16949
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
hgvs: p.Glu717Asp
num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 4529
  num of homozygotes: 0
population: Other
population: East Asian
population: African
population: South Asian
population: European (Non-Finnish)
population: Latino
reference allele: T
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: DP

X-54143148-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24054143148
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24054143148
    reference: chr 0
allele count: 1
allele frequency: 1.140016872249709e-5
allele num: 87718
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000184083
  ensembl protein: ENSP00000329896
  ensembl transcript: ENST00000328235
  gene symbol: FAM120C
  hgvsc: ENST00000328235.4:c.2142A>G
  hgvsp: ENST00000328235.4:c.2142A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/16949
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000184083
  ensembl protein: ENSP00000364324
  ensembl transcript: ENST00000375180
  gene symbol: FAM120C
  hgvsc: ENST00000375180.2:c.2142A>G
  hgvsp: ENST00000375180.2:c.2142A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/16949
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Thr714Thr
num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 8515
  num of homozygotes: 0
population: Other
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Latino
population: East Asian
reference allele: T
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
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site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: QD

X-54143154-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24054143154
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24054143154
    reference: chr 0
allele count: 7
allele frequency: 7.979936160510716e-5
allele num: 87720
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000184083
  ensembl protein: ENSP00000364324
  ensembl transcript: ENST00000375180
  gene symbol: FAM120C
  hgvsc: ENST00000375180.2:c.2136A>G
  hgvsp: ENST00000375180.2:c.2136A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/16949
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000184083
  ensembl protein: ENSP00000329896
  ensembl transcript: ENST00000328235
  gene symbol: FAM120C
  hgvsc: ENST00000328235.4:c.2136A>G
  hgvsp: ENST00000328235.4:c.2136A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/16949
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Ala712Ala
num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 4529
  num of homozygotes: 0
population: Other
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Latino
population: African
reference allele: T
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
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site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
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X-54143163-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24054143163
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24054143163
    reference: chr 0
allele count: 1
allele frequency: 1.140198850679558e-5
allele num: 87704
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000184083
  ensembl protein: ENSP00000364324
  ensembl transcript: ENST00000375180
  gene symbol: FAM120C
  hgvsc: ENST00000375180.2:c.2127G>A
  hgvsp: ENST00000375180.2:c.2127G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16949
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000184083
  ensembl protein: ENSP00000329896
  ensembl transcript: ENST00000328235
  gene symbol: FAM120C
  hgvsc: ENST00000328235.4:c.2127G>A
  hgvsp: ENST00000328235.4:c.2127G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16949
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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hgvs: p.Leu709Leu
num of homozygotes: 0
population: African
  type: Population
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  allele frequency: 0.0e0
  allele num: 8513
  num of homozygotes: 0
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Latino
reference allele: C
site quality: MQRankSum
site quality: FS
site quality: DP
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site quality: ReadPosRankSum
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X-54143172-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24054143172
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24054143172
    reference: chr 0
allele count: 1
allele frequency: 1.140628029793204e-5
allele num: 87671
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000184083
  ensembl protein: ENSP00000364324
  ensembl transcript: ENST00000375180
  gene symbol: FAM120C
  hgvsc: ENST00000375180.2:c.2118C>G
  hgvsp: ENST00000375180.2:c.2118C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/16949
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000184083
  ensembl protein: ENSP00000329896
  ensembl transcript: ENST00000328235
  gene symbol: FAM120C
  hgvsc: ENST00000328235.4:c.2118C>G
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  variant of: http://identifiers.org/hgnc/16949
canonical: true
consequence: synonymous
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genotype depth: GenotypeDepth
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  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 639
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Thr706Thr
num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 47954
  num of homozygotes: 0
population: European (Finnish)
population: African
population: Other
population: Latino
population: East Asian
population: South Asian
reference allele: G
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD

X-54143197-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24054143197
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24054143197
    reference: chr 0
allele count: 2
allele frequency: 2.285897157486885e-5
allele num: 87493
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184083
  ensembl protein: ENSP00000329896
  ensembl transcript: ENST00000328235
  gene symbol: FAM120C
  hgvsc: ENST00000328235.4:c.2093C>T
  hgvsp: ENSP00000329896.4:p.Ala698Val
  variant of: http://identifiers.org/hgnc/16949
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000184083
  ensembl protein: ENSP00000364324
  ensembl transcript: ENST00000375180
  gene symbol: FAM120C
  hgvsc: ENST00000375180.2:c.2093C>T
  hgvsp: ENSP00000364324.2:p.Ala698Val
  variant of: http://identifiers.org/hgnc/16949
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 35573
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 2.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 9.75e1
  variant carriers: 1
hgvs: p.Ala698Val
num of homozygotes: 1
population: European (Non-Finnish)
  type: Population
  allele count: 2
  allele frequency: 4.176673279732693e-5
  allele num: 47885
  num of homozygotes: 1
population: Other
population: Latino
population: European (Finnish)
population: East Asian
population: South Asian
population: African
reference allele: G
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: InbreedingCoeff

X-54143220-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24054143220
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24054143220
    reference: chr 0
allele count: 1
allele frequency: 1.155989179941276e-5
allele num: 86506
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000184083
  ensembl protein: ENSP00000364324
  ensembl transcript: ENST00000375180
  gene symbol: FAM120C
  hgvsc: ENST00000375180.2:c.2070A>T
  hgvsp: ENST00000375180.2:c.2070A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16949
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000184083
  ensembl protein: ENSP00000329896
  ensembl transcript: ENST00000328235
  gene symbol: FAM120C
  hgvsc: ENST00000328235.4:c.2070A>T
  hgvsp: ENST00000328235.4:c.2070A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16949
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 1631
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Ser690Ser
num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 6618
  num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: African
population: South Asian
population: European (Finnish)
population: Other
reference allele: T
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: MQ

X-54143243-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24054143243
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24054143243
    reference: chr 0
allele count: 1
allele frequency: 1.172786658378974e-5
allele num: 85267
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184083
  ensembl protein: ENSP00000329896
  ensembl transcript: ENST00000328235
  gene symbol: FAM120C
  hgvsc: ENST00000328235.4:c.2063-16A>G
  variant of: http://identifiers.org/hgnc/16949
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000184083
  ensembl protein: ENSP00000364324
  ensembl transcript: ENST00000375180
  gene symbol: FAM120C
  hgvsc: ENST00000375180.2:c.2063-16A>G
  variant of: http://identifiers.org/hgnc/16949
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1267
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: African
  type: Population
  allele count: 1
  allele frequency: 1.202501202501203e-4
  allele num: 8316
  num of homozygotes: 0
population: East Asian
population: Latino
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: T
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum

X-54143248-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24054143248
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24054143248
    reference: chr 0
allele count: 1
allele frequency: 1.177218468203329e-5
allele num: 84946
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184083
  ensembl protein: ENSP00000329896
  ensembl transcript: ENST00000328235
  gene symbol: FAM120C
  hgvsc: ENST00000328235.4:c.2063-21T>C
  variant of: http://identifiers.org/hgnc/16949
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000184083
  ensembl protein: ENSP00000364324
  ensembl transcript: ENST00000375180
  gene symbol: FAM120C
  hgvsc: ENST00000375180.2:c.2063-21T>C
  variant of: http://identifiers.org/hgnc/16949
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 8713
  num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Latino
population: African
population: Other
reference allele: A
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: DP

X-54143257-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24054143257
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24054143257
    reference: chr 0
allele count: 1
allele frequency: 1.188537742015998e-5
allele num: 84137
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184083
  ensembl protein: ENSP00000329896
  ensembl transcript: ENST00000328235
  gene symbol: FAM120C
  hgvsc: ENST00000328235.4:c.2063-30G>A
  variant of: http://identifiers.org/hgnc/16949
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000184083
  ensembl protein: ENSP00000364324
  ensembl transcript: ENST00000375180
  gene symbol: FAM120C
  hgvsc: ENST00000375180.2:c.2063-30G>A
  variant of: http://identifiers.org/hgnc/16949
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: South Asian
  type: Population
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  allele frequency: 0.0e0
  allele num: 8321
  num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
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X-54143268-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24054143268
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24054143268
    reference: chr 0
allele count: 1
allele frequency: 1.200408138767181e-5
allele num: 83305
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000184083
  ensembl protein: ENSP00000364324
  ensembl transcript: ENST00000375180
  gene symbol: FAM120C
  hgvsc: ENST00000375180.2:c.2063-41G>T
  variant of: http://identifiers.org/hgnc/16949
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184083
  ensembl protein: ENSP00000329896
  ensembl transcript: ENST00000328235
  gene symbol: FAM120C
  hgvsc: ENST00000328235.4:c.2063-41G>T
  variant of: http://identifiers.org/hgnc/16949
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: Other
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  allele count: 0
  allele frequency: 0.0e0
  allele num: 602
  num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Latino
reference allele: C
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
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X-54159093-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24054159093
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24054159093
    reference: chr 0
allele count: 31
allele frequency: 6.741035510035444e-4
allele num: 45987
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184083
  ensembl protein: ENSP00000329896
  ensembl transcript: ENST00000328235
  gene symbol: FAM120C
  hgvsc: ENST00000328235.4:c.2062+32C>T
  variant of: http://identifiers.org/hgnc/16949
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000184083
  ensembl protein: ENSP00000364324
  ensembl transcript: ENST00000375180
  gene symbol: FAM120C
  hgvsc: ENST00000375180.2:c.2062+32C>T
  variant of: http://identifiers.org/hgnc/16949
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
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  variant carriers: 1
genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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  allele num: 5824
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population: East Asian
population: South Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: QD

X-54159100-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24054159100
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24054159100
    reference: chr 0
allele count: 0
allele frequency: 0.0e0
allele num: 47085
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000184083
  ensembl protein: ENSP00000329896
  ensembl transcript: ENST00000328235
  gene symbol: FAM120C
  hgvsc: ENST00000328235.4:c.2062+25A>G
  variant of: http://identifiers.org/hgnc/16949
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000184083
  ensembl protein: ENSP00000364324
  ensembl transcript: ENST00000375180
  gene symbol: FAM120C
  hgvsc: ENST00000375180.2:c.2062+25A>G
  variant of: http://identifiers.org/hgnc/16949
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 264
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  variant carriers: 0
genotype depth: GenotypeDepth
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num of homozygotes: 0
population: South Asian
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  allele num: 2918
  num of homozygotes: 0
population: Other
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: T
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum

X-54159139-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24054159139
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24054159139
    reference: chr 0
allele count: 5
allele frequency: 8.563403439062822e-5
allele num: 58388
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000184083
  ensembl protein: ENSP00000364324
  ensembl transcript: ENST00000375180
  gene symbol: FAM120C
  hgvsc: ENST00000375180.2:c.2048G>A
  hgvsp: ENSP00000364324.2:p.Arg683Gln
  variant of: http://identifiers.org/hgnc/16949
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184083
  ensembl protein: ENSP00000329896
  ensembl transcript: ENST00000328235
  gene symbol: FAM120C
  hgvsc: ENST00000328235.4:c.2048G>A
  hgvsp: ENSP00000329896.4:p.Arg683Gln
  variant of: http://identifiers.org/hgnc/16949
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 379
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genotype depth: GenotypeDepth
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population: South Asian
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population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: African
population: East Asian
population: Latino
reference allele: C
site quality: FS
site quality: InbreedingCoeff
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site quality: QD
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X-54159143-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24054159143
    reference: chr 0
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    type: ExactPosition
    position: 24054159143
    reference: chr 0
allele count: 3
allele frequency: 4.958349861166204e-5
allele num: 60504
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
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  gene symbol: FAM120C
  hgvsc: ENST00000328235.4:c.2044C>T
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  variant of: http://identifiers.org/hgnc/16949
annotation: Annotation
  canonical: true
  consequence: missense_variant
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  ensembl protein: ENSP00000364324
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  gene symbol: FAM120C
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  variant of: http://identifiers.org/hgnc/16949
canonical: true
consequence: missense
filter: PASS
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population: African
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population: Latino
population: South Asian
population: Other
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population: East Asian
population: European (Non-Finnish)
reference allele: G
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site quality: MQRankSum
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X-54159145-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24054159145
    reference: chr 0
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    type: ExactPosition
    position: 24054159145
    reference: chr 0
allele count: 3
allele frequency: 4.890055257624411e-5
allele num: 61349
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
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  ensembl protein: ENSP00000364324
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  gene symbol: FAM120C
  hgvsc: ENST00000375180.2:c.2042G>A
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  variant of: http://identifiers.org/hgnc/16949
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184083
  ensembl protein: ENSP00000329896
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  gene symbol: FAM120C
  hgvsc: ENST00000328235.4:c.2042G>A
  hgvsp: ENSP00000329896.4:p.Arg681Gln
  variant of: http://identifiers.org/hgnc/16949
canonical: true
consequence: missense
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population: Other
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population: East Asian
population: African
population: European (Non-Finnish)
reference allele: C
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site quality: FS
site quality: MQRankSum
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X-54159149-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24054159149
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24054159149
    reference: chr 0
allele count: 1
allele frequency: 1.582303517460719e-5
allele num: 63199
alternate allele: C
annotation: Annotation
  canonical: false
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  ensembl gene: ENSG00000184083
  ensembl protein: ENSP00000329896
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  gene symbol: FAM120C
  hgvsc: ENST00000328235.4:c.2038A>G
  hgvsp: ENSP00000329896.4:p.Met680Val
  variant of: http://identifiers.org/hgnc/16949
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000184083
  ensembl protein: ENSP00000364324
  ensembl transcript: ENST00000375180
  gene symbol: FAM120C
  hgvsc: ENST00000375180.2:c.2038A>G
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  variant of: http://identifiers.org/hgnc/16949
canonical: true
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population: European (Non-Finnish)
population: African
population: South Asian
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population: Other
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X-54159169-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
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    reference: chr 0
  end: Position
    type: ExactPosition
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allele count: 1
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allele num: 67640
alternate allele: T
annotation: Annotation
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  ensembl protein: ENSP00000364324
  ensembl transcript: ENST00000375180
  gene symbol: FAM120C
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  hgvsp: ENSP00000364324.2:p.Arg673Lys
  variant of: http://identifiers.org/hgnc/16949
annotation: Annotation
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  consequence: missense_variant
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  ensembl protein: ENSP00000329896
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  variant of: http://identifiers.org/hgnc/16949
canonical: true
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Arg673Lys
num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 3168
  num of homozygotes: 0
population: South Asian
population: African
population: European (Non-Finnish)
population: East Asian
population: Other
population: Latino
reference allele: C
site quality: BaseQRankSum
site quality: QD
site quality: MQ
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site quality: DP
site quality: VQSLOD
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X-54159171-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24054159171
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24054159171
    reference: chr 0
allele count: 3
allele frequency: 4.416766043902655e-5
allele num: 67923
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000184083
  ensembl protein: ENSP00000329896
  ensembl transcript: ENST00000328235
  gene symbol: FAM120C
  hgvsc: ENST00000328235.4:c.2016G>A
  hgvsp: ENST00000328235.4:c.2016G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16949
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000184083
  ensembl protein: ENSP00000364324
  ensembl transcript: ENST00000375180
  gene symbol: FAM120C
  hgvsc: ENST00000375180.2:c.2016G>A
  hgvsp: ENST00000375180.2:c.2016G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16949
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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hgvs: p.Gln672Gln
num of homozygotes: 0
population: Latino
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  allele num: 7372
  num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: African
population: South Asian
population: Other
population: European (Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: BaseQRankSum
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site quality: DP
site quality: VQSLOD
site quality: FS
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X-54159183-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24054159183
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24054159183
    reference: chr 0
allele count: 1
allele frequency: 1.432521093873107e-5
allele num: 69807
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
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  ensembl protein: ENSP00000329896
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  gene symbol: FAM120C
  hgvsc: ENST00000328235.4:c.2004G>A
  hgvsp: ENST00000328235.4:c.2004G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16949
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000184083
  ensembl protein: ENSP00000364324
  ensembl transcript: ENST00000375180
  gene symbol: FAM120C
  hgvsc: ENST00000375180.2:c.2004G>A
  hgvsp: ENST00000375180.2:c.2004G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16949
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
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hgvs: p.Leu668Leu
num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
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  allele num: 38052
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population: East Asian
population: European (Finnish)
population: Other
population: South Asian
population: Latino
population: African
reference allele: C
site quality: InbreedingCoeff
site quality: ReadPosRankSum
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X-54159197-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24054159197
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24054159197
    reference: chr 0
allele count: 1
allele frequency: 1.395420230802506e-5
allele num: 71663
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000184083
  ensembl protein: ENSP00000364324
  ensembl transcript: ENST00000375180
  gene symbol: FAM120C
  hgvsc: ENST00000375180.2:c.1990G>A
  hgvsp: ENSP00000364324.2:p.Val664Ile
  variant of: http://identifiers.org/hgnc/16949
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184083
  ensembl protein: ENSP00000329896
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  gene symbol: FAM120C
  hgvsc: ENST00000328235.4:c.1990G>A
  hgvsp: ENSP00000329896.4:p.Val664Ile
  variant of: http://identifiers.org/hgnc/16949
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
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population: Other
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population: Latino
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population: European (Non-Finnish)
reference allele: C
site quality: FS
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site quality: MQRankSum
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X-54159204-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24054159204
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24054159204
    reference: chr 0
allele count: 60
allele frequency: 8.253321962089741e-4
allele num: 72698
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000184083
  ensembl protein: ENSP00000364324
  ensembl transcript: ENST00000375180
  gene symbol: FAM120C
  hgvsc: ENST00000375180.2:c.1983A>G
  hgvsp: ENST00000375180.2:c.1983A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/16949
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000184083
  ensembl protein: ENSP00000329896
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  gene symbol: FAM120C
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  variant of: http://identifiers.org/hgnc/16949
canonical: true
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1758
  bin: 9.75e1
  variant carriers: 41
hgvs: p.Val661Val
num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 7593
  num of homozygotes: 0
population: South Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
reference allele: T
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff

X-54159206-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24054159206
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24054159206
    reference: chr 0
allele count: 1
allele frequency: 1.37211855104281e-5
allele num: 72880
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000184083
  ensembl protein: ENSP00000364324
  ensembl transcript: ENST00000375180
  gene symbol: FAM120C
  hgvsc: ENST00000375180.2:c.1981G>A
  hgvsp: ENSP00000364324.2:p.Val661Ile
  variant of: http://identifiers.org/hgnc/16949
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184083
  ensembl protein: ENSP00000329896
  ensembl transcript: ENST00000328235
  gene symbol: FAM120C
  hgvsc: ENST00000328235.4:c.1981G>A
  hgvsp: ENSP00000329896.4:p.Val661Ile
  variant of: http://identifiers.org/hgnc/16949
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
hgvs: p.Val661Ile
num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 7602
  num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Other
population: Latino
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: QD

X-54159210-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24054159210
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24054159210
    reference: chr 0
allele count: 25
allele frequency: 3.406644319079933e-4
allele num: 73386
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000184083
  ensembl protein: ENSP00000364324
  ensembl transcript: ENST00000375180
  gene symbol: FAM120C
  hgvsc: ENST00000375180.2:c.1977A>G
  hgvsp: ENST00000375180.2:c.1977A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/16949
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000184083
  ensembl protein: ENSP00000329896
  ensembl transcript: ENST00000328235
  gene symbol: FAM120C
  hgvsc: ENST00000328235.4:c.1977A>G
  hgvsp: ENST00000328235.4:c.1977A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/16949
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
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  bin: 2.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Gln659Gln
num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 7634
  num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Finnish)
population: Other
population: Latino
population: European (Non-Finnish)
reference allele: T
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP

X-54159253-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24054159253
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24054159253
    reference: chr 0
allele count: 1
allele frequency: 1.309980743283074e-5
allele num: 76337
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184083
  ensembl protein: ENSP00000329896
  ensembl transcript: ENST00000328235
  gene symbol: FAM120C
  hgvsc: ENST00000328235.4:c.1934T>C
  hgvsp: ENSP00000329896.4:p.Met645Thr
  variant of: http://identifiers.org/hgnc/16949
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000184083
  ensembl protein: ENSP00000364324
  ensembl transcript: ENST00000375180
  gene symbol: FAM120C
  hgvsc: ENST00000375180.2:c.1934T>C
  hgvsp: ENSP00000364324.2:p.Met645Thr
  variant of: http://identifiers.org/hgnc/16949
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1874
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Met645Thr
num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 6185
  num of homozygotes: 0
population: Latino
population: Other
population: European (Non-Finnish)
population: South Asian
population: African
population: European (Finnish)
reference allele: A
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: MQ
site quality: InbreedingCoeff

X-54159254-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24054159254
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24054159254
    reference: chr 0
allele count: 0
allele frequency: 0.0e0
allele num: 76294
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184083
  ensembl protein: ENSP00000329896
  ensembl transcript: ENST00000328235
  gene symbol: FAM120C
  hgvsc: ENST00000328235.4:c.1933A>G
  hgvsp: ENSP00000329896.4:p.Met645Val
  variant of: http://identifiers.org/hgnc/16949
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000184083
  ensembl protein: ENSP00000364324
  ensembl transcript: ENST00000375180
  gene symbol: FAM120C
  hgvsc: ENST00000375180.2:c.1933A>G
  hgvsp: ENSP00000364324.2:p.Met645Val
  variant of: http://identifiers.org/hgnc/16949
canonical: true
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Met645Val
num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 8416
  num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: African
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD

X-54159259-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24054159259
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24054159259
    reference: chr 0
allele count: 1
allele frequency: 1.316049220240837e-5
allele num: 75985
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184083
  ensembl protein: ENSP00000329896
  ensembl transcript: ENST00000328235
  gene symbol: FAM120C
  hgvsc: ENST00000328235.4:c.1928G>T
  hgvsp: ENSP00000329896.4:p.Cys643Phe
  variant of: http://identifiers.org/hgnc/16949
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000184083
  ensembl protein: ENSP00000364324
  ensembl transcript: ENST00000375180
  gene symbol: FAM120C
  hgvsc: ENST00000375180.2:c.1928G>T
  hgvsp: ENSP00000364324.2:p.Cys643Phe
  variant of: http://identifiers.org/hgnc/16949
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
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  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Cys643Phe
num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 6187
  num of homozygotes: 0
population: European (Finnish)
population: Other
population: Latino
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: QD

X-54159261-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24054159261
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24054159261
    reference: chr 0
allele count: 1
allele frequency: 1.314094982785356e-5
allele num: 76098
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000184083
  ensembl protein: ENSP00000329896
  ensembl transcript: ENST00000328235
  gene symbol: FAM120C
  hgvsc: ENST00000328235.4:c.1926G>A
  hgvsp: ENST00000328235.4:c.1926G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16949
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000184083
  ensembl protein: ENSP00000364324
  ensembl transcript: ENST00000375180
  gene symbol: FAM120C
  hgvsc: ENST00000375180.2:c.1926G>A
  hgvsp: ENST00000375180.2:c.1926G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/16949
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
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  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
hgvs: p.Glu642Glu
num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 8405
  num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: African
population: South Asian
population: European (Finnish)
population: Other
reference allele: C
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ

X-54159264-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24054159264
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24054159264
    reference: chr 0
allele count: 1
allele frequency: 1.316153147580252e-5
allele num: 75979
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000184083
  ensembl protein: ENSP00000364324
  ensembl transcript: ENST00000375180
  gene symbol: FAM120C
  hgvsc: ENST00000375180.2:c.1923T>C
  hgvsp: ENST00000375180.2:c.1923T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/16949
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000184083
  ensembl protein: ENSP00000329896
  ensembl transcript: ENST00000328235
  gene symbol: FAM120C
  hgvsc: ENST00000328235.4:c.1923T>C
  hgvsp: ENST00000328235.4:c.1923T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/16949
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Asp641Asp
num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 6200
  num of homozygotes: 0
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Latino
population: South Asian
population: Other
reference allele: A
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: DP

X-54159275-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24054159275
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24054159275
    reference: chr 0
allele count: 1
allele frequency: 1.338956952533976e-5
allele num: 74685
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184083
  ensembl protein: ENSP00000329896
  ensembl transcript: ENST00000328235
  gene symbol: FAM120C
  hgvsc: ENST00000328235.4:c.1912T>A
  hgvsp: ENSP00000329896.4:p.Cys638Ser
  variant of: http://identifiers.org/hgnc/16949
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000184083
  ensembl protein: ENSP00000364324
  ensembl transcript: ENST00000375180
  gene symbol: FAM120C
  hgvsc: ENST00000375180.2:c.1912T>A
  hgvsp: ENSP00000364324.2:p.Cys638Ser
  variant of: http://identifiers.org/hgnc/16949
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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hgvs: p.Cys638Ser
num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 6529
  num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: A
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: QD

X-54159278-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24054159278
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24054159278
    reference: chr 0
allele count: 1
allele frequency: 1.350183624972996e-5
allele num: 74064
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000184083
  ensembl protein: ENSP00000364324
  ensembl transcript: ENST00000375180
  gene symbol: FAM120C
  hgvsc: ENST00000375180.2:c.1909G>A
  hgvsp: ENSP00000364324.2:p.Val637Ile
  variant of: http://identifiers.org/hgnc/16949
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000184083
  ensembl protein: ENSP00000329896
  ensembl transcript: ENST00000328235
  gene symbol: FAM120C
  hgvsc: ENST00000328235.4:c.1909G>A
  hgvsp: ENSP00000329896.4:p.Val637Ile
  variant of: http://identifiers.org/hgnc/16949
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9835
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.25e1
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genotype depth: GenotypeDepth
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  bin: 7.5e0
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 3.75e1
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genotype depth: GenotypeDepth
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  bin: 7.75e1
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genotype depth: GenotypeDepth
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  bin: 8.75e1
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genotype depth: GenotypeDepth
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  bin: 7.25e1
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genotype depth: GenotypeDepth
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  bin: 6.25e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 5.75e1
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genotype depth: GenotypeDepth
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  bin: 9.75e1
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genotype depth: GenotypeDepth
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  bin: 8.25e1
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genotype depth: GenotypeDepth
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  bin: 4.75e1
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genotype depth: GenotypeDepth
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  bin: 1.25e1
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genotype depth: GenotypeDepth
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  bin: 5.25e1
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genotype depth: GenotypeDepth
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  bin: 6.75e1
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genotype depth: GenotypeDepth
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  bin: 9.25e1
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genotype depth: GenotypeDepth
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  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.5e0
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genotype quality: GenotypeQuality
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  bin: 4.75e1
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genotype quality: GenotypeQuality
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  bin: 9.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 7.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 6.25e1
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genotype quality: GenotypeQuality
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  bin: 5.25e1
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genotype quality: GenotypeQuality
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  bin: 7.25e1
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genotype quality: GenotypeQuality
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  bin: 3.25e1
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genotype quality: GenotypeQuality
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  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 436
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 285
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 215
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Val637Ile
num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 7715
  num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: C
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum

X-54159279-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24054159279
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24054159279
    reference: chr 0
allele count: 1
allele frequency: 1.351789769655023e-5
allele num: 73976
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000184083
  ensembl protein: ENSP00000329896
  ensembl transcript: ENST00000328235
  gene symbol: FAM120C
  hgvsc: ENST00000328235.4:c.1908C>T
  hgvsp: ENST00000328235.4:c.1908C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16949
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000184083
  ensembl protein: ENSP00000364324
  ensembl transcript: ENST00000375180
  gene symbol: FAM120C
  hgvsc: ENST00000375180.2:c.1908C>T
  hgvsp: ENST00000375180.2:c.1908C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/16949
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 24259
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 703
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12190
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9813
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1937
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 623
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1613
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 675
  bin: 3.75e1
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genotype quality: GenotypeQuality
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  bin: 4.75e1
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genotype quality: GenotypeQuality
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  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 3.25e1
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genotype quality: GenotypeQuality
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  bin: 7.25e1
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genotype quality: GenotypeQuality
  all individuals: 31200
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 5.75e1
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genotype quality: GenotypeQuality
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  bin: 4.25e1
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genotype quality: GenotypeQuality
  all individuals: 768
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1511
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Pro636Pro
num of homozygotes: 0
reference allele: G

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4390
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8211
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9436
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9092
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 4.289728245715634e-5
allele num: 46623
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 603
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

FS
type: SiteQuality
SIO_000300: 3.657e0

DP
type: SiteQuality
SIO_000300: 1.398231e6

VQSLOD
type: SiteQuality
SIO_000300: 1.96e0

MQRankSum
type: SiteQuality
SIO_000300: 4.31e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.03e0

QD
type: SiteQuality
SIO_000300: 1.225e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.45e-1

MQ
type: SiteQuality
SIO_000300: 5.96e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.419999999999999e-1

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47180
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4459
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.03831377842384e-4
allele num: 9631
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8285
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 611
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.418916e6

ClippingRankSum
type: SiteQuality
SIO_000300: -4.41e-1

FS
type: SiteQuality
SIO_000300: 3.029e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.69e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.253e0

VQSLOD
type: SiteQuality
SIO_000300: 6.929999999999999e-1

MQRankSum
type: SiteQuality
SIO_000300: -8.169999999999999e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

QD
type: SiteQuality
SIO_000300: 1.165e1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9696
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4481
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8321
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.112869488051723e-5
allele num: 47329
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9186
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.425568e6

VQSLOD
type: SiteQuality
SIO_000300: 4.44e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.98e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 3.019e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4472
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9182
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6609
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47256
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8299
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.1e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.111e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.101e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 5.76e-1

VQSLOD
type: SiteQuality
SIO_000300: -8.007e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.1e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 2.312e1

DP
type: SiteQuality
SIO_000300: 1.421244e6

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9603
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9172
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8284
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.123142250530786e-5
allele num: 47100
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4453
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.867e1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.57e-1

QD
type: SiteQuality
SIO_000300: 1.341e1

DP
type: SiteQuality
SIO_000300: 1.413414e6

VQSLOD
type: SiteQuality
SIO_000300: -1.434e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 1.31e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.35e-1

FS
type: SiteQuality
SIO_000300: 3.973e0

MQRankSum
type: SiteQuality
SIO_000300: 2.19e0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8926
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9189
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8094
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 45538
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 583
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 3.08546744831842e-4
allele num: 6482
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.339673e6

MQ
type: SiteQuality
SIO_000300: 5.878e1

VQSLOD
type: SiteQuality
SIO_000300: -1.325e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.7e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -3.812e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.05e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.99e-1

FS
type: SiteQuality
SIO_000300: 8.638999999999999e0

QD
type: SiteQuality
SIO_000300: 1.378e1

MQRankSum
type: SiteQuality
SIO_000300: 7.54e-1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4225
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 45459
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6473
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8914
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9172
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 583
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.338034e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.16e0

VQSLOD
type: SiteQuality
SIO_000300: -1.855e0

MQ
type: SiteQuality
SIO_000300: 5.682e1

QD
type: SiteQuality
SIO_000300: 1.696e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.159e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.738e0

MQRankSum
type: SiteQuality
SIO_000300: 1.45e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.3e-3

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6447
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 580
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9097
num of homozygotes: 0

Latino
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allele count: 1
allele frequency: 1.12726862811408e-4
allele num: 8871
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4201
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 45208
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.331643e6

QD
type: SiteQuality
SIO_000300: 3.043e1

FS
type: SiteQuality
SIO_000300: 1.0601e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.39e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.2e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -2.216e0

MQRankSum
type: SiteQuality
SIO_000300: 6.04e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.93e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8675
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 8553
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4010
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6295
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 2.307443813743135e-5
allele num: 43338
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 561
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.39e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.2e-3

MQRankSum
type: SiteQuality
SIO_000300: 8.49e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.46e-1

QD
type: SiteQuality
SIO_000300: 8.52e0

FS
type: SiteQuality
SIO_000300: 1.77e0

VQSLOD
type: SiteQuality
SIO_000300: -1.223e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.263197e6

ClippingRankSum
type: SiteQuality
SIO_000300: -9.66e-1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 423
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 33361
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 6550
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 6405
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 1.593879502709595e-4
allele num: 6274
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3073
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.95e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 8.76578e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.399999999999999e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 2.799e1

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 3310
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 3289
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1905
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3504
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 5.059704513256426e-5
allele num: 19764
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 280
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.23e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 5.34374e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 8.88e-1

QD
type: SiteQuality
SIO_000300: 3.109e1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3175
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3300
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4173
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 264
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3121
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1837
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 6.96e0

VQSLOD
type: SiteQuality
SIO_000300: -1.231e0

DP
type: SiteQuality
SIO_000300: 5.28979e5

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.53e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.23e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.752e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.18e-1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7282
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 36083
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3628
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5077
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 482
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7299
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.8e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.405e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.17e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.04e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.257862e6

QD
type: SiteQuality
SIO_000300: 5.1e0

MQRankSum
type: SiteQuality
SIO_000300: 7.87e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.17e-1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 493
num of homozygotes: 0

African
type: Population
allele count: 10
allele frequency: 1.361655773420479e-3
allele num: 7344
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7451
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5174
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 36714
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6725
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.957e1

DP
type: SiteQuality
SIO_000300: 1.323072e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.92e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.86e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.5e-3

FS
type: SiteQuality
SIO_000300: 1.668e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -1.06e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.73e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.9e-1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 493
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 1.352887060988149e-4
allele num: 36958
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3712
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7504
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7369
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6771
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.041e0

DP
type: SiteQuality
SIO_000300: 1.351066e6

QD
type: SiteQuality
SIO_000300: 1.814e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.51e-2

MQRankSum
type: SiteQuality
SIO_000300: -3.65e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 8.799999999999999e-2

VQSLOD
type: SiteQuality
SIO_000300: 4.95e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.76e-1

MQ
type: SiteQuality
SIO_000300: 6.034e1

East Asian
type: Population
allele count: 6613
allele frequency: 1.0e0
allele num: 6613
num of homozygotes: 2311

African
type: Population
allele count: 8329
allele frequency: 9.859138257575758e-1
allele num: 8448
num of homozygotes: 3207

Other
type: Population
allele count: 624
allele frequency: 1.0e0
allele num: 624
num of homozygotes: 178

Latino
type: Population
allele count: 9243
allele frequency: 9.990272373540856e-1
allele num: 9252
num of homozygotes: 3521

European (Finnish)
type: Population
allele count: 4506
allele frequency: 1.0e0
allele num: 4506
num of homozygotes: 1222

European (Non-Finnish)
type: Population
allele count: 47670
allele frequency: 9.999370712982191e-1
allele num: 47673
num of homozygotes: 14621

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 3.25e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.078e-1

QD
type: SiteQuality
SIO_000300: 3.184e1

VQSLOD
type: SiteQuality
SIO_000300: 1.424e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.66e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.57e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.34e-1

DP
type: SiteQuality
SIO_000300: 2.556451e6

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9726
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8428
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.106283042315226e-5
allele num: 47477
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4493
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 622
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
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MQRankSum
type: SiteQuality
SIO_000300: 2.68e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.902e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.45e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.61e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.61e-1

QD
type: SiteQuality
SIO_000300: 3.361e1

DP
type: SiteQuality
SIO_000300: 1.562659e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.092e0

VQSLOD
type: SiteQuality
SIO_000300: -3.889e-1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 621
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4494
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9230
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.105573452929906e-5
allele num: 47493
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8432
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.435e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.06e-2

MQRankSum
type: SiteQuality
SIO_000300: 8.76e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.118e0

DP
type: SiteQuality
SIO_000300: 1.586294e6

ClippingRankSum
type: SiteQuality
SIO_000300: 4.7e-2

QD
type: SiteQuality
SIO_000300: 1.591e1

VQSLOD
type: SiteQuality
SIO_000300: -1.671e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.69e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4497
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47545
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.510574018126888e-4
allele num: 6620
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8440
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9230
num of homozygotes: 0

South Asian
type: Population
allele count: 0
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allele num: 9739
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.909e0

DP
type: SiteQuality
SIO_000300: 1.602471e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.132e0

QD
type: SiteQuality
SIO_000300: 7.48e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -1.56e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.23e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.15e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.99e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9701
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47447
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6615
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 616
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9225
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4489
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.617531e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 7.76e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.86e0

MQ
type: SiteQuality
SIO_000300: 5.953e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.049e0

FS
type: SiteQuality
SIO_000300: 2.257e0

MQRankSum
type: SiteQuality
SIO_000300: 1.13e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.86e-1

QD
type: SiteQuality
SIO_000300: 1.426e1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8390
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4462
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6591
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 610
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9188
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.120845793302369e-5
allele num: 47151
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.631e0

QD
type: SiteQuality
SIO_000300: 2.477e1

MQRankSum
type: SiteQuality
SIO_000300: -3.25e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.93e0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.76e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 2.31e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.48e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.69e0

DP
type: SiteQuality
SIO_000300: 1.606966e6

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4456
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 609
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9591
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6591
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9180
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.122511355435752e-5
allele num: 47114
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.0e-3

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 9.1e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.517e0

VQSLOD
type: SiteQuality
SIO_000300: 1.1e-2

FS
type: SiteQuality
SIO_000300: 1.681e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.179e0

QD
type: SiteQuality
SIO_000300: 8.460000000000001e0

DP
type: SiteQuality
SIO_000300: 1.605269e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4379
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9348
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9081
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 603
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6538
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.154708037060978e-5
allele num: 46410
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.89e0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -6.044e-1

DP
type: SiteQuality
SIO_000300: 1.570042e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.273e0

MQRankSum
type: SiteQuality
SIO_000300: 5.79e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.74e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 7.33e-1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4191
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 44618
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6349
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.225340031858841e-4
allele num: 8161
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 576
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8827
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -3.455e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.466995e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.9e-3

QD
type: SiteQuality
SIO_000300: 3.146e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3926
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8140
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5895
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.418555155150313e-5
allele num: 41347
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 537
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7812
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.917e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.93e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.5e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.98e-1

VQSLOD
type: SiteQuality
SIO_000300: -8.26e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.27e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.344e0

DP
type: SiteQuality
SIO_000300: 1.233044e6

QD
type: SiteQuality
SIO_000300: 1.648e1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3907
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8103
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5866
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 41145
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 535
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7942
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 8.22e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.282e0

VQSLOD
type: SiteQuality
SIO_000300: 3.1e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.8e-3

DP
type: SiteQuality
SIO_000300: 1.21849e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.21e0

QD
type: SiteQuality
SIO_000300: 1.486e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.369e0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 527
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7834
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 39776
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7637
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5699
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7630
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.621e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.9e-3

DP
type: SiteQuality
SIO_000300: 1.112084e6

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.34e-1

QD
type: SiteQuality
SIO_000300: 2.591e1

MQRankSum
type: SiteQuality
SIO_000300: 2.17e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.51e-1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 477
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6477
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7112
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4942
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3457
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 34652
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.07e-2

QD
type: SiteQuality
SIO_000300: 3.03e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 9.12538e5

VQSLOD
type: SiteQuality
SIO_000300: -1.764e-1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 469
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3337
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.536098310291859e-4
allele num: 6510
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6916
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 33208
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4692
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.75e-1

QD
type: SiteQuality
SIO_000300: 1.965e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.01e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.11e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -1.323e0

MQRankSum
type: SiteQuality
SIO_000300: 5.89e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 8.99561e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.52e0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3606
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7418
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 463
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.653294064581177e-5
allele num: 37689
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5418
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5450
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ClippingRankSum
type: SiteQuality
SIO_000300: 1.13e0

VQSLOD
type: SiteQuality
SIO_000300: -2.527e0

DP
type: SiteQuality
SIO_000300: 9.66484e5

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.008e0

MQRankSum
type: SiteQuality
SIO_000300: -2.194e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.1e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 4.29e0

QD
type: SiteQuality
SIO_000300: 1.635e1

FS
type: SiteQuality
SIO_000300: 2.222e0

MQ
type: SiteQuality
SIO_000300: 5.803e1

East Asian
type: Population
allele count: 5
allele frequency: 9.230201218386561e-4
allele num: 5417
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3610
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 37811
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7388
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7436
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5477
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BaseQRankSum
type: SiteQuality
SIO_000300: 1.66e0

VQSLOD
type: SiteQuality
SIO_000300: 7.75e-1

FS
type: SiteQuality
SIO_000300: 5.11e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.1e-3

QD
type: SiteQuality
SIO_000300: 1.534e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.78e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.9e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 9.68399e5

ClippingRankSum
type: SiteQuality
SIO_000300: -3.9e-2

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5451
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 467
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.61376408165399e-5
allele num: 38259
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7539
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7447
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3650
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 7.47e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.1e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.47e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.103e0

DP
type: SiteQuality
SIO_000300: 9.85993e5

FS
type: SiteQuality
SIO_000300: 8.653e0

BaseQRankSum
type: SiteQuality
SIO_000300: 7.47e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.63e0

QD
type: SiteQuality
SIO_000300: 1.807e1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3645
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 468
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5455
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.781578478531979e-4
allele num: 5613
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7542
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 38216
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.8e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 2.27e0

VQSLOD
type: SiteQuality
SIO_000300: 1.45e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.23e-1

DP
type: SiteQuality
SIO_000300: 9.94743e5

MQRankSum
type: SiteQuality
SIO_000300: 1.42e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -8.49e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.21e0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7503
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7643
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 38648
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 474
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5499
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South Asian
type: Population
allele count: 1
allele frequency: 1.738223535546671e-4
allele num: 5753
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MQRankSum
type: SiteQuality
SIO_000300: 3.96e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.267e0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -8.72e-1

DP
type: SiteQuality
SIO_000300: 1.044327e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.4e-3

MQ
type: SiteQuality
SIO_000300: 5.684e1

QD
type: SiteQuality
SIO_000300: 1.708e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.66e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.585e0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6227
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4084
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8024
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European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.301178203240059e-5
allele num: 43456
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7507
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 550
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MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 3.235e1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.5e-3

VQSLOD
type: SiteQuality
SIO_000300: 7.3e-1

DP
type: SiteQuality
SIO_000300: 1.29677e6

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4306
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.539882968894364e-4
allele num: 6494
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8871
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European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 45975
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
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allele num: 592
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MQRankSum
type: SiteQuality
SIO_000300: 2.31e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.62e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.41e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.23e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -1.519e0

VQSLOD
type: SiteQuality
SIO_000300: 1.26e0

QD
type: SiteQuality
SIO_000300: 1.299e1

DP
type: SiteQuality
SIO_000300: 1.406061e6

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.911e1

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 46653
num of homozygotes: 0

East Asian
type: Population
allele count: 0
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 602
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South Asian
type: Population
allele count: 2
allele frequency: 2.156566745740781e-4
allele num: 9274
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African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8311
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4373
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DP
type: SiteQuality
SIO_000300: 1.440484e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.91e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.504e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.48e-1

FS
type: SiteQuality
SIO_000300: 5.763e0

QD
type: SiteQuality
SIO_000300: 1.141e1

VQSLOD
type: SiteQuality
SIO_000300: 3.85e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.1e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.5e0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 614
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South Asian
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allele count: 0
allele frequency: 0.0e0
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East Asian
type: Population
allele count: 1
allele frequency: 1.514692517418964e-4
allele num: 6602
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European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47342
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 8409
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4447
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MQRankSum
type: SiteQuality
SIO_000300: -9.46e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.6e-2

BaseQRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 3.917e0

MQ
type: SiteQuality
SIO_000300: 5.747e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.39e-1

DP
type: SiteQuality
SIO_000300: 1.48413e6

VQSLOD
type: SiteQuality
SIO_000300: -1.086e0

QD
type: SiteQuality
SIO_000300: 1.961e1

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47513
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 618
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African
type: Population
allele count: 4
allele frequency: 4.740459824602986e-4
allele num: 8438
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9723
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VQSLOD
type: SiteQuality
SIO_000300: 1.05e0

QD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: 1.6e0

DP
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 1.21e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.900000000000001e-2

MQRankSum
type: SiteQuality
SIO_000300: 5.4e-2

FS
type: SiteQuality
SIO_000300: 3.395e0

MQ
type: SiteQuality
SIO_000300: 5.662e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.2e-1

East Asian
type: Population
allele count: 4
allele frequency: 6.044122091266244e-4
allele num: 6618
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47695
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4491
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Other
type: Population
allele count: 0
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allele num: 621
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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South Asian
type: Population
allele count: 0
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allele num: 9833
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ClippingRankSum
type: SiteQuality
SIO_000300: -2.6e-1

DP
type: SiteQuality
SIO_000300: 1.507258e6

VQSLOD
type: SiteQuality
SIO_000300: -1.738e-1

FS
type: SiteQuality
SIO_000300: 7.872e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.9e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.72e-2

MQRankSum
type: SiteQuality
SIO_000300: -2.81e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.21e-1

MQ
type: SiteQuality
SIO_000300: 5.935e1

QD
type: SiteQuality
SIO_000300: 1.653e1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4515
num of homozygotes: 0

Latino
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allele count: 0
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num of homozygotes: 0

East Asian
type: Population
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African
type: Population
allele count: 1
allele frequency: 1.175502527330434e-4
allele num: 8507
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Other
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allele count: 0
allele frequency: 0.0e0
allele num: 630
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European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47920
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BaseQRankSum
type: SiteQuality
SIO_000300: -4.0e-2

VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.149999999999999e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 3.437e1

MQRankSum
type: SiteQuality
SIO_000300: 7.66e-1

DP
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ClippingRankSum
type: SiteQuality
SIO_000300: -9.27e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.27e-1

South Asian
type: Population
allele count: 0
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allele num: 10042
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European (Finnish)
type: Population
allele count: 1
allele frequency: 2.212878955521133e-4
allele num: 4519
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47944
num of homozygotes: 0

East Asian
type: Population
allele count: 0
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African
type: Population
allele count: 0
allele frequency: 0.0e0
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 1.69e0

QD
type: SiteQuality
SIO_000300: 3.366e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.42e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 2.14e0

DP
type: SiteQuality
SIO_000300: 1.531493e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.316e0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -5.453e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.001e0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4529
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9313
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.084418968212611e-5
allele num: 47975
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 632
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10091
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.12e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.069e0

FS
type: SiteQuality
SIO_000300: 1.647e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.3e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.030000000000001e-2

MQRankSum
type: SiteQuality
SIO_000300: 1.2e0

DP
type: SiteQuality
SIO_000300: 1.536995e6

BaseQRankSum
type: SiteQuality
SIO_000300: 2.42e-1

QD
type: SiteQuality
SIO_000300: 1.983e1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6635
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10093
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 632
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47979
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4529
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 8.26e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.194e-1

VQSLOD
type: SiteQuality
SIO_000300: -5.368000000000001e-1

MQRankSum
type: SiteQuality
SIO_000300: -7.85e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.78e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.48e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.53747e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.2e-1

QD
type: SiteQuality
SIO_000300: 1.983e1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 632
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8512
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10093
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9314
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4529
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6635
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.983e1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.78e-1

FS
type: SiteQuality
SIO_000300: 8.26e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.2e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -7.85e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.194e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.48e-1

DP
type: SiteQuality
SIO_000300: 1.53747e6

VQSLOD
type: SiteQuality
SIO_000300: -5.368000000000001e-1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4529
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 632
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.084245190604223e-5
allele num: 47979
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6636
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10095
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DP
type: SiteQuality
SIO_000300: 1.537521e6

QD
type: SiteQuality
SIO_000300: 3.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.36e-2

VQSLOD
type: SiteQuality
SIO_000300: 2.22e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 632
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6636
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8513
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10103
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.084288632289799e-5
allele num: 47978
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9314
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.151e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.58e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.93e0

MQRankSum
type: SiteQuality
SIO_000300: -1.364e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.95e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.07e0

MQ
type: SiteQuality
SIO_000300: 5.96e1

QD
type: SiteQuality
SIO_000300: 3.1e1

DP
type: SiteQuality
SIO_000300: 1.538541e6

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 632
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4529
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10111
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47979
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.073537305421363e-4
allele num: 9315
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6637
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -2.69e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.53e0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.0e-2

VQSLOD
type: SiteQuality
SIO_000300: -2.926e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.17e0

DP
type: SiteQuality
SIO_000300: 1.539108e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.25e1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 632
num of homozygotes: 0

South Asian
type: Population
allele count: 7
allele frequency: 6.92246835443038e-4
allele num: 10112
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6637
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47979
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9316
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8515
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.539634e6

MQRankSum
type: SiteQuality
SIO_000300: 1.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.65e-1

MQ
type: SiteQuality
SIO_000300: 5.963e1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.95e-1

QD
type: SiteQuality
SIO_000300: 2.607e1

FS
type: SiteQuality
SIO_000300: 5.903e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.58e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.917e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.046e1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 632
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4529
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47970
num of homozygotes: 0

South Asian
type: Population
allele count: 0
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allele num: 10109
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.506704836522525e-4
allele num: 6637
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9314
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.15e0

FS
type: SiteQuality
SIO_000300: 1.1494e1

DP
type: SiteQuality
SIO_000300: 1.539845e6

MQ
type: SiteQuality
SIO_000300: 5.847e1

VQSLOD
type: SiteQuality
SIO_000300: -1.673e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.5e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -4.006e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

QD
type: SiteQuality
SIO_000300: 1.39e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.09e0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4529
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8510
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 632
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.073537305421363e-4
allele num: 9315
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6637
num of homozygotes: 0

South Asian
type: Population
allele count: 0
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allele num: 10094
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DP
type: SiteQuality
SIO_000300: 1.539112e6

MQ
type: SiteQuality
SIO_000300: 5.956e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.59e0

MQRankSum
type: SiteQuality
SIO_000300: 6.3e-2

FS
type: SiteQuality
SIO_000300: 4.413e0

VQSLOD
type: SiteQuality
SIO_000300: -6.596e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.52e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.66e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.294e-1

QD
type: SiteQuality
SIO_000300: 1.792e1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 631
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9309
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4529
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6634
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8491
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FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.532075e6

VQSLOD
type: SiteQuality
SIO_000300: 3.38e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 3.29e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.168e-1

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47505
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9294
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African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8418
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.049979000419992e-4
allele num: 9524
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4524
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 623
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VQSLOD
type: SiteQuality
SIO_000300: 8.0e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 3.258e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.91e-2

DP
type: SiteQuality
SIO_000300: 1.497607e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6585
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8895
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European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47066
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4514
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 616
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QD
type: SiteQuality
SIO_000300: 2.029e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.013e0

FS
type: SiteQuality
SIO_000300: 9.01e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.15e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -4.66e-1

DP
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: -1.38e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.56e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.41e-1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4514
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 6575
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European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.129471890971039e-5
allele num: 46960
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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African
type: Population
allele count: 0
allele frequency: 0.0e0
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 616
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MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -4.286e-1

QD
type: SiteQuality
SIO_000300: 9.960000000000001e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.8e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.97e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.64e0

MQRankSum
type: SiteQuality
SIO_000300: 1.46e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.641e0

DP
type: SiteQuality
SIO_000300: 1.428865e6

East Asian
type: Population
allele count: 0
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allele num: 6552
num of homozygotes: 0

Latino
type: Population
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African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8231
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4510
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 610
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.143025523433984e-5
allele num: 46663
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.751e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

DP
type: SiteQuality
SIO_000300: 1.401489e6

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -3.78e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -8.68e-1

MQ
type: SiteQuality
SIO_000300: 5.971e1

VQSLOD
type: SiteQuality
SIO_000300: 1.47e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.120000000000001e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.000000000000001e-2

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8151
num of homozygotes: 0

East Asian
type: Population
allele count: 0
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4508
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.156287735035363e-5
allele num: 46376
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
type: Population
allele count: 0
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allele num: 9241
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BaseQRankSum
type: SiteQuality
SIO_000300: -1.632e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.24e0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -2.425e0

MQRankSum
type: SiteQuality
SIO_000300: 6.5e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 1.24e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.9e-3

QD
type: SiteQuality
SIO_000300: 2.033e1

DP
type: SiteQuality
SIO_000300: 1.375443e6

East Asian
type: Population
allele count: 0
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num of homozygotes: 0

South Asian
type: Population
allele count: 31
allele frequency: 1.10912343470483e-2
allele num: 2795
num of homozygotes: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 303
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4768
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 26484
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2038
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ClippingRankSum
type: SiteQuality
SIO_000300: -1.22e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.43e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -2.18e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.41e-1

FS
type: SiteQuality
SIO_000300: 2.764e0

MQRankSum
type: SiteQuality
SIO_000300: 2.61e-1

DP
type: SiteQuality
SIO_000300: 7.62827e5

VQSLOD
type: SiteQuality
SIO_000300: 1.12e0

QD
type: SiteQuality
SIO_000300: 1.796e1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 324
num of homozygotes: 0

African
type: Population
allele count: 0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4916
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 27066
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2089
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.38e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.27e-2

DP
type: SiteQuality
SIO_000300: 7.89481e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 1.75e0

FS
type: SiteQuality
SIO_000300: 3.427e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.75e0

QD
type: SiteQuality
SIO_000300: 1.249e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.42e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.681e0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2646
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 6.149116064565719e-5
allele num: 32525
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 416
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6755
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 4.148516905206389e-4
allele num: 4821
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.5600624024961e-4
allele num: 6410
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.057e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.1e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.18e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.12e-1

QD
type: SiteQuality
SIO_000300: 1.162e1

VQSLOD
type: SiteQuality
SIO_000300: 4.33e-1

DP
type: SiteQuality
SIO_000300: 9.84836e5

MQRankSum
type: SiteQuality
SIO_000300: 1.39e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.03e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

Latino
type: Population
allele count: 1
allele frequency: 1.505343971097396e-4
allele num: 6643
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5286
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 428
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2760
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4975
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European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 5.968011458582e-5
allele num: 33512
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.563e1

MQRankSum
type: SiteQuality
SIO_000300: 2.41e-1

DP
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SIO_000300: 1.017763e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.1e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.4e-3

FS
type: SiteQuality
SIO_000300: 4.611e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.01e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.77e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.63e-1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6752
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 434
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 2798
num of homozygotes: 0

East Asian
type: Population
allele count: 3
allele frequency: 5.938242280285036e-4
allele num: 5052
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African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6947
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European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 33889
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 2.803e1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 5.669999999999999e-1

DP
type: SiteQuality
SIO_000300: 1.030672e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.49e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.77e-1

MQ
type: SiteQuality
SIO_000300: 5.952e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -3.04e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.64e-1

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 34801
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7042
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South Asian
type: Population
allele count: 1
allele frequency: 1.693766937669377e-4
allele num: 5904
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6940
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2891
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 444
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QD
type: SiteQuality
SIO_000300: 2.836e1

BaseQRankSum
type: SiteQuality
SIO_000300: 8.3e-2

VQSLOD
type: SiteQuality
SIO_000300: -2.584e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.43e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.78e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.57e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.5e-3

DP
type: SiteQuality
SIO_000300: 1.055396e6

South Asian
type: Population
allele count: 1
allele frequency: 1.414627245720753e-4
allele num: 7069
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7277
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 36852
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5441
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 479
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7354
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BaseQRankSum
type: SiteQuality
SIO_000300: -3.94e-1

QD
type: SiteQuality
SIO_000300: 1.075e1

MQ
type: SiteQuality
SIO_000300: 5.957e1

FS
type: SiteQuality
SIO_000300: 1.207e0

MQRankSum
type: SiteQuality
SIO_000300: 8.26e-1

DP
type: SiteQuality
SIO_000300: 1.12104e6

VQSLOD
type: SiteQuality
SIO_000300: 4.83e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.75e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.8e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -5.21e-1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5457
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 5.406574394463668e-5
allele num: 36992
num of homozygotes: 0

African
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allele count: 1
allele frequency: 1.369112814895947e-4
allele num: 7304
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 481
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3184
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.0e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -3.599e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.29e-1

DP
type: SiteQuality
SIO_000300: 1.126559e6

VQSLOD
type: SiteQuality
SIO_000300: 2.04e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 4.15e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.45e-1

QD
type: SiteQuality
SIO_000300: 1.754e1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5594
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3298
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 492
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7433
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7543
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7395
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InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.1e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.2e0

FS
type: SiteQuality
SIO_000300: 2.792e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.709e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.26e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.426e0

DP
type: SiteQuality
SIO_000300: 1.155836e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 2.095e1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7521
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3428
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7760
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7648
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European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 39039
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.633e0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.044e0

MQRankSum
type: SiteQuality
SIO_000300: 1.34e0

MQ
type: SiteQuality
SIO_000300: 5.952e1

QD
type: SiteQuality
SIO_000300: 1.314e1

DP
type: SiteQuality
SIO_000300: 1.187372e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.7e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.51e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 9.97e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.58e-1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7742
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.267105930055753e-4
allele num: 7892
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 523
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 59
allele frequency: 1.489560453432301e-3
allele num: 39609
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3507
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5832
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MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 3.76e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.23e-1

DP
type: SiteQuality
SIO_000300: 1.207391e6

FS
type: SiteQuality
SIO_000300: 5.16e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.49e0

VQSLOD
type: SiteQuality
SIO_000300: 3.06e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.15e-1

QD
type: SiteQuality
SIO_000300: 1.847e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.239e-1

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 39712
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3525
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.711156741957563e-4
allele num: 5844
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 525
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7914
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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ReadPosRankSum
type: SiteQuality
SIO_000300: -1.43e0

VQSLOD
type: SiteQuality
SIO_000300: -5.745e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.52e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 1.18e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.6e-3

DP
type: SiteQuality
SIO_000300: 1.211408e6

FS
type: SiteQuality
SIO_000300: 1.287e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.753e0

QD
type: SiteQuality
SIO_000300: 1.365e1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5877
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7769
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3567
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 530
num of homozygotes: 0

Latino
type: Population
allele count: 25
allele frequency: 3.132832080200501e-3
allele num: 7980
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 40029
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.5e-2

VQSLOD
type: SiteQuality
SIO_000300: -8.743e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.08e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.46e-1

FS
type: SiteQuality
SIO_000300: 1.82e0

QD
type: SiteQuality
SIO_000300: 1.894e1

MQRankSum
type: SiteQuality
SIO_000300: -2.44e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.81e-1

DP
type: SiteQuality
SIO_000300: 1.219195e6

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 542
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European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.370567039635881e-5
allele num: 42184
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7810
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3879
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.272297e6

VQSLOD
type: SiteQuality
SIO_000300: 2.96e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 2.653e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.9e-3

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7288
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3883
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6179
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 42174
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 542
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MQRankSum
type: SiteQuality
SIO_000300: -1.997e0

DP
type: SiteQuality
SIO_000300: 1.271586e6

MQ
type: SiteQuality
SIO_000300: 5.973e1

VQSLOD
type: SiteQuality
SIO_000300: -1.323e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.07e-1

FS
type: SiteQuality
SIO_000300: 2.301e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.992e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.7e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 2.96e-1

QD
type: SiteQuality
SIO_000300: 9.119999999999999e0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3895
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 540
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8398
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 42085
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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South Asian
type: Population
allele count: 1
allele frequency: 1.411233418007338e-4
allele num: 7086
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.482e-1

MQ
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 3.7e-3

DP
type: SiteQuality
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FS
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 2.773e1

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 6201
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 2.372310393091832e-5
allele num: 42153
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 7094
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3901
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 544
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.267989e6

BaseQRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 1.334e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.9e-3

QD
type: SiteQuality
SIO_000300: 1.31e1

VQSLOD
type: SiteQuality
SIO_000300: 8.67e-1

MQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: 5.13e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.57e-1

MQ
type: SiteQuality
SIO_000300: 5.936e1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3906
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.283861856464244e-4
allele num: 7789
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 42100
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8415
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7029
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 540
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.94e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.8e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.66e-1

QD
type: SiteQuality
SIO_000300: 7.68e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.55e0

VQSLOD
type: SiteQuality
SIO_000300: -6.422e-1

MQ
type: SiteQuality
SIO_000300: 5.945e1

MQRankSum
type: SiteQuality
SIO_000300: -7.35e-1

DP
type: SiteQuality
SIO_000300: 1.262678e6

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7748
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8327
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6157
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3870
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 524
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.407897905128822e-5
allele num: 41530
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.8e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 8.141e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.2e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.69e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.95e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.95e-1

DP
type: SiteQuality
SIO_000300: 1.231441e6

VQSLOD
type: SiteQuality
SIO_000300: -5.461e-1

QD
type: SiteQuality
SIO_000300: 2.042e1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6339
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3847
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6140
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.424947863620932e-5
allele num: 41238
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8268
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 517
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -9.876e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.870000000000001e-1

QD
type: SiteQuality
SIO_000300: 5.82e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.78e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.81e-1

DP
type: SiteQuality
SIO_000300: 1.221831e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.9e-3

FS
type: SiteQuality
SIO_000300: 3.329e0

MQRankSum
type: SiteQuality
SIO_000300: -1.37e-1