19-57744934-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57744934
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 57744934
    reference: chr 19
allele count: 2
allele frequency: 1.647419317638919e-5
allele num: 121402
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000469983
  ensembl transcript: ENST00000599062
  gene symbol: AURKC
  hgvsc: ENST00000599062.1:c.533A>T
  hgvsp: ENSP00000469983.1:p.Lys178Met
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000406798
  ensembl transcript: ENST00000448930
  gene symbol: AURKC
  hgvsc: ENST00000448930.1:c.440A>T
  hgvsp: ENSP00000406798.1:p.Lys147Met
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000470465
  ensembl transcript: ENST00000596375
  gene symbol: AURKC
  hgvsc: ENST00000596375.1:c.*103A>T
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000302898
  ensembl transcript: ENST00000302804
  gene symbol: AURKC
  hgvsc: ENST00000302804.7:c.542A>T
  hgvsp: ENSP00000302898.6:p.Lys181Met
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000469894
  ensembl transcript: ENST00000594599
  gene symbol: AURKC
  hgvsc: ENST00000594599.1:c.68+881A>T
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000471830
  ensembl transcript: ENST00000598785
  gene symbol: AURKC
  hgvsc: ENST00000598785.1:c.440A>T
  hgvsp: ENSP00000471830.1:p.Lys147Met
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000468918
  ensembl transcript: ENST00000601799
  gene symbol: AURKC
  hgvsc: ENST00000601799.1:c.*841A>T
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000407162
  ensembl transcript: ENST00000415300
  gene symbol: AURKC
  hgvsc: ENST00000415300.2:c.485A>T
  hgvsp: ENSP00000407162.1:p.Lys162Met
  variant of: http://identifiers.org/hgnc/11391
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1270
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1357
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5820
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2056
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8083
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3740
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1636
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1134
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6626
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7908
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7784
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5180
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3526
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2708
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1006
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 856
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6343
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Lys181Met
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
population: South Asian
population: Other
reference allele: A
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD

http://identifiers.org/exac.variant/19-57744940-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57744940
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 57744940
    reference: chr 19
allele count: 1
allele frequency: 8.237096588194593e-6
allele num: 121402
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000302898
  ensembl transcript: ENST00000302804
  gene symbol: AURKC
  hgvsc: ENST00000302804.7:c.548C>A
  hgvsp: ENSP00000302898.6:p.Ala183Glu
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000469894
  ensembl transcript: ENST00000594599
  gene symbol: AURKC
  hgvsc: ENST00000594599.1:c.68+887C>A
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000469983
  ensembl transcript: ENST00000599062
  gene symbol: AURKC
  hgvsc: ENST00000599062.1:c.539C>A
  hgvsp: ENSP00000469983.1:p.Ala180Glu
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000471830
  ensembl transcript: ENST00000598785
  gene symbol: AURKC
  hgvsc: ENST00000598785.1:c.446C>A
  hgvsp: ENSP00000471830.1:p.Ala149Glu
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000468918
  ensembl transcript: ENST00000601799
  gene symbol: AURKC
  hgvsc: ENST00000601799.1:c.*847C>A
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000406798
  ensembl transcript: ENST00000448930
  gene symbol: AURKC
  hgvsc: ENST00000448930.1:c.446C>A
  hgvsp: ENSP00000406798.1:p.Ala149Glu
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000470465
  ensembl transcript: ENST00000596375
  gene symbol: AURKC
  hgvsc: ENST00000596375.1:c.*109C>A
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000407162
  ensembl transcript: ENST00000415300
  gene symbol: AURKC
  hgvsc: ENST00000415300.2:c.491C>A
  hgvsp: ENSP00000407162.1:p.Ala164Glu
  variant of: http://identifiers.org/hgnc/11391
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1361
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1270
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3527
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6627
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7781
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2708
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1005
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3740
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7906
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1133
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8084
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5821
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 856
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5180
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1636
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2056
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2278
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3908
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Ala183Glu
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: South Asian
population: African
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: C
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum

19-57744940-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57744940
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 57744940
    reference: chr 19
allele count: 1
allele frequency: 8.237096588194593e-6
allele num: 121402
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000471830
  ensembl transcript: ENST00000598785
  gene symbol: AURKC
  hgvsc: ENST00000598785.1:c.446C>T
  hgvsp: ENSP00000471830.1:p.Ala149Val
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000469894
  ensembl transcript: ENST00000594599
  gene symbol: AURKC
  hgvsc: ENST00000594599.1:c.68+887C>T
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000302898
  ensembl transcript: ENST00000302804
  gene symbol: AURKC
  hgvsc: ENST00000302804.7:c.548C>T
  hgvsp: ENSP00000302898.6:p.Ala183Val
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000406798
  ensembl transcript: ENST00000448930
  gene symbol: AURKC
  hgvsc: ENST00000448930.1:c.446C>T
  hgvsp: ENSP00000406798.1:p.Ala149Val
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000470465
  ensembl transcript: ENST00000596375
  gene symbol: AURKC
  hgvsc: ENST00000596375.1:c.*109C>T
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000468918
  ensembl transcript: ENST00000601799
  gene symbol: AURKC
  hgvsc: ENST00000601799.1:c.*847C>T
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000469983
  ensembl transcript: ENST00000599062
  gene symbol: AURKC
  hgvsc: ENST00000599062.1:c.539C>T
  hgvsp: ENSP00000469983.1:p.Ala180Val
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000407162
  ensembl transcript: ENST00000415300
  gene symbol: AURKC
  hgvsc: ENST00000415300.2:c.491C>T
  hgvsp: ENSP00000407162.1:p.Ala164Val
  variant of: http://identifiers.org/hgnc/11391
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8084
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1361
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3740
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1133
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1636
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2708
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7906
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7781
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6627
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1270
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1005
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2056
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3527
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5180
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5821
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 856
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2258
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34364
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Ala183Val
num of homozygotes: 0
population: African
population: South Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: East Asian
population: European (Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff

19-57744941-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57744941
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 57744941
    reference: chr 19
allele count: 1
allele frequency: 8.237232289950576e-6
allele num: 121400
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000469894
  ensembl transcript: ENST00000594599
  gene symbol: AURKC
  hgvsc: ENST00000594599.1:c.68+888A>G
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000470465
  ensembl transcript: ENST00000596375
  gene symbol: AURKC
  hgvsc: ENST00000596375.1:c.*110A>G
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000302898
  ensembl transcript: ENST00000302804
  gene symbol: AURKC
  hgvsc: ENST00000302804.7:c.549A>G
  hgvsp: ENST00000302804.7:c.549A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000406798
  ensembl transcript: ENST00000448930
  gene symbol: AURKC
  hgvsc: ENST00000448930.1:c.447A>G
  hgvsp: ENST00000448930.1:c.447A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000471830
  ensembl transcript: ENST00000598785
  gene symbol: AURKC
  hgvsc: ENST00000598785.1:c.447A>G
  hgvsp: ENST00000598785.1:c.447A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000469983
  ensembl transcript: ENST00000599062
  gene symbol: AURKC
  hgvsc: ENST00000599062.1:c.540A>G
  hgvsp: ENST00000599062.1:c.540A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000468918
  ensembl transcript: ENST00000601799
  gene symbol: AURKC
  hgvsc: ENST00000601799.1:c.*848A>G
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000407162
  ensembl transcript: ENST00000415300
  gene symbol: AURKC
  hgvsc: ENST00000415300.2:c.492A>G
  hgvsp: ENST00000415300.2:c.492A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11391
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6625
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5822
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 856
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3740
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2708
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1005
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1364
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7780
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2055
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1270
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1636
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3527
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1133
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7905
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5180
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8084
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3952
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2278
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Ala183Ala
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Other
population: European (Finnish)
population: African
population: Latino
reference allele: A
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ

19-57744950-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57744950
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 57744950
    reference: chr 19
allele count: 3
allele frequency: 2.47133254250692e-5
allele num: 121392
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000406798
  ensembl transcript: ENST00000448930
  gene symbol: AURKC
  hgvsc: ENST00000448930.1:c.456C>G
  hgvsp: ENST00000448930.1:c.456C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000469983
  ensembl transcript: ENST00000599062
  gene symbol: AURKC
  hgvsc: ENST00000599062.1:c.549C>G
  hgvsp: ENST00000599062.1:c.549C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000407162
  ensembl transcript: ENST00000415300
  gene symbol: AURKC
  hgvsc: ENST00000415300.2:c.501C>G
  hgvsp: ENST00000415300.2:c.501C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000469894
  ensembl transcript: ENST00000594599
  gene symbol: AURKC
  hgvsc: ENST00000594599.1:c.68+897C>G
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000471830
  ensembl transcript: ENST00000598785
  gene symbol: AURKC
  hgvsc: ENST00000598785.1:c.456C>G
  hgvsp: ENST00000598785.1:c.456C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000302898
  ensembl transcript: ENST00000302804
  gene symbol: AURKC
  hgvsc: ENST00000302804.7:c.558C>G
  hgvsp: ENST00000302804.7:c.558C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000470465
  ensembl transcript: ENST00000596375
  gene symbol: AURKC
  hgvsc: ENST00000596375.1:c.*119C>G
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000468918
  ensembl transcript: ENST00000601799
  gene symbol: AURKC
  hgvsc: ENST00000601799.1:c.*857C>G
  variant of: http://identifiers.org/hgnc/11391
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5181
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1366
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2055
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7905
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6625
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1270
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2708
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8083
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 856
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5807
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1636
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7785
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1133
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1006
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3526
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3739
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2251
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Gly186Gly
num of homozygotes: 0
population: Other
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum

19-57744955-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57744955
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 57744955
    reference: chr 19
allele count: 1
allele frequency: 8.237367996177861e-6
allele num: 121398
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000468918
  ensembl transcript: ENST00000601799
  gene symbol: AURKC
  hgvsc: ENST00000601799.1:c.*862C>G
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000302898
  ensembl transcript: ENST00000302804
  gene symbol: AURKC
  hgvsc: ENST00000302804.7:c.563C>G
  hgvsp: ENSP00000302898.6:p.Ser188Cys
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000470465
  ensembl transcript: ENST00000596375
  gene symbol: AURKC
  hgvsc: ENST00000596375.1:c.*124C>G
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000407162
  ensembl transcript: ENST00000415300
  gene symbol: AURKC
  hgvsc: ENST00000415300.2:c.506C>G
  hgvsp: ENSP00000407162.1:p.Ser169Cys
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000469983
  ensembl transcript: ENST00000599062
  gene symbol: AURKC
  hgvsc: ENST00000599062.1:c.554C>G
  hgvsp: ENSP00000469983.1:p.Ser185Cys
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000471830
  ensembl transcript: ENST00000598785
  gene symbol: AURKC
  hgvsc: ENST00000598785.1:c.461C>G
  hgvsp: ENSP00000471830.1:p.Ser154Cys
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000406798
  ensembl transcript: ENST00000448930
  gene symbol: AURKC
  hgvsc: ENST00000448930.1:c.461C>G
  hgvsp: ENSP00000406798.1:p.Ser154Cys
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000469894
  ensembl transcript: ENST00000594599
  gene symbol: AURKC
  hgvsc: ENST00000594599.1:c.68+902C>G
  variant of: http://identifiers.org/hgnc/11391
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1270
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2708
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7901
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2056
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5808
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1636
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1133
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1006
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3739
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5181
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8074
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1378
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 856
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3525
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6623
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7778
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2275
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34359
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3906
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Ser188Cys
num of homozygotes: 0
population: African
population: European (Finnish)
population: South Asian
population: Other
population: Latino
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: ReadPosRankSum

19-57744964-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57744964
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 57744964
    reference: chr 19
allele count: 1
allele frequency: 8.237503706876667e-6
allele num: 121396
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000470465
  ensembl transcript: ENST00000596375
  gene symbol: AURKC
  hgvsc: ENST00000596375.1:c.*133C>T
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000302898
  ensembl transcript: ENST00000302804
  gene symbol: AURKC
  hgvsc: ENST00000302804.7:c.572C>T
  hgvsp: ENSP00000302898.6:p.Thr191Ile
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000469894
  ensembl transcript: ENST00000594599
  gene symbol: AURKC
  hgvsc: ENST00000594599.1:c.68+911C>T
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000407162
  ensembl transcript: ENST00000415300
  gene symbol: AURKC
  hgvsc: ENST00000415300.2:c.515C>T
  hgvsp: ENSP00000407162.1:p.Thr172Ile
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000468918
  ensembl transcript: ENST00000601799
  gene symbol: AURKC
  hgvsc: ENST00000601799.1:c.*871C>T
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000406798
  ensembl transcript: ENST00000448930
  gene symbol: AURKC
  hgvsc: ENST00000448930.1:c.470C>T
  hgvsp: ENSP00000406798.1:p.Thr157Ile
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000471830
  ensembl transcript: ENST00000598785
  gene symbol: AURKC
  hgvsc: ENST00000598785.1:c.470C>T
  hgvsp: ENSP00000471830.1:p.Thr157Ile
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000469983
  ensembl transcript: ENST00000599062
  gene symbol: AURKC
  hgvsc: ENST00000599062.1:c.563C>T
  hgvsp: ENSP00000469983.1:p.Thr188Ile
  variant of: http://identifiers.org/hgnc/11391
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1133
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3525
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 856
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2056
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7896
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8069
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6622
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7765
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1635
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1006
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3739
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1387
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2708
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5181
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5806
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1270
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2249
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3717
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3900
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Thr191Ile
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: East Asian
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: QD

19-57744966-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57744966
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 57744966
    reference: chr 19
allele count: 1
allele frequency: 8.237503706876667e-6
allele num: 121396
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000471830
  ensembl transcript: ENST00000598785
  gene symbol: AURKC
  hgvsc: ENST00000598785.1:c.472C>T
  hgvsp: ENSP00000471830.1:p.Pro158Ser
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000468918
  ensembl transcript: ENST00000601799
  gene symbol: AURKC
  hgvsc: ENST00000601799.1:c.*873C>T
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000407162
  ensembl transcript: ENST00000415300
  gene symbol: AURKC
  hgvsc: ENST00000415300.2:c.517C>T
  hgvsp: ENSP00000407162.1:p.Pro173Ser
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000469983
  ensembl transcript: ENST00000599062
  gene symbol: AURKC
  hgvsc: ENST00000599062.1:c.565C>T
  hgvsp: ENSP00000469983.1:p.Pro189Ser
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000469894
  ensembl transcript: ENST00000594599
  gene symbol: AURKC
  hgvsc: ENST00000594599.1:c.68+913C>T
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000470465
  ensembl transcript: ENST00000596375
  gene symbol: AURKC
  hgvsc: ENST00000596375.1:c.*135C>T
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000302898
  ensembl transcript: ENST00000302804
  gene symbol: AURKC
  hgvsc: ENST00000302804.7:c.574C>T
  hgvsp: ENSP00000302898.6:p.Pro192Ser
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000406798
  ensembl transcript: ENST00000448930
  gene symbol: AURKC
  hgvsc: ENST00000448930.1:c.472C>T
  hgvsp: ENSP00000406798.1:p.Pro158Ser
  variant of: http://identifiers.org/hgnc/11391
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1386
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3738
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8066
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6622
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3525
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7896
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1635
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1006
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5810
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5180
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 856
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2709
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7758
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1270
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2056
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1133
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6366
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3827
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Pro192Ser
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Finnish)
population: African
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: DP

19-57744967-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57744967
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 57744967
    reference: chr 19
allele count: 1
allele frequency: 8.237775141689733e-6
allele num: 121392
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000471830
  ensembl transcript: ENST00000598785
  gene symbol: AURKC
  hgvsc: ENST00000598785.1:c.473C>T
  hgvsp: ENSP00000471830.1:p.Pro158Leu
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000468918
  ensembl transcript: ENST00000601799
  gene symbol: AURKC
  hgvsc: ENST00000601799.1:c.*874C>T
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000302898
  ensembl transcript: ENST00000302804
  gene symbol: AURKC
  hgvsc: ENST00000302804.7:c.575C>T
  hgvsp: ENSP00000302898.6:p.Pro192Leu
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000407162
  ensembl transcript: ENST00000415300
  gene symbol: AURKC
  hgvsc: ENST00000415300.2:c.518C>T
  hgvsp: ENSP00000407162.1:p.Pro173Leu
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000406798
  ensembl transcript: ENST00000448930
  gene symbol: AURKC
  hgvsc: ENST00000448930.1:c.473C>T
  hgvsp: ENSP00000406798.1:p.Pro158Leu
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000470465
  ensembl transcript: ENST00000596375
  gene symbol: AURKC
  hgvsc: ENST00000596375.1:c.*136C>T
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000469983
  ensembl transcript: ENST00000599062
  gene symbol: AURKC
  hgvsc: ENST00000599062.1:c.566C>T
  hgvsp: ENSP00000469983.1:p.Pro189Leu
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000469894
  ensembl transcript: ENST00000594599
  gene symbol: AURKC
  hgvsc: ENST00000594599.1:c.68+914C>T
  variant of: http://identifiers.org/hgnc/11391
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7896
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1133
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3526
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6620
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3737
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2055
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5810
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1635
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8065
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1386
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1006
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7758
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1270
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 856
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2708
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5181
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2243
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Pro192Leu
num of homozygotes: 0
population: East Asian
population: Latino
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: MQ

19-57744986-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57744986
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 57744986
    reference: chr 19
allele count: 47
allele frequency: 3.872264698128131e-4
allele num: 121376
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000471830
  ensembl transcript: ENST00000598785
  gene symbol: AURKC
  hgvsc: ENST00000598785.1:c.482+10G>A
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000406798
  ensembl transcript: ENST00000448930
  gene symbol: AURKC
  hgvsc: ENST00000448930.1:c.482+10G>A
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000469894
  ensembl transcript: ENST00000594599
  gene symbol: AURKC
  hgvsc: ENST00000594599.1:c.68+933G>A
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000470465
  ensembl transcript: ENST00000596375
  gene symbol: AURKC
  hgvsc: ENST00000596375.1:c.*145+10G>A
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000469983
  ensembl transcript: ENST00000599062
  gene symbol: AURKC
  hgvsc: ENST00000599062.1:c.575+10G>A
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000468918
  ensembl transcript: ENST00000601799
  gene symbol: AURKC
  hgvsc: ENST00000601799.1:c.*883+10G>A
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000407162
  ensembl transcript: ENST00000415300
  gene symbol: AURKC
  hgvsc: ENST00000415300.2:c.527+10G>A
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000302898
  ensembl transcript: ENST00000302804
  gene symbol: AURKC
  hgvsc: ENST00000302804.7:c.584+10G>A
  variant of: http://identifiers.org/hgnc/11391
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3734
  bin: 5.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1132
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2056
  bin: 6.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 6615
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1425
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5174
  bin: 5.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7895
  bin: 4.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 1005
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5729
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2709
  bin: 6.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 8044
  bin: 3.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1271
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1635
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 856
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7709
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3531
  bin: 9.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3890
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: East Asian
population: African
population: Latino
population: South Asian
reference allele: G
site quality: MQ
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum

19-57744986-G-GT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57744986
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 57744987
    reference: chr 19
allele count: 1
allele frequency: 8.238861059847087e-6
allele num: 121376
alternate allele: GT
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000469983
  ensembl transcript: ENST00000599062
  gene symbol: AURKC
  hgvsc: ENST00000599062.1:c.575+11dupT
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000470465
  ensembl transcript: ENST00000596375
  gene symbol: AURKC
  hgvsc: ENST00000596375.1:c.*145+11dupT
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000471830
  ensembl transcript: ENST00000598785
  gene symbol: AURKC
  hgvsc: ENST00000598785.1:c.482+11dupT
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000406798
  ensembl transcript: ENST00000448930
  gene symbol: AURKC
  hgvsc: ENST00000448930.1:c.482+11dupT
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000469894
  ensembl transcript: ENST00000594599
  gene symbol: AURKC
  hgvsc: ENST00000594599.1:c.68+934dupT
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000302898
  ensembl transcript: ENST00000302804
  gene symbol: AURKC
  hgvsc: ENST00000302804.7:c.584+11dupT
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000407162
  ensembl transcript: ENST00000415300
  gene symbol: AURKC
  hgvsc: ENST00000415300.2:c.527+11dupT
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000468918
  ensembl transcript: ENST00000601799
  gene symbol: AURKC
  hgvsc: ENST00000601799.1:c.*883+11dupT
  variant of: http://identifiers.org/hgnc/11391
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1635
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3531
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1425
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5174
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7895
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1132
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1005
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2056
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3734
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5729
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2709
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 856
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1271
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7709
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8044
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6615
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3817
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6302
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3890
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: African
population: Latino
population: Other
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: DP

19-57744989-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57744989
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 57744989
    reference: chr 19
allele count: 1
allele frequency: 8.2387253044209e-6
allele num: 121378
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000406798
  ensembl transcript: ENST00000448930
  gene symbol: AURKC
  hgvsc: ENST00000448930.1:c.482+13G>A
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000469983
  ensembl transcript: ENST00000599062
  gene symbol: AURKC
  hgvsc: ENST00000599062.1:c.575+13G>A
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000302898
  ensembl transcript: ENST00000302804
  gene symbol: AURKC
  hgvsc: ENST00000302804.7:c.584+13G>A
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000471830
  ensembl transcript: ENST00000598785
  gene symbol: AURKC
  hgvsc: ENST00000598785.1:c.482+13G>A
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000468918
  ensembl transcript: ENST00000601799
  gene symbol: AURKC
  hgvsc: ENST00000601799.1:c.*883+13G>A
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000469894
  ensembl transcript: ENST00000594599
  gene symbol: AURKC
  hgvsc: ENST00000594599.1:c.68+936G>A
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000407162
  ensembl transcript: ENST00000415300
  gene symbol: AURKC
  hgvsc: ENST00000415300.2:c.527+13G>A
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000470465
  ensembl transcript: ENST00000596375
  gene symbol: AURKC
  hgvsc: ENST00000596375.1:c.*145+13G>A
  variant of: http://identifiers.org/hgnc/11391
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7888
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2704
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8032
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6610
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5735
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5172
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 856
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1271
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7713
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1439
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3525
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2052
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1131
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1005
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1633
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3728
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3688
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6313
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Other
population: Latino
population: South Asian
population: East Asian
reference allele: G
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: BaseQRankSum

19-57744991-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57744991
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 57744991
    reference: chr 19
allele count: 4
allele frequency: 3.295653033648617e-5
allele num: 121372
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000471830
  ensembl transcript: ENST00000598785
  gene symbol: AURKC
  hgvsc: ENST00000598785.1:c.482+15G>A
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000469894
  ensembl transcript: ENST00000594599
  gene symbol: AURKC
  hgvsc: ENST00000594599.1:c.68+938G>A
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000406798
  ensembl transcript: ENST00000448930
  gene symbol: AURKC
  hgvsc: ENST00000448930.1:c.482+15G>A
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000302898
  ensembl transcript: ENST00000302804
  gene symbol: AURKC
  hgvsc: ENST00000302804.7:c.584+15G>A
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000468918
  ensembl transcript: ENST00000601799
  gene symbol: AURKC
  hgvsc: ENST00000601799.1:c.*883+15G>A
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000469983
  ensembl transcript: ENST00000599062
  gene symbol: AURKC
  hgvsc: ENST00000599062.1:c.575+15G>A
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000470465
  ensembl transcript: ENST00000596375
  gene symbol: AURKC
  hgvsc: ENST00000596375.1:c.*145+15G>A
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000407162
  ensembl transcript: ENST00000415300
  gene symbol: AURKC
  hgvsc: ENST00000415300.2:c.527+15G>A
  variant of: http://identifiers.org/hgnc/11391
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5171
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6610
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7707
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8027
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1004
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5708
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1131
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1442
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7888
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1271
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2704
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3525
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 857
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3729
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2052
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1633
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3900
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3817
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2232
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: African
reference allele: G
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum

19-57744996-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57744996
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 57744996
    reference: chr 19
allele count: 1
allele frequency: 8.239811473113496e-6
allele num: 121362
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000471830
  ensembl transcript: ENST00000598785
  gene symbol: AURKC
  hgvsc: ENST00000598785.1:c.482+20T>G
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000302898
  ensembl transcript: ENST00000302804
  gene symbol: AURKC
  hgvsc: ENST00000302804.7:c.584+20T>G
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000470465
  ensembl transcript: ENST00000596375
  gene symbol: AURKC
  hgvsc: ENST00000596375.1:c.*145+20T>G
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000406798
  ensembl transcript: ENST00000448930
  gene symbol: AURKC
  hgvsc: ENST00000448930.1:c.482+20T>G
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000468918
  ensembl transcript: ENST00000601799
  gene symbol: AURKC
  hgvsc: ENST00000601799.1:c.*883+20T>G
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000469894
  ensembl transcript: ENST00000594599
  gene symbol: AURKC
  hgvsc: ENST00000594599.1:c.68+943T>G
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000469983
  ensembl transcript: ENST00000599062
  gene symbol: AURKC
  hgvsc: ENST00000599062.1:c.575+20T>G
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000407162
  ensembl transcript: ENST00000415300
  gene symbol: AURKC
  hgvsc: ENST00000415300.2:c.527+20T>G
  variant of: http://identifiers.org/hgnc/11391
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7687
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1473
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1633
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5679
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1131
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1271
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6608
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8017
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3728
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1005
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2703
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 856
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7882
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5170
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2052
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3524
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3891
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3678
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3852
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: T
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: BaseQRankSum

19-57744998-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57744998
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 57744998
    reference: chr 19
allele count: 3
allele frequency: 2.471861971227527e-5
allele num: 121366
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000469983
  ensembl transcript: ENST00000599062
  gene symbol: AURKC
  hgvsc: ENST00000599062.1:c.575+22G>C
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000468918
  ensembl transcript: ENST00000601799
  gene symbol: AURKC
  hgvsc: ENST00000601799.1:c.*883+22G>C
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000302898
  ensembl transcript: ENST00000302804
  gene symbol: AURKC
  hgvsc: ENST00000302804.7:c.584+22G>C
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000407162
  ensembl transcript: ENST00000415300
  gene symbol: AURKC
  hgvsc: ENST00000415300.2:c.527+22G>C
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000406798
  ensembl transcript: ENST00000448930
  gene symbol: AURKC
  hgvsc: ENST00000448930.1:c.482+22G>C
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000470465
  ensembl transcript: ENST00000596375
  gene symbol: AURKC
  hgvsc: ENST00000596375.1:c.*145+22G>C
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000469894
  ensembl transcript: ENST00000594599
  gene symbol: AURKC
  hgvsc: ENST00000594599.1:c.68+945G>C
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000471830
  ensembl transcript: ENST00000598785
  gene symbol: AURKC
  hgvsc: ENST00000598785.1:c.482+22G>C
  variant of: http://identifiers.org/hgnc/11391
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7686
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3525
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5671
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1473
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1131
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1271
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1632
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6607
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7881
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 856
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3729
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2703
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2052
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8014
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5170
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1005
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34313
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3808
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3838
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: Other
population: East Asian
population: African
population: South Asian
reference allele: G
site quality: QD
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP

19-57745014-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57745014
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 57745014
    reference: chr 19
allele count: 2
allele frequency: 1.648532805802836e-5
allele num: 121320
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000469894
  ensembl transcript: ENST00000594599
  gene symbol: AURKC
  hgvsc: ENST00000594599.1:c.68+961C>G
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000469983
  ensembl transcript: ENST00000599062
  gene symbol: AURKC
  hgvsc: ENST00000599062.1:c.575+38C>G
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000302898
  ensembl transcript: ENST00000302804
  gene symbol: AURKC
  hgvsc: ENST00000302804.7:c.584+38C>G
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000471830
  ensembl transcript: ENST00000598785
  gene symbol: AURKC
  hgvsc: ENST00000598785.1:c.482+38C>G
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000407162
  ensembl transcript: ENST00000415300
  gene symbol: AURKC
  hgvsc: ENST00000415300.2:c.527+38C>G
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000468918
  ensembl transcript: ENST00000601799
  gene symbol: AURKC
  hgvsc: ENST00000601799.1:c.*883+38C>G
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000470465
  ensembl transcript: ENST00000596375
  gene symbol: AURKC
  hgvsc: ENST00000596375.1:c.*145+38C>G
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000406798
  ensembl transcript: ENST00000448930
  gene symbol: AURKC
  hgvsc: ENST00000448930.1:c.482+38C>G
  variant of: http://identifiers.org/hgnc/11391
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 1131
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1501
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1271
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2053
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7954
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2699
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5157
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3724
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1632
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 856
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7850
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 661
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6583
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7470
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5387
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1006
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3525
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 220
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 264
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 139
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2169
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 147
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5745
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 1
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: East Asian
population: Other
population: Latino
population: African
reference allele: C
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD

19-57745019-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57745019
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 57745019
    reference: chr 19
allele count: 1
allele frequency: 8.24279991427488e-6
allele num: 121318
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000469983
  ensembl transcript: ENST00000599062
  gene symbol: AURKC
  hgvsc: ENST00000599062.1:c.575+43T>C
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000471830
  ensembl transcript: ENST00000598785
  gene symbol: AURKC
  hgvsc: ENST00000598785.1:c.482+43T>C
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000470465
  ensembl transcript: ENST00000596375
  gene symbol: AURKC
  hgvsc: ENST00000596375.1:c.*145+43T>C
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000469894
  ensembl transcript: ENST00000594599
  gene symbol: AURKC
  hgvsc: ENST00000594599.1:c.68+966T>C
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000302898
  ensembl transcript: ENST00000302804
  gene symbol: AURKC
  hgvsc: ENST00000302804.7:c.584+43T>C
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000407162
  ensembl transcript: ENST00000415300
  gene symbol: AURKC
  hgvsc: ENST00000415300.2:c.527+43T>C
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000468918
  ensembl transcript: ENST00000601799
  gene symbol: AURKC
  hgvsc: ENST00000601799.1:c.*883+43T>C
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000406798
  ensembl transcript: ENST00000448930
  gene symbol: AURKC
  hgvsc: ENST00000448930.1:c.482+43T>C
  variant of: http://identifiers.org/hgnc/11391
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1271
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1132
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2052
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7829
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3723
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 856
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5154
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5145
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 811
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6572
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1816
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7320
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2697
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3526
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1631
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1005
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7914
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 332
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34272
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 143
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3638
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3784
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 390
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2229
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: African
population: Other
reference allele: T
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum

19-57746201-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57746201
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 57746201
    reference: chr 19
allele count: 2
allele frequency: 1.678500092317505e-5
allele num: 119154
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000406798
  ensembl transcript: ENST00000448930
  gene symbol: AURKC
  hgvsc: ENST00000448930.1:c.483-51C>T
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000470465
  ensembl transcript: ENST00000596375
  gene symbol: AURKC
  hgvsc: ENST00000596375.1:c.*146-51C>T
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000469983
  ensembl transcript: ENST00000599062
  gene symbol: AURKC
  hgvsc: ENST00000599062.1:c.576-51C>T
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000468918
  ensembl transcript: ENST00000601799
  gene symbol: AURKC
  hgvsc: ENST00000601799.1:c.*884-51C>T
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000302898
  ensembl transcript: ENST00000302804
  gene symbol: AURKC
  hgvsc: ENST00000302804.7:c.585-51C>T
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000471830
  ensembl transcript: ENST00000598785
  gene symbol: AURKC
  hgvsc: ENST00000598785.1:c.483-51C>T
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000469894
  ensembl transcript: ENST00000594599
  gene symbol: AURKC
  hgvsc: ENST00000594599.1:c.69-51C>T
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000407162
  ensembl transcript: ENST00000415300
  gene symbol: AURKC
  hgvsc: ENST00000415300.2:c.528-51C>T
  variant of: http://identifiers.org/hgnc/11391
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10196
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 863
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5980
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3618
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1068
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1676
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 590
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5739
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12429
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13881
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2451
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 620
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2945
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3743
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1299
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5255
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2372
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Latino
population: African
population: Other
population: East Asian
reference allele: C
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP

19-57746206-C-CCTGGGCCT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57746206
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 57746214
    reference: chr 19
allele count: 1
allele frequency: 8.374227477515199e-6
allele num: 119414
alternate allele: CCTGGGCCT
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000470465
  ensembl transcript: ENST00000596375
  gene symbol: AURKC
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000302898
  ensembl transcript: ENST00000302804
  gene symbol: AURKC
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000468918
  ensembl transcript: ENST00000601799
  gene symbol: AURKC
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000469894
  ensembl transcript: ENST00000594599
  gene symbol: AURKC
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000469983
  ensembl transcript: ENST00000599062
  gene symbol: AURKC
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000406798
  ensembl transcript: ENST00000448930
  gene symbol: AURKC
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000407162
  ensembl transcript: ENST00000415300
  gene symbol: AURKC
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000471830
  ensembl transcript: ENST00000598785
  gene symbol: AURKC
  variant of: http://identifiers.org/hgnc/11391
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16612
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 853
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1068
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10465
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 620
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3622
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5663
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9415
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6076
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2455
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1677
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2701
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6497
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 470
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3769
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2251
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1081
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2339
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14247
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: African
population: East Asian
population: Latino
population: Other
reference allele: C
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQ

19-57746216-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57746216
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 57746216
    reference: chr 19
allele count: 1
allele frequency: 8.353381448810478e-6
allele num: 119712
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000469894
  ensembl transcript: ENST00000594599
  gene symbol: AURKC
  hgvsc: ENST00000594599.1:c.69-36T>G
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000302898
  ensembl transcript: ENST00000302804
  gene symbol: AURKC
  hgvsc: ENST00000302804.7:c.585-36T>G
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000406798
  ensembl transcript: ENST00000448930
  gene symbol: AURKC
  hgvsc: ENST00000448930.1:c.483-36T>G
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000468918
  ensembl transcript: ENST00000601799
  gene symbol: AURKC
  hgvsc: ENST00000601799.1:c.*884-36T>G
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000471830
  ensembl transcript: ENST00000598785
  gene symbol: AURKC
  hgvsc: ENST00000598785.1:c.483-36T>G
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000407162
  ensembl transcript: ENST00000415300
  gene symbol: AURKC
  hgvsc: ENST00000415300.2:c.528-36T>G
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000469983
  ensembl transcript: ENST00000599062
  gene symbol: AURKC
  hgvsc: ENST00000599062.1:c.576-36T>G
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000470465
  ensembl transcript: ENST00000596375
  gene symbol: AURKC
  hgvsc: ENST00000596375.1:c.*146-36T>G
  variant of: http://identifiers.org/hgnc/11391
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1678
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1068
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 805
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6565
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 620
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3658
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11534
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22367
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4355
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3432
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2462
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 763
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4073
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3213
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1144
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1894
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 873
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: European (Non-Finnish)
population: East Asian
population: Other
population: South Asian
population: European (Finnish)
reference allele: T
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: DP

19-57746225-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57746225
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 57746225
    reference: chr 19
allele count: 1
allele frequency: 8.333055564814507e-6
allele num: 120004
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000468918
  ensembl transcript: ENST00000601799
  gene symbol: AURKC
  hgvsc: ENST00000601799.1:c.*884-27C>T
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000406798
  ensembl transcript: ENST00000448930
  gene symbol: AURKC
  hgvsc: ENST00000448930.1:c.483-27C>T
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000469983
  ensembl transcript: ENST00000599062
  gene symbol: AURKC
  hgvsc: ENST00000599062.1:c.576-27C>T
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000302898
  ensembl transcript: ENST00000302804
  gene symbol: AURKC
  hgvsc: ENST00000302804.7:c.585-27C>T
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000471830
  ensembl transcript: ENST00000598785
  gene symbol: AURKC
  hgvsc: ENST00000598785.1:c.483-27C>T
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000407162
  ensembl transcript: ENST00000415300
  gene symbol: AURKC
  hgvsc: ENST00000415300.2:c.528-27C>T
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000469894
  ensembl transcript: ENST00000594599
  gene symbol: AURKC
  hgvsc: ENST00000594599.1:c.69-27C>T
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000470465
  ensembl transcript: ENST00000596375
  gene symbol: AURKC
  hgvsc: ENST00000596375.1:c.*146-27C>T
  variant of: http://identifiers.org/hgnc/11391
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1678
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 664
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 620
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25044
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2474
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1068
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2499
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12506
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7043
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1250
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3703
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 586
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3310
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 887
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 376
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9201
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4298
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: Latino
population: East Asian
population: South Asian
population: African
population: European (Finnish)
reference allele: C
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: ClippingRankSum

19-57746229-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57746229
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 57746229
    reference: chr 19
allele count: 8
allele frequency: 6.656017039403621e-5
allele num: 120192
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000469983
  ensembl transcript: ENST00000599062
  gene symbol: AURKC
  hgvsc: ENST00000599062.1:c.576-23T>C
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000469894
  ensembl transcript: ENST00000594599
  gene symbol: AURKC
  hgvsc: ENST00000594599.1:c.69-23T>C
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000302898
  ensembl transcript: ENST00000302804
  gene symbol: AURKC
  hgvsc: ENST00000302804.7:c.585-23T>C
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000406798
  ensembl transcript: ENST00000448930
  gene symbol: AURKC
  hgvsc: ENST00000448930.1:c.483-23T>C
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000470465
  ensembl transcript: ENST00000596375
  gene symbol: AURKC
  hgvsc: ENST00000596375.1:c.*146-23T>C
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000468918
  ensembl transcript: ENST00000601799
  gene symbol: AURKC
  hgvsc: ENST00000601799.1:c.*884-23T>C
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000471830
  ensembl transcript: ENST00000598785
  gene symbol: AURKC
  hgvsc: ENST00000598785.1:c.483-23T>C
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000407162
  ensembl transcript: ENST00000415300
  gene symbol: AURKC
  hgvsc: ENST00000415300.2:c.528-23T>C
  variant of: http://identifiers.org/hgnc/11391
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 871
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 621
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3718
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12800
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1068
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1860
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25687
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7181
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1677
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 595
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2474
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2028
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 870
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 299
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 747
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 394
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 475
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: African
population: East Asian
reference allele: T
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP

19-57746229-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57746229
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 57746229
    reference: chr 19
allele count: 1
allele frequency: 8.320021299254527e-6
allele num: 120192
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000468918
  ensembl transcript: ENST00000601799
  gene symbol: AURKC
  hgvsc: ENST00000601799.1:c.*884-23T>G
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000469894
  ensembl transcript: ENST00000594599
  gene symbol: AURKC
  hgvsc: ENST00000594599.1:c.69-23T>G
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000406798
  ensembl transcript: ENST00000448930
  gene symbol: AURKC
  hgvsc: ENST00000448930.1:c.483-23T>G
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000470465
  ensembl transcript: ENST00000596375
  gene symbol: AURKC
  hgvsc: ENST00000596375.1:c.*146-23T>G
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000469983
  ensembl transcript: ENST00000599062
  gene symbol: AURKC
  hgvsc: ENST00000599062.1:c.576-23T>G
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000302898
  ensembl transcript: ENST00000302804
  gene symbol: AURKC
  hgvsc: ENST00000302804.7:c.585-23T>G
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000407162
  ensembl transcript: ENST00000415300
  gene symbol: AURKC
  hgvsc: ENST00000415300.2:c.528-23T>G
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000471830
  ensembl transcript: ENST00000598785
  gene symbol: AURKC
  hgvsc: ENST00000598785.1:c.483-23T>G
  variant of: http://identifiers.org/hgnc/11391
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7181
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 595
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2474
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1677
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1860
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 621
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25687
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1068
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3718
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 871
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12800
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 354
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24885
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 299
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3408
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 475
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 747
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: Other
population: East Asian
population: African
population: South Asian
reference allele: T
site quality: MQ
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff

19-57746240-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57746240
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 57746240
    reference: chr 19
allele count: 1
allele frequency: 8.285690612312537e-6
allele num: 120690
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000471830
  ensembl transcript: ENST00000598785
  gene symbol: AURKC
  hgvsc: ENST00000598785.1:c.483-12G>T
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000469983
  ensembl transcript: ENST00000599062
  gene symbol: AURKC
  hgvsc: ENST00000599062.1:c.576-12G>T
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000407162
  ensembl transcript: ENST00000415300
  gene symbol: AURKC
  hgvsc: ENST00000415300.2:c.528-12G>T
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000302898
  ensembl transcript: ENST00000302804
  gene symbol: AURKC
  hgvsc: ENST00000302804.7:c.585-12G>T
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000468918
  ensembl transcript: ENST00000601799
  gene symbol: AURKC
  hgvsc: ENST00000601799.1:c.*884-12G>T
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000470465
  ensembl transcript: ENST00000596375
  gene symbol: AURKC
  hgvsc: ENST00000596375.1:c.*146-12G>T
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000406798
  ensembl transcript: ENST00000448930
  gene symbol: AURKC
  hgvsc: ENST00000448930.1:c.483-12G>T
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000469894
  ensembl transcript: ENST00000594599
  gene symbol: AURKC
  hgvsc: ENST00000594599.1:c.69-12G>T
  variant of: http://identifiers.org/hgnc/11391
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 26129
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13676
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7740
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1069
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 708
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2498
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1684
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3785
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1651
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 139
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 157
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7899
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 253
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: South Asian
population: African
population: European (Non-Finnish)
population: Other
population: European (Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD

19-57746263-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57746263
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 57746263
    reference: chr 19
allele count: 1
allele frequency: 8.24783082049421e-6
allele num: 121244
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000407162
  ensembl transcript: ENST00000415300
  gene symbol: AURKC
  hgvsc: ENST00000415300.2:c.539T>C
  hgvsp: ENSP00000407162.1:p.Met180Thr
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000471830
  ensembl transcript: ENST00000598785
  gene symbol: AURKC
  hgvsc: ENST00000598785.1:c.494T>C
  hgvsp: ENSP00000471830.1:p.Met165Thr
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000468918
  ensembl transcript: ENST00000601799
  gene symbol: AURKC
  hgvsc: ENST00000601799.1:c.*895T>C
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000470465
  ensembl transcript: ENST00000596375
  gene symbol: AURKC
  hgvsc: ENST00000596375.1:c.*157T>C
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000302898
  ensembl transcript: ENST00000302804
  gene symbol: AURKC
  hgvsc: ENST00000302804.7:c.596T>C
  hgvsp: ENSP00000302898.6:p.Met199Thr
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000469983
  ensembl transcript: ENST00000599062
  gene symbol: AURKC
  hgvsc: ENST00000599062.1:c.587T>C
  hgvsp: ENSP00000469983.1:p.Met196Thr
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000469894
  ensembl transcript: ENST00000594599
  gene symbol: AURKC
  hgvsc: ENST00000594599.1:c.80T>C
  hgvsp: ENSP00000469894.1:p.Met27Thr
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000406798
  ensembl transcript: ENST00000448930
  gene symbol: AURKC
  hgvsc: ENST00000448930.1:c.494T>C
  hgvsp: ENSP00000406798.1:p.Met165Thr
  variant of: http://identifiers.org/hgnc/11391
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8151
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14316
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26097
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1690
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2515
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3875
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1069
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26945
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3676
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1696
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Met199Thr
num of homozygotes: 0
population: African
population: East Asian
population: Other
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Latino
reference allele: T
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: VQSLOD

19-57746275-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57746275
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 57746275
    reference: chr 19
allele count: 4
allele frequency: 3.297283038776049e-5
allele num: 121312
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000302898
  ensembl transcript: ENST00000302804
  gene symbol: AURKC
  hgvsc: ENST00000302804.7:c.608T>C
  hgvsp: ENSP00000302898.6:p.Leu203Pro
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000469983
  ensembl transcript: ENST00000599062
  gene symbol: AURKC
  hgvsc: ENST00000599062.1:c.599T>C
  hgvsp: ENSP00000469983.1:p.Leu200Pro
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000469894
  ensembl transcript: ENST00000594599
  gene symbol: AURKC
  hgvsc: ENST00000594599.1:c.92T>C
  hgvsp: ENSP00000469894.1:p.Leu31Pro
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000468918
  ensembl transcript: ENST00000601799
  gene symbol: AURKC
  hgvsc: ENST00000601799.1:c.*907T>C
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000471830
  ensembl transcript: ENST00000598785
  gene symbol: AURKC
  hgvsc: ENST00000598785.1:c.506T>C
  hgvsp: ENSP00000471830.1:p.Leu169Pro
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000406798
  ensembl transcript: ENST00000448930
  gene symbol: AURKC
  hgvsc: ENST00000448930.1:c.506T>C
  hgvsp: ENSP00000406798.1:p.Leu169Pro
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000407162
  ensembl transcript: ENST00000415300
  gene symbol: AURKC
  hgvsc: ENST00000415300.2:c.551T>C
  hgvsp: ENSP00000407162.1:p.Leu184Pro
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000470465
  ensembl transcript: ENST00000596375
  gene symbol: AURKC
  hgvsc: ENST00000596375.1:c.*169T>C
  variant of: http://identifiers.org/hgnc/11391
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8251
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3899
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1070
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 620
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14463
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25870
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1687
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2523
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3701
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26817
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8285
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2137
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Leu203Pro
num of homozygotes: 0
population: African
population: Other
population: East Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: T
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: QD

19-57746282-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57746282
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 57746282
    reference: chr 19
allele count: 1
allele frequency: 8.242528148233626e-6
allele num: 121322
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000471830
  ensembl transcript: ENST00000598785
  gene symbol: AURKC
  hgvsc: ENST00000598785.1:c.513C>T
  hgvsp: ENST00000598785.1:c.513C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000407162
  ensembl transcript: ENST00000415300
  gene symbol: AURKC
  hgvsc: ENST00000415300.2:c.558C>T
  hgvsp: ENST00000415300.2:c.558C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000469983
  ensembl transcript: ENST00000599062
  gene symbol: AURKC
  hgvsc: ENST00000599062.1:c.606C>T
  hgvsp: ENST00000599062.1:c.606C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000406798
  ensembl transcript: ENST00000448930
  gene symbol: AURKC
  hgvsc: ENST00000448930.1:c.513C>T
  hgvsp: ENST00000448930.1:c.513C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000469894
  ensembl transcript: ENST00000594599
  gene symbol: AURKC
  hgvsc: ENST00000594599.1:c.99C>T
  hgvsp: ENST00000594599.1:c.99C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000470465
  ensembl transcript: ENST00000596375
  gene symbol: AURKC
  hgvsc: ENST00000596375.1:c.*176C>T
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000468918
  ensembl transcript: ENST00000601799
  gene symbol: AURKC
  hgvsc: ENST00000601799.1:c.*914C>T
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000302898
  ensembl transcript: ENST00000302804
  gene symbol: AURKC
  hgvsc: ENST00000302804.7:c.615C>T
  hgvsp: ENST00000302804.7:c.615C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11391
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 25788
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14519
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8290
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2525
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 590
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1072
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3904
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1687
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8313
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3714
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Tyr205Tyr
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: East Asian
population: Other
population: European (Finnish)
population: South Asian
reference allele: C
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum

19-57746285-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57746285
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 57746285
    reference: chr 19
allele count: 1
allele frequency: 8.241984669908513e-6
allele num: 121330
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000407162
  ensembl transcript: ENST00000415300
  gene symbol: AURKC
  hgvsc: ENST00000415300.2:c.561G>A
  hgvsp: ENST00000415300.2:c.561G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000470465
  ensembl transcript: ENST00000596375
  gene symbol: AURKC
  hgvsc: ENST00000596375.1:c.*179G>A
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000468918
  ensembl transcript: ENST00000601799
  gene symbol: AURKC
  hgvsc: ENST00000601799.1:c.*917G>A
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000302898
  ensembl transcript: ENST00000302804
  gene symbol: AURKC
  hgvsc: ENST00000302804.7:c.618G>A
  hgvsp: ENST00000302804.7:c.618G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000469983
  ensembl transcript: ENST00000599062
  gene symbol: AURKC
  hgvsc: ENST00000599062.1:c.609G>A
  hgvsp: ENST00000599062.1:c.609G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000469894
  ensembl transcript: ENST00000594599
  gene symbol: AURKC
  hgvsc: ENST00000594599.1:c.102G>A
  hgvsp: ENST00000594599.1:c.102G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000471830
  ensembl transcript: ENST00000598785
  gene symbol: AURKC
  hgvsc: ENST00000598785.1:c.516G>A
  hgvsp: ENST00000598785.1:c.516G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000406798
  ensembl transcript: ENST00000448930
  gene symbol: AURKC
  hgvsc: ENST00000448930.1:c.516G>A
  hgvsp: ENST00000448930.1:c.516G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11391
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25751
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14541
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2529
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3909
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8307
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1070
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1691
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4806
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Leu206Leu
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Latino
population: African
population: Other
population: European (Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: ReadPosRankSum

19-57746287-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57746287
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 57746287
    reference: chr 19
allele count: 3
allele frequency: 2.47255464345762e-5
allele num: 121332
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000302898
  ensembl transcript: ENST00000302804
  gene symbol: AURKC
  hgvsc: ENST00000302804.7:c.620C>T
  hgvsp: ENSP00000302898.6:p.Pro207Leu
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000470465
  ensembl transcript: ENST00000596375
  gene symbol: AURKC
  hgvsc: ENST00000596375.1:c.*181C>T
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000469983
  ensembl transcript: ENST00000599062
  gene symbol: AURKC
  hgvsc: ENST00000599062.1:c.611C>T
  hgvsp: ENSP00000469983.1:p.Pro204Leu
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000469894
  ensembl transcript: ENST00000594599
  gene symbol: AURKC
  hgvsc: ENST00000594599.1:c.104C>T
  hgvsp: ENSP00000469894.1:p.Pro35Leu
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000407162
  ensembl transcript: ENST00000415300
  gene symbol: AURKC
  hgvsc: ENST00000415300.2:c.563C>T
  hgvsp: ENSP00000407162.1:p.Pro188Leu
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000406798
  ensembl transcript: ENST00000448930
  gene symbol: AURKC
  hgvsc: ENST00000448930.1:c.518C>T
  hgvsp: ENSP00000406798.1:p.Pro173Leu
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000471830
  ensembl transcript: ENST00000598785
  gene symbol: AURKC
  hgvsc: ENST00000598785.1:c.518C>T
  hgvsp: ENSP00000471830.1:p.Pro173Leu
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000468918
  ensembl transcript: ENST00000601799
  gene symbol: AURKC
  hgvsc: ENST00000601799.1:c.*919C>T
  variant of: http://identifiers.org/hgnc/11391
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1691
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3916
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2533
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1072
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8329
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25692
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14571
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1707
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9274
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26760
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Pro207Leu
num of homozygotes: 0
population: South Asian
population: Other
population: Latino
population: East Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum

19-57746288-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57746288
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 57746288
    reference: chr 19
allele count: 230
allele frequency: 1.895531490547067e-3
allele num: 121338
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000469894
  ensembl transcript: ENST00000594599
  gene symbol: AURKC
  hgvsc: ENST00000594599.1:c.105G>A
  hgvsp: ENST00000594599.1:c.105G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000302898
  ensembl transcript: ENST00000302804
  gene symbol: AURKC
  hgvsc: ENST00000302804.7:c.621G>A
  hgvsp: ENST00000302804.7:c.621G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000469983
  ensembl transcript: ENST00000599062
  gene symbol: AURKC
  hgvsc: ENST00000599062.1:c.612G>A
  hgvsp: ENST00000599062.1:c.612G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000470465
  ensembl transcript: ENST00000596375
  gene symbol: AURKC
  hgvsc: ENST00000596375.1:c.*182G>A
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000471830
  ensembl transcript: ENST00000598785
  gene symbol: AURKC
  hgvsc: ENST00000598785.1:c.519G>A
  hgvsp: ENST00000598785.1:c.519G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000468918
  ensembl transcript: ENST00000601799
  gene symbol: AURKC
  hgvsc: ENST00000601799.1:c.*920G>A
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000407162
  ensembl transcript: ENST00000415300
  gene symbol: AURKC
  hgvsc: ENST00000415300.2:c.564G>A
  hgvsp: ENST00000415300.2:c.564G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000406798
  ensembl transcript: ENST00000448930
  gene symbol: AURKC
  hgvsc: ENST00000448930.1:c.519G>A
  hgvsp: ENST00000448930.1:c.519G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11391
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14555
  bin: 2.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 8.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1091
  bin: 5.25e1
  variant carriers: 26
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 6.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 8341
  bin: 3.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 7.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 1703
  bin: 4.75e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 7.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 9.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3927
  bin: 3.75e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 8.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 665
  bin: 9.75e1
  variant carriers: 51
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2549
  bin: 4.25e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 608
  bin: 5.75e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 6.25e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25535
  bin: 2.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 4792
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9443
  bin: 9.75e1
  variant carriers: 228
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Pro207Pro
num of homozygotes: 2
population: African
population: South Asian
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: Latino
reference allele: G
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum

19-57746295-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57746295
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 57746295
    reference: chr 19
allele count: 1
allele frequency: 8.240218860212928e-6
allele num: 121356
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000469983
  ensembl transcript: ENST00000599062
  gene symbol: AURKC
  hgvsc: ENST00000599062.1:c.619A>G
  hgvsp: ENSP00000469983.1:p.Met207Val
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000471830
  ensembl transcript: ENST00000598785
  gene symbol: AURKC
  hgvsc: ENST00000598785.1:c.526A>G
  hgvsp: ENSP00000471830.1:p.Met176Val
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000407162
  ensembl transcript: ENST00000415300
  gene symbol: AURKC
  hgvsc: ENST00000415300.2:c.571A>G
  hgvsp: ENSP00000407162.1:p.Met191Val
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000302898
  ensembl transcript: ENST00000302804
  gene symbol: AURKC
  hgvsc: ENST00000302804.7:c.628A>G
  hgvsp: ENSP00000302898.6:p.Met210Val
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000469894
  ensembl transcript: ENST00000594599
  gene symbol: AURKC
  hgvsc: ENST00000594599.1:c.112A>G
  hgvsp: ENSP00000469894.1:p.Met38Val
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000406798
  ensembl transcript: ENST00000448930
  gene symbol: AURKC
  hgvsc: ENST00000448930.1:c.526A>G
  hgvsp: ENSP00000406798.1:p.Met176Val
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000470465
  ensembl transcript: ENST00000596375
  gene symbol: AURKC
  hgvsc: ENST00000596375.1:c.*189A>G
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000468918
  ensembl transcript: ENST00000601799
  gene symbol: AURKC
  hgvsc: ENST00000601799.1:c.*927A>G
  variant of: http://identifiers.org/hgnc/11391
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 595
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3945
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14622
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2550
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25496
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 398
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8382
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 621
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1083
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1716
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3733
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Met210Val
num of homozygotes: 0
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: East Asian
population: African
population: South Asian
reference allele: A
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum

19-57746297-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57746297
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 57746297
    reference: chr 19
allele count: 1
allele frequency: 8.240354664864776e-6
allele num: 121354
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000406798
  ensembl transcript: ENST00000448930
  gene symbol: AURKC
  hgvsc: ENST00000448930.1:c.528G>A
  hgvsp: ENSP00000406798.1:p.Met176Ile
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000471830
  ensembl transcript: ENST00000598785
  gene symbol: AURKC
  hgvsc: ENST00000598785.1:c.528G>A
  hgvsp: ENSP00000471830.1:p.Met176Ile
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000302898
  ensembl transcript: ENST00000302804
  gene symbol: AURKC
  hgvsc: ENST00000302804.7:c.630G>A
  hgvsp: ENSP00000302898.6:p.Met210Ile
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000407162
  ensembl transcript: ENST00000415300
  gene symbol: AURKC
  hgvsc: ENST00000415300.2:c.573G>A
  hgvsp: ENSP00000407162.1:p.Met191Ile
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000468918
  ensembl transcript: ENST00000601799
  gene symbol: AURKC
  hgvsc: ENST00000601799.1:c.*929G>A
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000469894
  ensembl transcript: ENST00000594599
  gene symbol: AURKC
  hgvsc: ENST00000594599.1:c.114G>A
  hgvsp: ENSP00000469894.1:p.Met38Ile
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000469983
  ensembl transcript: ENST00000599062
  gene symbol: AURKC
  hgvsc: ENST00000599062.1:c.621G>A
  hgvsp: ENSP00000469983.1:p.Met207Ile
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000470465
  ensembl transcript: ENST00000596375
  gene symbol: AURKC
  hgvsc: ENST00000596375.1:c.*191G>A
  variant of: http://identifiers.org/hgnc/11391
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3945
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14632
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 595
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8394
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1717
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1084
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25466
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2550
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 621
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 398
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4816
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26662
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3712
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Met210Ile
num of homozygotes: 0
population: African
population: Latino
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: G
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: MQ

19-57746299-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57746299
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 57746299
    reference: chr 19
allele count: 1
allele frequency: 8.240218860212928e-6
allele num: 121356
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000470465
  ensembl transcript: ENST00000596375
  gene symbol: AURKC
  hgvsc: ENST00000596375.1:c.*193T>C
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000406798
  ensembl transcript: ENST00000448930
  gene symbol: AURKC
  hgvsc: ENST00000448930.1:c.530T>C
  hgvsp: ENSP00000406798.1:p.Ile177Thr
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000469894
  ensembl transcript: ENST00000594599
  gene symbol: AURKC
  hgvsc: ENST00000594599.1:c.116T>C
  hgvsp: ENSP00000469894.1:p.Ile39Thr
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000469983
  ensembl transcript: ENST00000599062
  gene symbol: AURKC
  hgvsc: ENST00000599062.1:c.623T>C
  hgvsp: ENSP00000469983.1:p.Ile208Thr
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000302898
  ensembl transcript: ENST00000302804
  gene symbol: AURKC
  hgvsc: ENST00000302804.7:c.632T>C
  hgvsp: ENSP00000302898.6:p.Ile211Thr
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000407162
  ensembl transcript: ENST00000415300
  gene symbol: AURKC
  hgvsc: ENST00000415300.2:c.575T>C
  hgvsp: ENSP00000407162.1:p.Ile192Thr
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000471830
  ensembl transcript: ENST00000598785
  gene symbol: AURKC
  hgvsc: ENST00000598785.1:c.530T>C
  hgvsp: ENSP00000471830.1:p.Ile177Thr
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000468918
  ensembl transcript: ENST00000601799
  gene symbol: AURKC
  hgvsc: ENST00000601799.1:c.*931T>C
  variant of: http://identifiers.org/hgnc/11391
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3946
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1715
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 595
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2553
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14643
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1084
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8393
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 398
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25458
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3736
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3710
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Ile211Thr
num of homozygotes: 0
population: African
population: Other
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
reference allele: T
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD

19-57746305-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57746305
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 57746305
    reference: chr 19
allele count: 1
allele frequency: 8.239675686364985e-6
allele num: 121364
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000471830
  ensembl transcript: ENST00000598785
  gene symbol: AURKC
  hgvsc: ENST00000598785.1:c.536G>A
  hgvsp: ENSP00000471830.1:p.Gly179Glu
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000469983
  ensembl transcript: ENST00000599062
  gene symbol: AURKC
  hgvsc: ENST00000599062.1:c.629G>A
  hgvsp: ENSP00000469983.1:p.Gly210Glu
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000468918
  ensembl transcript: ENST00000601799
  gene symbol: AURKC
  hgvsc: ENST00000601799.1:c.*937G>A
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000407162
  ensembl transcript: ENST00000415300
  gene symbol: AURKC
  hgvsc: ENST00000415300.2:c.581G>A
  hgvsp: ENSP00000407162.1:p.Gly194Glu
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000469894
  ensembl transcript: ENST00000594599
  gene symbol: AURKC
  hgvsc: ENST00000594599.1:c.122G>A
  hgvsp: ENSP00000469894.1:p.Gly41Glu
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000470465
  ensembl transcript: ENST00000596375
  gene symbol: AURKC
  hgvsc: ENST00000596375.1:c.*199G>A
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000302898
  ensembl transcript: ENST00000302804
  gene symbol: AURKC
  hgvsc: ENST00000302804.7:c.638G>A
  hgvsp: ENSP00000302898.6:p.Gly213Glu
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000406798
  ensembl transcript: ENST00000448930
  gene symbol: AURKC
  hgvsc: ENST00000448930.1:c.536G>A
  hgvsp: ENSP00000406798.1:p.Gly179Glu
  variant of: http://identifiers.org/hgnc/11391
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1720
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25354
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 596
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14698
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 398
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3962
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2557
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8417
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 621
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1084
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2155
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1714
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Gly213Glu
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: East Asian
population: Other
reference allele: G
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum

19-57746312-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57746312
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 57746312
    reference: chr 19
allele count: 1
allele frequency: 8.239132584121543e-6
allele num: 121372
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000407162
  ensembl transcript: ENST00000415300
  gene symbol: AURKC
  hgvsc: ENST00000415300.2:c.588A>G
  hgvsp: ENST00000415300.2:c.588A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000471830
  ensembl transcript: ENST00000598785
  gene symbol: AURKC
  hgvsc: ENST00000598785.1:c.543A>G
  hgvsp: ENST00000598785.1:c.543A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000469894
  ensembl transcript: ENST00000594599
  gene symbol: AURKC
  hgvsc: ENST00000594599.1:c.129A>G
  hgvsp: ENST00000594599.1:c.129A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000406798
  ensembl transcript: ENST00000448930
  gene symbol: AURKC
  hgvsc: ENST00000448930.1:c.543A>G
  hgvsp: ENST00000448930.1:c.543A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000468918
  ensembl transcript: ENST00000601799
  gene symbol: AURKC
  hgvsc: ENST00000601799.1:c.*944A>G
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000469983
  ensembl transcript: ENST00000599062
  gene symbol: AURKC
  hgvsc: ENST00000599062.1:c.636A>G
  hgvsp: ENST00000599062.1:c.636A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000302898
  ensembl transcript: ENST00000302804
  gene symbol: AURKC
  hgvsc: ENST00000302804.7:c.645A>G
  hgvsp: ENST00000302804.7:c.645A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000470465
  ensembl transcript: ENST00000596375
  gene symbol: AURKC
  hgvsc: ENST00000596375.1:c.*206A>G
  variant of: http://identifiers.org/hgnc/11391
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1718
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 597
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25270
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14732
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8461
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 621
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2562
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3966
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 398
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1083
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1714
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Thr215Thr
num of homozygotes: 0
population: Other
population: East Asian
population: Latino
population: African
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: A
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff

19-57746315-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57746315
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 57746315
    reference: chr 19
allele count: 1
allele frequency: 8.239132584121543e-6
allele num: 121372
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000407162
  ensembl transcript: ENST00000415300
  gene symbol: AURKC
  hgvsc: ENST00000415300.2:c.591T>G
  hgvsp: ENSP00000407162.1:p.Tyr197Ter
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000406798
  ensembl transcript: ENST00000448930
  gene symbol: AURKC
  hgvsc: ENST00000448930.1:c.546T>G
  hgvsp: ENSP00000406798.1:p.Tyr182Ter
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000470465
  ensembl transcript: ENST00000596375
  gene symbol: AURKC
  hgvsc: ENST00000596375.1:c.*209T>G
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000468918
  ensembl transcript: ENST00000601799
  gene symbol: AURKC
  hgvsc: ENST00000601799.1:c.*947T>G
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000469894
  ensembl transcript: ENST00000594599
  gene symbol: AURKC
  hgvsc: ENST00000594599.1:c.132T>G
  hgvsp: ENSP00000469894.1:p.Tyr44Ter
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000302898
  ensembl transcript: ENST00000302804
  gene symbol: AURKC
  hgvsc: ENST00000302804.7:c.648T>G
  hgvsp: ENSP00000302898.6:p.Tyr216Ter
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000469983
  ensembl transcript: ENST00000599062
  gene symbol: AURKC
  hgvsc: ENST00000599062.1:c.639T>G
  hgvsp: ENSP00000469983.1:p.Tyr213Ter
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000471830
  ensembl transcript: ENST00000598785
  gene symbol: AURKC
  hgvsc: ENST00000598785.1:c.546T>G
  hgvsp: ENSP00000471830.1:p.Tyr182Ter
  variant of: http://identifiers.org/hgnc/11391
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1083
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 398
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8470
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25246
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1719
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14741
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 597
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 621
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2563
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3970
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8380
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9338
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Tyr216Ter
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: African
population: Other
population: Latino
population: European (Non-Finnish)
population: East Asian
reference allele: T
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD

19-57746324-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57746324
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 57746324
    reference: chr 19
allele count: 1
allele frequency: 8.2387253044209e-6
allele num: 121378
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000471830
  ensembl transcript: ENST00000598785
  gene symbol: AURKC
  hgvsc: ENST00000598785.1:c.555G>C
  hgvsp: ENSP00000471830.1:p.Lys185Asn
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000469983
  ensembl transcript: ENST00000599062
  gene symbol: AURKC
  hgvsc: ENST00000599062.1:c.648G>C
  hgvsp: ENSP00000469983.1:p.Lys216Asn
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000407162
  ensembl transcript: ENST00000415300
  gene symbol: AURKC
  hgvsc: ENST00000415300.2:c.600G>C
  hgvsp: ENSP00000407162.1:p.Lys200Asn
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000469894
  ensembl transcript: ENST00000594599
  gene symbol: AURKC
  hgvsc: ENST00000594599.1:c.141G>C
  hgvsp: ENSP00000469894.1:p.Lys47Asn
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000468918
  ensembl transcript: ENST00000601799
  gene symbol: AURKC
  hgvsc: ENST00000601799.1:c.*956G>C
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000406798
  ensembl transcript: ENST00000448930
  gene symbol: AURKC
  hgvsc: ENST00000448930.1:c.555G>C
  hgvsp: ENSP00000406798.1:p.Lys185Asn
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000302898
  ensembl transcript: ENST00000302804
  gene symbol: AURKC
  hgvsc: ENST00000302804.7:c.657G>C
  hgvsp: ENSP00000302898.6:p.Lys219Asn
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000470465
  ensembl transcript: ENST00000596375
  gene symbol: AURKC
  hgvsc: ENST00000596375.1:c.*218G>C
  variant of: http://identifiers.org/hgnc/11391
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14801
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8496
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25134
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1720
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2572
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3987
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 398
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 597
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 621
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1084
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1717
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8406
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Lys219Asn
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Latino
population: East Asian
population: African
population: Other
reference allele: G
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD

19-57746333-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57746333
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 57746333
    reference: chr 19
allele count: 1
allele frequency: 8.238046594391538e-6
allele num: 121388
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000471830
  ensembl transcript: ENST00000598785
  gene symbol: AURKC
  hgvsc: ENST00000598785.1:c.564G>A
  hgvsp: ENST00000598785.1:c.564G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000469894
  ensembl transcript: ENST00000594599
  gene symbol: AURKC
  hgvsc: ENST00000594599.1:c.150G>A
  hgvsp: ENST00000594599.1:c.150G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000470465
  ensembl transcript: ENST00000596375
  gene symbol: AURKC
  hgvsc: ENST00000596375.1:c.*227G>A
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000407162
  ensembl transcript: ENST00000415300
  gene symbol: AURKC
  hgvsc: ENST00000415300.2:c.609G>A
  hgvsp: ENST00000415300.2:c.609G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000406798
  ensembl transcript: ENST00000448930
  gene symbol: AURKC
  hgvsc: ENST00000448930.1:c.564G>A
  hgvsp: ENST00000448930.1:c.564G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000469983
  ensembl transcript: ENST00000599062
  gene symbol: AURKC
  hgvsc: ENST00000599062.1:c.657G>A
  hgvsp: ENST00000599062.1:c.657G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000302898
  ensembl transcript: ENST00000302804
  gene symbol: AURKC
  hgvsc: ENST00000302804.7:c.666G>A
  hgvsp: ENST00000302804.7:c.666G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000468918
  ensembl transcript: ENST00000601799
  gene symbol: AURKC
  hgvsc: ENST00000601799.1:c.*965G>A
  variant of: http://identifiers.org/hgnc/11391
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25027
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2577
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8540
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1083
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3997
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14868
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 598
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1719
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 398
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2158
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8424
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3742
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3732
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26547
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Leu222Leu
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
population: Other
reference allele: G
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: QD

19-57746342-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57746342
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 57746342
    reference: chr 19
allele count: 16
allele frequency: 1.318022307527555e-4
allele num: 121394
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000407162
  ensembl transcript: ENST00000415300
  gene symbol: AURKC
  hgvsc: ENST00000415300.2:c.618T>C
  hgvsp: ENST00000415300.2:c.618T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000469983
  ensembl transcript: ENST00000599062
  gene symbol: AURKC
  hgvsc: ENST00000599062.1:c.666T>C
  hgvsp: ENST00000599062.1:c.666T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000406798
  ensembl transcript: ENST00000448930
  gene symbol: AURKC
  hgvsc: ENST00000448930.1:c.573T>C
  hgvsp: ENST00000448930.1:c.573T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000471830
  ensembl transcript: ENST00000598785
  gene symbol: AURKC
  hgvsc: ENST00000598785.1:c.573T>C
  hgvsp: ENST00000598785.1:c.573T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000302898
  ensembl transcript: ENST00000302804
  gene symbol: AURKC
  hgvsc: ENST00000302804.7:c.675T>C
  hgvsp: ENST00000302804.7:c.675T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000469894
  ensembl transcript: ENST00000594599
  gene symbol: AURKC
  hgvsc: ENST00000594599.1:c.159T>C
  hgvsp: ENST00000594599.1:c.159T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000468918
  ensembl transcript: ENST00000601799
  gene symbol: AURKC
  hgvsc: ENST00000601799.1:c.*974T>C
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000470465
  ensembl transcript: ENST00000596375
  gene symbol: AURKC
  hgvsc: ENST00000596375.1:c.*236T>C
  variant of: http://identifiers.org/hgnc/11391
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 624
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 598
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 398
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2580
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8576
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14916
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 7.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 24942
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4003
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1724
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1085
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26564
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4841
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Ile225Ile
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: East Asian
population: African
population: European (Finnish)
population: Other
population: South Asian
reference allele: T
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum

19-57746348-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57746348
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 57746348
    reference: chr 19
allele count: 1
allele frequency: 8.237503706876667e-6
allele num: 121396
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000406798
  ensembl transcript: ENST00000448930
  gene symbol: AURKC
  hgvsc: ENST00000448930.1:c.579G>A
  hgvsp: ENST00000448930.1:c.579G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000469894
  ensembl transcript: ENST00000594599
  gene symbol: AURKC
  hgvsc: ENST00000594599.1:c.165G>A
  hgvsp: ENST00000594599.1:c.165G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000469983
  ensembl transcript: ENST00000599062
  gene symbol: AURKC
  hgvsc: ENST00000599062.1:c.672G>A
  hgvsp: ENST00000599062.1:c.672G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000471830
  ensembl transcript: ENST00000598785
  gene symbol: AURKC
  hgvsc: ENST00000598785.1:c.579G>A
  hgvsp: ENST00000598785.1:c.579G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000302898
  ensembl transcript: ENST00000302804
  gene symbol: AURKC
  hgvsc: ENST00000302804.7:c.681G>A
  hgvsp: ENST00000302804.7:c.681G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000407162
  ensembl transcript: ENST00000415300
  gene symbol: AURKC
  hgvsc: ENST00000415300.2:c.624G>A
  hgvsp: ENST00000415300.2:c.624G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000470465
  ensembl transcript: ENST00000596375
  gene symbol: AURKC
  hgvsc: ENST00000596375.1:c.*242G>A
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000468918
  ensembl transcript: ENST00000601799
  gene symbol: AURKC
  hgvsc: ENST00000601799.1:c.*980G>A
  variant of: http://identifiers.org/hgnc/11391
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14950
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24910
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2581
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8591
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4010
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 621
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1721
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 597
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1086
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26578
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Val227Val
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: African
population: Other
population: East Asian
population: South Asian
reference allele: G
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: DP

19-57746356-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57746356
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 57746356
    reference: chr 19
allele count: 1
allele frequency: 8.237639422047218e-6
allele num: 121394
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000469894
  ensembl transcript: ENST00000594599
  gene symbol: AURKC
  hgvsc: ENST00000594599.1:c.173A>G
  hgvsp: ENSP00000469894.1:p.Tyr58Cys
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000302898
  ensembl transcript: ENST00000302804
  gene symbol: AURKC
  hgvsc: ENST00000302804.7:c.689A>G
  hgvsp: ENSP00000302898.6:p.Tyr230Cys
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000471830
  ensembl transcript: ENST00000598785
  gene symbol: AURKC
  hgvsc: ENST00000598785.1:c.587A>G
  hgvsp: ENSP00000471830.1:p.Tyr196Cys
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000469983
  ensembl transcript: ENST00000599062
  gene symbol: AURKC
  hgvsc: ENST00000599062.1:c.680A>G
  hgvsp: ENSP00000469983.1:p.Tyr227Cys
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000470465
  ensembl transcript: ENST00000596375
  gene symbol: AURKC
  hgvsc: ENST00000596375.1:c.*250A>G
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000406798
  ensembl transcript: ENST00000448930
  gene symbol: AURKC
  hgvsc: ENST00000448930.1:c.587A>G
  hgvsp: ENSP00000406798.1:p.Tyr196Cys
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000468918
  ensembl transcript: ENST00000601799
  gene symbol: AURKC
  hgvsc: ENST00000601799.1:c.*988A>G
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000407162
  ensembl transcript: ENST00000415300
  gene symbol: AURKC
  hgvsc: ENST00000415300.2:c.632A>G
  hgvsp: ENSP00000407162.1:p.Tyr211Cys
  variant of: http://identifiers.org/hgnc/11391
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4012
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1721
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2581
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14975
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 598
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8601
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24877
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 621
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1086
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26591
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Tyr230Cys
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: African
population: Latino
population: Other
reference allele: A
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: ClippingRankSum

19-57746369-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57746369
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 57746369
    reference: chr 19
allele count: 1
allele frequency: 8.236825198095647e-6
allele num: 121406
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000407162
  ensembl transcript: ENST00000415300
  gene symbol: AURKC
  hgvsc: ENST00000415300.2:c.645G>A
  hgvsp: ENST00000415300.2:c.645G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000471830
  ensembl transcript: ENST00000598785
  gene symbol: AURKC
  hgvsc: ENST00000598785.1:c.600G>A
  hgvsp: ENST00000598785.1:c.600G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000468918
  ensembl transcript: ENST00000601799
  gene symbol: AURKC
  hgvsc: ENST00000601799.1:c.*1001G>A
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000406798
  ensembl transcript: ENST00000448930
  gene symbol: AURKC
  hgvsc: ENST00000448930.1:c.600G>A
  hgvsp: ENST00000448930.1:c.600G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000302898
  ensembl transcript: ENST00000302804
  gene symbol: AURKC
  hgvsc: ENST00000302804.7:c.702G>A
  hgvsp: ENST00000302804.7:c.702G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000470465
  ensembl transcript: ENST00000596375
  gene symbol: AURKC
  hgvsc: ENST00000596375.1:c.*263G>A
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000469983
  ensembl transcript: ENST00000599062
  gene symbol: AURKC
  hgvsc: ENST00000599062.1:c.693G>A
  hgvsp: ENST00000599062.1:c.693G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000469894
  ensembl transcript: ENST00000594599
  gene symbol: AURKC
  hgvsc: ENST00000594599.1:c.186G>A
  hgvsp: ENST00000594599.1:c.186G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/11391
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1086
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 598
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4011
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1722
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24854
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2585
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8599
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15007
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8460
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3758
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Val234Val
num of homozygotes: 0
population: East Asian
population: African
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Latino
reference allele: G
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum

19-57746370-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57746370
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 57746370
    reference: chr 19
allele count: 1
allele frequency: 8.236960890909689e-6
allele num: 121404
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000469983
  ensembl transcript: ENST00000599062
  gene symbol: AURKC
  hgvsc: ENST00000599062.1:c.694G>A
  hgvsp: ENSP00000469983.1:p.Gly232Arg
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000302898
  ensembl transcript: ENST00000302804
  gene symbol: AURKC
  hgvsc: ENST00000302804.7:c.703G>A
  hgvsp: ENSP00000302898.6:p.Gly235Arg
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000469894
  ensembl transcript: ENST00000594599
  gene symbol: AURKC
  hgvsc: ENST00000594599.1:c.187G>A
  hgvsp: ENSP00000469894.1:p.Gly63Arg
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000407162
  ensembl transcript: ENST00000415300
  gene symbol: AURKC
  hgvsc: ENST00000415300.2:c.646G>A
  hgvsp: ENSP00000407162.1:p.Gly216Arg
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000471830
  ensembl transcript: ENST00000598785
  gene symbol: AURKC
  hgvsc: ENST00000598785.1:c.601G>A
  hgvsp: ENSP00000471830.1:p.Gly201Arg
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000406798
  ensembl transcript: ENST00000448930
  gene symbol: AURKC
  hgvsc: ENST00000448930.1:c.601G>A
  hgvsp: ENSP00000406798.1:p.Gly201Arg
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000470465
  ensembl transcript: ENST00000596375
  gene symbol: AURKC
  hgvsc: ENST00000596375.1:c.*264G>A
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000468918
  ensembl transcript: ENST00000601799
  gene symbol: AURKC
  hgvsc: ENST00000601799.1:c.*1002G>A
  variant of: http://identifiers.org/hgnc/11391
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24849
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 597
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8603
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15006
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1086
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2588
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 621
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4014
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 399
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1722
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8459
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26594
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Gly235Arg
num of homozygotes: 0
population: African
population: East Asian
population: Other
population: South Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: MQ

19-57746371-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57746371
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 57746371
    reference: chr 19
allele count: 1
allele frequency: 8.236825198095647e-6
allele num: 121406
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000471830
  ensembl transcript: ENST00000598785
  gene symbol: AURKC
  hgvsc: ENST00000598785.1:c.602G>T
  hgvsp: ENSP00000471830.1:p.Gly201Val
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000406798
  ensembl transcript: ENST00000448930
  gene symbol: AURKC
  hgvsc: ENST00000448930.1:c.602G>T
  hgvsp: ENSP00000406798.1:p.Gly201Val
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000407162
  ensembl transcript: ENST00000415300
  gene symbol: AURKC
  hgvsc: ENST00000415300.2:c.647G>T
  hgvsp: ENSP00000407162.1:p.Gly216Val
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000469983
  ensembl transcript: ENST00000599062
  gene symbol: AURKC
  hgvsc: ENST00000599062.1:c.695G>T
  hgvsp: ENSP00000469983.1:p.Gly232Val
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000469894
  ensembl transcript: ENST00000594599
  gene symbol: AURKC
  hgvsc: ENST00000594599.1:c.188G>T
  hgvsp: ENSP00000469894.1:p.Gly63Val
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000470465
  ensembl transcript: ENST00000596375
  gene symbol: AURKC
  hgvsc: ENST00000596375.1:c.*265G>T
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000302898
  ensembl transcript: ENST00000302804
  gene symbol: AURKC
  hgvsc: ENST00000302804.7:c.704G>T
  hgvsp: ENSP00000302898.6:p.Gly235Val
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000468918
  ensembl transcript: ENST00000601799
  gene symbol: AURKC
  hgvsc: ENST00000601799.1:c.*1003G>T
  variant of: http://identifiers.org/hgnc/11391
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 399
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 621
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24850
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1086
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15004
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4014
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1722
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 598
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2586
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8604
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4853
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3759
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Gly235Val
num of homozygotes: 0
population: African
population: South Asian
population: Other
population: European (Non-Finnish)
population: East Asian
population: Latino
population: European (Finnish)
reference allele: G
site quality: MQ
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP

19-57746376-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57746376
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 57746376
    reference: chr 19
allele count: 1
allele frequency: 8.236825198095647e-6
allele num: 121406
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000470465
  ensembl transcript: ENST00000596375
  gene symbol: AURKC
  hgvsc: ENST00000596375.1:c.*270C>T
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000407162
  ensembl transcript: ENST00000415300
  gene symbol: AURKC
  hgvsc: ENST00000415300.2:c.652C>T
  hgvsp: ENSP00000407162.1:p.Pro218Ser
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000471830
  ensembl transcript: ENST00000598785
  gene symbol: AURKC
  hgvsc: ENST00000598785.1:c.607C>T
  hgvsp: ENSP00000471830.1:p.Pro203Ser
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000302898
  ensembl transcript: ENST00000302804
  gene symbol: AURKC
  hgvsc: ENST00000302804.7:c.709C>T
  hgvsp: ENSP00000302898.6:p.Pro237Ser
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000469983
  ensembl transcript: ENST00000599062
  gene symbol: AURKC
  hgvsc: ENST00000599062.1:c.700C>T
  hgvsp: ENSP00000469983.1:p.Pro234Ser
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000469894
  ensembl transcript: ENST00000594599
  gene symbol: AURKC
  hgvsc: ENST00000594599.1:c.193C>T
  hgvsp: ENSP00000469894.1:p.Pro65Ser
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000406798
  ensembl transcript: ENST00000448930
  gene symbol: AURKC
  hgvsc: ENST00000448930.1:c.607C>T
  hgvsp: ENSP00000406798.1:p.Pro203Ser
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000468918
  ensembl transcript: ENST00000601799
  gene symbol: AURKC
  hgvsc: ENST00000601799.1:c.*1008C>T
  variant of: http://identifiers.org/hgnc/11391
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1721
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 597
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 621
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4015
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8606
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2586
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15010
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 399
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24840
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1086
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9351
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3760
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Pro237Ser
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum

19-57746390-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57746390
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 57746390
    reference: chr 19
allele count: 1
allele frequency: 8.236689509752241e-6
allele num: 121408
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000302898
  ensembl transcript: ENST00000302804
  gene symbol: AURKC
  hgvsc: ENST00000302804.7:c.723C>T
  hgvsp: ENST00000302804.7:c.723C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000470465
  ensembl transcript: ENST00000596375
  gene symbol: AURKC
  hgvsc: ENST00000596375.1:c.*284C>T
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000469894
  ensembl transcript: ENST00000594599
  gene symbol: AURKC
  hgvsc: ENST00000594599.1:c.207C>T
  hgvsp: ENST00000594599.1:c.207C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000468918
  ensembl transcript: ENST00000601799
  gene symbol: AURKC
  hgvsc: ENST00000601799.1:c.*1022C>T
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000406798
  ensembl transcript: ENST00000448930
  gene symbol: AURKC
  hgvsc: ENST00000448930.1:c.621C>T
  hgvsp: ENST00000448930.1:c.621C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000407162
  ensembl transcript: ENST00000415300
  gene symbol: AURKC
  hgvsc: ENST00000415300.2:c.666C>T
  hgvsp: ENST00000415300.2:c.666C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000471830
  ensembl transcript: ENST00000598785
  gene symbol: AURKC
  hgvsc: ENST00000598785.1:c.621C>T
  hgvsp: ENST00000598785.1:c.621C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000469983
  ensembl transcript: ENST00000599062
  gene symbol: AURKC
  hgvsc: ENST00000599062.1:c.714C>T
  hgvsp: ENST00000599062.1:c.714C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11391
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 597
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8606
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15016
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4015
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1721
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24821
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1085
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2588
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3760
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2161
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Ser241Ser
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: VQSLOD

19-57746391-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57746391
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 57746391
    reference: chr 19
allele count: 5
allele frequency: 4.118480445454845e-5
allele num: 121404
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000470465
  ensembl transcript: ENST00000596375
  gene symbol: AURKC
  hgvsc: ENST00000596375.1:c.*285G>A
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000469894
  ensembl transcript: ENST00000594599
  gene symbol: AURKC
  hgvsc: ENST00000594599.1:c.208G>A
  hgvsp: ENSP00000469894.1:p.Ala70Thr
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000407162
  ensembl transcript: ENST00000415300
  gene symbol: AURKC
  hgvsc: ENST00000415300.2:c.667G>A
  hgvsp: ENSP00000407162.1:p.Ala223Thr
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000406798
  ensembl transcript: ENST00000448930
  gene symbol: AURKC
  hgvsc: ENST00000448930.1:c.622G>A
  hgvsp: ENSP00000406798.1:p.Ala208Thr
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000471830
  ensembl transcript: ENST00000598785
  gene symbol: AURKC
  hgvsc: ENST00000598785.1:c.622G>A
  hgvsp: ENSP00000471830.1:p.Ala208Thr
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000469983
  ensembl transcript: ENST00000599062
  gene symbol: AURKC
  hgvsc: ENST00000599062.1:c.715G>A
  hgvsp: ENSP00000469983.1:p.Ala239Thr
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000468918
  ensembl transcript: ENST00000601799
  gene symbol: AURKC
  hgvsc: ENST00000601799.1:c.*1023G>A
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000302898
  ensembl transcript: ENST00000302804
  gene symbol: AURKC
  hgvsc: ENST00000302804.7:c.724G>A
  hgvsp: ENSP00000302898.6:p.Ala242Thr
  variant of: http://identifiers.org/hgnc/11391
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2586
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1085
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1723
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8605
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 598
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15019
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24812
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 625
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4016
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8461
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1720
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Ala242Thr
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: African
population: South Asian
population: East Asian
reference allele: G
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum

19-57746397-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57746397
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 57746397
    reference: chr 19
allele count: 1
allele frequency: 8.236689509752241e-6
allele num: 121408
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000469894
  ensembl transcript: ENST00000594599
  gene symbol: AURKC
  hgvsc: ENST00000594599.1:c.214C>T
  hgvsp: ENSP00000469894.1:p.His72Tyr
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000302898
  ensembl transcript: ENST00000302804
  gene symbol: AURKC
  hgvsc: ENST00000302804.7:c.730C>T
  hgvsp: ENSP00000302898.6:p.His244Tyr
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000468918
  ensembl transcript: ENST00000601799
  gene symbol: AURKC
  hgvsc: ENST00000601799.1:c.*1029C>T
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000470465
  ensembl transcript: ENST00000596375
  gene symbol: AURKC
  hgvsc: ENST00000596375.1:c.*291C>T
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000469983
  ensembl transcript: ENST00000599062
  gene symbol: AURKC
  hgvsc: ENST00000599062.1:c.721C>T
  hgvsp: ENSP00000469983.1:p.His241Tyr
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000471830
  ensembl transcript: ENST00000598785
  gene symbol: AURKC
  hgvsc: ENST00000598785.1:c.628C>T
  hgvsp: ENSP00000471830.1:p.His210Tyr
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000406798
  ensembl transcript: ENST00000448930
  gene symbol: AURKC
  hgvsc: ENST00000448930.1:c.628C>T
  hgvsp: ENSP00000406798.1:p.His210Tyr
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000407162
  ensembl transcript: ENST00000415300
  gene symbol: AURKC
  hgvsc: ENST00000415300.2:c.673C>T
  hgvsp: ENSP00000407162.1:p.His225Tyr
  variant of: http://identifiers.org/hgnc/11391
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1723
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4012
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15015
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1086
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2586
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 621
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8610
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24821
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4856
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3764
  bin: 7.25e1
  variant carriers: 0
hgvs: p.His244Tyr
num of homozygotes: 0
population: East Asian
population: South Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: Latino
reference allele: C
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD

19-57746399-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57746399
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 57746399
    reference: chr 19
allele count: 2
allele frequency: 1.647392178181938e-5
allele num: 121404
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000407162
  ensembl transcript: ENST00000415300
  gene symbol: AURKC
  hgvsc: ENST00000415300.2:c.675C>T
  hgvsp: ENST00000415300.2:c.675C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000406798
  ensembl transcript: ENST00000448930
  gene symbol: AURKC
  hgvsc: ENST00000448930.1:c.630C>T
  hgvsp: ENST00000448930.1:c.630C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000471830
  ensembl transcript: ENST00000598785
  gene symbol: AURKC
  hgvsc: ENST00000598785.1:c.630C>T
  hgvsp: ENST00000598785.1:c.630C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000469894
  ensembl transcript: ENST00000594599
  gene symbol: AURKC
  hgvsc: ENST00000594599.1:c.216C>T
  hgvsp: ENST00000594599.1:c.216C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000302898
  ensembl transcript: ENST00000302804
  gene symbol: AURKC
  hgvsc: ENST00000302804.7:c.732C>T
  hgvsp: ENST00000302804.7:c.732C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000469983
  ensembl transcript: ENST00000599062
  gene symbol: AURKC
  hgvsc: ENST00000599062.1:c.723C>T
  hgvsp: ENST00000599062.1:c.723C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000470465
  ensembl transcript: ENST00000596375
  gene symbol: AURKC
  hgvsc: ENST00000596375.1:c.*293C>T
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000468918
  ensembl transcript: ENST00000601799
  gene symbol: AURKC
  hgvsc: ENST00000601799.1:c.*1031C>T
  variant of: http://identifiers.org/hgnc/11391
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4014
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24816
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1087
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8610
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 621
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15020
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2587
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1721
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 598
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3739
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1720
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3766
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8468
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.25e1
  variant carriers: 0
hgvs: p.His244His
num of homozygotes: 0
population: Other
population: Latino
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff

19-57746409-T-TA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57746409
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 57746410
    reference: chr 19
allele count: 1
allele frequency: 8.236960890909689e-6
allele num: 121404
alternate allele: TA
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: stop_gained
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000471830
  ensembl transcript: ENST00000598785
  gene symbol: AURKC
  hgvsc: ENST00000598785.1:c.641dupA
  hgvsp: ENSP00000471830.1:p.Tyr214Ter
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  consequence: stop_gained
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000302898
  ensembl transcript: ENST00000302804
  gene symbol: AURKC
  hgvsc: ENST00000302804.7:c.743dupA
  hgvsp: ENSP00000302898.6:p.Tyr248Ter
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000468918
  ensembl transcript: ENST00000601799
  gene symbol: AURKC
  hgvsc: ENST00000601799.1:c.*1042dupA
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000470465
  ensembl transcript: ENST00000596375
  gene symbol: AURKC
  hgvsc: ENST00000596375.1:c.*304dupA
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: stop_gained
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000407162
  ensembl transcript: ENST00000415300
  gene symbol: AURKC
  hgvsc: ENST00000415300.2:c.686dupA
  hgvsp: ENSP00000407162.1:p.Tyr229Ter
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: stop_gained
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000469894
  ensembl transcript: ENST00000594599
  gene symbol: AURKC
  hgvsc: ENST00000594599.1:c.227dupA
  hgvsp: ENSP00000469894.1:p.Tyr76Ter
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: stop_gained
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000469983
  ensembl transcript: ENST00000599062
  gene symbol: AURKC
  hgvsc: ENST00000599062.1:c.734dupA
  hgvsp: ENSP00000469983.1:p.Tyr245Ter
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: stop_gained
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000406798
  ensembl transcript: ENST00000448930
  gene symbol: AURKC
  hgvsc: ENST00000448930.1:c.641dupA
  hgvsp: ENSP00000406798.1:p.Tyr214Ter
  variant of: http://identifiers.org/hgnc/11391
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 621
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2588
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15021
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 598
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4011
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24801
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8610
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1722
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1086
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26551
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3737
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Tyr248Ter
num of homozygotes: 0
population: European (Finnish)
population: Other
population: East Asian
population: South Asian
population: African
population: Latino
population: European (Non-Finnish)
reference allele: T
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP

19-57746411-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57746411
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 57746411
    reference: chr 19
allele count: 52
allele frequency: 4.283219663273039e-4
allele num: 121404
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000471830
  ensembl transcript: ENST00000598785
  gene symbol: AURKC
  hgvsc: ENST00000598785.1:c.642C>G
  hgvsp: ENSP00000471830.1:p.Tyr214Ter
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000469983
  ensembl transcript: ENST00000599062
  gene symbol: AURKC
  hgvsc: ENST00000599062.1:c.735C>G
  hgvsp: ENSP00000469983.1:p.Tyr245Ter
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000470465
  ensembl transcript: ENST00000596375
  gene symbol: AURKC
  hgvsc: ENST00000596375.1:c.*305C>G
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000468918
  ensembl transcript: ENST00000601799
  gene symbol: AURKC
  hgvsc: ENST00000601799.1:c.*1043C>G
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000469894
  ensembl transcript: ENST00000594599
  gene symbol: AURKC
  hgvsc: ENST00000594599.1:c.228C>G
  hgvsp: ENSP00000469894.1:p.Tyr76Ter
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000407162
  ensembl transcript: ENST00000415300
  gene symbol: AURKC
  hgvsc: ENST00000415300.2:c.687C>G
  hgvsp: ENSP00000407162.1:p.Tyr229Ter
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000302898
  ensembl transcript: ENST00000302804
  gene symbol: AURKC
  hgvsc: ENST00000302804.7:c.744C>G
  hgvsp: ENSP00000302898.6:p.Tyr248Ter
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000406798
  ensembl transcript: ENST00000448930
  gene symbol: AURKC
  hgvsc: ENST00000448930.1:c.642C>G
  hgvsp: ENSP00000406798.1:p.Tyr214Ter
  variant of: http://identifiers.org/hgnc/11391
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 6.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 629
  bin: 9.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2591
  bin: 4.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1089
  bin: 5.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 15005
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8603
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24776
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 7.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 1725
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 6.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4013
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 5.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 1713
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3732
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Tyr248Ter
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
population: Other
population: East Asian
reference allele: C
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: VQSLOD

19-57746415-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57746415
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 57746415
    reference: chr 19
allele count: 1
allele frequency: 8.237232289950576e-6
allele num: 121400
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000470465
  ensembl transcript: ENST00000596375
  gene symbol: AURKC
  hgvsc: ENST00000596375.1:c.*309C>T
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000471830
  ensembl transcript: ENST00000598785
  gene symbol: AURKC
  hgvsc: ENST00000598785.1:c.646C>T
  hgvsp: ENSP00000471830.1:p.Arg216Cys
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000302898
  ensembl transcript: ENST00000302804
  gene symbol: AURKC
  hgvsc: ENST00000302804.7:c.748C>T
  hgvsp: ENSP00000302898.6:p.Arg250Cys
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000469983
  ensembl transcript: ENST00000599062
  gene symbol: AURKC
  hgvsc: ENST00000599062.1:c.739C>T
  hgvsp: ENSP00000469983.1:p.Arg247Cys
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000468918
  ensembl transcript: ENST00000601799
  gene symbol: AURKC
  hgvsc: ENST00000601799.1:c.*1047C>T
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000407162
  ensembl transcript: ENST00000415300
  gene symbol: AURKC
  hgvsc: ENST00000415300.2:c.691C>T
  hgvsp: ENSP00000407162.1:p.Arg231Cys
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000406798
  ensembl transcript: ENST00000448930
  gene symbol: AURKC
  hgvsc: ENST00000448930.1:c.646C>T
  hgvsp: ENSP00000406798.1:p.Arg216Cys
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000469894
  ensembl transcript: ENST00000594599
  gene symbol: AURKC
  hgvsc: ENST00000594599.1:c.232C>T
  hgvsp: ENSP00000469894.1:p.Arg78Cys
  variant of: http://identifiers.org/hgnc/11391
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1723
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24767
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1087
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4015
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15020
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 399
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8619
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2596
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3766
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8471
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Arg250Cys
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Latino
population: European (Non-Finnish)
population: South Asian
population: African
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD

19-57746416-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57746416
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 57746416
    reference: chr 19
allele count: 6
allele frequency: 4.942339373970346e-5
allele num: 121400
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000471830
  ensembl transcript: ENST00000598785
  gene symbol: AURKC
  hgvsc: ENST00000598785.1:c.647G>A
  hgvsp: ENSP00000471830.1:p.Arg216His
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000469894
  ensembl transcript: ENST00000594599
  gene symbol: AURKC
  hgvsc: ENST00000594599.1:c.233G>A
  hgvsp: ENSP00000469894.1:p.Arg78His
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000302898
  ensembl transcript: ENST00000302804
  gene symbol: AURKC
  hgvsc: ENST00000302804.7:c.749G>A
  hgvsp: ENSP00000302898.6:p.Arg250His
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000470465
  ensembl transcript: ENST00000596375
  gene symbol: AURKC
  hgvsc: ENST00000596375.1:c.*310G>A
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000406798
  ensembl transcript: ENST00000448930
  gene symbol: AURKC
  hgvsc: ENST00000448930.1:c.647G>A
  hgvsp: ENSP00000406798.1:p.Arg216His
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000469983
  ensembl transcript: ENST00000599062
  gene symbol: AURKC
  hgvsc: ENST00000599062.1:c.740G>A
  hgvsp: ENSP00000469983.1:p.Arg247His
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000407162
  ensembl transcript: ENST00000415300
  gene symbol: AURKC
  hgvsc: ENST00000415300.2:c.692G>A
  hgvsp: ENSP00000407162.1:p.Arg231His
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000468918
  ensembl transcript: ENST00000601799
  gene symbol: AURKC
  hgvsc: ENST00000601799.1:c.*1048G>A
  variant of: http://identifiers.org/hgnc/11391
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1725
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 15016
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2595
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1088
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4017
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8625
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24753
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 399
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8471
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26516
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Arg250His
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: African
population: Latino
population: South Asian
population: East Asian
reference allele: G
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: FS
site quality: BaseQRankSum

19-57746417-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57746417
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 57746417
    reference: chr 19
allele count: 8
allele frequency: 6.589677270555675e-5
allele num: 121402
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000469983
  ensembl transcript: ENST00000599062
  gene symbol: AURKC
  hgvsc: ENST00000599062.1:c.741C>T
  hgvsp: ENST00000599062.1:c.741C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000470465
  ensembl transcript: ENST00000596375
  gene symbol: AURKC
  hgvsc: ENST00000596375.1:c.*311C>T
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000469894
  ensembl transcript: ENST00000594599
  gene symbol: AURKC
  hgvsc: ENST00000594599.1:c.234C>T
  hgvsp: ENST00000594599.1:c.234C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000302898
  ensembl transcript: ENST00000302804
  gene symbol: AURKC
  hgvsc: ENST00000302804.7:c.750C>T
  hgvsp: ENST00000302804.7:c.750C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000407162
  ensembl transcript: ENST00000415300
  gene symbol: AURKC
  hgvsc: ENST00000415300.2:c.693C>T
  hgvsp: ENST00000415300.2:c.693C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000468918
  ensembl transcript: ENST00000601799
  gene symbol: AURKC
  hgvsc: ENST00000601799.1:c.*1049C>T
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000406798
  ensembl transcript: ENST00000448930
  gene symbol: AURKC
  hgvsc: ENST00000448930.1:c.648C>T
  hgvsp: ENST00000448930.1:c.648C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000471830
  ensembl transcript: ENST00000598785
  gene symbol: AURKC
  hgvsc: ENST00000598785.1:c.648C>T
  hgvsp: ENST00000598785.1:c.648C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11391
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 24750
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1089
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4014
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1723
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15026
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8619
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 625
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2594
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 399
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2163
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Arg250Arg
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: African
population: Other
population: Latino
reference allele: C
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD

19-57746446-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57746446
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 57746446
    reference: chr 19
allele count: 2
allele frequency: 1.647609318878308e-5
allele num: 121388
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000406798
  ensembl transcript: ENST00000448930
  gene symbol: AURKC
  hgvsc: ENST00000448930.1:c.657+20G>A
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000471830
  ensembl transcript: ENST00000598785
  gene symbol: AURKC
  hgvsc: ENST00000598785.1:c.657+20G>A
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000470465
  ensembl transcript: ENST00000596375
  gene symbol: AURKC
  hgvsc: ENST00000596375.1:c.*320+20G>A
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000302898
  ensembl transcript: ENST00000302804
  gene symbol: AURKC
  hgvsc: ENST00000302804.7:c.759+20G>A
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000468918
  ensembl transcript: ENST00000601799
  gene symbol: AURKC
  hgvsc: ENST00000601799.1:c.*1058+20G>A
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000407162
  ensembl transcript: ENST00000415300
  gene symbol: AURKC
  hgvsc: ENST00000415300.2:c.702+20G>A
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000469894
  ensembl transcript: ENST00000594599
  gene symbol: AURKC
  hgvsc: ENST00000594599.1:c.243+20G>A
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000469983
  ensembl transcript: ENST00000599062
  gene symbol: AURKC
  hgvsc: ENST00000599062.1:c.750+20G>A
  variant of: http://identifiers.org/hgnc/11391
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1724
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 399
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14985
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8605
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2597
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24558
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1088
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4006
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8416
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: African
population: Latino
population: Other
population: East Asian
reference allele: G
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP

19-57746453-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57746453
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 57746453
    reference: chr 19
allele count: 1
allele frequency: 8.238589553468446e-6
allele num: 121380
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000407162
  ensembl transcript: ENST00000415300
  gene symbol: AURKC
  hgvsc: ENST00000415300.2:c.702+27T>A
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000469894
  ensembl transcript: ENST00000594599
  gene symbol: AURKC
  hgvsc: ENST00000594599.1:c.243+27T>A
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000471830
  ensembl transcript: ENST00000598785
  gene symbol: AURKC
  hgvsc: ENST00000598785.1:c.657+27T>A
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000406798
  ensembl transcript: ENST00000448930
  gene symbol: AURKC
  hgvsc: ENST00000448930.1:c.657+27T>A
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000469983
  ensembl transcript: ENST00000599062
  gene symbol: AURKC
  hgvsc: ENST00000599062.1:c.750+27T>A
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000468918
  ensembl transcript: ENST00000601799
  gene symbol: AURKC
  hgvsc: ENST00000601799.1:c.*1058+27T>A
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000470465
  ensembl transcript: ENST00000596375
  gene symbol: AURKC
  hgvsc: ENST00000596375.1:c.*320+27T>A
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000302898
  ensembl transcript: ENST00000302804
  gene symbol: AURKC
  hgvsc: ENST00000302804.7:c.759+27T>A
  variant of: http://identifiers.org/hgnc/11391
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14949
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8619
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1722
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2600
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4015
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24379
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1086
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3726
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3738
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1714
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2163
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25946
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: African
population: Latino
reference allele: T
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: QD

19-57746453-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57746453
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 57746453
    reference: chr 19
allele count: 5
allele frequency: 4.119294776734223e-5
allele num: 121380
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000468918
  ensembl transcript: ENST00000601799
  gene symbol: AURKC
  hgvsc: ENST00000601799.1:c.*1058+27T>C
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000302898
  ensembl transcript: ENST00000302804
  gene symbol: AURKC
  hgvsc: ENST00000302804.7:c.759+27T>C
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000469894
  ensembl transcript: ENST00000594599
  gene symbol: AURKC
  hgvsc: ENST00000594599.1:c.243+27T>C
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000469983
  ensembl transcript: ENST00000599062
  gene symbol: AURKC
  hgvsc: ENST00000599062.1:c.750+27T>C
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000407162
  ensembl transcript: ENST00000415300
  gene symbol: AURKC
  hgvsc: ENST00000415300.2:c.702+27T>C
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000471830
  ensembl transcript: ENST00000598785
  gene symbol: AURKC
  hgvsc: ENST00000598785.1:c.657+27T>C
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000406798
  ensembl transcript: ENST00000448930
  gene symbol: AURKC
  hgvsc: ENST00000448930.1:c.657+27T>C
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000470465
  ensembl transcript: ENST00000596375
  gene symbol: AURKC
  hgvsc: ENST00000596375.1:c.*320+27T>C
  variant of: http://identifiers.org/hgnc/11391
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14949
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8619
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1086
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4015
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2600
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1722
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24379
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8382
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 150
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9353
  bin: 9.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 1714
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: Other
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum

19-57746454-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57746454
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 57746454
    reference: chr 19
allele count: 1
allele frequency: 8.239132584121543e-6
allele num: 121372
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000406798
  ensembl transcript: ENST00000448930
  gene symbol: AURKC
  hgvsc: ENST00000448930.1:c.657+28G>A
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000468918
  ensembl transcript: ENST00000601799
  gene symbol: AURKC
  hgvsc: ENST00000601799.1:c.*1058+28G>A
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000470465
  ensembl transcript: ENST00000596375
  gene symbol: AURKC
  hgvsc: ENST00000596375.1:c.*320+28G>A
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000302898
  ensembl transcript: ENST00000302804
  gene symbol: AURKC
  hgvsc: ENST00000302804.7:c.759+28G>A
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000469983
  ensembl transcript: ENST00000599062
  gene symbol: AURKC
  hgvsc: ENST00000599062.1:c.750+28G>A
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000471830
  ensembl transcript: ENST00000598785
  gene symbol: AURKC
  hgvsc: ENST00000598785.1:c.657+28G>A
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000469894
  ensembl transcript: ENST00000594599
  gene symbol: AURKC
  hgvsc: ENST00000594599.1:c.243+28G>A
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000407162
  ensembl transcript: ENST00000415300
  gene symbol: AURKC
  hgvsc: ENST00000415300.2:c.702+28G>A
  variant of: http://identifiers.org/hgnc/11391
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14946
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 365
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8621
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1090
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24363
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 603
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1725
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2608
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 399
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4021
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 99
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2165
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4825
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 150
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1715
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 136
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: European (Non-Finnish)
population: East Asian
population: Other
population: European (Finnish)
population: Latino
reference allele: G
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum

19-57746564-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57746564
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 57746564
    reference: chr 19
allele count: 1
allele frequency: 8.30937463646486e-6
allele num: 120346
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000406798
  ensembl transcript: ENST00000448930
  gene symbol: AURKC
  hgvsc: ENST00000448930.1:c.658-51T>G
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000470465
  ensembl transcript: ENST00000596375
  gene symbol: AURKC
  hgvsc: ENST00000596375.1:c.*321-51T>G
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000469894
  ensembl transcript: ENST00000594599
  gene symbol: AURKC
  hgvsc: ENST00000594599.1:c.244-51T>G
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000468918
  ensembl transcript: ENST00000601799
  gene symbol: AURKC
  hgvsc: ENST00000601799.1:c.*1059-51T>G
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000302898
  ensembl transcript: ENST00000302804
  gene symbol: AURKC
  hgvsc: ENST00000302804.7:c.760-51T>G
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000471830
  ensembl transcript: ENST00000598785
  gene symbol: AURKC
  hgvsc: ENST00000598785.1:c.658-51T>G
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000407162
  ensembl transcript: ENST00000415300
  gene symbol: AURKC
  hgvsc: ENST00000415300.2:c.703-51T>G
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000469983
  ensembl transcript: ENST00000599062
  gene symbol: AURKC
  hgvsc: ENST00000599062.1:c.751-51T>G
  variant of: http://identifiers.org/hgnc/11391
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 4619
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 742
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11916
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2279
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6516
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1798
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1547
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10096
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 666
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 414
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3215
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8576
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 848
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3985
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 594
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1062
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 653
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18765
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3237
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5790
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 656
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 116
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1995
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2340
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: South Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: East Asian
reference allele: T
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ

19-57746572-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57746572
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 57746572
    reference: chr 19
allele count: 7
allele frequency: 5.814726209463051e-5
allele num: 120384
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000471830
  ensembl transcript: ENST00000598785
  gene symbol: AURKC
  hgvsc: ENST00000598785.1:c.658-43G>T
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000470465
  ensembl transcript: ENST00000596375
  gene symbol: AURKC
  hgvsc: ENST00000596375.1:c.*321-43G>T
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000407162
  ensembl transcript: ENST00000415300
  gene symbol: AURKC
  hgvsc: ENST00000415300.2:c.703-43G>T
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000469983
  ensembl transcript: ENST00000599062
  gene symbol: AURKC
  hgvsc: ENST00000599062.1:c.751-43G>T
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000469894
  ensembl transcript: ENST00000594599
  gene symbol: AURKC
  hgvsc: ENST00000594599.1:c.244-43G>T
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000406798
  ensembl transcript: ENST00000448930
  gene symbol: AURKC
  hgvsc: ENST00000448930.1:c.658-43G>T
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000302898
  ensembl transcript: ENST00000302804
  gene symbol: AURKC
  hgvsc: ENST00000302804.7:c.760-43G>T
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000468918
  ensembl transcript: ENST00000601799
  gene symbol: AURKC
  hgvsc: ENST00000601799.1:c.*1059-43G>T
  variant of: http://identifiers.org/hgnc/11391
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1547
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3438
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 653
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1776
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10227
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9572
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11973
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6530
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3989
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 419
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2280
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 743
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 594
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 666
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3215
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 847
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1062
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1010
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4310
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1588
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4931
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3254
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5874
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 395
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: Other
population: East Asian
population: African
population: South Asian
population: European (Finnish)
reference allele: G
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP

19-57746580-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57746580
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 57746580
    reference: chr 19
allele count: 4
allele frequency: 3.321652189799206e-5
allele num: 120422
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000302898
  ensembl transcript: ENST00000302804
  gene symbol: AURKC
  hgvsc: ENST00000302804.7:c.760-35C>T
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000406798
  ensembl transcript: ENST00000448930
  gene symbol: AURKC
  hgvsc: ENST00000448930.1:c.658-35C>T
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000470465
  ensembl transcript: ENST00000596375
  gene symbol: AURKC
  hgvsc: ENST00000596375.1:c.*321-35C>T
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000468918
  ensembl transcript: ENST00000601799
  gene symbol: AURKC
  hgvsc: ENST00000601799.1:c.*1059-35C>T
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000407162
  ensembl transcript: ENST00000415300
  gene symbol: AURKC
  hgvsc: ENST00000415300.2:c.703-35C>T
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000469894
  ensembl transcript: ENST00000594599
  gene symbol: AURKC
  hgvsc: ENST00000594599.1:c.244-35C>T
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000469983
  ensembl transcript: ENST00000599062
  gene symbol: AURKC
  hgvsc: ENST00000599062.1:c.751-35C>T
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000471830
  ensembl transcript: ENST00000598785
  gene symbol: AURKC
  hgvsc: ENST00000598785.1:c.658-35C>T
  variant of: http://identifiers.org/hgnc/11391
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 742
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12253
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 666
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1063
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3994
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 653
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1549
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10437
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10797
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 847
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1547
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1919
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 419
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 594
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2280
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3215
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6564
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 328
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 698
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 462
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12560
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 405
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: South Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: East Asian
reference allele: C
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum

19-57746588-CTCTT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57746588
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 57746584
    reference: chr 19
allele count: 1
allele frequency: 8.295726041943191e-6
allele num: 120544
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000469894
  ensembl transcript: ENST00000594599
  gene symbol: AURKC
  hgvsc: ENST00000594599.1:c.244-22_244-19delTCTT
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000471830
  ensembl transcript: ENST00000598785
  gene symbol: AURKC
  hgvsc: ENST00000598785.1:c.658-22_658-19delTCTT
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000468918
  ensembl transcript: ENST00000601799
  gene symbol: AURKC
  hgvsc: ENST00000601799.1:c.*1059-22_*1059-19delTCTT
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000470465
  ensembl transcript: ENST00000596375
  gene symbol: AURKC
  hgvsc: ENST00000596375.1:c.*321-22_*321-19delTCTT
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000302898
  ensembl transcript: ENST00000302804
  gene symbol: AURKC
  hgvsc: ENST00000302804.7:c.760-22_760-19delTCTT
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000469983
  ensembl transcript: ENST00000599062
  gene symbol: AURKC
  hgvsc: ENST00000599062.1:c.751-22_751-19delTCTT
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000406798
  ensembl transcript: ENST00000448930
  gene symbol: AURKC
  hgvsc: ENST00000448930.1:c.658-22_658-19delTCTT
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000407162
  ensembl transcript: ENST00000415300
  gene symbol: AURKC
  hgvsc: ENST00000415300.2:c.703-22_703-19delTCTT
  variant of: http://identifiers.org/hgnc/11391
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 666
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 847
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4001
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6604
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1547
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1072
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 742
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1200
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11322
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 594
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3215
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1063
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12646
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 653
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2283
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10695
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2251
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 305
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13574
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 641
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 652
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 111
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: South Asian
population: Latino
population: African
population: European (Finnish)
population: East Asian
reference allele: CTCTT
site quality: FS
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum

19-57746603-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57746603
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 57746603
    reference: chr 19
allele count: 104
allele frequency: 8.610411975096039e-4
allele num: 120784
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000470465
  ensembl transcript: ENST00000596375
  gene symbol: AURKC
  hgvsc: ENST00000596375.1:c.*321-12T>C
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000302898
  ensembl transcript: ENST00000302804
  gene symbol: AURKC
  hgvsc: ENST00000302804.7:c.760-12T>C
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000407162
  ensembl transcript: ENST00000415300
  gene symbol: AURKC
  hgvsc: ENST00000415300.2:c.703-12T>C
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000469894
  ensembl transcript: ENST00000594599
  gene symbol: AURKC
  hgvsc: ENST00000594599.1:c.244-12T>C
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000469983
  ensembl transcript: ENST00000599062
  gene symbol: AURKC
  hgvsc: ENST00000599062.1:c.751-12T>C
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000468918
  ensembl transcript: ENST00000601799
  gene symbol: AURKC
  hgvsc: ENST00000601799.1:c.*1059-12T>C
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000471830
  ensembl transcript: ENST00000598785
  gene symbol: AURKC
  hgvsc: ENST00000598785.1:c.658-12T>C
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000406798
  ensembl transcript: ENST00000448930
  gene symbol: AURKC
  hgvsc: ENST00000448930.1:c.658-12T>C
  variant of: http://identifiers.org/hgnc/11391
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1070
  bin: 5.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12049
  bin: 2.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 6671
  bin: 3.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 1554
  bin: 5.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 743
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 12978
  bin: 2.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 851
  bin: 6.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 652
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4038
  bin: 4.25e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 2288
  bin: 4.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 11018
  bin: 3.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 3221
  bin: 9.75e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 668
  bin: 7.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 594
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 442
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 187
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5315
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 270
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 158
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
population: African
population: Other
reference allele: T
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum

19-57746617-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57746617
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 57746617
    reference: chr 19
allele count: 25
allele frequency: 2.065535304129418e-4
allele num: 121034
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000470465
  ensembl transcript: ENST00000596375
  gene symbol: AURKC
  hgvsc: ENST00000596375.1:c.*323A>G
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000471830
  ensembl transcript: ENST00000598785
  gene symbol: AURKC
  hgvsc: ENST00000598785.1:c.660A>G
  hgvsp: ENST00000598785.1:c.660A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000468918
  ensembl transcript: ENST00000601799
  gene symbol: AURKC
  hgvsc: ENST00000601799.1:c.*1061A>G
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000469983
  ensembl transcript: ENST00000599062
  gene symbol: AURKC
  hgvsc: ENST00000599062.1:c.753A>G
  hgvsp: ENST00000599062.1:c.753A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000407162
  ensembl transcript: ENST00000415300
  gene symbol: AURKC
  hgvsc: ENST00000415300.2:c.705A>G
  hgvsp: ENST00000415300.2:c.705A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000406798
  ensembl transcript: ENST00000448930
  gene symbol: AURKC
  hgvsc: ENST00000448930.1:c.660A>G
  hgvsp: ENST00000448930.1:c.660A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000469894
  ensembl transcript: ENST00000594599
  gene symbol: AURKC
  hgvsc: ENST00000594599.1:c.246A>G
  hgvsp: ENST00000594599.1:c.246A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000302898
  ensembl transcript: ENST00000302804
  gene symbol: AURKC
  hgvsc: ENST00000302804.7:c.762A>G
  hgvsp: ENST00000302804.7:c.762A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11391
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 653
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3212
  bin: 9.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 11994
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 669
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 850
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4068
  bin: 4.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11298
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 744
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2308
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1560
  bin: 5.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6748
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1073
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 596
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13186
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4718
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 3.25e1
  variant carriers: 0
hgvs: c.762A>G
num of homozygotes: 0
population: East Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: South Asian
reference allele: A
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum

19-57746625-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57746625
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 57746625
    reference: chr 19
allele count: 1
allele frequency: 8.257365570088519e-6
allele num: 121104
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000407162
  ensembl transcript: ENST00000415300
  gene symbol: AURKC
  hgvsc: ENST00000415300.2:c.713G>A
  hgvsp: ENSP00000407162.1:p.Arg238Lys
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000406798
  ensembl transcript: ENST00000448930
  gene symbol: AURKC
  hgvsc: ENST00000448930.1:c.668G>A
  hgvsp: ENSP00000406798.1:p.Arg223Lys
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000471830
  ensembl transcript: ENST00000598785
  gene symbol: AURKC
  hgvsc: ENST00000598785.1:c.668G>A
  hgvsp: ENSP00000471830.1:p.Arg223Lys
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000469894
  ensembl transcript: ENST00000594599
  gene symbol: AURKC
  hgvsc: ENST00000594599.1:c.254G>A
  hgvsp: ENSP00000469894.1:p.Arg85Lys
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000302898
  ensembl transcript: ENST00000302804
  gene symbol: AURKC
  hgvsc: ENST00000302804.7:c.770G>A
  hgvsp: ENSP00000302898.6:p.Arg257Lys
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000468918
  ensembl transcript: ENST00000601799
  gene symbol: AURKC
  hgvsc: ENST00000601799.1:c.*1069G>A
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000470465
  ensembl transcript: ENST00000596375
  gene symbol: AURKC
  hgvsc: ENST00000596375.1:c.*331G>A
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000469983
  ensembl transcript: ENST00000599062
  gene symbol: AURKC
  hgvsc: ENST00000599062.1:c.761G>A
  hgvsp: ENSP00000469983.1:p.Arg254Lys
  variant of: http://identifiers.org/hgnc/11391
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13242
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 654
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4081
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2315
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1073
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11948
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6774
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1562
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 596
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 746
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 669
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11350
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3209
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 849
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 214
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Arg257Lys
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: East Asian
population: Latino
population: African
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: MQ

19-57746625-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57746625
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 57746625
    reference: chr 19
allele count: 1
allele frequency: 8.257365570088519e-6
allele num: 121104
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000407162
  ensembl transcript: ENST00000415300
  gene symbol: AURKC
  hgvsc: ENST00000415300.2:c.713G>T
  hgvsp: ENSP00000407162.1:p.Arg238Met
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000468918
  ensembl transcript: ENST00000601799
  gene symbol: AURKC
  hgvsc: ENST00000601799.1:c.*1069G>T
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000471830
  ensembl transcript: ENST00000598785
  gene symbol: AURKC
  hgvsc: ENST00000598785.1:c.668G>T
  hgvsp: ENSP00000471830.1:p.Arg223Met
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000469983
  ensembl transcript: ENST00000599062
  gene symbol: AURKC
  hgvsc: ENST00000599062.1:c.761G>T
  hgvsp: ENSP00000469983.1:p.Arg254Met
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000406798
  ensembl transcript: ENST00000448930
  gene symbol: AURKC
  hgvsc: ENST00000448930.1:c.668G>T
  hgvsp: ENSP00000406798.1:p.Arg223Met
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000470465
  ensembl transcript: ENST00000596375
  gene symbol: AURKC
  hgvsc: ENST00000596375.1:c.*331G>T
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000302898
  ensembl transcript: ENST00000302804
  gene symbol: AURKC
  hgvsc: ENST00000302804.7:c.770G>T
  hgvsp: ENSP00000302898.6:p.Arg257Met
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000469894
  ensembl transcript: ENST00000594599
  gene symbol: AURKC
  hgvsc: ENST00000594599.1:c.254G>T
  hgvsp: ENSP00000469894.1:p.Arg85Met
  variant of: http://identifiers.org/hgnc/11391
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1562
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13242
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 596
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2315
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11948
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 669
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 746
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4081
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6774
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11350
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 849
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1073
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3209
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 654
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3418
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14901
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2368
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Arg257Met
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: East Asian
population: South Asian
population: Other
population: African
reference allele: G
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD

19-57746634-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57746634
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 57746634
    reference: chr 19
allele count: 1
allele frequency: 8.254775387561705e-6
allele num: 121142
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000468918
  ensembl transcript: ENST00000601799
  gene symbol: AURKC
  hgvsc: ENST00000601799.1:c.*1078T>C
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000407162
  ensembl transcript: ENST00000415300
  gene symbol: AURKC
  hgvsc: ENST00000415300.2:c.722T>C
  hgvsp: ENSP00000407162.1:p.Leu241Pro
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000469983
  ensembl transcript: ENST00000599062
  gene symbol: AURKC
  hgvsc: ENST00000599062.1:c.770T>C
  hgvsp: ENSP00000469983.1:p.Leu257Pro
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000302898
  ensembl transcript: ENST00000302804
  gene symbol: AURKC
  hgvsc: ENST00000302804.7:c.779T>C
  hgvsp: ENSP00000302898.6:p.Leu260Pro
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000471830
  ensembl transcript: ENST00000598785
  gene symbol: AURKC
  hgvsc: ENST00000598785.1:c.677T>C
  hgvsp: ENSP00000471830.1:p.Leu226Pro
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000406798
  ensembl transcript: ENST00000448930
  gene symbol: AURKC
  hgvsc: ENST00000448930.1:c.677T>C
  hgvsp: ENSP00000406798.1:p.Leu226Pro
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000469894
  ensembl transcript: ENST00000594599
  gene symbol: AURKC
  hgvsc: ENST00000594599.1:c.263T>C
  hgvsp: ENSP00000469894.1:p.Leu88Pro
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000470465
  ensembl transcript: ENST00000596375
  gene symbol: AURKC
  hgvsc: ENST00000596375.1:c.*340T>C
  variant of: http://identifiers.org/hgnc/11391
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11409
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1563
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11875
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3210
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13282
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 746
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 849
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2321
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 669
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6792
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 596
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1073
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 654
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4089
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3684
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6600
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18975
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4765
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Leu260Pro
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
population: Other
reference allele: T
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum

19-57746635-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57746635
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 57746635
    reference: chr 19
allele count: 9
allele frequency: 7.429052548165024e-5
allele num: 121146
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000302898
  ensembl transcript: ENST00000302804
  gene symbol: AURKC
  hgvsc: ENST00000302804.7:c.780A>G
  hgvsp: ENST00000302804.7:c.780A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000406798
  ensembl transcript: ENST00000448930
  gene symbol: AURKC
  hgvsc: ENST00000448930.1:c.678A>G
  hgvsp: ENST00000448930.1:c.678A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000468918
  ensembl transcript: ENST00000601799
  gene symbol: AURKC
  hgvsc: ENST00000601799.1:c.*1079A>G
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000407162
  ensembl transcript: ENST00000415300
  gene symbol: AURKC
  hgvsc: ENST00000415300.2:c.723A>G
  hgvsp: ENST00000415300.2:c.723A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000469894
  ensembl transcript: ENST00000594599
  gene symbol: AURKC
  hgvsc: ENST00000594599.1:c.264A>G
  hgvsp: ENST00000594599.1:c.264A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000469983
  ensembl transcript: ENST00000599062
  gene symbol: AURKC
  hgvsc: ENST00000599062.1:c.771A>G
  hgvsp: ENST00000599062.1:c.771A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000470465
  ensembl transcript: ENST00000596375
  gene symbol: AURKC
  hgvsc: ENST00000596375.1:c.*341A>G
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000471830
  ensembl transcript: ENST00000598785
  gene symbol: AURKC
  hgvsc: ENST00000598785.1:c.678A>G
  hgvsp: ENST00000598785.1:c.678A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/11391
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 747
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1567
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 670
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4092
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 851
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11865
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3211
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13286
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1072
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11408
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 657
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2322
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 596
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6791
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 184
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6602
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5462
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Leu260Leu
num of homozygotes: 0
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Other
reference allele: A
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff

19-57746635-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57746635
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 57746635
    reference: chr 19
allele count: 13
allele frequency: 1.073085368068281e-4
allele num: 121146
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000469983
  ensembl transcript: ENST00000599062
  gene symbol: AURKC
  hgvsc: ENST00000599062.1:c.771A>T
  hgvsp: ENST00000599062.1:c.771A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000407162
  ensembl transcript: ENST00000415300
  gene symbol: AURKC
  hgvsc: ENST00000415300.2:c.723A>T
  hgvsp: ENST00000415300.2:c.723A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000302898
  ensembl transcript: ENST00000302804
  gene symbol: AURKC
  hgvsc: ENST00000302804.7:c.780A>T
  hgvsp: ENST00000302804.7:c.780A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000406798
  ensembl transcript: ENST00000448930
  gene symbol: AURKC
  hgvsc: ENST00000448930.1:c.678A>T
  hgvsp: ENST00000448930.1:c.678A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000468918
  ensembl transcript: ENST00000601799
  gene symbol: AURKC
  hgvsc: ENST00000601799.1:c.*1079A>T
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000469894
  ensembl transcript: ENST00000594599
  gene symbol: AURKC
  hgvsc: ENST00000594599.1:c.264A>T
  hgvsp: ENST00000594599.1:c.264A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000471830
  ensembl transcript: ENST00000598785
  gene symbol: AURKC
  hgvsc: ENST00000598785.1:c.678A>T
  hgvsp: ENST00000598785.1:c.678A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000470465
  ensembl transcript: ENST00000596375
  gene symbol: AURKC
  hgvsc: ENST00000596375.1:c.*341A>T
  variant of: http://identifiers.org/hgnc/11391
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11865
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4092
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11408
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3211
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 747
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 851
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1567
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 670
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13286
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 657
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 596
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6791
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1072
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2322
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 184
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14842
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Leu260Leu
num of homozygotes: 0
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Other
population: Latino
population: East Asian
reference allele: A
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum

19-57746643-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57746643
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 57746643
    reference: chr 19
allele count: 1
allele frequency: 8.252867871585376e-6
allele num: 121170
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000302898
  ensembl transcript: ENST00000302804
  gene symbol: AURKC
  hgvsc: ENST00000302804.7:c.788C>T
  hgvsp: ENSP00000302898.6:p.Pro263Leu
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000471830
  ensembl transcript: ENST00000598785
  gene symbol: AURKC
  hgvsc: ENST00000598785.1:c.686C>T
  hgvsp: ENSP00000471830.1:p.Pro229Leu
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000469983
  ensembl transcript: ENST00000599062
  gene symbol: AURKC
  hgvsc: ENST00000599062.1:c.779C>T
  hgvsp: ENSP00000469983.1:p.Pro260Leu
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000469894
  ensembl transcript: ENST00000594599
  gene symbol: AURKC
  hgvsc: ENST00000594599.1:c.272C>T
  hgvsp: ENSP00000469894.1:p.Pro91Leu
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000407162
  ensembl transcript: ENST00000415300
  gene symbol: AURKC
  hgvsc: ENST00000415300.2:c.731C>T
  hgvsp: ENSP00000407162.1:p.Pro244Leu
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000406798
  ensembl transcript: ENST00000448930
  gene symbol: AURKC
  hgvsc: ENST00000448930.1:c.686C>T
  hgvsp: ENSP00000406798.1:p.Pro229Leu
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000468918
  ensembl transcript: ENST00000601799
  gene symbol: AURKC
  hgvsc: ENST00000601799.1:c.*1087C>T
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000470465
  ensembl transcript: ENST00000596375
  gene symbol: AURKC
  hgvsc: ENST00000596375.1:c.*349C>T
  variant of: http://identifiers.org/hgnc/11391
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2324
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4099
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1567
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 850
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 749
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 670
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11449
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11799
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3210
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1072
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 655
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6808
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 596
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13316
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6606
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3695
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Pro263Leu
num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: DP

19-57746648-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 57746648
    reference: chr 19
  end: Position
    type: ExactPosition
    position: 57746648
    reference: chr 19
allele count: 1
allele frequency: 8.25218682950982e-6
allele num: 121180
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000471830
  ensembl transcript: ENST00000598785
  gene symbol: AURKC
  hgvsc: ENST00000598785.1:c.691G>A
  hgvsp: ENSP00000471830.1:p.Gly231Arg
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000468918
  ensembl transcript: ENST00000601799
  gene symbol: AURKC
  hgvsc: ENST00000601799.1:c.*1092G>A
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000407162
  ensembl transcript: ENST00000415300
  gene symbol: AURKC
  hgvsc: ENST00000415300.2:c.736G>A
  hgvsp: ENSP00000407162.1:p.Gly246Arg
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000469983
  ensembl transcript: ENST00000599062
  gene symbol: AURKC
  hgvsc: ENST00000599062.1:c.784G>A
  hgvsp: ENSP00000469983.1:p.Gly262Arg
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000302898
  ensembl transcript: ENST00000302804
  gene symbol: AURKC
  hgvsc: ENST00000302804.7:c.793G>A
  hgvsp: ENSP00000302898.6:p.Gly265Arg
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000469894
  ensembl transcript: ENST00000594599
  gene symbol: AURKC
  hgvsc: ENST00000594599.1:c.277G>A
  hgvsp: ENSP00000469894.1:p.Gly93Arg
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000406798
  ensembl transcript: ENST00000448930
  gene symbol: AURKC
  hgvsc: ENST00000448930.1:c.691G>A
  hgvsp: ENSP00000406798.1:p.Gly231Arg
  variant of: http://identifiers.org/hgnc/11391
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000105146
  ensembl protein: ENSP00000470465
  ensembl transcript: ENST00000596375
  gene symbol: AURKC
  hgvsc: ENST00000596375.1:c.*354G>A
  variant of: http://identifiers.org/hgnc/11391
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 670
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13335
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 749
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2330
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 596
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1568
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11750
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4107
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6816
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11480
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 850
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3210
  bin: 9.75e1
  variant carriers: 0
hgvs: p.Gly265Arg
num of homozygotes: 0
reference allele: G

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3834
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2256
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2279
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3736
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3955
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3909
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34365
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 5
bin: 5.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.996973057212216e-5
allele num: 66734
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.567e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.04e0

QD
type: SiteQuality
SIO_000300: 1.386e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 3.033407e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.5e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.528e0

MQRankSum
type: SiteQuality
SIO_000300: 1.37e-1

MQ
type: SiteQuality
SIO_000300: 5.926e1

VQSLOD
type: SiteQuality
SIO_000300: 3.5e-2

GenotypeQuality
all individuals: 3951
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6336
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2258
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34364
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3736
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3831
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.609840476648087e-5
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66734
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.975e1

DP
type: SiteQuality
SIO_000300: 3.033269e6

MQRankSum
type: SiteQuality
SIO_000300: 2.21e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.06e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.2e0

QD
type: SiteQuality
SIO_000300: 1.036e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.11e0

FS
type: SiteQuality
SIO_000300: 1.871e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.26e-1

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3831
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3736
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2278
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3908
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6336
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3951
bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66734
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.06e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.2e0

MQ
type: SiteQuality
SIO_000300: 5.975e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.26e-1

DP
type: SiteQuality
SIO_000300: 3.033269e6

FS
type: SiteQuality
SIO_000300: 1.871e0

QD
type: SiteQuality
SIO_000300: 1.036e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.11e0

MQRankSum
type: SiteQuality
SIO_000300: 2.21e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

GenotypeQuality
all individuals: 2260
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 34362
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3733
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6345
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3832
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3909
bin: 8.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66734
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.609840476648087e-5
allele num: 10406
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -6.999e0

DP
type: SiteQuality
SIO_000300: 3.033196e6

QD
type: SiteQuality
SIO_000300: 1.455e1

FS
type: SiteQuality
SIO_000300: 1.422e0

MQRankSum
type: SiteQuality
SIO_000300: -1.551e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.51e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 5.44e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.818e0

MQ
type: SiteQuality
SIO_000300: 5.975e1

GenotypeQuality
all individuals: 6
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3732
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3909
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3948
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6337
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2278
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3829
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34361
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 5
bin: 3.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.997062878379188e-5
allele num: 66732
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.82e-1

MQ
type: SiteQuality
SIO_000300: 5.944e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.0e-1

QD
type: SiteQuality
SIO_000300: 1.303e1

VQSLOD
type: SiteQuality
SIO_000300: 1.05e0

MQRankSum
type: SiteQuality
SIO_000300: -2.76e-1

DP
type: SiteQuality
SIO_000300: 3.033121e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.971e0

GenotypeQuality
all individuals: 3728
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6349
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2252
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3940
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3829
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 5.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498531439189594e-5
allele num: 66732
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.242e0

DP
type: SiteQuality
SIO_000300: 3.032603e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

FS
type: SiteQuality
SIO_000300: 9.0e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.08e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.06e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.25e-1

MQ
type: SiteQuality
SIO_000300: 5.968e1

QD
type: SiteQuality
SIO_000300: 1.261e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.28e0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3827
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6364
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34353
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3932
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2275
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.637070305752289e-5
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66730
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.911e0

FS
type: SiteQuality
SIO_000300: 1.008e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.005e0

MQ
type: SiteQuality
SIO_000300: 5.789e1

MQRankSum
type: SiteQuality
SIO_000300: 1.68e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.945e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.19e-1

DP
type: SiteQuality
SIO_000300: 3.032085e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

QD
type: SiteQuality
SIO_000300: 8.83e0

GenotypeQuality
all individuals: 3718
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3935
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3899
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2243
bin: 7.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 908
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.498531439189594e-5
allele num: 66732
num of homozygotes: 0

MQRankSum
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ReadPosRankSum
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VQSLOD
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ClippingRankSum
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BaseQRankSum
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QD
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FS
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InbreedingCoeff
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MQ
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 908
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.498576352465158e-5
allele num: 66730
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African
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allele frequency: 0.0e0
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South Asian
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MQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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InbreedingCoeff
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BaseQRankSum
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DP
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ReadPosRankSum
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QD
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ClippingRankSum
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FS
type: SiteQuality
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele frequency: 5.994485073732166e-5
allele num: 66728
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6596
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Other
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allele num: 908
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East Asian
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African
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allele frequency: 9.609840476648087e-5
allele num: 10406
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Latino
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allele frequency: 3.454828122300916e-3
allele num: 11578
num of homozygotes: 0

South Asian
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MQ
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QD
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DP
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VQSLOD
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ClippingRankSum
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MQRankSum
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InbreedingCoeff
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FS
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SIO_000300: 1.906e0

BaseQRankSum
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.498621268433042e-5
allele num: 66728
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11578
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Other
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allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

InbreedingCoeff
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SIO_000300: 2.05e-2

BaseQRankSum
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SIO_000300: -2.554e0

VQSLOD
type: SiteQuality
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MQRankSum
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SIO_000300: 2.27e-1

QD
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MQ
type: SiteQuality
SIO_000300: 5.956e1

ReadPosRankSum
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FS
type: SiteQuality
SIO_000300: 1.906e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.92e-1

DP
type: SiteQuality
SIO_000300: 3.029712e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.498621268433042e-5
allele num: 66728
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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East Asian
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num of homozygotes: 0

VQSLOD
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MQ
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InbreedingCoeff
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ClippingRankSum
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MQRankSum
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FS
type: SiteQuality
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ReadPosRankSum
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DP
type: SiteQuality
SIO_000300: 3.027805e6

QD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: -7.53e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 4
allele frequency: 5.994485073732166e-5
allele num: 66728
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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InbreedingCoeff
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DP
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BaseQRankSum
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MQ
type: SiteQuality
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VQSLOD
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FS
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MQRankSum
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QD
type: SiteQuality
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ReadPosRankSum
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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European (Finnish)
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Latino
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
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East Asian
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South Asian
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ClippingRankSum
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DP
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InbreedingCoeff
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MQ
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VQSLOD
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ReadPosRankSum
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MQRankSum
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FS
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QD
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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num of homozygotes: 0

European (Non-Finnish)
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allele num: 66726
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Latino
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Other
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East Asian
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African
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South Asian
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QD
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FS
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MQ
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ClippingRankSum
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VQSLOD
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BaseQRankSum
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InbreedingCoeff
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MQRankSum
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ReadPosRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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South Asian
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European (Finnish)
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East Asian
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Other
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Latino
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African
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BaseQRankSum
type: SiteQuality
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MQ
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MQRankSum
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DP
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ClippingRankSum
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InbreedingCoeff
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FS
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VQSLOD
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ReadPosRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele frequency: 0.0e0
allele num: 16500
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6582
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8652
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66708
num of homozygotes: 0

African
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allele count: 1
allele frequency: 9.611687812379854e-5
allele num: 10404
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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ReadPosRankSum
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SIO_000300: 2.82e0

DP
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MQRankSum
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MQ
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FS
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VQSLOD
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BaseQRankSum
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InbreedingCoeff
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QD
type: SiteQuality
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ClippingRankSum
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SIO_000300: -2.732e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65606
num of homozygotes: 0

South Asian
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allele frequency: 1.235483073881888e-4
allele num: 16188
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6516
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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ClippingRankSum
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VQSLOD
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MQ
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FS
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QD
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ReadPosRankSum
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InbreedingCoeff
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BaseQRankSum
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MQRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.52031135976648e-5
allele num: 65776
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16214
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6520
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10210
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8512
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.13e0

VQSLOD
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BaseQRankSum
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QD
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MQRankSum
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SIO_000300: -3.163e0

ClippingRankSum
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ReadPosRankSum
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DP
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InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

MQ
type: SiteQuality
SIO_000300: 4.964e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 10248
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.517174414370676e-5
allele num: 65912
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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Other
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16248
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6544
num of homozygotes: 0

FS
type: SiteQuality
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MQRankSum
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InbreedingCoeff
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QD
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ClippingRankSum
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BaseQRankSum
type: SiteQuality
SIO_000300: -2.336e0

VQSLOD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 2.1e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
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SIO_000300: 1.718744e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66068
num of homozygotes: 0

Latino
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allele frequency: 8.798169980644026e-5
allele num: 11366
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10278
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6552
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.933e1

VQSLOD
type: SiteQuality
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MQRankSum
type: SiteQuality
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BaseQRankSum
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FS
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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QD
type: SiteQuality
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DP
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SIO_000300: 1.760813e6

ClippingRankSum
type: SiteQuality
SIO_000300: 7.95e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6558
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 66164
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
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allele num: 902
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African
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allele frequency: 6.792159906850379e-4
allele num: 10306
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8572
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FS
type: SiteQuality
SIO_000300: 8.7e-1

MQRankSum
type: SiteQuality
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InbreedingCoeff
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QD
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ClippingRankSum
type: SiteQuality
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MQ
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VQSLOD
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BaseQRankSum
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ReadPosRankSum
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DP
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66164
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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Other
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East Asian
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allele frequency: 1.166588894073728e-4
allele num: 8572
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African
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South Asian
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MQ
type: SiteQuality
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QD
type: SiteQuality
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FS
type: SiteQuality
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ClippingRankSum
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BaseQRankSum
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DP
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MQRankSum
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ReadPosRankSum
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VQSLOD
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.505933377507379e-5
allele num: 66404
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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ClippingRankSum
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VQSLOD
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ReadPosRankSum
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DP
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FS
type: SiteQuality
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BaseQRankSum
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MQ
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MQRankSum
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InbreedingCoeff
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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East Asian
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Other
type: Population
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European (Finnish)
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele num: 66666
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Latino
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num of homozygotes: 0

MQ
type: SiteQuality
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ClippingRankSum
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InbreedingCoeff
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DP
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BaseQRankSum
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MQRankSum
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ReadPosRankSum
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FS
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QD
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele frequency: 0.0e0
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Other
type: Population
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.512401693889897e-4
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 2.998410842253606e-5
allele num: 66702
num of homozygotes: 0

South Asian
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allele frequency: 6.06060606060606e-5
allele num: 16500
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MQRankSum
type: SiteQuality
SIO_000300: 8.500000000000001e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.17e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -8.3e-1

VQSLOD
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DP
type: SiteQuality
SIO_000300: 1.828026e6

BaseQRankSum
type: SiteQuality
SIO_000300: -4.36e-1

FS
type: SiteQuality
SIO_000300: 1.161e0

MQ
type: SiteQuality
SIO_000300: 5.957e1

QD
type: SiteQuality
SIO_000300: 1.302e1

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10394
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66704
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16502
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BaseQRankSum
type: SiteQuality
SIO_000300: -1.309e0

VQSLOD
type: SiteQuality
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MQ
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SIO_000300: 5.968e1

InbreedingCoeff
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SIO_000300: -2.0e-4

DP
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SIO_000300: 1.829022e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.5e-2

FS
type: SiteQuality
SIO_000300: 6.102e0

QD
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MQRankSum
type: SiteQuality
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499115521842113e-5
allele num: 66706
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

QD
type: SiteQuality
SIO_000300: 2.012e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.501e0

FS
type: SiteQuality
SIO_000300: 1.294e0

VQSLOD
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SIO_000300: -1.837e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.904e0

MQRankSum
type: SiteQuality
SIO_000300: -3.24e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.829607e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.87e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.512401693889897e-4
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10394
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.49907057624273e-5
allele num: 66708
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.237e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.13e0

VQSLOD
type: SiteQuality
SIO_000300: 9.77e-1

MQ
type: SiteQuality
SIO_000300: 5.963e1

DP
type: SiteQuality
SIO_000300: 1.83047e6

MQRankSum
type: SiteQuality
SIO_000300: -1.08e-1

QD
type: SiteQuality
SIO_000300: 1.195e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.94e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.35e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
type: Population
allele count: 200
allele frequency: 1.924187030979411e-2
allele num: 10394
num of homozygotes: 2

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 10
allele frequency: 1.49902563333833e-4
allele num: 66710
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 20
allele frequency: 1.731002250302925e-3
allele num: 11554
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.97e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.02e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.55e-1

DP
type: SiteQuality
SIO_000300: 1.841259e6

MQRankSum
type: SiteQuality
SIO_000300: 2.56e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.36e0

QD
type: SiteQuality
SIO_000300: 1.346e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.76e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498756032493031e-5
allele num: 66722
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11554
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.33e1

VQSLOD
type: SiteQuality
SIO_000300: 6.67e-1

FS
type: SiteQuality
SIO_000300: 4.429e0

BaseQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.963e1

MQRankSum
type: SiteQuality
SIO_000300: 1.21e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.0e-2

DP
type: SiteQuality
SIO_000300: 1.834925e6

ClippingRankSum
type: SiteQuality
SIO_000300: 6.0e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele count: 1
allele frequency: 9.619084263178146e-5
allele num: 10396
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66722
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
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num of homozygotes: 0

DP
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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FS
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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BaseQRankSum
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VQSLOD
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MQRankSum
type: SiteQuality
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QD
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MQ
type: SiteQuality
SIO_000300: 5.973e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
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South Asian
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allele count: 1
allele frequency: 6.05766900896535e-5
allele num: 16508
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66720
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.53e0

FS
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DP
type: SiteQuality
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MQRankSum
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ClippingRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
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InbreedingCoeff
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SIO_000300: 1.0e-4

ReadPosRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498756032493031e-5
allele num: 66722
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
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allele num: 908
num of homozygotes: 0

VQSLOD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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BaseQRankSum
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FS
type: SiteQuality
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QD
type: SiteQuality
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ClippingRankSum
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MQ
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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DP
type: SiteQuality
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MQRankSum
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66724
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.149e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.168e0

QD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.837298e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.99e0

MQRankSum
type: SiteQuality
SIO_000300: 2.19e0

MQ
type: SiteQuality
SIO_000300: 5.917e1

FS
type: SiteQuality
SIO_000300: 8.659000000000001e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.599e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.05766900896535e-5
allele num: 16508
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66726
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.87e-1

InbreedingCoeff
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SIO_000300: -1.0e-4

DP
type: SiteQuality
SIO_000300: 1.837538e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
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SIO_000300: -2.464e0

BaseQRankSum
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SIO_000300: 2.02e0

MQRankSum
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SIO_000300: 1.53e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.889999999999999e-1

QD
type: SiteQuality
SIO_000300: 2.055e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
all individuals: 4826
bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66728
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.613535858488752e-5
allele num: 10402
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.58e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.7e-2

FS
type: SiteQuality
SIO_000300: 1.413e0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.63e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.83873e6

BaseQRankSum
type: SiteQuality
SIO_000300: -3.759e0

MQRankSum
type: SiteQuality
SIO_000300: 1.61e0

VQSLOD
type: SiteQuality
SIO_000300: -4.114e-1

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.75e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66732
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.840009e6

BaseQRankSum
type: SiteQuality
SIO_000300: -4.369e0

FS
type: SiteQuality
SIO_000300: 8.02e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.09e0

VQSLOD
type: SiteQuality
SIO_000300: 3.55e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -6.54e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.07e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.015e1

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 16

Latino
type: Population
allele count: 3
allele frequency: 2.592016588906169e-4
allele num: 11574
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 10
allele frequency: 1.498531439189594e-4
allele num: 66732
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.613535858488752e-5
allele num: 10402
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.101321585903084e-3
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056935190793458e-5
allele num: 16510
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 5.24e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.03e-2

DP
type: SiteQuality
SIO_000300: 1.841597e6

MQRankSum
type: SiteQuality
SIO_000300: 2.2e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.407e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.35e-1

MQ
type: SiteQuality
SIO_000300: 5.968e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.9e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 2.12e-1

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66732
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.979e1

ClippingRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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MQRankSum
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QD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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BaseQRankSum
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VQSLOD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 1.4774e1

DP
type: SiteQuality
SIO_000300: 1.841641e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498531439189594e-5
allele num: 66732
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.19e-1

VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

BaseQRankSum
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ReadPosRankSum
type: SiteQuality
SIO_000300: 8.32e-1

DP
type: SiteQuality
SIO_000300: 1.841995e6

QD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -5.5e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498441620714457e-5
allele num: 66736
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.17e-1

DP
type: SiteQuality
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FS
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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MQRankSum
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InbreedingCoeff
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QD
type: SiteQuality
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MQ
type: SiteQuality
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VQSLOD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2161
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66734
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.696e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -8.234e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.2e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.278e0

MQRankSum
type: SiteQuality
SIO_000300: -1.157e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.02e-1

QD
type: SiteQuality
SIO_000300: 1.582e1

DP
type: SiteQuality
SIO_000300: 1.842363e6

MQ
type: SiteQuality
SIO_000300: 5.957e1

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26599
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8464
bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498441620714457e-5
allele num: 66736
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 7.241e0

QD
type: SiteQuality
SIO_000300: 1.446e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.29e0

MQRankSum
type: SiteQuality
SIO_000300: -5.69e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.01e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.677e0

VQSLOD
type: SiteQuality
SIO_000300: 1.46e-1

DP
type: SiteQuality
SIO_000300: 1.842353e6

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66736
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.085e0

DP
type: SiteQuality
SIO_000300: 1.84234e6

QD
type: SiteQuality
SIO_000300: 7.5e0

MQ
type: SiteQuality
SIO_000300: 5.892e1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.0e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.04e-1

VQSLOD
type: SiteQuality
SIO_000300: -4.214e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

FS
type: SiteQuality
SIO_000300: 1.21e0

MQRankSum
type: SiteQuality
SIO_000300: 6.900000000000001e-2

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 5.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498441620714457e-5
allele num: 66736
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.82e-1

MQ
type: SiteQuality
SIO_000300: 5.957e1

QD
type: SiteQuality
SIO_000300: 1.997e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.98e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.13e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

FS
type: SiteQuality
SIO_000300: 1.7337e1

MQRankSum
type: SiteQuality
SIO_000300: 7.55e-1

DP
type: SiteQuality
SIO_000300: 1.842452e6

VQSLOD
type: SiteQuality
SIO_000300: -2.79e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 5

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 5.993946114424431e-5
allele num: 66734
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.609840476648087e-5
allele num: 10406
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.7e0

VQSLOD
type: SiteQuality
SIO_000300: 5.32e-1

QD
type: SiteQuality
SIO_000300: 1.191e1

MQRankSum
type: SiteQuality
SIO_000300: 2.4e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 2.15e-1

DP
type: SiteQuality
SIO_000300: 1.842875e6

FS
type: SiteQuality
SIO_000300: 3.222e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -7.46e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66736
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.101321585903084e-3
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
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QD
type: SiteQuality
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ClippingRankSum
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DP
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: -1.111e0

FS
type: SiteQuality
SIO_000300: 7.81e0

ReadPosRankSum
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InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

VQSLOD
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SIO_000300: -3.917e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

South Asian
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allele frequency: 1.211387038158692e-4
allele num: 16510
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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MQ
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ClippingRankSum
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DP
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MQRankSum
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QD
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BaseQRankSum
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FS
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ReadPosRankSum
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VQSLOD
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InbreedingCoeff
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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South Asian
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allele num: 16510
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African
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Latino
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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VQSLOD
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MQ
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ReadPosRankSum
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QD
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MQRankSum
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BaseQRankSum
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FS
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InbreedingCoeff
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ClippingRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Finnish)
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allele count: 1
allele frequency: 1.511944360447536e-4
allele num: 6614
num of homozygotes: 0

African
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allele count: 1
allele frequency: 9.609840476648087e-5
allele num: 10406
num of homozygotes: 0

Latino
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allele count: 4
allele frequency: 3.454828122300915e-4
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 46
allele frequency: 6.893038031588096e-4
allele num: 66734
num of homozygotes: 0

Other
type: Population
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num of homozygotes: 0

East Asian
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InbreedingCoeff
type: SiteQuality
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DP
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BaseQRankSum
type: SiteQuality
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ReadPosRankSum
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FS
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MQRankSum
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ClippingRankSum
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QD
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MQ
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.498531439189594e-5
allele num: 66732
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
allele num: 16508
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African
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allele frequency: 0.0e0
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Other
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BaseQRankSum
type: SiteQuality
SIO_000300: 1.66e0

MQ
type: SiteQuality
SIO_000300: 5.964e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.0e-1

MQRankSum
type: SiteQuality
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QD
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InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

FS
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ReadPosRankSum
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DP
type: SiteQuality
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele count: 2
allele frequency: 2.997062878379188e-5
allele num: 66732
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
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allele num: 908
num of homozygotes: 0

African
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allele count: 4
allele frequency: 3.843936190659235e-4
allele num: 10406
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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VQSLOD
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InbreedingCoeff
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MQRankSum
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MQ
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ClippingRankSum
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ReadPosRankSum
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QD
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DP
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FS
type: SiteQuality
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BaseQRankSum
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SIO_000300: -1.3e-2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
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allele num: 8654
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South Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66732
num of homozygotes: 0

African
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allele frequency: 0.0e0
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Other
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Latino
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allele frequency: 6.909656244601831e-4
allele num: 11578
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
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BaseQRankSum
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DP
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ReadPosRankSum
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VQSLOD
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MQ
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FS
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MQRankSum
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ClippingRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
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allele count: 2
allele frequency: 1.21197430614471e-4
allele num: 16502
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66732
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10404
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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East Asian
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QD
type: SiteQuality
SIO_000300: 1.02e1

MQ
type: SiteQuality
SIO_000300: 5.959e1

ReadPosRankSum
type: SiteQuality
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InbreedingCoeff
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MQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 1.941e0

BaseQRankSum
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SIO_000300: -3.598e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.17e-1

DP
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16496
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.498621268433042e-5
allele num: 66728
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Latino
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num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 4.96e-1

MQ
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
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ReadPosRankSum
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ClippingRankSum
type: SiteQuality
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BaseQRankSum
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VQSLOD
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DP
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.199e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16496
num of homozygotes: 0

Latino
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
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allele count: 5
allele frequency: 7.493106342165208e-5
allele num: 66728
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

InbreedingCoeff
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VQSLOD
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MQ
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BaseQRankSum
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QD
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FS
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MQRankSum
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DP
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ClippingRankSum
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele frequency: 0.0e0
allele num: 16494
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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East Asian
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allele frequency: 1.155802126675913e-4
allele num: 8652
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Other
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European (Finnish)
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allele frequency: 0.0e0
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Latino
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InbreedingCoeff
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BaseQRankSum
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MQRankSum
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ReadPosRankSum
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FS
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MQ
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QD
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VQSLOD
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DP
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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European (Finnish)
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South Asian
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Other
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Latino
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European (Non-Finnish)
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East Asian
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FS
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QD
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BaseQRankSum
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ReadPosRankSum
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InbreedingCoeff
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MQRankSum
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DP
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VQSLOD
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ClippingRankSum
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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European (Non-Finnish)
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Other
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East Asian
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African
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South Asian
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allele frequency: 3.642987249544627e-4
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European (Finnish)
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QD
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FS
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MQRankSum
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BaseQRankSum
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MQ
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InbreedingCoeff
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ClippingRankSum
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VQSLOD
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ReadPosRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10248
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16472
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.037006852002777e-5
allele num: 66258
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11494
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6588
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8458
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -3.4e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.453e0

VQSLOD
type: SiteQuality
SIO_000300: 1.7e0

QD
type: SiteQuality
SIO_000300: 1.243e1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

DP
type: SiteQuality
SIO_000300: 2.335673e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.51e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.9e-2

GenotypeQuality
all individuals: 4487
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6210
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18801
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3284
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.50779530170984e-5
allele num: 66322
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16478
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11508
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10256
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8482
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 4.599e0

QD
type: SiteQuality
SIO_000300: 1.27e1

MQ
type: SiteQuality
SIO_000300: 5.712e1

MQRankSum
type: SiteQuality
SIO_000300: -8.78e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

DP
type: SiteQuality
SIO_000300: 2.349217e6

ClippingRankSum
type: SiteQuality
SIO_000300: 6.46e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.03e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.202e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.0e-2

GenotypeQuality
all individuals: 100
bin: 4.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 103

GenotypeQuality
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GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8518
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.676036786395974e-5
allele num: 11526
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16492
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66484
num of homozygotes: 0

African
type: Population
allele count: 103
allele frequency: 1.003898635477583e-2
allele num: 10260
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.47e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.45e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.79e-1

DP
type: SiteQuality
SIO_000300: 2.370058e6

MQ
type: SiteQuality
SIO_000300: 5.967e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -6.45e-1

QD
type: SiteQuality
SIO_000300: 1.226e1

MQRankSum
type: SiteQuality
SIO_000300: 2.28e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.7e-2

GenotypeQuality
all individuals: 3649
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 86
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14891
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 25

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 3402
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5416
bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8592
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 5
allele frequency: 4.328254847645429e-4
allele num: 11552
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 14
allele frequency: 2.102165230187093e-4
allele num: 66598
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.945903872348706e-4
allele num: 10278
num of homozygotes: 0

South Asian
type: Population
allele count: 4
allele frequency: 2.423654871546292e-4
allele num: 16504
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.379938e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.15e-2

VQSLOD
type: SiteQuality
SIO_000300: 4.27e0

MQ
type: SiteQuality
SIO_000300: 5.967e1

MQRankSum
type: SiteQuality
SIO_000300: 2.47e-1

QD
type: SiteQuality
SIO_000300: 1.343e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.76e0

FS
type: SiteQuality
SIO_000300: 1.856e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.33e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.24e-1

GenotypeQuality
all individuals: 2368
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6576
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3418
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.162250116225012e-4
allele num: 8604
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10284
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66638
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -4.13e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.412e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -1.81e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.41e0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 1.73e0

DP
type: SiteQuality
SIO_000300: 2.382252e6

QD
type: SiteQuality
SIO_000300: 1.087e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6576
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35
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variant carriers: 0

GenotypeQuality
all individuals: 97
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variant carriers: 0

GenotypeQuality
all individuals: 214
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variant carriers: 0

GenotypeQuality
all individuals: 3671
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variant carriers: 0

GenotypeQuality
all individuals: 27
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variant carriers: 0

GenotypeQuality
all individuals: 80
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variant carriers: 0

GenotypeQuality
all individuals: 7
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 5446
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 5.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500645277469312e-5
allele num: 66638
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8604
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10284
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 1.73e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.81e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.382252e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.41e0

MQRankSum
type: SiteQuality
SIO_000300: -4.13e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.412e0

QD
type: SiteQuality
SIO_000300: 1.087e1

GenotypeQuality
all individuals: 5463
bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 14816
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 63
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 81
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variant carriers: 0

GenotypeQuality
all individuals: 4
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GenotypeQuality
all individuals: 43
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GenotypeQuality
all individuals: 68
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GenotypeQuality
all individuals: 2385
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10284
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500105007350515e-5
allele num: 66662
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8618
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.15e0

DP
type: SiteQuality
SIO_000300: 2.384485e6

FS
type: SiteQuality
SIO_000300: 4.42e0

MQ
type: SiteQuality
SIO_000300: 5.934e1

QD
type: SiteQuality
SIO_000300: 8.279999999999999e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 2.15e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.37e0

VQSLOD
type: SiteQuality
SIO_000300: -2.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.994e0

GenotypeQuality
all individuals: 26
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 64
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 18990
bin: 9.75e1
variant carriers: 9

African
type: Population
allele count: 5
allele frequency: 4.860031104199067e-4
allele num: 10288
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.000420029402058e-5
allele num: 66662
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8618
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.86e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.08e0

MQRankSum
type: SiteQuality
SIO_000300: 5.39e-1

QD
type: SiteQuality
SIO_000300: 1.298e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.48e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.26e-1

DP
type: SiteQuality
SIO_000300: 2.385226e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 19
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GenotypeQuality
all individuals: 18990
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GenotypeQuality
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GenotypeQuality
all individuals: 2384
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 26
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GenotypeQuality
all individuals: 4767
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10288
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 13
allele frequency: 1.950136509555669e-4
allele num: 66662
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8618
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.298e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.08e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.26e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.385226e6

MQRankSum
type: SiteQuality
SIO_000300: 5.39e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.86e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -2.48e-1

GenotypeQuality
all individuals: 7
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 171
bin: 2.25e1
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GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2386
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18997
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4780
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5471
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14777
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3431
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10296
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.05766900896535e-5
allele num: 16508
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66672
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.56e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.36e0

FS
type: SiteQuality
SIO_000300: 2.597e0

MQRankSum
type: SiteQuality
SIO_000300: -2.8e-1

MQ
type: SiteQuality
SIO_000300: 5.897e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.67e-1

QD
type: SiteQuality
SIO_000300: 8.460000000000001e0

VQSLOD
type: SiteQuality
SIO_000300: -7.37e-1

DP
type: SiteQuality
SIO_000300: 2.386357e6