20-50007800-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50007800
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 50007800
    reference: chr 20
allele count: 5
allele frequency: 8.138020833333333e-5
allele num: 61440
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000396471
  ensembl transcript: ENST00000414705
  gene symbol: NFATC2
  hgvsc: ENST00000414705.1:c.*233C>A
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000379330
  ensembl transcript: ENST00000396009
  gene symbol: NFATC2
  hgvsc: ENST00000396009.3:c.*133C>A
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000360619
  ensembl transcript: ENST00000371564
  gene symbol: NFATC2
  hgvsc: ENST00000371564.3:c.*233C>A
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477370
  ensembl transcript: ENST00000609943
  gene symbol: NFATC2
  hgvsc: ENST00000609943.1:c.*133C>A
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477342
  ensembl transcript: ENST00000609507
  gene symbol: NFATC2
  hgvsc: ENST00000609507.1:c.*233C>A
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477142
  ensembl transcript: ENST00000610033
  gene symbol: NFATC2
  hgvsc: ENST00000610033.1:c.*233C>A
  variant of: http://identifiers.org/hgnc/7776
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26683
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 642
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1821
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5204
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1968
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17088
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3739
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2297
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2038
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1122
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 461
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 319
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26616
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 386
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 190
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2693
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 411
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2479
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1958
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 443
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 586
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
population: East Asian
population: South Asian
population: Other
reference allele: G
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP

http://identifiers.org/exac.variant/20-50007811-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50007811
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 50007811
    reference: chr 20
allele count: 1
allele frequency: 1.27164983850047e-5
allele num: 78638
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000396471
  ensembl transcript: ENST00000414705
  gene symbol: NFATC2
  hgvsc: ENST00000414705.1:c.*222T>G
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477142
  ensembl transcript: ENST00000610033
  gene symbol: NFATC2
  hgvsc: ENST00000610033.1:c.*222T>G
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477342
  ensembl transcript: ENST00000609507
  gene symbol: NFATC2
  hgvsc: ENST00000609507.1:c.*222T>G
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477370
  ensembl transcript: ENST00000609943
  gene symbol: NFATC2
  hgvsc: ENST00000609943.1:c.*122T>G
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000379330
  ensembl transcript: ENST00000396009
  gene symbol: NFATC2
  hgvsc: ENST00000396009.3:c.*122T>G
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000360619
  ensembl transcript: ENST00000371564
  gene symbol: NFATC2
  hgvsc: ENST00000371564.3:c.*222T>G
  variant of: http://identifiers.org/hgnc/7776
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5087
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2102
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24550
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4151
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19670
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 677
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1078
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2214
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1739
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 770
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 332
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 502
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1571
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1215
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 223
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 244
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 776
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1006
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24395
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19939
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 744
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: African
population: Other
population: South Asian
population: European (Finnish)
population: East Asian
reference allele: A
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: MQ

20-50007815-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50007815
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 50007815
    reference: chr 20
allele count: 2
allele frequency: 2.398944464435648e-5
allele num: 83370
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000396471
  ensembl transcript: ENST00000414705
  gene symbol: NFATC2
  hgvsc: ENST00000414705.1:c.*218T>C
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000379330
  ensembl transcript: ENST00000396009
  gene symbol: NFATC2
  hgvsc: ENST00000396009.3:c.*118T>C
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477142
  ensembl transcript: ENST00000610033
  gene symbol: NFATC2
  hgvsc: ENST00000610033.1:c.*218T>C
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477342
  ensembl transcript: ENST00000609507
  gene symbol: NFATC2
  hgvsc: ENST00000609507.1:c.*218T>C
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477370
  ensembl transcript: ENST00000609943
  gene symbol: NFATC2
  hgvsc: ENST00000609943.1:c.*118T>C
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000360619
  ensembl transcript: ENST00000371564
  gene symbol: NFATC2
  hgvsc: ENST00000371564.3:c.*218T>C
  variant of: http://identifiers.org/hgnc/7776
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2357
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5537
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17540
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2100
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3755
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 691
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26732
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
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  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 820
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 198
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1440
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 255
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 869
  bin: 5.25e1
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genotype quality: GenotypeQuality
  all individuals: 1118
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 3776
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 240
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 950
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 427
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: Latino
population: South Asian
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: A
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: QD

20-50007818-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50007818
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 50007818
    reference: chr 20
allele count: 1
allele frequency: 1.151436993367723e-5
allele num: 86848
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000379330
  ensembl transcript: ENST00000396009
  gene symbol: NFATC2
  hgvsc: ENST00000396009.3:c.*115C>A
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000396471
  ensembl transcript: ENST00000414705
  gene symbol: NFATC2
  hgvsc: ENST00000414705.1:c.*215C>A
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477342
  ensembl transcript: ENST00000609507
  gene symbol: NFATC2
  hgvsc: ENST00000609507.1:c.*215C>A
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000360619
  ensembl transcript: ENST00000371564
  gene symbol: NFATC2
  hgvsc: ENST00000371564.3:c.*215C>A
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477370
  ensembl transcript: ENST00000609943
  gene symbol: NFATC2
  hgvsc: ENST00000609943.1:c.*115C>A
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477142
  ensembl transcript: ENST00000610033
  gene symbol: NFATC2
  hgvsc: ENST00000610033.1:c.*215C>A
  variant of: http://identifiers.org/hgnc/7776
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 661
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28249
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15934
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5912
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3542
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2510
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 702
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2026
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 562
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 931
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 814
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 248
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 247
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 446
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 205
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16359
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1176
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 248
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1577
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1374
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Other
population: European (Finnish)
population: Latino
reference allele: G
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: MQRankSum

20-50007822-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50007822
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 50007822
    reference: chr 20
allele count: 98
allele frequency: 1.065194234907937e-3
allele num: 92002
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477142
  ensembl transcript: ENST00000610033
  gene symbol: NFATC2
  hgvsc: ENST00000610033.1:c.*211G>A
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000360619
  ensembl transcript: ENST00000371564
  gene symbol: NFATC2
  hgvsc: ENST00000371564.3:c.*211G>A
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477370
  ensembl transcript: ENST00000609943
  gene symbol: NFATC2
  hgvsc: ENST00000609943.1:c.*111G>A
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000396471
  ensembl transcript: ENST00000414705
  gene symbol: NFATC2
  hgvsc: ENST00000414705.1:c.*211G>A
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000379330
  ensembl transcript: ENST00000396009
  gene symbol: NFATC2
  hgvsc: ENST00000396009.3:c.*111G>A
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477342
  ensembl transcript: ENST00000609507
  gene symbol: NFATC2
  hgvsc: ENST00000609507.1:c.*211G>A
  variant of: http://identifiers.org/hgnc/7776
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2868
  bin: 3.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 3094
  bin: 1.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 30247
  bin: 2.25e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 1886
  bin: 1.75e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 6786
  bin: 2.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 747
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13422
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 9.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 5.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 805
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4264
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1237
  bin: 7.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 332
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 218
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1141
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13891
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 632
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 815
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29476
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 265
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 283
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1257
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 1
population: Latino
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: African
population: European (Finnish)
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD

20-50007823-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50007823
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 50007823
    reference: chr 20
allele count: 4
allele frequency: 4.137274777104322e-5
allele num: 96682
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000379330
  ensembl transcript: ENST00000396009
  gene symbol: NFATC2
  hgvsc: ENST00000396009.3:c.*110C>T
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477370
  ensembl transcript: ENST00000609943
  gene symbol: NFATC2
  hgvsc: ENST00000609943.1:c.*110C>T
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000360619
  ensembl transcript: ENST00000371564
  gene symbol: NFATC2
  hgvsc: ENST00000371564.3:c.*210C>T
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477342
  ensembl transcript: ENST00000609507
  gene symbol: NFATC2
  hgvsc: ENST00000609507.1:c.*210C>T
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477142
  ensembl transcript: ENST00000610033
  gene symbol: NFATC2
  hgvsc: ENST00000610033.1:c.*210C>T
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000396471
  ensembl transcript: ENST00000414705
  gene symbol: NFATC2
  hgvsc: ENST00000414705.1:c.*210C>T
  variant of: http://identifiers.org/hgnc/7776
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11436
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1558
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7374
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2623
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 819
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3158
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32155
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 247
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 829
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5027
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 465
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32435
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 810
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 140
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 171
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 549
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 221
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 294
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1434
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1092
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: Latino
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: G
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: DP

20-50007825-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50007825
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 50007825
    reference: chr 20
allele count: 1178
allele frequency: 1.144867533578246e-2
allele num: 102894
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477142
  ensembl transcript: ENST00000610033
  gene symbol: NFATC2
  hgvsc: ENST00000610033.1:c.*208C>T
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477342
  ensembl transcript: ENST00000609507
  gene symbol: NFATC2
  hgvsc: ENST00000609507.1:c.*208C>T
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477370
  ensembl transcript: ENST00000609943
  gene symbol: NFATC2
  hgvsc: ENST00000609943.1:c.*108C>T
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000360619
  ensembl transcript: ENST00000371564
  gene symbol: NFATC2
  hgvsc: ENST00000371564.3:c.*208C>T
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000379330
  ensembl transcript: ENST00000396009
  gene symbol: NFATC2
  hgvsc: ENST00000396009.3:c.*108C>T
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000396471
  ensembl transcript: ENST00000414705
  gene symbol: NFATC2
  hgvsc: ENST00000414705.1:c.*208C>T
  variant of: http://identifiers.org/hgnc/7776
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2054
  bin: 1.25e1
  variant carriers: 66
genotype depth: GenotypeDepth
  all individuals: 3692
  bin: 3.25e1
  variant carriers: 137
genotype depth: GenotypeDepth
  all individuals: 970
  bin: 3.75e1
  variant carriers: 77
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 5.25e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 8625
  bin: 7.5e0
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 34157
  bin: 2.25e1
  variant carriers: 184
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 4.75e1
  variant carriers: 38
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 453
  bin: 4.25e1
  variant carriers: 54
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 5.75e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 6.25e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 9.75e1
  variant carriers: 155
genotype depth: GenotypeDepth
  all individuals: 1291
  bin: 1.75e1
  variant carriers: 126
genotype depth: GenotypeDepth
  all individuals: 8150
  bin: 2.75e1
  variant carriers: 181
genotype quality: GenotypeQuality
  all individuals: 497
  bin: 4.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1503
  bin: 7.75e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 140
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5590
  bin: 6.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 979
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 761
  bin: 3.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 325
  bin: 9.25e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 346
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34740
  bin: 6.25e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 9079
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 388
  bin: 5.25e1
  variant carriers: 4
num of homozygotes: 51
population: Other
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS

20-50007829-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50007829
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 50007829
    reference: chr 20
allele count: 2
allele frequency: 1.872518912441016e-5
allele num: 106808
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477142
  ensembl transcript: ENST00000610033
  gene symbol: NFATC2
  hgvsc: ENST00000610033.1:c.*204C>G
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000360619
  ensembl transcript: ENST00000371564
  gene symbol: NFATC2
  hgvsc: ENST00000371564.3:c.*204C>G
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000396471
  ensembl transcript: ENST00000414705
  gene symbol: NFATC2
  hgvsc: ENST00000414705.1:c.*204C>G
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477342
  ensembl transcript: ENST00000609507
  gene symbol: NFATC2
  hgvsc: ENST00000609507.1:c.*204C>G
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477370
  ensembl transcript: ENST00000609943
  gene symbol: NFATC2
  hgvsc: ENST00000609943.1:c.*104C>G
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000379330
  ensembl transcript: ENST00000396009
  gene symbol: NFATC2
  hgvsc: ENST00000396009.3:c.*104C>G
  variant of: http://identifiers.org/hgnc/7776
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6802
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35563
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1081
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1633
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8766
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4118
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1074
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 491
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1049
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 517
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7159
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 668
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 241
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6103
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 360
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1846
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 734
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 822
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Finnish)
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum

20-50007831-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50007831
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 50007831
    reference: chr 20
allele count: 1
allele frequency: 9.233439825672655e-6
allele num: 108302
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000396471
  ensembl transcript: ENST00000414705
  gene symbol: NFATC2
  hgvsc: ENST00000414705.1:c.*202T>C
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477142
  ensembl transcript: ENST00000610033
  gene symbol: NFATC2
  hgvsc: ENST00000610033.1:c.*202T>C
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477370
  ensembl transcript: ENST00000609943
  gene symbol: NFATC2
  hgvsc: ENST00000609943.1:c.*102T>C
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000379330
  ensembl transcript: ENST00000396009
  gene symbol: NFATC2
  hgvsc: ENST00000396009.3:c.*102T>C
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477342
  ensembl transcript: ENST00000609507
  gene symbol: NFATC2
  hgvsc: ENST00000609507.1:c.*202T>C
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000360619
  ensembl transcript: ENST00000371564
  gene symbol: NFATC2
  hgvsc: ENST00000371564.3:c.*202T>C
  variant of: http://identifiers.org/hgnc/7776
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1014
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1097
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6086
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4347
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1473
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8943
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36094
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 831
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 637
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1099
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 662
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 408
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37153
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 382
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 469
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 508
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 209
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 117
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: East Asian
population: African
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: A
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: BaseQRankSum

http://identifiers.org/exac.variant/20-50007832-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50007832
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 50007832
    reference: chr 20
allele count: 2
allele frequency: 1.83766102504732e-5
allele num: 108834
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000379330
  ensembl transcript: ENST00000396009
  gene symbol: NFATC2
  hgvsc: ENST00000396009.3:c.*101G>T
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477142
  ensembl transcript: ENST00000610033
  gene symbol: NFATC2
  hgvsc: ENST00000610033.1:c.*201G>T
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000396471
  ensembl transcript: ENST00000414705
  gene symbol: NFATC2
  hgvsc: ENST00000414705.1:c.*201G>T
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477370
  ensembl transcript: ENST00000609943
  gene symbol: NFATC2
  hgvsc: ENST00000609943.1:c.*101G>T
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477342
  ensembl transcript: ENST00000609507
  gene symbol: NFATC2
  hgvsc: ENST00000609507.1:c.*201G>T
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000360619
  ensembl transcript: ENST00000371564
  gene symbol: NFATC2
  hgvsc: ENST00000371564.3:c.*201G>T
  variant of: http://identifiers.org/hgnc/7776
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 36259
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 514
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9045
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1131
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 989
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5757
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4447
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1423
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1809
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 807
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 650
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 835
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 153
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 528
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 612
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 370
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1080
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 219
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 664
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Other
population: East Asian
population: Latino
population: African
reference allele: C
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ

20-50007832-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50007832
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 50007832
    reference: chr 20
allele count: 1
allele frequency: 9.1883051252366e-6
allele num: 108834
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477342
  ensembl transcript: ENST00000609507
  gene symbol: NFATC2
  hgvsc: ENST00000609507.1:c.*201G>C
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477370
  ensembl transcript: ENST00000609943
  gene symbol: NFATC2
  hgvsc: ENST00000609943.1:c.*101G>C
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000360619
  ensembl transcript: ENST00000371564
  gene symbol: NFATC2
  hgvsc: ENST00000371564.3:c.*201G>C
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000396471
  ensembl transcript: ENST00000414705
  gene symbol: NFATC2
  hgvsc: ENST00000414705.1:c.*201G>C
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000379330
  ensembl transcript: ENST00000396009
  gene symbol: NFATC2
  hgvsc: ENST00000396009.3:c.*101G>C
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477142
  ensembl transcript: ENST00000610033
  gene symbol: NFATC2
  hgvsc: ENST00000610033.1:c.*201G>C
  variant of: http://identifiers.org/hgnc/7776
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 514
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1131
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5757
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4447
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9045
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1423
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 989
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36259
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 807
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 370
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1882
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 219
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 384
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6109
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 664
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 153
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6254
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 403
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 484
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 612
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD

20-50007833-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50007833
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 50007833
    reference: chr 20
allele count: 1
allele frequency: 9.13575735428467e-6
allele num: 109460
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477142
  ensembl transcript: ENST00000610033
  gene symbol: NFATC2
  hgvsc: ENST00000610033.1:c.*200A>C
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477342
  ensembl transcript: ENST00000609507
  gene symbol: NFATC2
  hgvsc: ENST00000609507.1:c.*200A>C
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000360619
  ensembl transcript: ENST00000371564
  gene symbol: NFATC2
  hgvsc: ENST00000371564.3:c.*200A>C
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000379330
  ensembl transcript: ENST00000396009
  gene symbol: NFATC2
  hgvsc: ENST00000396009.3:c.*100A>C
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477370
  ensembl transcript: ENST00000609943
  gene symbol: NFATC2
  hgvsc: ENST00000609943.1:c.*100A>C
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000396471
  ensembl transcript: ENST00000414705
  gene symbol: NFATC2
  hgvsc: ENST00000414705.1:c.*200A>C
  variant of: http://identifiers.org/hgnc/7776
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 942
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1151
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36438
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9150
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1371
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 511
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5482
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4525
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1907
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 636
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 424
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37521
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 503
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 159
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 643
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1859
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 187
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 838
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1111
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: Latino
population: East Asian
population: South Asian
population: African
population: European (Finnish)
reference allele: T
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: DP

20-50007835-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50007835
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 50007835
    reference: chr 20
allele count: 21
allele frequency: 1.900383696517773e-4
allele num: 110504
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477142
  ensembl transcript: ENST00000610033
  gene symbol: NFATC2
  hgvsc: ENST00000610033.1:c.*198G>A
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000396471
  ensembl transcript: ENST00000414705
  gene symbol: NFATC2
  hgvsc: ENST00000414705.1:c.*198G>A
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477370
  ensembl transcript: ENST00000609943
  gene symbol: NFATC2
  hgvsc: ENST00000609943.1:c.*98G>A
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000379330
  ensembl transcript: ENST00000396009
  gene symbol: NFATC2
  hgvsc: ENST00000396009.3:c.*98G>A
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477342
  ensembl transcript: ENST00000609507
  gene symbol: NFATC2
  hgvsc: ENST00000609507.1:c.*198G>A
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000360619
  ensembl transcript: ENST00000371564
  gene symbol: NFATC2
  hgvsc: ENST00000371564.3:c.*198G>A
  variant of: http://identifiers.org/hgnc/7776
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36457
  bin: 2.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 882
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1230
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1224
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4878
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9498
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 550
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4860
  bin: 3.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 5245
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1935
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 858
  bin: 9.75e1
  variant carriers: 21
genotype quality: GenotypeQuality
  all individuals: 658
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 557
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6390
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1866
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 721
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1107
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 609
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37731
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: European (Non-Finnish)
population: East Asian
population: African
population: European (Finnish)
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS

20-50007836-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50007836
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 50007836
    reference: chr 20
allele count: 11
allele frequency: 9.804620650313748e-5
allele num: 112192
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000360619
  ensembl transcript: ENST00000371564
  gene symbol: NFATC2
  hgvsc: ENST00000371564.3:c.*197C>T
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477142
  ensembl transcript: ENST00000610033
  gene symbol: NFATC2
  hgvsc: ENST00000610033.1:c.*197C>T
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000396471
  ensembl transcript: ENST00000414705
  gene symbol: NFATC2
  hgvsc: ENST00000414705.1:c.*197C>T
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477342
  ensembl transcript: ENST00000609507
  gene symbol: NFATC2
  hgvsc: ENST00000609507.1:c.*197C>T
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000379330
  ensembl transcript: ENST00000396009
  gene symbol: NFATC2
  hgvsc: ENST00000396009.3:c.*97C>T
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477370
  ensembl transcript: ENST00000609943
  gene symbol: NFATC2
  hgvsc: ENST00000609943.1:c.*97C>T
  variant of: http://identifiers.org/hgnc/7776
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1326
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4228
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9670
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5205
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1076
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 573
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 36729
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 781
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 471
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 888
  bin: 9.75e1
  variant carriers: 11
genotype quality: GenotypeQuality
  all individuals: 111
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 482
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 433
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 375
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 590
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6735
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 133
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 518
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1259
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Latino
population: South Asian
population: European (Finnish)
population: African
population: Other
reference allele: G
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum

20-50007842-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50007842
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 50007842
    reference: chr 20
allele count: 1
allele frequency: 8.569127148708632e-6
allele num: 116698
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477370
  ensembl transcript: ENST00000609943
  gene symbol: NFATC2
  hgvsc: ENST00000609943.1:c.*91C>T
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000396471
  ensembl transcript: ENST00000414705
  gene symbol: NFATC2
  hgvsc: ENST00000414705.1:c.*191C>T
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000360619
  ensembl transcript: ENST00000371564
  gene symbol: NFATC2
  hgvsc: ENST00000371564.3:c.*191C>T
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477142
  ensembl transcript: ENST00000610033
  gene symbol: NFATC2
  hgvsc: ENST00000610033.1:c.*191C>T
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477342
  ensembl transcript: ENST00000609507
  gene symbol: NFATC2
  hgvsc: ENST00000609507.1:c.*191C>T
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000379330
  ensembl transcript: ENST00000396009
  gene symbol: NFATC2
  hgvsc: ENST00000396009.3:c.*91C>T
  variant of: http://identifiers.org/hgnc/7776
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6113
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2167
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 548
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1504
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38046
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10115
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 684
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 926
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2347
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 321
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 273
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 512
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2359
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40804
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 256
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 245
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: Other
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: African
reference allele: G
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD

20-50007851-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50007851
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 50007851
    reference: chr 20
allele count: 1
allele frequency: 8.403785064793184e-6
allele num: 118994
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000379330
  ensembl transcript: ENST00000396009
  gene symbol: NFATC2
  hgvsc: ENST00000396009.3:c.*82G>A
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000360619
  ensembl transcript: ENST00000371564
  gene symbol: NFATC2
  hgvsc: ENST00000371564.3:c.*182G>A
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477342
  ensembl transcript: ENST00000609507
  gene symbol: NFATC2
  hgvsc: ENST00000609507.1:c.*182G>A
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477142
  ensembl transcript: ENST00000610033
  gene symbol: NFATC2
  hgvsc: ENST00000610033.1:c.*182G>A
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000396471
  ensembl transcript: ENST00000414705
  gene symbol: NFATC2
  hgvsc: ENST00000414705.1:c.*182G>A
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477370
  ensembl transcript: ENST00000609943
  gene symbol: NFATC2
  hgvsc: ENST00000609943.1:c.*82G>A
  variant of: http://identifiers.org/hgnc/7776
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38113
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 823
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10451
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1045
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6843
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1722
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 177
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 208
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41608
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 172
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2435
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 206
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 232
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1537
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 260
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 229
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Latino
population: African
population: South Asian
population: European (Finnish)
population: Other
reference allele: C
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP

20-50007852-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50007852
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 50007852
    reference: chr 20
allele count: 24
allele frequency: 2.013017513252365e-4
allele num: 119224
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477142
  ensembl transcript: ENST00000610033
  gene symbol: NFATC2
  hgvsc: ENST00000610033.1:c.*181T>C
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477370
  ensembl transcript: ENST00000609943
  gene symbol: NFATC2
  hgvsc: ENST00000609943.1:c.*81T>C
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000396471
  ensembl transcript: ENST00000414705
  gene symbol: NFATC2
  hgvsc: ENST00000414705.1:c.*181T>C
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000360619
  ensembl transcript: ENST00000371564
  gene symbol: NFATC2
  hgvsc: ENST00000371564.3:c.*181T>C
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000379330
  ensembl transcript: ENST00000396009
  gene symbol: NFATC2
  hgvsc: ENST00000396009.3:c.*81T>C
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477342
  ensembl transcript: ENST00000609507
  gene symbol: NFATC2
  hgvsc: ENST00000609507.1:c.*181T>C
  variant of: http://identifiers.org/hgnc/7776
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 848
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1733
  bin: 3.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 968
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10440
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38141
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6887
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2532
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 210
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 174
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 189
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 189
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 153
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 159
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1072
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 156
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 630
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 981
  bin: 9.75e1
  variant carriers: 24
num of homozygotes: 0
population: East Asian
population: Latino
population: Other
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: A
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum

20-50007869-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50007869
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 50007869
    reference: chr 20
allele count: 1
allele frequency: 8.272803984182399e-6
allele num: 120878
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000396471
  ensembl transcript: ENST00000414705
  gene symbol: NFATC2
  hgvsc: ENST00000414705.1:c.*164C>T
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000360619
  ensembl transcript: ENST00000371564
  gene symbol: NFATC2
  hgvsc: ENST00000371564.3:c.*164C>T
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477342
  ensembl transcript: ENST00000609507
  gene symbol: NFATC2
  hgvsc: ENST00000609507.1:c.*164C>T
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477142
  ensembl transcript: ENST00000610033
  gene symbol: NFATC2
  hgvsc: ENST00000610033.1:c.*164C>T
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477370
  ensembl transcript: ENST00000609943
  gene symbol: NFATC2
  hgvsc: ENST00000609943.1:c.*64C>T
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000379330
  ensembl transcript: ENST00000396009
  gene symbol: NFATC2
  hgvsc: ENST00000396009.3:c.*64C>T
  variant of: http://identifiers.org/hgnc/7776
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37804
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2033
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10686
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 518
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7368
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1043
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 709
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2743
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 616
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: European (Finnish)
population: South Asian
population: Latino
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum

20-50007879-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50007879
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 50007879
    reference: chr 20
allele count: 1
allele frequency: 8.247558722618106e-6
allele num: 121248
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000379330
  ensembl transcript: ENST00000396009
  gene symbol: NFATC2
  hgvsc: ENST00000396009.3:c.*54C>T
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477142
  ensembl transcript: ENST00000610033
  gene symbol: NFATC2
  hgvsc: ENST00000610033.1:c.*154C>T
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000360619
  ensembl transcript: ENST00000371564
  gene symbol: NFATC2
  hgvsc: ENST00000371564.3:c.*154C>T
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477370
  ensembl transcript: ENST00000609943
  gene symbol: NFATC2
  hgvsc: ENST00000609943.1:c.*54C>T
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477342
  ensembl transcript: ENST00000609507
  gene symbol: NFATC2
  hgvsc: ENST00000609507.1:c.*154C>T
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000396471
  ensembl transcript: ENST00000414705
  gene symbol: NFATC2
  hgvsc: ENST00000414705.1:c.*154C>T
  variant of: http://identifiers.org/hgnc/7776
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37569
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1127
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10763
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7522
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2125
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1053
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2779
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 740
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8322
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: African
population: East Asian
population: Other
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum

20-50007890-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50007890
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 50007890
    reference: chr 20
allele count: 1
allele frequency: 8.239675686364985e-6
allele num: 121364
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000379330
  ensembl transcript: ENST00000396009
  gene symbol: NFATC2
  hgvsc: ENST00000396009.3:c.*43G>A
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477370
  ensembl transcript: ENST00000609943
  gene symbol: NFATC2
  hgvsc: ENST00000609943.1:c.*43G>A
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477342
  ensembl transcript: ENST00000609507
  gene symbol: NFATC2
  hgvsc: ENST00000609507.1:c.*143G>A
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000396471
  ensembl transcript: ENST00000414705
  gene symbol: NFATC2
  hgvsc: ENST00000414705.1:c.*143G>A
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477142
  ensembl transcript: ENST00000610033
  gene symbol: NFATC2
  hgvsc: ENST00000610033.1:c.*143G>A
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000360619
  ensembl transcript: ENST00000371564
  gene symbol: NFATC2
  hgvsc: ENST00000371564.3:c.*143G>A
  variant of: http://identifiers.org/hgnc/7776
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7572
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37515
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1140
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10803
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2152
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8353
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 645
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2786
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42528
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2760
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Other
reference allele: C
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum

20-50007896-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50007896
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 50007896
    reference: chr 20
allele count: 1
allele frequency: 8.237775141689733e-6
allele num: 121392
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000360619
  ensembl transcript: ENST00000371564
  gene symbol: NFATC2
  hgvsc: ENST00000371564.3:c.*137C>G
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000396471
  ensembl transcript: ENST00000414705
  gene symbol: NFATC2
  hgvsc: ENST00000414705.1:c.*137C>G
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000379330
  ensembl transcript: ENST00000396009
  gene symbol: NFATC2
  hgvsc: ENST00000396009.3:c.*37C>G
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477142
  ensembl transcript: ENST00000610033
  gene symbol: NFATC2
  hgvsc: ENST00000610033.1:c.*137C>G
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477342
  ensembl transcript: ENST00000609507
  gene symbol: NFATC2
  hgvsc: ENST00000609507.1:c.*137C>G
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477370
  ensembl transcript: ENST00000609943
  gene symbol: NFATC2
  hgvsc: ENST00000609943.1:c.*37C>G
  variant of: http://identifiers.org/hgnc/7776
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7580
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10805
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37505
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1151
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2160
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2764
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42566
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8369
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1746
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 740
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: European (Finnish)
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum

20-50007896-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50007896
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 50007896
    reference: chr 20
allele count: 1
allele frequency: 8.237775141689733e-6
allele num: 121392
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000379330
  ensembl transcript: ENST00000396009
  gene symbol: NFATC2
  hgvsc: ENST00000396009.3:c.*37C>T
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477142
  ensembl transcript: ENST00000610033
  gene symbol: NFATC2
  hgvsc: ENST00000610033.1:c.*137C>T
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000396471
  ensembl transcript: ENST00000414705
  gene symbol: NFATC2
  hgvsc: ENST00000414705.1:c.*137C>T
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000360619
  ensembl transcript: ENST00000371564
  gene symbol: NFATC2
  hgvsc: ENST00000371564.3:c.*137C>T
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477370
  ensembl transcript: ENST00000609943
  gene symbol: NFATC2
  hgvsc: ENST00000609943.1:c.*37C>T
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477342
  ensembl transcript: ENST00000609507
  gene symbol: NFATC2
  hgvsc: ENST00000609507.1:c.*137C>T
  variant of: http://identifiers.org/hgnc/7776
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2160
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10805
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7580
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37505
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1151
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2790
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8369
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1053
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 740
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1746
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2764
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Finnish)
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Latino
population: African
reference allele: G
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: VQSLOD

20-50007898-C-CAGA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50007898
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 50007901
    reference: chr 20
allele count: 1
allele frequency: 8.237367996177861e-6
allele num: 121398
alternate allele: CAGA
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477342
  ensembl transcript: ENST00000609507
  gene symbol: NFATC2
  hgvsc: ENST00000609507.1:c.*132_*134dupTCT
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000360619
  ensembl transcript: ENST00000371564
  gene symbol: NFATC2
  hgvsc: ENST00000371564.3:c.*132_*134dupTCT
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477370
  ensembl transcript: ENST00000609943
  gene symbol: NFATC2
  hgvsc: ENST00000609943.1:c.*32_*34dupTCT
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000379330
  ensembl transcript: ENST00000396009
  gene symbol: NFATC2
  hgvsc: ENST00000396009.3:c.*32_*34dupTCT
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477142
  ensembl transcript: ENST00000610033
  gene symbol: NFATC2
  hgvsc: ENST00000610033.1:c.*132_*134dupTCT
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000396471
  ensembl transcript: ENST00000414705
  gene symbol: NFATC2
  hgvsc: ENST00000414705.1:c.*132_*134dupTCT
  variant of: http://identifiers.org/hgnc/7776
canonical: true
consequence: 3' UTR
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7580
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2158
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1155
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37506
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10808
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2763
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2792
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 648
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Latino
population: African
population: Other
reference allele: C
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum

20-50007902-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50007902
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 50007902
    reference: chr 20
allele count: 1
allele frequency: 8.237367996177861e-6
allele num: 121398
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000360619
  ensembl transcript: ENST00000371564
  gene symbol: NFATC2
  hgvsc: ENST00000371564.3:c.*131A>G
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477342
  ensembl transcript: ENST00000609507
  gene symbol: NFATC2
  hgvsc: ENST00000609507.1:c.*131A>G
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000379330
  ensembl transcript: ENST00000396009
  gene symbol: NFATC2
  hgvsc: ENST00000396009.3:c.*31A>G
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477370
  ensembl transcript: ENST00000609943
  gene symbol: NFATC2
  hgvsc: ENST00000609943.1:c.*31A>G
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477142
  ensembl transcript: ENST00000610033
  gene symbol: NFATC2
  hgvsc: ENST00000610033.1:c.*131A>G
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000396471
  ensembl transcript: ENST00000414705
  gene symbol: NFATC2
  hgvsc: ENST00000414705.1:c.*131A>G
  variant of: http://identifiers.org/hgnc/7776
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2158
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 37505
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10808
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1155
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7582
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2761
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2792
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42576
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8367
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: T
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum

http://identifiers.org/exac.variant/20-50007905-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50007905
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 50007905
    reference: chr 20
allele count: 1
allele frequency: 8.237367996177861e-6
allele num: 121398
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477370
  ensembl transcript: ENST00000609943
  gene symbol: NFATC2
  hgvsc: ENST00000609943.1:c.*28T>G
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000360619
  ensembl transcript: ENST00000371564
  gene symbol: NFATC2
  hgvsc: ENST00000371564.3:c.*128T>G
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000379330
  ensembl transcript: ENST00000396009
  gene symbol: NFATC2
  hgvsc: ENST00000396009.3:c.*28T>G
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477342
  ensembl transcript: ENST00000609507
  gene symbol: NFATC2
  hgvsc: ENST00000609507.1:c.*128T>G
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477142
  ensembl transcript: ENST00000610033
  gene symbol: NFATC2
  hgvsc: ENST00000610033.1:c.*128T>G
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000396471
  ensembl transcript: ENST00000414705
  gene symbol: NFATC2
  hgvsc: ENST00000414705.1:c.*128T>G
  variant of: http://identifiers.org/hgnc/7776
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37506
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7586
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1156
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2157
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10805
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 741
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2791
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42581
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 649
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: European (Non-Finnish)
population: African
population: South Asian
population: East Asian
population: European (Finnish)
reference allele: A
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD

20-50007905-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50007905
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 50007905
    reference: chr 20
allele count: 1
allele frequency: 8.237367996177861e-6
allele num: 121398
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477142
  ensembl transcript: ENST00000610033
  gene symbol: NFATC2
  hgvsc: ENST00000610033.1:c.*128T>C
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477370
  ensembl transcript: ENST00000609943
  gene symbol: NFATC2
  hgvsc: ENST00000609943.1:c.*28T>C
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000379330
  ensembl transcript: ENST00000396009
  gene symbol: NFATC2
  hgvsc: ENST00000396009.3:c.*28T>C
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000396471
  ensembl transcript: ENST00000414705
  gene symbol: NFATC2
  hgvsc: ENST00000414705.1:c.*128T>C
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477342
  ensembl transcript: ENST00000609507
  gene symbol: NFATC2
  hgvsc: ENST00000609507.1:c.*128T>C
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000360619
  ensembl transcript: ENST00000371564
  gene symbol: NFATC2
  hgvsc: ENST00000371564.3:c.*128T>C
  variant of: http://identifiers.org/hgnc/7776
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37506
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2157
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7586
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1156
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10805
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1052
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2791
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 741
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42581
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8366
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Other
population: African
population: Latino
population: European (Finnish)
population: East Asian
reference allele: A
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: DP

20-50007910-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50007910
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 50007910
    reference: chr 20
allele count: 2
allele frequency: 1.647446457990115e-5
allele num: 121400
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477370
  ensembl transcript: ENST00000609943
  gene symbol: NFATC2
  hgvsc: ENST00000609943.1:c.*23C>T
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000396471
  ensembl transcript: ENST00000414705
  gene symbol: NFATC2
  hgvsc: ENST00000414705.1:c.*123C>T
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000360619
  ensembl transcript: ENST00000371564
  gene symbol: NFATC2
  hgvsc: ENST00000371564.3:c.*123C>T
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477342
  ensembl transcript: ENST00000609507
  gene symbol: NFATC2
  hgvsc: ENST00000609507.1:c.*123C>T
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000379330
  ensembl transcript: ENST00000396009
  gene symbol: NFATC2
  hgvsc: ENST00000396009.3:c.*23C>T
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477142
  ensembl transcript: ENST00000610033
  gene symbol: NFATC2
  hgvsc: ENST00000610033.1:c.*123C>T
  variant of: http://identifiers.org/hgnc/7776
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2162
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37500
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1155
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10807
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7587
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2761
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8366
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2791
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1052
  bin: 9.75e1
  variant carriers: 2
num of homozygotes: 0
population: Other
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: QD

20-50007918-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50007918
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 50007918
    reference: chr 20
allele count: 2
allele frequency: 1.647392178181938e-5
allele num: 121404
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477342
  ensembl transcript: ENST00000609507
  gene symbol: NFATC2
  hgvsc: ENST00000609507.1:c.*115G>A
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000360619
  ensembl transcript: ENST00000371564
  gene symbol: NFATC2
  hgvsc: ENST00000371564.3:c.*115G>A
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000396471
  ensembl transcript: ENST00000414705
  gene symbol: NFATC2
  hgvsc: ENST00000414705.1:c.*115G>A
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477370
  ensembl transcript: ENST00000609943
  gene symbol: NFATC2
  hgvsc: ENST00000609943.1:c.*15G>A
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000379330
  ensembl transcript: ENST00000396009
  gene symbol: NFATC2
  hgvsc: ENST00000396009.3:c.*15G>A
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477142
  ensembl transcript: ENST00000610033
  gene symbol: NFATC2
  hgvsc: ENST00000610033.1:c.*115G>A
  variant of: http://identifiers.org/hgnc/7776
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7591
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37495
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1153
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2161
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10810
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8365
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 741
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1742
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42589
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1054
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2763
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
reference allele: C
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum

20-50007921-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50007921
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 50007921
    reference: chr 20
allele count: 1
allele frequency: 8.237096588194593e-6
allele num: 121402
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000379330
  ensembl transcript: ENST00000396009
  gene symbol: NFATC2
  hgvsc: ENST00000396009.3:c.*12A>G
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477370
  ensembl transcript: ENST00000609943
  gene symbol: NFATC2
  hgvsc: ENST00000609943.1:c.*12A>G
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477342
  ensembl transcript: ENST00000609507
  gene symbol: NFATC2
  hgvsc: ENST00000609507.1:c.*112A>G
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000396471
  ensembl transcript: ENST00000414705
  gene symbol: NFATC2
  hgvsc: ENST00000414705.1:c.*112A>G
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000360619
  ensembl transcript: ENST00000371564
  gene symbol: NFATC2
  hgvsc: ENST00000371564.3:c.*112A>G
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477142
  ensembl transcript: ENST00000610033
  gene symbol: NFATC2
  hgvsc: ENST00000610033.1:c.*112A>G
  variant of: http://identifiers.org/hgnc/7776
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37491
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10811
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2160
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7595
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 579
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1152
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1052
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2762
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42590
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 648
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Other
population: East Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
reference allele: T
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum

20-50007930-CT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50007930
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 50007929
    reference: chr 20
allele count: 6
allele frequency: 4.942176534545814e-5
allele num: 121404
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477342
  ensembl transcript: ENST00000609507
  gene symbol: NFATC2
  hgvsc: ENST00000609507.1:c.*102delA
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477370
  ensembl transcript: ENST00000609943
  gene symbol: NFATC2
  hgvsc: ENST00000609943.1:c.*2delA
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477142
  ensembl transcript: ENST00000610033
  gene symbol: NFATC2
  hgvsc: ENST00000610033.1:c.*102delA
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000396471
  ensembl transcript: ENST00000414705
  gene symbol: NFATC2
  hgvsc: ENST00000414705.1:c.*102delA
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000379330
  ensembl transcript: ENST00000396009
  gene symbol: NFATC2
  hgvsc: ENST00000396009.3:c.*2delA
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000360619
  ensembl transcript: ENST00000371564
  gene symbol: NFATC2
  hgvsc: ENST00000371564.3:c.*102delA
  variant of: http://identifiers.org/hgnc/7776
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7592
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1153
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37479
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2162
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10815
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2765
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 648
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8365
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2789
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: South Asian
population: Latino
population: East Asian
population: Other
reference allele: CT
site quality: MQ
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD

20-50007936-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50007936
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 50007936
    reference: chr 20
allele count: 21
allele frequency: 1.729761787091035e-4
allele num: 121404
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477370
  ensembl transcript: ENST00000609943
  gene symbol: NFATC2
  hgvsc: ENST00000609943.1:c.2715G>A
  hgvsp: ENST00000609943.1:c.2715G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000379330
  ensembl transcript: ENST00000396009
  gene symbol: NFATC2
  hgvsc: ENST00000396009.3:c.2775G>A
  hgvsp: ENST00000396009.3:c.2775G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000396471
  ensembl transcript: ENST00000414705
  gene symbol: NFATC2
  hgvsc: ENST00000414705.1:c.*97G>A
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477342
  ensembl transcript: ENST00000609507
  gene symbol: NFATC2
  hgvsc: ENST00000609507.1:c.*97G>A
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000360619
  ensembl transcript: ENST00000371564
  gene symbol: NFATC2
  hgvsc: ENST00000371564.3:c.*97G>A
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477142
  ensembl transcript: ENST00000610033
  gene symbol: NFATC2
  hgvsc: ENST00000610033.1:c.*97G>A
  variant of: http://identifiers.org/hgnc/7776
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7600
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10809
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2158
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1154
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 9.75e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37463
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1071
  bin: 9.75e1
  variant carriers: 21
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2787
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2762
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Thr925Thr
num of homozygotes: 0
population: Latino
population: Other
population: South Asian
population: European (Finnish)
population: East Asian
population: African
population: European (Non-Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD

20-50007937-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50007937
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 50007937
    reference: chr 20
allele count: 3
allele frequency: 2.471047559428694e-5
allele num: 121406
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477142
  ensembl transcript: ENST00000610033
  gene symbol: NFATC2
  hgvsc: ENST00000610033.1:c.*96C>T
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477342
  ensembl transcript: ENST00000609507
  gene symbol: NFATC2
  hgvsc: ENST00000609507.1:c.*96C>T
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477370
  ensembl transcript: ENST00000609943
  gene symbol: NFATC2
  hgvsc: ENST00000609943.1:c.2714C>T
  hgvsp: ENSP00000477370.1:p.Thr905Met
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000379330
  ensembl transcript: ENST00000396009
  gene symbol: NFATC2
  hgvsc: ENST00000396009.3:c.2774C>T
  hgvsp: ENSP00000379330.3:p.Thr925Met
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000396471
  ensembl transcript: ENST00000414705
  gene symbol: NFATC2
  hgvsc: ENST00000414705.1:c.*96C>T
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000360619
  ensembl transcript: ENST00000371564
  gene symbol: NFATC2
  hgvsc: ENST00000371564.3:c.*96C>T
  variant of: http://identifiers.org/hgnc/7776
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7598
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10810
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37461
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1156
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2159
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 582
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1054
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 740
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2763
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Thr925Met
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
population: Other
population: European (Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: DP

20-50007948-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50007948
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 50007948
    reference: chr 20
allele count: 1
allele frequency: 8.237367996177861e-6
allele num: 121398
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477342
  ensembl transcript: ENST00000609507
  gene symbol: NFATC2
  hgvsc: ENST00000609507.1:c.*85C>G
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477370
  ensembl transcript: ENST00000609943
  gene symbol: NFATC2
  hgvsc: ENST00000609943.1:c.2703C>G
  hgvsp: ENST00000609943.1:c.2703C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477142
  ensembl transcript: ENST00000610033
  gene symbol: NFATC2
  hgvsc: ENST00000610033.1:c.*85C>G
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000379330
  ensembl transcript: ENST00000396009
  gene symbol: NFATC2
  hgvsc: ENST00000396009.3:c.2763C>G
  hgvsp: ENST00000396009.3:c.2763C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000396471
  ensembl transcript: ENST00000414705
  gene symbol: NFATC2
  hgvsc: ENST00000414705.1:c.*85C>G
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000360619
  ensembl transcript: ENST00000371564
  gene symbol: NFATC2
  hgvsc: ENST00000371564.3:c.*85C>G
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000101096
  ensembl transcript: ENST00000496054
  gene symbol: NFATC2
  hgvsc: ENST00000496054.1:n.618C>G
  variant of: http://identifiers.org/hgnc/7776
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2157
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7595
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1157
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10809
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 37451
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 649
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1744
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2763
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 740
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Ala921Ala
num of homozygotes: 0
population: South Asian
population: African
population: Other
population: Latino
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
reference allele: G
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum

20-50007950-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50007950
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 50007950
    reference: chr 20
allele count: 5
allele frequency: 4.118819711023609e-5
allele num: 121394
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477370
  ensembl transcript: ENST00000609943
  gene symbol: NFATC2
  hgvsc: ENST00000609943.1:c.2701G>A
  hgvsp: ENSP00000477370.1:p.Ala901Thr
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000396471
  ensembl transcript: ENST00000414705
  gene symbol: NFATC2
  hgvsc: ENST00000414705.1:c.*83G>A
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477142
  ensembl transcript: ENST00000610033
  gene symbol: NFATC2
  hgvsc: ENST00000610033.1:c.*83G>A
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477342
  ensembl transcript: ENST00000609507
  gene symbol: NFATC2
  hgvsc: ENST00000609507.1:c.*83G>A
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000360619
  ensembl transcript: ENST00000371564
  gene symbol: NFATC2
  hgvsc: ENST00000371564.3:c.*83G>A
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000379330
  ensembl transcript: ENST00000396009
  gene symbol: NFATC2
  hgvsc: ENST00000396009.3:c.2761G>A
  hgvsp: ENSP00000379330.3:p.Ala921Thr
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000101096
  ensembl transcript: ENST00000496054
  gene symbol: NFATC2
  hgvsc: ENST00000496054.1:n.616G>A
  variant of: http://identifiers.org/hgnc/7776
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7595
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1158
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2157
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37441
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10810
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1057
  bin: 9.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 2786
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Ala921Thr
num of homozygotes: 0
population: Other
population: South Asian
population: African
population: East Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQ

20-50007957-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50007957
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 50007957
    reference: chr 20
allele count: 1
allele frequency: 8.239268352970255e-6
allele num: 121370
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000379330
  ensembl transcript: ENST00000396009
  gene symbol: NFATC2
  hgvsc: ENST00000396009.3:c.2754A>G
  hgvsp: ENST00000396009.3:c.2754A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477342
  ensembl transcript: ENST00000609507
  gene symbol: NFATC2
  hgvsc: ENST00000609507.1:c.*76A>G
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477142
  ensembl transcript: ENST00000610033
  gene symbol: NFATC2
  hgvsc: ENST00000610033.1:c.*76A>G
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477370
  ensembl transcript: ENST00000609943
  gene symbol: NFATC2
  hgvsc: ENST00000609943.1:c.2694A>G
  hgvsp: ENST00000609943.1:c.2694A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000101096
  ensembl transcript: ENST00000496054
  gene symbol: NFATC2
  hgvsc: ENST00000496054.1:n.609A>G
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000360619
  ensembl transcript: ENST00000371564
  gene symbol: NFATC2
  hgvsc: ENST00000371564.3:c.*76A>G
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000396471
  ensembl transcript: ENST00000414705
  gene symbol: NFATC2
  hgvsc: ENST00000414705.1:c.*76A>G
  variant of: http://identifiers.org/hgnc/7776
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10802
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2157
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1159
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7598
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37379
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 740
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Gly918Gly
num of homozygotes: 0
population: East Asian
population: African
population: European (Finnish)
population: Other
population: South Asian
population: Latino
population: European (Non-Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: ClippingRankSum

20-50007976-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50007976
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 50007976
    reference: chr 20
allele count: 1
allele frequency: 8.243071698237632e-6
allele num: 121314
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477342
  ensembl transcript: ENST00000609507
  gene symbol: NFATC2
  hgvsc: ENST00000609507.1:c.*57T>C
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477142
  ensembl transcript: ENST00000610033
  gene symbol: NFATC2
  hgvsc: ENST00000610033.1:c.*57T>C
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000360619
  ensembl transcript: ENST00000371564
  gene symbol: NFATC2
  hgvsc: ENST00000371564.3:c.*57T>C
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000396471
  ensembl transcript: ENST00000414705
  gene symbol: NFATC2
  hgvsc: ENST00000414705.1:c.*57T>C
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477370
  ensembl transcript: ENST00000609943
  gene symbol: NFATC2
  hgvsc: ENST00000609943.1:c.2675T>C
  hgvsp: ENSP00000477370.1:p.Ile892Thr
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000101096
  ensembl transcript: ENST00000496054
  gene symbol: NFATC2
  hgvsc: ENST00000496054.1:n.590T>C
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000379330
  ensembl transcript: ENST00000396009
  gene symbol: NFATC2
  hgvsc: ENST00000396009.3:c.2735T>C
  hgvsp: ENSP00000379330.3:p.Ile912Thr
  variant of: http://identifiers.org/hgnc/7776
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2169
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7576
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10707
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 604
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36964
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1166
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8318
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2794
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1750
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2768
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Ile912Thr
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: South Asian
population: European (Finnish)
population: East Asian
population: African
population: Latino
reference allele: A
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: MQ

20-50007979-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50007979
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 50007979
    reference: chr 20
allele count: 1
allele frequency: 8.247422680412371e-6
allele num: 121250
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477142
  ensembl transcript: ENST00000610033
  gene symbol: NFATC2
  hgvsc: ENST00000610033.1:c.*54T>A
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000379330
  ensembl transcript: ENST00000396009
  gene symbol: NFATC2
  hgvsc: ENST00000396009.3:c.2732T>A
  hgvsp: ENSP00000379330.3:p.Ile911Asn
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000101096
  ensembl transcript: ENST00000496054
  gene symbol: NFATC2
  hgvsc: ENST00000496054.1:n.587T>A
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477370
  ensembl transcript: ENST00000609943
  gene symbol: NFATC2
  hgvsc: ENST00000609943.1:c.2672T>A
  hgvsp: ENSP00000477370.1:p.Ile891Asn
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000396471
  ensembl transcript: ENST00000414705
  gene symbol: NFATC2
  hgvsc: ENST00000414705.1:c.*54T>A
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000360619
  ensembl transcript: ENST00000371564
  gene symbol: NFATC2
  hgvsc: ENST00000371564.3:c.*54T>A
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477342
  ensembl transcript: ENST00000609507
  gene symbol: NFATC2
  hgvsc: ENST00000609507.1:c.*54T>A
  variant of: http://identifiers.org/hgnc/7776
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7574
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36866
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10656
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2166
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 608
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1174
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 445
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1079
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1746
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 652
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2793
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ile911Asn
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: East Asian
population: Latino
population: European (Finnish)
population: South Asian
population: African
reference allele: A
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum

20-50007988-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50007988
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 50007988
    reference: chr 20
allele count: 1
allele frequency: 8.260230295220631e-6
allele num: 121062
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000396471
  ensembl transcript: ENST00000414705
  gene symbol: NFATC2
  hgvsc: ENST00000414705.1:c.*45T>C
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477342
  ensembl transcript: ENST00000609507
  gene symbol: NFATC2
  hgvsc: ENST00000609507.1:c.*45T>C
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477142
  ensembl transcript: ENST00000610033
  gene symbol: NFATC2
  hgvsc: ENST00000610033.1:c.*45T>C
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477370
  ensembl transcript: ENST00000609943
  gene symbol: NFATC2
  hgvsc: ENST00000609943.1:c.2663T>C
  hgvsp: ENSP00000477370.1:p.Val888Ala
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000379330
  ensembl transcript: ENST00000396009
  gene symbol: NFATC2
  hgvsc: ENST00000396009.3:c.2723T>C
  hgvsp: ENSP00000379330.3:p.Val908Ala
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000360619
  ensembl transcript: ENST00000371564
  gene symbol: NFATC2
  hgvsc: ENST00000371564.3:c.*45T>C
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000101096
  ensembl transcript: ENST00000496054
  gene symbol: NFATC2
  hgvsc: ENST00000496054.1:n.578T>C
  variant of: http://identifiers.org/hgnc/7776
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10699
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 673
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7648
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1264
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35827
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2299
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 181
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 759
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1768
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2766
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 674
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Val908Ala
num of homozygotes: 0
population: African
population: Latino
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: A
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum

20-50007990-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50007990
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 50007990
    reference: chr 20
allele count: 1
allele frequency: 8.482771491101573e-6
allele num: 117886
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477142
  ensembl transcript: ENST00000610033
  gene symbol: NFATC2
  hgvsc: ENST00000610033.1:c.*45-2A>T
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000360619
  ensembl transcript: ENST00000371564
  gene symbol: NFATC2
  hgvsc: ENST00000371564.3:c.*45-2A>T
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477342
  ensembl transcript: ENST00000609507
  gene symbol: NFATC2
  hgvsc: ENST00000609507.1:c.*45-2A>T
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000396471
  ensembl transcript: ENST00000414705
  gene symbol: NFATC2
  hgvsc: ENST00000414705.1:c.*45-2A>T
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000101096
  ensembl transcript: ENST00000496054
  gene symbol: NFATC2
  hgvsc: ENST00000496054.1:n.578-2A>T
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477370
  ensembl transcript: ENST00000609943
  gene symbol: NFATC2
  hgvsc: ENST00000609943.1:c.2663-2A>T
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: true
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000379330
  ensembl transcript: ENST00000396009
  gene symbol: NFATC2
  hgvsc: ENST00000396009.3:c.2723-2A>T
  variant of: http://identifiers.org/hgnc/7776
canonical: true
consequence: splice acceptor
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 34123
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10239
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1675
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 700
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 542
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2620
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7534
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1008
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1044
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 405
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 144
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1169
  bin: 2.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 615
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 322
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37722
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 237
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 353
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1481
  bin: 2.25e1
  variant carriers: 0
hgvs: c.2723-2A>T
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Latino
population: Other
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: T
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: QD

http://identifiers.org/exac.variant/20-50007992-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50007992
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 50007992
    reference: chr 20
allele count: 15
allele frequency: 1.405231207374653e-4
allele num: 106744
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000360619
  ensembl transcript: ENST00000371564
  gene symbol: NFATC2
  hgvsc: ENST00000371564.3:c.*45-4G>T
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl transcript: ENST00000496054
  gene symbol: NFATC2
  hgvsc: ENST00000496054.1:n.578-4G>T
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477142
  ensembl transcript: ENST00000610033
  gene symbol: NFATC2
  hgvsc: ENST00000610033.1:c.*45-4G>T
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477342
  ensembl transcript: ENST00000609507
  gene symbol: NFATC2
  hgvsc: ENST00000609507.1:c.*45-4G>T
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000379330
  ensembl transcript: ENST00000396009
  gene symbol: NFATC2
  hgvsc: ENST00000396009.3:c.2723-4G>T
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477370
  ensembl transcript: ENST00000609943
  gene symbol: NFATC2
  hgvsc: ENST00000609943.1:c.2663-4G>T
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000396471
  ensembl transcript: ENST00000414705
  gene symbol: NFATC2
  hgvsc: ENST00000414705.1:c.*45-4G>T
  variant of: http://identifiers.org/hgnc/7776
canonical: true
consequence: splice region
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2475
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1015
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28576
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3019
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 610
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 836
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1459
  bin: 5.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 6798
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8590
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1195
  bin: 6.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1958
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1652
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2244
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 802
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2040
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 793
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 680
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 757
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1307
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1097
  bin: 3.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 557
  bin: 1.25e1
  variant carriers: 1
hgvs: c.2723-4G>T
num of homozygotes: 0
population: Other
population: Latino
population: European (Finnish)
population: South Asian
population: African
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: VQSLOD

20-50007992-CAAAAG-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50007992
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 50007987
    reference: chr 20
allele count: 1
allele frequency: 9.368208049164355e-6
allele num: 106744
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477370
  ensembl transcript: ENST00000609943
  gene symbol: NFATC2
  hgvsc: ENST00000609943.1:c.2663-9_2663-5delCTTTT
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000360619
  ensembl transcript: ENST00000371564
  gene symbol: NFATC2
  hgvsc: ENST00000371564.3:c.*45-9_*45-5delCTTTT
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477142
  ensembl transcript: ENST00000610033
  gene symbol: NFATC2
  hgvsc: ENST00000610033.1:c.*45-9_*45-5delCTTTT
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl transcript: ENST00000496054
  gene symbol: NFATC2
  hgvsc: ENST00000496054.1:n.578-9_578-5delCTTTT
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000379330
  ensembl transcript: ENST00000396009
  gene symbol: NFATC2
  hgvsc: ENST00000396009.3:c.2723-9_2723-5delCTTTT
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000396471
  ensembl transcript: ENST00000414705
  gene symbol: NFATC2
  hgvsc: ENST00000414705.1:c.*45-9_*45-5delCTTTT
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477342
  ensembl transcript: ENST00000609507
  gene symbol: NFATC2
  hgvsc: ENST00000609507.1:c.*45-9_*45-5delCTTTT
  variant of: http://identifiers.org/hgnc/7776
canonical: true
consequence: splice region
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1652
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6798
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1015
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28576
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1195
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3019
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1958
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1459
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 836
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2475
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8590
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 610
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1044
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 757
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 793
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 925
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 680
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 505
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 802
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 546
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 557
  bin: 1.25e1
  variant carriers: 0
hgvs: c.2723-9_2723-5delCTTTT
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Latino
population: East Asian
population: African
reference allele: CAAAAG
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD

http://identifiers.org/exac.variant/20-50007992-C-CAA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50007992
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 50007994
    reference: chr 20
allele count: 2
allele frequency: 1.873641609832871e-5
allele num: 106744
alternate allele: CAA
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477370
  ensembl transcript: ENST00000609943
  gene symbol: NFATC2
  hgvsc: ENST00000609943.1:c.2663-6_2663-5dupTT
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl transcript: ENST00000496054
  gene symbol: NFATC2
  hgvsc: ENST00000496054.1:n.578-6_578-5dupTT
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000396471
  ensembl transcript: ENST00000414705
  gene symbol: NFATC2
  hgvsc: ENST00000414705.1:c.*45-6_*45-5dupTT
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000379330
  ensembl transcript: ENST00000396009
  gene symbol: NFATC2
  hgvsc: ENST00000396009.3:c.2723-6_2723-5dupTT
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000360619
  ensembl transcript: ENST00000371564
  gene symbol: NFATC2
  hgvsc: ENST00000371564.3:c.*45-6_*45-5dupTT
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477342
  ensembl transcript: ENST00000609507
  gene symbol: NFATC2
  hgvsc: ENST00000609507.1:c.*45-6_*45-5dupTT
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477142
  ensembl transcript: ENST00000610033
  gene symbol: NFATC2
  hgvsc: ENST00000610033.1:c.*45-6_*45-5dupTT
  variant of: http://identifiers.org/hgnc/7776
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1459
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3019
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1195
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1015
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8590
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1958
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28576
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2475
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6798
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 836
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1652
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 610
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31492
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1044
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2040
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 793
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 623
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 557
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2013
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 819
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 802
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 757
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: East Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
reference allele: C
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ

20-50007997-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50007997
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 50007997
    reference: chr 20
allele count: 102
allele frequency: 1.225284097734426e-3
allele num: 83246
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000379330
  ensembl transcript: ENST00000396009
  gene symbol: NFATC2
  hgvsc: ENST00000396009.3:c.2723-9C>T
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477142
  ensembl transcript: ENST00000610033
  gene symbol: NFATC2
  hgvsc: ENST00000610033.1:c.*45-9C>T
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477342
  ensembl transcript: ENST00000609507
  gene symbol: NFATC2
  hgvsc: ENST00000609507.1:c.*45-9C>T
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl transcript: ENST00000496054
  gene symbol: NFATC2
  hgvsc: ENST00000496054.1:n.578-9C>T
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000360619
  ensembl transcript: ENST00000371564
  gene symbol: NFATC2
  hgvsc: ENST00000371564.3:c.*45-9C>T
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477370
  ensembl transcript: ENST00000609943
  gene symbol: NFATC2
  hgvsc: ENST00000609943.1:c.2663-9C>T
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000396471
  ensembl transcript: ENST00000414705
  gene symbol: NFATC2
  hgvsc: ENST00000414705.1:c.*45-9C>T
  variant of: http://identifiers.org/hgnc/7776
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 640
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3245
  bin: 5.25e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 3453
  bin: 3.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 2471
  bin: 6.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5334
  bin: 3.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 18108
  bin: 2.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 3381
  bin: 4.25e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 5975
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 867
  bin: 8.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1287
  bin: 8.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3115
  bin: 5.75e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 672
  bin: 9.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2058
  bin: 7.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 1714
  bin: 7.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 2794
  bin: 6.25e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 3353
  bin: 4.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 1554
  bin: 9.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 903
  bin: 5.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 1543
  bin: 7.5e0
  variant carriers: 13
genotype quality: GenotypeQuality
  all individuals: 1056
  bin: 9.75e1
  variant carriers: 17
genotype quality: GenotypeQuality
  all individuals: 1143
  bin: 1.75e1
  variant carriers: 19
genotype quality: GenotypeQuality
  all individuals: 1279
  bin: 7.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 4325
  bin: 2.25e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 1094
  bin: 1.25e1
  variant carriers: 16
genotype quality: GenotypeQuality
  all individuals: 890
  bin: 8.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2011
  bin: 2.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 19485
  bin: 6.25e1
  variant carriers: 3
num of homozygotes: 0
population: African
population: European (Finnish)
population: South Asian
population: Latino
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP

20-50007999-AAAG-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50007999
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 50007996
    reference: chr 20
allele count: 4
allele frequency: 3.376610220999139e-5
allele num: 118462
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000396471
  ensembl transcript: ENST00000414705
  gene symbol: NFATC2
  hgvsc: ENST00000414705.1:c.*45-14_*45-12delCTT
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477370
  ensembl transcript: ENST00000609943
  gene symbol: NFATC2
  hgvsc: ENST00000609943.1:c.2663-14_2663-12delCTT
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477342
  ensembl transcript: ENST00000609507
  gene symbol: NFATC2
  hgvsc: ENST00000609507.1:c.*45-14_*45-12delCTT
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000379330
  ensembl transcript: ENST00000396009
  gene symbol: NFATC2
  hgvsc: ENST00000396009.3:c.2723-14_2723-12delCTT
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000360619
  ensembl transcript: ENST00000371564
  gene symbol: NFATC2
  hgvsc: ENST00000371564.3:c.*45-14_*45-12delCTT
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477142
  ensembl transcript: ENST00000610033
  gene symbol: NFATC2
  hgvsc: ENST00000610033.1:c.*45-14_*45-12delCTT
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl transcript: ENST00000496054
  gene symbol: NFATC2
  hgvsc: ENST00000496054.1:n.578-14_578-12delCTT
  variant of: http://identifiers.org/hgnc/7776
canonical: true
consequence: intron
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4101
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3940
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1382
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3416
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 17993
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2788
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4284
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6439
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 831
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5876
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4246
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 503
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 534
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 886
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2033
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2527
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6201
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 370
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2394
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 125
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1199
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23143
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1253
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 388
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
population: Other
population: South Asian
population: European (Finnish)
reference allele: AAAG
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum

20-50008001-AGAG-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50008001
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 50007998
    reference: chr 20
allele count: 46
allele frequency: 4.002227326512146e-4
allele num: 114936
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000360619
  ensembl transcript: ENST00000371564
  gene symbol: NFATC2
  hgvsc: ENST00000371564.3:c.*45-16_*45-14delCTC
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000379330
  ensembl transcript: ENST00000396009
  gene symbol: NFATC2
  hgvsc: ENST00000396009.3:c.2723-16_2723-14delCTC
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477342
  ensembl transcript: ENST00000609507
  gene symbol: NFATC2
  hgvsc: ENST00000609507.1:c.*45-16_*45-14delCTC
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl transcript: ENST00000496054
  gene symbol: NFATC2
  hgvsc: ENST00000496054.1:n.578-16_578-14delCTC
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477370
  ensembl transcript: ENST00000609943
  gene symbol: NFATC2
  hgvsc: ENST00000609943.1:c.2663-16_2663-14delCTC
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000396471
  ensembl transcript: ENST00000414705
  gene symbol: NFATC2
  hgvsc: ENST00000414705.1:c.*45-16_*45-14delCTC
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477142
  ensembl transcript: ENST00000610033
  gene symbol: NFATC2
  hgvsc: ENST00000610033.1:c.*45-16_*45-14delCTC
  variant of: http://identifiers.org/hgnc/7776
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 3504
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6397
  bin: 2.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 4200
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5918
  bin: 3.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 2124
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4240
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2910
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 905
  bin: 1.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 4175
  bin: 3.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 608
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 17058
  bin: 2.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 594
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1496
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 935
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 1.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 4002
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20155
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 856
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 456
  bin: 5.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 697
  bin: 4.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 2427
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5811
  bin: 2.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2960
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 367
  bin: 1.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2280
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1650
  bin: 7.5e0
  variant carriers: 1
num of homozygotes: 0
population: Other
population: East Asian
population: Latino
population: African
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: AGAG
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: ClippingRankSum

20-50008002-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50008002
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 50008002
    reference: chr 20
allele count: 1
allele frequency: 9.147959090326949e-6
allele num: 109314
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477370
  ensembl transcript: ENST00000609943
  gene symbol: NFATC2
  hgvsc: ENST00000609943.1:c.2663-14C>T
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000360619
  ensembl transcript: ENST00000371564
  gene symbol: NFATC2
  hgvsc: ENST00000371564.3:c.*45-14C>T
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477142
  ensembl transcript: ENST00000610033
  gene symbol: NFATC2
  hgvsc: ENST00000610033.1:c.*45-14C>T
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl transcript: ENST00000496054
  gene symbol: NFATC2
  hgvsc: ENST00000496054.1:n.578-14C>T
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000379330
  ensembl transcript: ENST00000396009
  gene symbol: NFATC2
  hgvsc: ENST00000396009.3:c.2723-14C>T
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477342
  ensembl transcript: ENST00000609507
  gene symbol: NFATC2
  hgvsc: ENST00000609507.1:c.*45-14C>T
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000396471
  ensembl transcript: ENST00000414705
  gene symbol: NFATC2
  hgvsc: ENST00000414705.1:c.*45-14C>T
  variant of: http://identifiers.org/hgnc/7776
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16315
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5943
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3484
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4010
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6251
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 511
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 868
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4213
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4326
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4281
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2889
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2157
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 631
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1538
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 687
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 986
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18300
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1343
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 445
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1941
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2682
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1054
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5203
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 387
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2325
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2040
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: Other
population: European (Finnish)
population: South Asian
population: African
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum

20-50008003-A-AG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50008003
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 50008004
    reference: chr 20
allele count: 7
allele frequency: 6.976419701409237e-5
allele num: 100338
alternate allele: AG
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477142
  ensembl transcript: ENST00000610033
  gene symbol: NFATC2
  hgvsc: ENST00000610033.1:c.*45-16dupC
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477342
  ensembl transcript: ENST00000609507
  gene symbol: NFATC2
  hgvsc: ENST00000609507.1:c.*45-16dupC
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl transcript: ENST00000496054
  gene symbol: NFATC2
  hgvsc: ENST00000496054.1:n.578-16dupC
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000379330
  ensembl transcript: ENST00000396009
  gene symbol: NFATC2
  hgvsc: ENST00000396009.3:c.2723-16dupC
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477370
  ensembl transcript: ENST00000609943
  gene symbol: NFATC2
  hgvsc: ENST00000609943.1:c.2663-16dupC
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000360619
  ensembl transcript: ENST00000371564
  gene symbol: NFATC2
  hgvsc: ENST00000371564.3:c.*45-16dupC
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000396471
  ensembl transcript: ENST00000414705
  gene symbol: NFATC2
  hgvsc: ENST00000414705.1:c.*45-16dupC
  variant of: http://identifiers.org/hgnc/7776
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 534
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1534
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3981
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4355
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5906
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 629
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 970
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2156
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16152
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6237
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3463
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4313
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2919
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 885
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4339
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 746
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 622
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2942
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4613
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1438
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4380
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17601
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 973
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1136
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1835
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4389
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: Other
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
reference allele: A
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD

20-50008003-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50008003
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 50008003
    reference: chr 20
allele count: 4
allele frequency: 3.986525543662421e-5
allele num: 100338
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477342
  ensembl transcript: ENST00000609507
  gene symbol: NFATC2
  hgvsc: ENST00000609507.1:c.*45-15T>C
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000396471
  ensembl transcript: ENST00000414705
  gene symbol: NFATC2
  hgvsc: ENST00000414705.1:c.*45-15T>C
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl transcript: ENST00000496054
  gene symbol: NFATC2
  hgvsc: ENST00000496054.1:n.578-15T>C
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000379330
  ensembl transcript: ENST00000396009
  gene symbol: NFATC2
  hgvsc: ENST00000396009.3:c.2723-15T>C
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477370
  ensembl transcript: ENST00000609943
  gene symbol: NFATC2
  hgvsc: ENST00000609943.1:c.2663-15T>C
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477142
  ensembl transcript: ENST00000610033
  gene symbol: NFATC2
  hgvsc: ENST00000610033.1:c.*45-15T>C
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000360619
  ensembl transcript: ENST00000371564
  gene symbol: NFATC2
  hgvsc: ENST00000371564.3:c.*45-15T>C
  variant of: http://identifiers.org/hgnc/7776
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 1534
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16152
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3463
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2919
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2156
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6237
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4313
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4339
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 885
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 534
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4355
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5906
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 629
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 746
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3981
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 970
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1438
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1242
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1962
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1136
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 622
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4613
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4389
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 973
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1809
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2942
  bin: 7.5e0
  variant carriers: 3
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: African
population: European (Non-Finnish)
population: Latino
population: South Asian
population: Other
reference allele: A
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum

20-50008004-G-GGA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50008004
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 50008006
    reference: chr 20
allele count: 1
allele frequency: 9.84697796246332e-6
allele num: 101554
alternate allele: GGA
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477370
  ensembl transcript: ENST00000609943
  gene symbol: NFATC2
  hgvsc: ENST00000609943.1:c.2663-18_2663-17dupTC
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477142
  ensembl transcript: ENST00000610033
  gene symbol: NFATC2
  hgvsc: ENST00000610033.1:c.*45-18_*45-17dupTC
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000360619
  ensembl transcript: ENST00000371564
  gene symbol: NFATC2
  hgvsc: ENST00000371564.3:c.*45-18_*45-17dupTC
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000379330
  ensembl transcript: ENST00000396009
  gene symbol: NFATC2
  hgvsc: ENST00000396009.3:c.2723-18_2723-17dupTC
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477342
  ensembl transcript: ENST00000609507
  gene symbol: NFATC2
  hgvsc: ENST00000609507.1:c.*45-18_*45-17dupTC
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000396471
  ensembl transcript: ENST00000414705
  gene symbol: NFATC2
  hgvsc: ENST00000414705.1:c.*45-18_*45-17dupTC
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl transcript: ENST00000496054
  gene symbol: NFATC2
  hgvsc: ENST00000496054.1:n.578-18_578-17dupTC
  variant of: http://identifiers.org/hgnc/7776
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 556
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5876
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4435
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 914
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4593
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 896
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4416
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15594
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2104
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2896
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3517
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 771
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4188
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1490
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6115
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 740
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1573
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17285
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1554
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5026
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6080
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2923
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1071
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1546
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3292
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Latino
population: South Asian
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: MQ

20-50008004-GGA-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50008004
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 50008002
    reference: chr 20
allele count: 21
allele frequency: 2.067865372117297e-4
allele num: 101554
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477342
  ensembl transcript: ENST00000609507
  gene symbol: NFATC2
  hgvsc: ENST00000609507.1:c.*45-18_*45-17delTC
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl transcript: ENST00000496054
  gene symbol: NFATC2
  hgvsc: ENST00000496054.1:n.578-18_578-17delTC
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000396471
  ensembl transcript: ENST00000414705
  gene symbol: NFATC2
  hgvsc: ENST00000414705.1:c.*45-18_*45-17delTC
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477142
  ensembl transcript: ENST00000610033
  gene symbol: NFATC2
  hgvsc: ENST00000610033.1:c.*45-18_*45-17delTC
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000360619
  ensembl transcript: ENST00000371564
  gene symbol: NFATC2
  hgvsc: ENST00000371564.3:c.*45-18_*45-17delTC
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477370
  ensembl transcript: ENST00000609943
  gene symbol: NFATC2
  hgvsc: ENST00000609943.1:c.2663-18_2663-17delTC
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000379330
  ensembl transcript: ENST00000396009
  gene symbol: NFATC2
  hgvsc: ENST00000396009.3:c.2723-18_2723-17delTC
  variant of: http://identifiers.org/hgnc/7776
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 15594
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 4188
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4416
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3517
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1490
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 556
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 771
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 896
  bin: 1.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 6115
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4593
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2104
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4435
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 5876
  bin: 3.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 7.5e0
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 914
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2896
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1196
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1573
  bin: 3.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 2923
  bin: 1.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 740
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3292
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 17285
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1755
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2798
  bin: 7.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 1296
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2876
  bin: 2.25e1
  variant carriers: 2
num of homozygotes: 0
population: South Asian
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: GGA
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum

20-50008005-GA-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50008005
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 50008004
    reference: chr 20
allele count: 28
allele frequency: 2.714388196289043e-4
allele num: 103154
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl transcript: ENST00000496054
  gene symbol: NFATC2
  hgvsc: ENST00000496054.1:n.578-18delT
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477370
  ensembl transcript: ENST00000609943
  gene symbol: NFATC2
  hgvsc: ENST00000609943.1:c.2663-18delT
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000396471
  ensembl transcript: ENST00000414705
  gene symbol: NFATC2
  hgvsc: ENST00000414705.1:c.*45-18delT
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000379330
  ensembl transcript: ENST00000396009
  gene symbol: NFATC2
  hgvsc: ENST00000396009.3:c.2723-18delT
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477142
  ensembl transcript: ENST00000610033
  gene symbol: NFATC2
  hgvsc: ENST00000610033.1:c.*45-18delT
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477342
  ensembl transcript: ENST00000609507
  gene symbol: NFATC2
  hgvsc: ENST00000609507.1:c.*45-18delT
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000360619
  ensembl transcript: ENST00000371564
  gene symbol: NFATC2
  hgvsc: ENST00000371564.3:c.*45-18delT
  variant of: http://identifiers.org/hgnc/7776
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 4620
  bin: 4.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 774
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4441
  bin: 4.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 900
  bin: 1.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 6104
  bin: 2.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4452
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1488
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2894
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5841
  bin: 3.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 4207
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2111
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15594
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3554
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 927
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1433
  bin: 4.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 842
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2309
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2829
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1542
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3529
  bin: 2.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1333
  bin: 5.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 384
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1674
  bin: 1.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 1333
  bin: 2.75e1
  variant carriers: 2
num of homozygotes: 0
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Other
reference allele: GA
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: MQ
site quality: QD

20-50008006-A-AG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50008006
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 50008007
    reference: chr 20
allele count: 38113
allele frequency: 3.591026438276141e-1
allele num: 106134
alternate allele: AG
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477342
  ensembl transcript: ENST00000609507
  gene symbol: NFATC2
  hgvsc: ENST00000609507.1:c.*45-19dupC
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477370
  ensembl transcript: ENST00000609943
  gene symbol: NFATC2
  hgvsc: ENST00000609943.1:c.2663-19dupC
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000379330
  ensembl transcript: ENST00000396009
  gene symbol: NFATC2
  hgvsc: ENST00000396009.3:c.2723-19dupC
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl transcript: ENST00000496054
  gene symbol: NFATC2
  hgvsc: ENST00000496054.1:n.578-19dupC
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477142
  ensembl transcript: ENST00000610033
  gene symbol: NFATC2
  hgvsc: ENST00000610033.1:c.*45-19dupC
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000396471
  ensembl transcript: ENST00000414705
  gene symbol: NFATC2
  hgvsc: ENST00000414705.1:c.*45-19dupC
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000360619
  ensembl transcript: ENST00000371564
  gene symbol: NFATC2
  hgvsc: ENST00000371564.3:c.*45-19dupC
  variant of: http://identifiers.org/hgnc/7776
canonical: true
consequence: intron
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 10681
  bin: 2.25e1
  variant carriers: 3877
genotype depth: GenotypeDepth
  all individuals: 6928
  bin: 3.25e1
  variant carriers: 4633
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 8.75e1
  variant carriers: 137
genotype depth: GenotypeDepth
  all individuals: 3213
  bin: 1.75e1
  variant carriers: 2784
genotype depth: GenotypeDepth
  all individuals: 2068
  bin: 1.25e1
  variant carriers: 1725
genotype depth: GenotypeDepth
  all individuals: 604
  bin: 7.75e1
  variant carriers: 300
genotype depth: GenotypeDepth
  all individuals: 6968
  bin: 2.75e1
  variant carriers: 4337
genotype depth: GenotypeDepth
  all individuals: 5423
  bin: 4.25e1
  variant carriers: 3937
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 8.25e1
  variant carriers: 194
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 2.5e0
  variant carriers: 113
genotype depth: GenotypeDepth
  all individuals: 4624
  bin: 4.75e1
  variant carriers: 3209
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 9.25e1
  variant carriers: 107
genotype depth: GenotypeDepth
  all individuals: 3896
  bin: 5.25e1
  variant carriers: 2516
genotype depth: GenotypeDepth
  all individuals: 2863
  bin: 5.75e1
  variant carriers: 1746
genotype depth: GenotypeDepth
  all individuals: 1409
  bin: 6.75e1
  variant carriers: 724
genotype depth: GenotypeDepth
  all individuals: 5948
  bin: 3.75e1
  variant carriers: 4405
genotype depth: GenotypeDepth
  all individuals: 899
  bin: 7.25e1
  variant carriers: 430
genotype depth: GenotypeDepth
  all individuals: 874
  bin: 7.5e0
  variant carriers: 677
genotype depth: GenotypeDepth
  all individuals: 2152
  bin: 6.25e1
  variant carriers: 1209
genotype depth: GenotypeDepth
  all individuals: 698
  bin: 9.75e1
  variant carriers: 469
genotype quality: GenotypeQuality
  all individuals: 29985
  bin: 9.75e1
  variant carriers: 26819
genotype quality: GenotypeQuality
  all individuals: 810
  bin: 8.75e1
  variant carriers: 333
genotype quality: GenotypeQuality
  all individuals: 3413
  bin: 2.5e0
  variant carriers: 668
genotype quality: GenotypeQuality
  all individuals: 1034
  bin: 1.25e1
  variant carriers: 786
genotype quality: GenotypeQuality
  all individuals: 1010
  bin: 1.75e1
  variant carriers: 727
genotype quality: GenotypeQuality
  all individuals: 1002
  bin: 4.75e1
  variant carriers: 558
genotype quality: GenotypeQuality
  all individuals: 987
  bin: 4.25e1
  variant carriers: 616
genotype quality: GenotypeQuality
  all individuals: 797
  bin: 5.75e1
  variant carriers: 479
genotype quality: GenotypeQuality
  all individuals: 1127
  bin: 2.75e1
  variant carriers: 709
genotype quality: GenotypeQuality
  all individuals: 7772
  bin: 6.25e1
  variant carriers: 490
num of homozygotes: 4103
population: Latino
population: South Asian
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
population: Other
reference allele: A
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: QD

20-50008006-A-AGG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50008006
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 50008008
    reference: chr 20
allele count: 156
allele frequency: 1.469840013567754e-3
allele num: 106134
alternate allele: AGG
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477370
  ensembl transcript: ENST00000609943
  gene symbol: NFATC2
  hgvsc: ENST00000609943.1:c.2663-20_2663-19dupCC
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl transcript: ENST00000496054
  gene symbol: NFATC2
  hgvsc: ENST00000496054.1:n.578-20_578-19dupCC
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000396471
  ensembl transcript: ENST00000414705
  gene symbol: NFATC2
  hgvsc: ENST00000414705.1:c.*45-20_*45-19dupCC
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000360619
  ensembl transcript: ENST00000371564
  gene symbol: NFATC2
  hgvsc: ENST00000371564.3:c.*45-20_*45-19dupCC
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477342
  ensembl transcript: ENST00000609507
  gene symbol: NFATC2
  hgvsc: ENST00000609507.1:c.*45-20_*45-19dupCC
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000379330
  ensembl transcript: ENST00000396009
  gene symbol: NFATC2
  hgvsc: ENST00000396009.3:c.2723-20_2723-19dupCC
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477142
  ensembl transcript: ENST00000610033
  gene symbol: NFATC2
  hgvsc: ENST00000610033.1:c.*45-20_*45-19dupCC
  variant of: http://identifiers.org/hgnc/7776
canonical: true
consequence: intron
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 3896
  bin: 5.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 10681
  bin: 2.25e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 1409
  bin: 6.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 4624
  bin: 4.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 8.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2068
  bin: 1.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 2863
  bin: 5.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 6968
  bin: 2.75e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 874
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 899
  bin: 7.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2152
  bin: 6.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 6928
  bin: 3.25e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 604
  bin: 7.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 8.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 5423
  bin: 4.25e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 698
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3213
  bin: 1.75e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 5948
  bin: 3.75e1
  variant carriers: 15
genotype quality: GenotypeQuality
  all individuals: 1127
  bin: 2.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 855
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 797
  bin: 5.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1110
  bin: 3.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 979
  bin: 5.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 1034
  bin: 1.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 810
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1010
  bin: 1.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 3413
  bin: 2.5e0
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 7772
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Latino
population: East Asian
population: Other
reference allele: A
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: MQ

20-50008006-A-AGGGG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50008006
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 50008010
    reference: chr 20
allele count: 3
allele frequency: 2.826615410707219e-5
allele num: 106134
alternate allele: AGGGG
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477342
  ensembl transcript: ENST00000609507
  gene symbol: NFATC2
  hgvsc: ENST00000609507.1:c.*45-22_*45-19dupCCCC
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000379330
  ensembl transcript: ENST00000396009
  gene symbol: NFATC2
  hgvsc: ENST00000396009.3:c.2723-22_2723-19dupCCCC
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000360619
  ensembl transcript: ENST00000371564
  gene symbol: NFATC2
  hgvsc: ENST00000371564.3:c.*45-22_*45-19dupCCCC
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000396471
  ensembl transcript: ENST00000414705
  gene symbol: NFATC2
  hgvsc: ENST00000414705.1:c.*45-22_*45-19dupCCCC
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477142
  ensembl transcript: ENST00000610033
  gene symbol: NFATC2
  hgvsc: ENST00000610033.1:c.*45-22_*45-19dupCCCC
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477370
  ensembl transcript: ENST00000609943
  gene symbol: NFATC2
  hgvsc: ENST00000609943.1:c.2663-22_2663-19dupCCCC
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl transcript: ENST00000496054
  gene symbol: NFATC2
  hgvsc: ENST00000496054.1:n.578-22_578-19dupCCCC
  variant of: http://identifiers.org/hgnc/7776
canonical: true
consequence: intron
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 874
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3213
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2152
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4624
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5423
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6928
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 899
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10681
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1409
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5948
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3896
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 604
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2068
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 698
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6968
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2863
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1127
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 810
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1010
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7772
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2190
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1256
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1299
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1120
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3413
  bin: 2.5e0
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 29985
  bin: 9.75e1
  variant carriers: 2
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: African
population: East Asian
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: A
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff

20-50008006-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50008006
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 50008006
    reference: chr 20
allele count: 203
allele frequency: 1.912676427911885e-3
allele num: 106134
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477342
  ensembl transcript: ENST00000609507
  gene symbol: NFATC2
  hgvsc: ENST00000609507.1:c.*45-18T>C
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000396471
  ensembl transcript: ENST00000414705
  gene symbol: NFATC2
  hgvsc: ENST00000414705.1:c.*45-18T>C
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477370
  ensembl transcript: ENST00000609943
  gene symbol: NFATC2
  hgvsc: ENST00000609943.1:c.2663-18T>C
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000379330
  ensembl transcript: ENST00000396009
  gene symbol: NFATC2
  hgvsc: ENST00000396009.3:c.2723-18T>C
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000360619
  ensembl transcript: ENST00000371564
  gene symbol: NFATC2
  hgvsc: ENST00000371564.3:c.*45-18T>C
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477142
  ensembl transcript: ENST00000610033
  gene symbol: NFATC2
  hgvsc: ENST00000610033.1:c.*45-18T>C
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl transcript: ENST00000496054
  gene symbol: NFATC2
  hgvsc: ENST00000496054.1:n.578-18T>C
  variant of: http://identifiers.org/hgnc/7776
canonical: true
consequence: intron
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 2863
  bin: 5.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6968
  bin: 2.75e1
  variant carriers: 32
genotype depth: GenotypeDepth
  all individuals: 604
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2068
  bin: 1.25e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 2152
  bin: 6.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1409
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3213
  bin: 1.75e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 10681
  bin: 2.25e1
  variant carriers: 34
genotype depth: GenotypeDepth
  all individuals: 6928
  bin: 3.25e1
  variant carriers: 27
genotype depth: GenotypeDepth
  all individuals: 874
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 5948
  bin: 3.75e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 4624
  bin: 4.75e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 899
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3896
  bin: 5.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 5423
  bin: 4.25e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 698
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1299
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1256
  bin: 7.75e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 1010
  bin: 1.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 1142
  bin: 3.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 810
  bin: 8.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 2190
  bin: 6.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 1120
  bin: 7.5e0
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 1034
  bin: 1.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1110
  bin: 3.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1002
  bin: 4.75e1
  variant carriers: 5
num of homozygotes: 1
population: Latino
population: European (Finnish)
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: FS
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum

20-50008006-AG-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50008006
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 50008005
    reference: chr 20
allele count: 473
allele frequency: 4.456630297548382e-3
allele num: 106134
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477342
  ensembl transcript: ENST00000609507
  gene symbol: NFATC2
  hgvsc: ENST00000609507.1:c.*45-19delC
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477142
  ensembl transcript: ENST00000610033
  gene symbol: NFATC2
  hgvsc: ENST00000610033.1:c.*45-19delC
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000379330
  ensembl transcript: ENST00000396009
  gene symbol: NFATC2
  hgvsc: ENST00000396009.3:c.2723-19delC
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000396471
  ensembl transcript: ENST00000414705
  gene symbol: NFATC2
  hgvsc: ENST00000414705.1:c.*45-19delC
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl transcript: ENST00000496054
  gene symbol: NFATC2
  hgvsc: ENST00000496054.1:n.578-19delC
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000360619
  ensembl transcript: ENST00000371564
  gene symbol: NFATC2
  hgvsc: ENST00000371564.3:c.*45-19delC
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477370
  ensembl transcript: ENST00000609943
  gene symbol: NFATC2
  hgvsc: ENST00000609943.1:c.2663-19delC
  variant of: http://identifiers.org/hgnc/7776
canonical: true
consequence: intron
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 899
  bin: 7.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 8.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 604
  bin: 7.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 5948
  bin: 3.75e1
  variant carriers: 54
genotype depth: GenotypeDepth
  all individuals: 10681
  bin: 2.25e1
  variant carriers: 61
genotype depth: GenotypeDepth
  all individuals: 874
  bin: 7.5e0
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 698
  bin: 9.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 5423
  bin: 4.25e1
  variant carriers: 48
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 8.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1409
  bin: 6.75e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 2863
  bin: 5.75e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 2068
  bin: 1.25e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 2152
  bin: 6.25e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 3213
  bin: 1.75e1
  variant carriers: 40
genotype depth: GenotypeDepth
  all individuals: 6968
  bin: 2.75e1
  variant carriers: 74
genotype depth: GenotypeDepth
  all individuals: 3896
  bin: 5.25e1
  variant carriers: 47
genotype depth: GenotypeDepth
  all individuals: 4624
  bin: 4.75e1
  variant carriers: 37
genotype depth: GenotypeDepth
  all individuals: 6928
  bin: 3.25e1
  variant carriers: 65
genotype quality: GenotypeQuality
  all individuals: 1245
  bin: 2.25e1
  variant carriers: 19
genotype quality: GenotypeQuality
  all individuals: 7772
  bin: 6.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 1010
  bin: 1.75e1
  variant carriers: 17
genotype quality: GenotypeQuality
  all individuals: 855
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1256
  bin: 7.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 987
  bin: 4.25e1
  variant carriers: 12
genotype quality: GenotypeQuality
  all individuals: 3413
  bin: 2.5e0
  variant carriers: 24
genotype quality: GenotypeQuality
  all individuals: 2190
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1120
  bin: 7.5e0
  variant carriers: 19
genotype quality: GenotypeQuality
  all individuals: 1034
  bin: 1.25e1
  variant carriers: 19
num of homozygotes: 6
population: African
population: Other
population: East Asian
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
reference allele: AG
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum

20-50008006-AGG-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50008006
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 50008004
    reference: chr 20
allele count: 9
allele frequency: 8.479846232121657e-5
allele num: 106134
alternate allele: A
canonical: false
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 190
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10681
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3896
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3213
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2863
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5948
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2152
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4624
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2068
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6968
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1409
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6928
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5423
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 874
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 899
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 604
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 698
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1106
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2190
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1010
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7772
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 979
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 855
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1142
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1120
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1002
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1034
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1110
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3413
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 810
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 797
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1299
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29985
  bin: 9.75e1
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 1245
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1127
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 987
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1256
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 7988
  num of homozygotes: 0
population: Other
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 800
  num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 6186
  num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 13256
  num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
reference allele: AGG
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum

20-50008007-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50008007
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 50008007
    reference: chr 20
allele count: 5
allele frequency: 1.192748091603053e-4
allele num: 41920
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl transcript: ENST00000496054
  gene symbol: NFATC2
  hgvsc: ENST00000496054.1:n.578-19C>T
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000379330
  ensembl transcript: ENST00000396009
  gene symbol: NFATC2
  hgvsc: ENST00000396009.3:c.2723-19C>T
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477370
  ensembl transcript: ENST00000609943
  gene symbol: NFATC2
  hgvsc: ENST00000609943.1:c.2663-19C>T
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000396471
  ensembl transcript: ENST00000414705
  gene symbol: NFATC2
  hgvsc: ENST00000414705.1:c.*45-19C>T
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477142
  ensembl transcript: ENST00000610033
  gene symbol: NFATC2
  hgvsc: ENST00000610033.1:c.*45-19C>T
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000360619
  ensembl transcript: ENST00000371564
  gene symbol: NFATC2
  hgvsc: ENST00000371564.3:c.*45-19C>T
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477342
  ensembl transcript: ENST00000609507
  gene symbol: NFATC2
  hgvsc: ENST00000609507.1:c.*45-19C>T
  variant of: http://identifiers.org/hgnc/7776
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3171
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3166
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3786
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1911
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2889
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2611
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3436
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3765
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3002
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3142
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1433
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3249
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6816
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3689
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3658
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 994
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 330
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1060
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2038
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 312
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 235
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1063
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30034
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 328
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3978
  bin: 9.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 903
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: African
population: East Asian
reference allele: G
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP

20-50008007-G-GA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50008007
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 50008008
    reference: chr 20
allele count: 5
allele frequency: 1.192748091603053e-4
allele num: 41920
alternate allele: GA
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000379330
  ensembl transcript: ENST00000396009
  gene symbol: NFATC2
  hgvsc: ENST00000396009.3:c.2723-20_2723-19insT
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477142
  ensembl transcript: ENST00000610033
  gene symbol: NFATC2
  hgvsc: ENST00000610033.1:c.*45-20_*45-19insT
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl transcript: ENST00000496054
  gene symbol: NFATC2
  hgvsc: ENST00000496054.1:n.578-20_578-19insT
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477342
  ensembl transcript: ENST00000609507
  gene symbol: NFATC2
  hgvsc: ENST00000609507.1:c.*45-20_*45-19insT
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000396471
  ensembl transcript: ENST00000414705
  gene symbol: NFATC2
  hgvsc: ENST00000414705.1:c.*45-20_*45-19insT
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477370
  ensembl transcript: ENST00000609943
  gene symbol: NFATC2
  hgvsc: ENST00000609943.1:c.2663-20_2663-19insT
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000360619
  ensembl transcript: ENST00000371564
  gene symbol: NFATC2
  hgvsc: ENST00000371564.3:c.*45-20_*45-19insT
  variant of: http://identifiers.org/hgnc/7776
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1433
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3166
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3142
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3765
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3436
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3002
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3786
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 994
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3689
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3171
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3249
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6816
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1911
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3658
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2611
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2889
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 309
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 312
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 248
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 328
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 665
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 470
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 590
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 252
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 597
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30034
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: Other
population: African
population: East Asian
population: South Asian
population: European (Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD

20-50008007-G-GC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50008007
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 50008008
    reference: chr 20
allele count: 6
allele frequency: 1.431297709923664e-4
allele num: 41920
alternate allele: GC
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000360619
  ensembl transcript: ENST00000371564
  gene symbol: NFATC2
  hgvsc: ENST00000371564.3:c.*45-20_*45-19insG
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477142
  ensembl transcript: ENST00000610033
  gene symbol: NFATC2
  hgvsc: ENST00000610033.1:c.*45-20_*45-19insG
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000396471
  ensembl transcript: ENST00000414705
  gene symbol: NFATC2
  hgvsc: ENST00000414705.1:c.*45-20_*45-19insG
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477370
  ensembl transcript: ENST00000609943
  gene symbol: NFATC2
  hgvsc: ENST00000609943.1:c.2663-20_2663-19insG
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl transcript: ENST00000496054
  gene symbol: NFATC2
  hgvsc: ENST00000496054.1:n.578-20_578-19insG
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000379330
  ensembl transcript: ENST00000396009
  gene symbol: NFATC2
  hgvsc: ENST00000396009.3:c.2723-20_2723-19insG
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477342
  ensembl transcript: ENST00000609507
  gene symbol: NFATC2
  hgvsc: ENST00000609507.1:c.*45-20_*45-19insG
  variant of: http://identifiers.org/hgnc/7776
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3765
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3142
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3786
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3249
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3436
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2611
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3171
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3002
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3166
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3658
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 994
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6816
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1911
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1433
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3689
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2889
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 252
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 457
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1063
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 312
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3978
  bin: 9.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 399
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30034
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1060
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 235
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 328
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Latino
population: European (Finnish)
population: African
population: Other
population: East Asian
reference allele: G
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: QD
site quality: MQ

20-50008007-G-GT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50008007
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 50008008
    reference: chr 20
allele count: 10
allele frequency: 2.385496183206107e-4
allele num: 41920
alternate allele: GT
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl transcript: ENST00000496054
  gene symbol: NFATC2
  hgvsc: ENST00000496054.1:n.578-20_578-19insA
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000360619
  ensembl transcript: ENST00000371564
  gene symbol: NFATC2
  hgvsc: ENST00000371564.3:c.*45-20_*45-19insA
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000396471
  ensembl transcript: ENST00000414705
  gene symbol: NFATC2
  hgvsc: ENST00000414705.1:c.*45-20_*45-19insA
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477342
  ensembl transcript: ENST00000609507
  gene symbol: NFATC2
  hgvsc: ENST00000609507.1:c.*45-20_*45-19insA
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477142
  ensembl transcript: ENST00000610033
  gene symbol: NFATC2
  hgvsc: ENST00000610033.1:c.*45-20_*45-19insA
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000379330
  ensembl transcript: ENST00000396009
  gene symbol: NFATC2
  hgvsc: ENST00000396009.3:c.2723-20_2723-19insA
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477370
  ensembl transcript: ENST00000609943
  gene symbol: NFATC2
  hgvsc: ENST00000609943.1:c.2663-20_2663-19insA
  variant of: http://identifiers.org/hgnc/7776
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3689
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3171
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2889
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3786
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1433
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6816
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3658
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3765
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3166
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3436
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3142
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3249
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 994
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2611
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1911
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3002
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 252
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 470
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1063
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 309
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 235
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 312
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 903
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3978
  bin: 9.75e1
  variant carriers: 10
genotype quality: GenotypeQuality
  all individuals: 7622
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 248
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: East Asian
population: European (Finnish)
population: African
population: South Asian
population: Other
reference allele: G
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: DP

20-50008008-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50008008
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 50008008
    reference: chr 20
allele count: 14
allele frequency: 1.184393083144394e-4
allele num: 118204
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000379330
  ensembl transcript: ENST00000396009
  gene symbol: NFATC2
  hgvsc: ENST00000396009.3:c.2723-20C>G
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000396471
  ensembl transcript: ENST00000414705
  gene symbol: NFATC2
  hgvsc: ENST00000414705.1:c.*45-20C>G
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477142
  ensembl transcript: ENST00000610033
  gene symbol: NFATC2
  hgvsc: ENST00000610033.1:c.*45-20C>G
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl transcript: ENST00000496054
  gene symbol: NFATC2
  hgvsc: ENST00000496054.1:n.578-20C>G
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477342
  ensembl transcript: ENST00000609507
  gene symbol: NFATC2
  hgvsc: ENST00000609507.1:c.*45-20C>G
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000360619
  ensembl transcript: ENST00000371564
  gene symbol: NFATC2
  hgvsc: ENST00000371564.3:c.*45-20C>G
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477370
  ensembl transcript: ENST00000609943
  gene symbol: NFATC2
  hgvsc: ENST00000609943.1:c.2663-20C>G
  variant of: http://identifiers.org/hgnc/7776
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2123
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 610
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6866
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7050
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5994
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4547
  bin: 5.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 3188
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1654
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 685
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4921
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 640
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5843
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1411
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5998
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 911
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6936
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 168
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2387
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4566
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10996
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2819
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 198
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 129
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 526
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 348
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3108
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Other
population: South Asian
population: East Asian
reference allele: G
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum

20-50008008-G-GA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50008008
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 50008009
    reference: chr 20
allele count: 4
allele frequency: 3.383980237555413e-5
allele num: 118204
alternate allele: GA
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000396471
  ensembl transcript: ENST00000414705
  gene symbol: NFATC2
  hgvsc: ENST00000414705.1:c.*45-21_*45-20insT
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000379330
  ensembl transcript: ENST00000396009
  gene symbol: NFATC2
  hgvsc: ENST00000396009.3:c.2723-21_2723-20insT
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477142
  ensembl transcript: ENST00000610033
  gene symbol: NFATC2
  hgvsc: ENST00000610033.1:c.*45-21_*45-20insT
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477370
  ensembl transcript: ENST00000609943
  gene symbol: NFATC2
  hgvsc: ENST00000609943.1:c.2663-21_2663-20insT
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477342
  ensembl transcript: ENST00000609507
  gene symbol: NFATC2
  hgvsc: ENST00000609507.1:c.*45-21_*45-20insT
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl transcript: ENST00000496054
  gene symbol: NFATC2
  hgvsc: ENST00000496054.1:n.578-21_578-20insT
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000360619
  ensembl transcript: ENST00000371564
  gene symbol: NFATC2
  hgvsc: ENST00000371564.3:c.*45-21_*45-20insT
  variant of: http://identifiers.org/hgnc/7776
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 610
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7050
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5843
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5998
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1654
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 685
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6866
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4921
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3188
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4547
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 911
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6936
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5994
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2123
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1411
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 640
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2819
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 454
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 168
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10996
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 571
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 440
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3274
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3108
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 844
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 741
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Other
population: South Asian
population: East Asian
reference allele: G
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum

20-50008008-G-GC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50008008
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 50008009
    reference: chr 20
allele count: 14
allele frequency: 1.184393083144394e-4
allele num: 118204
alternate allele: GC
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000396471
  ensembl transcript: ENST00000414705
  gene symbol: NFATC2
  hgvsc: ENST00000414705.1:c.*45-21_*45-20insG
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477342
  ensembl transcript: ENST00000609507
  gene symbol: NFATC2
  hgvsc: ENST00000609507.1:c.*45-21_*45-20insG
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477370
  ensembl transcript: ENST00000609943
  gene symbol: NFATC2
  hgvsc: ENST00000609943.1:c.2663-21_2663-20insG
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477142
  ensembl transcript: ENST00000610033
  gene symbol: NFATC2
  hgvsc: ENST00000610033.1:c.*45-21_*45-20insG
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000379330
  ensembl transcript: ENST00000396009
  gene symbol: NFATC2
  hgvsc: ENST00000396009.3:c.2723-21_2723-20insG
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000360619
  ensembl transcript: ENST00000371564
  gene symbol: NFATC2
  hgvsc: ENST00000371564.3:c.*45-21_*45-20insG
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl transcript: ENST00000496054
  gene symbol: NFATC2
  hgvsc: ENST00000496054.1:n.578-21_578-20insG
  variant of: http://identifiers.org/hgnc/7776
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4547
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5843
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6936
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 610
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1411
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3188
  bin: 6.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 6866
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 685
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4921
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 640
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5998
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2123
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1654
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 911
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7050
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5994
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2387
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 454
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3274
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 741
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 844
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 493
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 440
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 571
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 168
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2819
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Other
population: African
population: South Asian
population: European (Non-Finnish)
population: Latino
reference allele: G
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum

20-50008008-G-GT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50008008
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 50008009
    reference: chr 20
allele count: 75
allele frequency: 6.344962945416399e-4
allele num: 118204
alternate allele: GT
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl transcript: ENST00000496054
  gene symbol: NFATC2
  hgvsc: ENST00000496054.1:n.578-21_578-20insA
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477142
  ensembl transcript: ENST00000610033
  gene symbol: NFATC2
  hgvsc: ENST00000610033.1:c.*45-21_*45-20insA
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000379330
  ensembl transcript: ENST00000396009
  gene symbol: NFATC2
  hgvsc: ENST00000396009.3:c.2723-21_2723-20insA
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000396471
  ensembl transcript: ENST00000414705
  gene symbol: NFATC2
  hgvsc: ENST00000414705.1:c.*45-21_*45-20insA
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477342
  ensembl transcript: ENST00000609507
  gene symbol: NFATC2
  hgvsc: ENST00000609507.1:c.*45-21_*45-20insA
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477370
  ensembl transcript: ENST00000609943
  gene symbol: NFATC2
  hgvsc: ENST00000609943.1:c.2663-21_2663-20insA
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000360619
  ensembl transcript: ENST00000371564
  gene symbol: NFATC2
  hgvsc: ENST00000371564.3:c.*45-21_*45-20insA
  variant of: http://identifiers.org/hgnc/7776
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 911
  bin: 7.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 685
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3188
  bin: 6.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5998
  bin: 3.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 6866
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 6936
  bin: 4.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 4547
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5843
  bin: 5.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1411
  bin: 7.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 610
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4921
  bin: 2.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 2123
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5994
  bin: 3.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 640
  bin: 8.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 7050
  bin: 2.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 1654
  bin: 9.75e1
  variant carriers: 10
genotype quality: GenotypeQuality
  all individuals: 129
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 741
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 385
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 454
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3274
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 526
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 440
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 198
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 844
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4566
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: Other
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum

20-50008008-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50008008
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 50008008
    reference: chr 20
allele count: 3
allele frequency: 2.53798517816656e-5
allele num: 118204
alternate allele: T
canonical: false
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7050
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 640
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5843
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6866
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 610
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3188
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4547
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5994
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5998
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 911
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2123
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 685
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4921
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6936
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1411
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1654
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 571
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4566
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 168
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3576
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 129
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3274
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 24508
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 493
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 198
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 844
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 385
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2387
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 440
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 741
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3108
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2819
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10996
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 454
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 526
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 348
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 1
  allele frequency: 1.51851064475962e-5
  allele num: 65854
  num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 6576
  num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 15910
  num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 11438
  num of homozygotes: 0
population: African
population: East Asian
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: QD

20-50008009-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50008009
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 50008009
    reference: chr 20
allele count: 18
allele frequency: 1.498726082829595e-4
allele num: 120102
alternate allele: C
canonical: false
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 7134
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6043
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5994
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3146
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 689
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 657
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1362
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1636
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6839
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2063
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4498
  bin: 5.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 6826
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5818
  bin: 5.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 5283
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 875
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25100
  bin: 9.75e1
  variant carriers: 18
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3426
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11625
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2983
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 395
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 444
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 135
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 201
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 388
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 775
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 263
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3743
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3213
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2454
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 258
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4863
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 1
  allele frequency: 1.168497312456181e-4
  allele num: 8558
  num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 6588
  num of homozygotes: 0
population: Other
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 898
  num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 1
  allele frequency: 6.109481915933529e-5
  allele num: 16368
  num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
reference allele: G
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD

20-50008009-G-GA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50008009
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 50008010
    reference: chr 20
allele count: 1
allele frequency: 8.326256015719971e-6
allele num: 120102
alternate allele: GA
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000379330
  ensembl transcript: ENST00000396009
  gene symbol: NFATC2
  hgvsc: ENST00000396009.3:c.2723-22_2723-21insT
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl transcript: ENST00000496054
  gene symbol: NFATC2
  hgvsc: ENST00000496054.1:n.578-22_578-21insT
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477342
  ensembl transcript: ENST00000609507
  gene symbol: NFATC2
  hgvsc: ENST00000609507.1:c.*45-22_*45-21insT
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477370
  ensembl transcript: ENST00000609943
  gene symbol: NFATC2
  hgvsc: ENST00000609943.1:c.2663-22_2663-21insT
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000360619
  ensembl transcript: ENST00000371564
  gene symbol: NFATC2
  hgvsc: ENST00000371564.3:c.*45-22_*45-21insT
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000396471
  ensembl transcript: ENST00000414705
  gene symbol: NFATC2
  hgvsc: ENST00000414705.1:c.*45-22_*45-21insT
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477142
  ensembl transcript: ENST00000610033
  gene symbol: NFATC2
  hgvsc: ENST00000610033.1:c.*45-22_*45-21insT
  variant of: http://identifiers.org/hgnc/7776
canonical: true
consequence: intron
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 4498
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7134
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6043
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5994
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1636
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5283
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3146
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6826
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 875
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1362
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 689
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2063
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 657
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6839
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5818
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 388
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25100
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 258
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2983
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 775
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 201
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 135
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: ReadPosRankSum

20-50008009-G-GC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50008009
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 50008010
    reference: chr 20
allele count: 11
allele frequency: 9.158881617291969e-5
allele num: 120102
alternate allele: GC
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477142
  ensembl transcript: ENST00000610033
  gene symbol: NFATC2
  hgvsc: ENST00000610033.1:c.*45-22_*45-21insG
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000379330
  ensembl transcript: ENST00000396009
  gene symbol: NFATC2
  hgvsc: ENST00000396009.3:c.2723-22_2723-21insG
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477370
  ensembl transcript: ENST00000609943
  gene symbol: NFATC2
  hgvsc: ENST00000609943.1:c.2663-22_2663-21insG
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477342
  ensembl transcript: ENST00000609507
  gene symbol: NFATC2
  hgvsc: ENST00000609507.1:c.*45-22_*45-21insG
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl transcript: ENST00000496054
  gene symbol: NFATC2
  hgvsc: ENST00000496054.1:n.578-22_578-21insG
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000360619
  ensembl transcript: ENST00000371564
  gene symbol: NFATC2
  hgvsc: ENST00000371564.3:c.*45-22_*45-21insG
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000396471
  ensembl transcript: ENST00000414705
  gene symbol: NFATC2
  hgvsc: ENST00000414705.1:c.*45-22_*45-21insG
  variant of: http://identifiers.org/hgnc/7776
canonical: true
consequence: intron
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 1362
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6839
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 689
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 657
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1636
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2063
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5283
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5818
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 875
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4498
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6826
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5994
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7134
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6043
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3146
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 444
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 395
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 263
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 775
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11625
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2454
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 135
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: Other
population: South Asian
population: African
population: European (Finnish)
population: East Asian
reference allele: G
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum

20-50008009-G-GT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50008009
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 50008010
    reference: chr 20
allele count: 75
allele frequency: 6.244692011789978e-4
allele num: 120102
alternate allele: GT
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477342
  ensembl transcript: ENST00000609507
  gene symbol: NFATC2
  hgvsc: ENST00000609507.1:c.*45-22_*45-21insA
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000360619
  ensembl transcript: ENST00000371564
  gene symbol: NFATC2
  hgvsc: ENST00000371564.3:c.*45-22_*45-21insA
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl transcript: ENST00000496054
  gene symbol: NFATC2
  hgvsc: ENST00000496054.1:n.578-22_578-21insA
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000396471
  ensembl transcript: ENST00000414705
  gene symbol: NFATC2
  hgvsc: ENST00000414705.1:c.*45-22_*45-21insA
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477142
  ensembl transcript: ENST00000610033
  gene symbol: NFATC2
  hgvsc: ENST00000610033.1:c.*45-22_*45-21insA
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477370
  ensembl transcript: ENST00000609943
  gene symbol: NFATC2
  hgvsc: ENST00000609943.1:c.2663-22_2663-21insA
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000379330
  ensembl transcript: ENST00000396009
  gene symbol: NFATC2
  hgvsc: ENST00000396009.3:c.2723-22_2723-21insA
  variant of: http://identifiers.org/hgnc/7776
canonical: true
consequence: intron
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 5818
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 689
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5994
  bin: 3.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 1636
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 8.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 657
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 875
  bin: 7.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 6043
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 7134
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 4498
  bin: 5.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 6839
  bin: 4.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1362
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 9.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 5283
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 6826
  bin: 4.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 2063
  bin: 6.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 8.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3146
  bin: 6.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 263
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3426
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3743
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11625
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 388
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 444
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 201
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 258
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: Other
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: DP

20-50008009-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50008009
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 50008009
    reference: chr 20
allele count: 75
allele frequency: 6.244692011789978e-4
allele num: 120102
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000379330
  ensembl transcript: ENST00000396009
  gene symbol: NFATC2
  hgvsc: ENST00000396009.3:c.2723-21C>A
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000396471
  ensembl transcript: ENST00000414705
  gene symbol: NFATC2
  hgvsc: ENST00000414705.1:c.*45-21C>A
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000360619
  ensembl transcript: ENST00000371564
  gene symbol: NFATC2
  hgvsc: ENST00000371564.3:c.*45-21C>A
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477370
  ensembl transcript: ENST00000609943
  gene symbol: NFATC2
  hgvsc: ENST00000609943.1:c.2663-21C>A
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477142
  ensembl transcript: ENST00000610033
  gene symbol: NFATC2
  hgvsc: ENST00000610033.1:c.*45-21C>A
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl protein: ENSP00000477342
  ensembl transcript: ENST00000609507
  gene symbol: NFATC2
  hgvsc: ENST00000609507.1:c.*45-21C>A
  variant of: http://identifiers.org/hgnc/7776
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000101096
  ensembl transcript: ENST00000496054
  gene symbol: NFATC2
  hgvsc: ENST00000496054.1:n.578-21C>A
  variant of: http://identifiers.org/hgnc/7776
canonical: true
consequence: intron
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7134
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3146
  bin: 6.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 1636
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5994
  bin: 3.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 5818
  bin: 5.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 6826
  bin: 4.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 5283
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6839
  bin: 4.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 875
  bin: 7.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 1362
  bin: 7.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 6043
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 689
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 657
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 9.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 4498
  bin: 5.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 2063
  bin: 6.75e1
  variant carriers: 12
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 388
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3743
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 258
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 263
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 775
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 201
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4863
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Other
population: Latino
reference allele: G
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: MQ

20-50008009-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50008009
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 50008009
    reference: chr 20
allele count: 9
allele frequency: 7.493630414147974e-5
allele num: 120102
alternate allele: A
canonical: false
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4498
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 689
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 657
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6826
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5283
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7134
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6043
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2063
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1362
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5994
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1636
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5818
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 875
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6839
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3146
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 395
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 201
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3426
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 263
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11625
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4863
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 775
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25100
  bin: 9.75e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 444
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 135
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2983
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 258
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3743
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3213
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2454
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 388
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 6588
  num of homozygotes: 0
population: Other
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 898
  num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 9952
  num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 11518
  num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: BaseQRankSum

20-50008010-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 50008010
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 50008010
    reference: chr 20
allele count: 6
allele frequency: 4.988858216649483e-5
allele num: 120268
alternate allele: A
canonical: false
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 664
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 683
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6835
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1641
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3145
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5808
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6863
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5991
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2060
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
reference allele: G

GenotypeQuality
all individuals: 428
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17598
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 202
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 793
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 957
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 162
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 725
bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 9.51052498097895e-5
allele num: 31544
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6054
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 5.042864346949068e-4
allele num: 3966
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3230
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4070
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12064
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 512
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.898e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.448e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.79e0

MQRankSum
type: SiteQuality
SIO_000300: 3.72e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.9e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.35e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.11e0

DP
type: SiteQuality
SIO_000300: 9.14485e5

GenotypeQuality
all individuals: 1151
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 201
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 228
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1066
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 591
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3531
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 438
bin: 5.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.415342253997391e-5
allele num: 41402
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6132
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7252
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 626
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13510
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4272
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5444
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 9.630000000000001e0

BaseQRankSum
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 5.5e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.5e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -1.17e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.17e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.059892e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.87e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 17891
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1092
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1623
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26373
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 817
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1135
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 235
bin: 8.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 644
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7580
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6808
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13852
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4476
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.731301939058172e-4
allele num: 5776
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.260704435502102e-5
allele num: 44234
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

DP
type: SiteQuality
SIO_000300: 1.103607e6

BaseQRankSum
type: SiteQuality
SIO_000300: -3.34e0

VQSLOD
type: SiteQuality
SIO_000300: 1.54e-1

MQRankSum
type: SiteQuality
SIO_000300: 8.33e-1

MQ
type: SiteQuality
SIO_000300: 5.911e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.01e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.06e-1

QD
type: SiteQuality
SIO_000300: 1.302e1

GenotypeQuality
all individuals: 3915
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1149
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 661
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 242
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27801
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 779
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1125
bin: 3.75e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 1.271940981938438e-4
allele num: 7862
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 46300
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6040
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14080
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 668
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4620
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7278
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.78e-1

DP
type: SiteQuality
SIO_000300: 1.136362e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -2.52e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -1.601e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.78e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 2.187e1

MQRankSum
type: SiteQuality
SIO_000300: 2.78e-1

GenotypeQuality
all individuals: 713
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 254
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1474
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 575
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 905
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1273
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 879
bin: 9.75e1
variant carriers: 96

Latino
type: Population
allele count: 22
allele frequency: 2.730206006453214e-3
allele num: 8058
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 9
allele frequency: 1.827336960935597e-4
allele num: 49252
num of homozygotes: 0

East Asian
type: Population
allele count: 8
allele frequency: 1.250390747108471e-3
allele num: 6398
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.38121546961326e-4
allele num: 14480
num of homozygotes: 0

African
type: Population
allele count: 55
allele frequency: 6.668283220174587e-3
allele num: 8248
num of homozygotes: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4856
num of homozygotes: 0

Other
type: Population
allele count: 2
allele frequency: 2.816901408450704e-3
allele num: 710
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.35e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.4e-3

MQRankSum
type: SiteQuality
SIO_000300: 2.51e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.884e1

DP
type: SiteQuality
SIO_000300: 1.193122e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.84e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.5e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.11e0

QD
type: SiteQuality
SIO_000300: 1.527e1

GenotypeQuality
all individuals: 298
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 640
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1226
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 505
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1403
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 955
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11951
bin: 2.25e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 1.178689297501179e-4
allele num: 8484
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 2.022381016583524e-4
allele num: 14834
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8720
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6762
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 52088
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5064
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 730
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 6.854e0

MQRankSum
type: SiteQuality
SIO_000300: 3.8e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.296e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.07e-1

MQ
type: SiteQuality
SIO_000300: 5.885e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 2.74e0

QD
type: SiteQuality
SIO_000300: 1.172e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.6e-2

DP
type: SiteQuality
SIO_000300: 1.237489e6

GenotypeQuality
all individuals: 902
bin: 8.25e1
variant carriers: 6

GenotypeQuality
all individuals: 1824
bin: 9.75e1
variant carriers: 1082

GenotypeQuality
all individuals: 880
bin: 2.75e1
variant carriers: 1

GenotypeQuality
all individuals: 405
bin: 4.25e1
variant carriers: 2

GenotypeQuality
all individuals: 331
bin: 8.75e1
variant carriers: 3

GenotypeQuality
all individuals: 1579
bin: 7.25e1
variant carriers: 4

GenotypeQuality
all individuals: 217
bin: 5.75e1
variant carriers: 4

Other
type: Population
allele count: 5
allele frequency: 6.41025641025641e-3
allele num: 780
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 50
allele frequency: 8.992482284809899e-4
allele num: 55602
num of homozygotes: 0

Latino
type: Population
allele count: 95
allele frequency: 9.958071278825996e-3
allele num: 9540
num of homozygotes: 1

African
type: Population
allele count: 1025
allele frequency: 1.112679114198871e-1
allele num: 9212
num of homozygotes: 50

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5348
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7186
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.970313936687246e-4
allele num: 15226
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.09e0

QD
type: SiteQuality
SIO_000300: 1.521e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.51e-1

MQ
type: SiteQuality
SIO_000300: 5.86e1

VQSLOD
type: SiteQuality
SIO_000300: 2.13e0

MQRankSum
type: SiteQuality
SIO_000300: 1.84e-1

DP
type: SiteQuality
SIO_000300: 1.323493e6

ClippingRankSum
type: SiteQuality
SIO_000300: -3.65e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.36e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
all individuals: 1770
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 370
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 376
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 378
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36690
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 489
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 825
bin: 9.75e1
variant carriers: 2

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 806
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5518
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10056
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7452
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9490
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.449227373068433e-5
allele num: 57984
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15502
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.3e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -1.569e0

MQRankSum
type: SiteQuality
SIO_000300: 7.69e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.32e0

QD
type: SiteQuality
SIO_000300: 1.57e1

DP
type: SiteQuality
SIO_000300: 1.351447e6

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 1.9e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.22e-1

GenotypeQuality
all individuals: 1885
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6422
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6215
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1829
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 781
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 532
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 371
bin: 4.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15602
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 9.79431929480901e-5
allele num: 10210
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7582
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9592
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5592
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 818
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 58906
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.367985e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.0e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -9.2e-2

QD
type: SiteQuality
SIO_000300: 1.855e1

VQSLOD
type: SiteQuality
SIO_000300: 5.77e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.71e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.76e-1

MQ
type: SiteQuality
SIO_000300: 5.956e1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.51e0

GenotypeQuality
all individuals: 37255
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 403
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 384
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1882
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6109
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6254
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 484
bin: 5.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5624
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.278608873545583e-4
allele num: 15642
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 59232
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 814
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7618
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10256
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9648
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.202e0

DP
type: SiteQuality
SIO_000300: 1.376202e6

MQRankSum
type: SiteQuality
SIO_000300: -4.75e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -8.72e-1

QD
type: SiteQuality
SIO_000300: 6.86e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.24e-1

FS
type: SiteQuality
SIO_000300: 6.98e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.1e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -9.4e-2

MQ
type: SiteQuality
SIO_000300: 5.645e1

GenotypeQuality
all individuals: 528
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 107
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1080
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1809
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 650
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37255
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 835
bin: 9.75e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5624
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10256
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.393044367727913e-5
allele num: 15642
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7618
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9648
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 59232
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 814
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 6.86e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.24e-1

MQRankSum
type: SiteQuality
SIO_000300: -4.75e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.1e-3

DP
type: SiteQuality
SIO_000300: 1.376202e6

FS
type: SiteQuality
SIO_000300: 6.98e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.4e-2

MQ
type: SiteQuality
SIO_000300: 5.645e1

BaseQRankSum
type: SiteQuality
SIO_000300: -8.72e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.202e0

GenotypeQuality
all individuals: 741
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5834
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 462
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 591
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6338
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 380
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 383
bin: 4.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 59610
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 820
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 9.665571235260003e-5
allele num: 10346
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7668
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15680
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9674
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5662
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.998e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.33e0

MQ
type: SiteQuality
SIO_000300: 5.907e1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.0e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.4e-3

MQRankSum
type: SiteQuality
SIO_000300: -9.1e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.93e-1

VQSLOD
type: SiteQuality
SIO_000300: -4.462e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.382775e6

GenotypeQuality
all individuals: 199
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 558
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 445
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 392
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 596
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 426
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 188
bin: 7.5e0
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 9.57670944263551e-5
allele num: 10442
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 834
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 18
allele frequency: 2.987155232500249e-4
allele num: 60258
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7734
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.053388090349076e-4
allele num: 9740
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5728
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15768
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.85e-1

MQ
type: SiteQuality
SIO_000300: 5.878e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.5e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -2.39e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.41e-1

QD
type: SiteQuality
SIO_000300: 1.42e1

DP
type: SiteQuality
SIO_000300: 1.401826e6

VQSLOD
type: SiteQuality
SIO_000300: 2.28e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.639999999999999e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
all individuals: 526
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38554
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2036
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 352
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4532
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2062
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 479
bin: 5.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7814
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.524646853489055e-5
allele num: 61306
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10670
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15896
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5816
num of homozygotes: 0

African
type: Population
allele count: 7
allele frequency: 7.110930516050386e-4
allele num: 9844
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 846
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.602e0

MQRankSum
type: SiteQuality
SIO_000300: 7.32e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.14e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-3

MQ
type: SiteQuality
SIO_000300: 5.904e1

QD
type: SiteQuality
SIO_000300: 1.484e1

VQSLOD
type: SiteQuality
SIO_000300: 2.69e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.59e0

DP
type: SiteQuality
SIO_000300: 1.420584e6

ClippingRankSum
type: SiteQuality
SIO_000300: -3.42e-1

GenotypeQuality
all individuals: 7354
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 305
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 569
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 222
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1446
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 280
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2278
bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6184
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11130
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8066
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.559429872438636e-5
allele num: 64126
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16232
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10092
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.06e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.4e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.4e-3

QD
type: SiteQuality
SIO_000300: 1.5e1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.570000000000001e-1

MQ
type: SiteQuality
SIO_000300: 5.896e1

FS
type: SiteQuality
SIO_000300: 4.086e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.74e-1

DP
type: SiteQuality
SIO_000300: 1.475809e6

VQSLOD
type: SiteQuality
SIO_000300: -4.991e-1

GenotypeQuality
all individuals: 27
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 606
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 554
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 952
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2502
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1166
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7691
bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65492
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8250
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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African
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allele frequency: 9.737098344693281e-5
allele num: 10270
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6406
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Other
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allele frequency: 0.0e0
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num of homozygotes: 0

QD
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MQRankSum
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ReadPosRankSum
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MQ
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SIO_000300: 5.755e1

FS
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BaseQRankSum
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InbreedingCoeff
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ClippingRankSum
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VQSLOD
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele frequency: 0.0e0
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Latino
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Other
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allele frequency: 0.0e0
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African
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allele frequency: 2.334630350194552e-3
allele num: 10280
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6416
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European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 65616
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

FS
type: SiteQuality
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QD
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MQRankSum
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ClippingRankSum
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InbreedingCoeff
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VQSLOD
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DP
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MQ
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BaseQRankSum
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele frequency: 0.0e0
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European (Finnish)
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South Asian
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 1.503578516870151e-5
allele num: 66508
num of homozygotes: 0

East Asian
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MQ
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ReadPosRankSum
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VQSLOD
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DP
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FS
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InbreedingCoeff
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MQRankSum
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QD
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BaseQRankSum
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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African
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East Asian
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Other
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Latino
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 1.500105007350515e-5
allele num: 66662
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BaseQRankSum
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FS
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MQ
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ClippingRankSum
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DP
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MQRankSum
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VQSLOD
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QD
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InbreedingCoeff
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele frequency: 1.156604210039325e-4
allele num: 8646
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South Asian
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allele frequency: 0.0e0
allele num: 16508
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Latino
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European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 66720
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European (Finnish)
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allele frequency: 0.0e0
allele num: 6614
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African
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allele num: 10402
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Other
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VQSLOD
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MQ
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MQRankSum
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ClippingRankSum
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QD
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InbreedingCoeff
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FS
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BaseQRankSum
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DP
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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allele num: 908
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Latino
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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South Asian
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East Asian
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allele num: 8654
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African
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European (Non-Finnish)
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FS
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QD
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MQ
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InbreedingCoeff
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ReadPosRankSum
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MQRankSum
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BaseQRankSum
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VQSLOD
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DP
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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European (Finnish)
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South Asian
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East Asian
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European (Non-Finnish)
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allele num: 66732
num of homozygotes: 0

Latino
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African
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MQ
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FS
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ReadPosRankSum
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ClippingRankSum
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BaseQRankSum
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InbreedingCoeff
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DP
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MQRankSum
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QD
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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European (Non-Finnish)
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European (Finnish)
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East Asian
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Latino
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African
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Other
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FS
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QD
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ClippingRankSum
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InbreedingCoeff
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VQSLOD
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DP
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MQRankSum
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MQ
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BaseQRankSum
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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African
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European (Finnish)
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European (Non-Finnish)
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East Asian
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South Asian
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MQRankSum
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InbreedingCoeff
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DP
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ReadPosRankSum
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MQ
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QD
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VQSLOD
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FS
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BaseQRankSum
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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European (Non-Finnish)
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African
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South Asian
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East Asian
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European (Finnish)
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MQ
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MQRankSum
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InbreedingCoeff
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VQSLOD
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FS
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DP
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ReadPosRankSum
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BaseQRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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South Asian
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African
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Latino
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European (Finnish)
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East Asian
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FS
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ClippingRankSum
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BaseQRankSum
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VQSLOD
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ReadPosRankSum
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InbreedingCoeff
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MQRankSum
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QD
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MQ
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42586
bin: 6.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498576352465158e-5
allele num: 66730
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.637070305752289e-5
allele num: 11578
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.868e0

BaseQRankSum
type: SiteQuality
SIO_000300: 7.68e-1

MQ
type: SiteQuality
SIO_000300: 5.928e1

FS
type: SiteQuality
SIO_000300: 2.627e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.26e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 1.95e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.25e-1

DP
type: SiteQuality
SIO_000300: 1.565479e6

QD
type: SiteQuality
SIO_000300: 7.07e0

GenotypeQuality
all individuals: 2
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2791
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variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.996973057212216e-5
allele num: 66734
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.39e0

DP
type: SiteQuality
SIO_000300: 1.5656e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.7e-1

FS
type: SiteQuality
SIO_000300: 1.155e0

MQ
type: SiteQuality
SIO_000300: 5.912e1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.8e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.25e-1

QD
type: SiteQuality
SIO_000300: 1.342e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -1.417e0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1742
bin: 8.25e1
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GenotypeQuality
all individuals: 741
bin: 8.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498531439189594e-5
allele num: 66732
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.383e0

DP
type: SiteQuality
SIO_000300: 1.565581e6

MQRankSum
type: SiteQuality
SIO_000300: -2.19e-1

QD
type: SiteQuality
SIO_000300: 1.461e1

MQ
type: SiteQuality
SIO_000300: 5.793e1

VQSLOD
type: SiteQuality
SIO_000300: -2.598e0

FS
type: SiteQuality
SIO_000300: 3.576e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.79e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 1.82e0

GenotypeQuality
all individuals: 3
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42582
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 6

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 741
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66734
num of homozygotes: 0

African
type: Population
allele count: 4
allele frequency: 3.844675124951942e-4
allele num: 10404
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.727414061150458e-4
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.823e1

FS
type: SiteQuality
SIO_000300: 4.359e0

QD
type: SiteQuality
SIO_000300: 1.171e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.015e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.577e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

DP
type: SiteQuality
SIO_000300: 1.566172e6

MQRankSum
type: SiteQuality
SIO_000300: -3.7e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 2.77e0

VQSLOD
type: SiteQuality
SIO_000300: 1.46e0

GenotypeQuality
all individuals: 1
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8362
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 740
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 17
allele frequency: 1.468301951977889e-3
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 5.993946114424431e-5
allele num: 66734
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.2e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.6e-2

MQ
type: SiteQuality
SIO_000300: 5.875e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -5.23e-1

DP
type: SiteQuality
SIO_000300: 1.567826e6

FS
type: SiteQuality
SIO_000300: 1.119e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.67e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.86e-1

QD
type: SiteQuality
SIO_000300: 1.025e1

GenotypeQuality
all individuals: 2786
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42585
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 8367
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variant carriers: 0

GenotypeQuality
all individuals: 1744
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
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variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 5.25e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.611687812379854e-5
allele num: 10404
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66736
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.5e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.41e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.324e0

QD
type: SiteQuality
SIO_000300: 1.12e1

MQ
type: SiteQuality
SIO_000300: 5.851e1

VQSLOD
type: SiteQuality
SIO_000300: -1.016e0

MQRankSum
type: SiteQuality
SIO_000300: -5.96e-1

FS
type: SiteQuality
SIO_000300: 1.765e0

DP
type: SiteQuality
SIO_000300: 1.566525e6

GenotypeQuality
all individuals: 4
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2786
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
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variant carriers: 0

GenotypeQuality
all individuals: 1052
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 42574
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 2.25e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66732
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.566229e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.131e0

MQ
type: SiteQuality
SIO_000300: 5.925e1

QD
type: SiteQuality
SIO_000300: 1.196e1

VQSLOD
type: SiteQuality
SIO_000300: 4.94e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 5.81e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.120000000000001e-1

FS
type: SiteQuality
SIO_000300: 3.587e0

MQRankSum
type: SiteQuality
SIO_000300: -4.71e-1

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 42569
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variant carriers: 0

GenotypeQuality
all individuals: 1
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.493106342165208e-5
allele num: 66728
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 2.9e-2

FS
type: SiteQuality
SIO_000300: 1.116e0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.419999999999999e-1

QD
type: SiteQuality
SIO_000300: 1.01e1

VQSLOD
type: SiteQuality
SIO_000300: -2.681e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.606e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.58e0

DP
type: SiteQuality
SIO_000300: 1.566616e6

MQ
type: SiteQuality
SIO_000300: 5.896e1

GenotypeQuality
all individuals: 8362
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
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variant carriers: 0

GenotypeQuality
all individuals: 9
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 42498
bin: 6.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498980693128672e-5
allele num: 66712
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -2.603e0

DP
type: SiteQuality
SIO_000300: 1.567088e6

FS
type: SiteQuality
SIO_000300: 1.5496e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.298e0

MQRankSum
type: SiteQuality
SIO_000300: 3.02e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.67e0

QD
type: SiteQuality
SIO_000300: 2.538e1

MQ
type: SiteQuality
SIO_000300: 5.792e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.71e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 6
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 5.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499745043342632e-5
allele num: 66678
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 6.860000000000001e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.167e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.07e0

VQSLOD
type: SiteQuality
SIO_000300: 2.0e-2

DP
type: SiteQuality
SIO_000300: 1.567748e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

QD
type: SiteQuality
SIO_000300: 1.318e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.18e-1

MQ
type: SiteQuality
SIO_000300: 5.896e1

GenotypeQuality
all individuals: 3
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variant carriers: 0

GenotypeQuality
all individuals: 6
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variant carriers: 0

GenotypeQuality
all individuals: 18
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GenotypeQuality
all individuals: 8291
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variant carriers: 0

GenotypeQuality
all individuals: 82
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 13
bin: 4.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 41871
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variant carriers: 0

GenotypeQuality
all individuals: 741
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66664
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.157139551029854e-4
allele num: 8642
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6570
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.775e1

VQSLOD
type: SiteQuality
SIO_000300: -1.452e0

DP
type: SiteQuality
SIO_000300: 1.568733e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.36e-1

FS
type: SiteQuality
SIO_000300: 8.999000000000001e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.2e-3

MQRankSum
type: SiteQuality
SIO_000300: 8.03e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.71e-1

QD
type: SiteQuality
SIO_000300: 2.803e1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.4e-1

GenotypeQuality
all individuals: 348
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 100
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8066
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1396
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 39786
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2743
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 363
bin: 2.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10306
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.501997656883655e-5
allele num: 66578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16490
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.518e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.23e0

QD
type: SiteQuality
SIO_000300: 1.013e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.11e0

FS
type: SiteQuality
SIO_000300: 2.122e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.1e-3

DP
type: SiteQuality
SIO_000300: 1.585848e6

MQRankSum
type: SiteQuality
SIO_000300: -1.31e-1

MQ
type: SiteQuality
SIO_000300: 6.086e1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.98e-1

GenotypeQuality
all individuals: 588
bin: 3.25e1
variant carriers: 1

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 408
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2545
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2553
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7527
bin: 6.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8562
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5672
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.739730816290858e-5
allele num: 11442
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 854
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10112
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15682
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65562
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -9.736000000000001e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.2e0

DP
type: SiteQuality
SIO_000300: 1.65366e6

MQRankSum
type: SiteQuality
SIO_000300: 6.44e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.889e0

MQ
type: SiteQuality
SIO_000300: 5.857e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.6e-3

FS
type: SiteQuality
SIO_000300: 4.0018e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.11e0

QD
type: SiteQuality
SIO_000300: 2.6e-1

GenotypeQuality
all individuals: 1044
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 623
bin: 1.75e1
variant carriers: 2

GenotypeQuality
all individuals: 505
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 925
bin: 9.75e1
variant carriers: 6

GenotypeQuality
all individuals: 5439
bin: 2.5e0
variant carriers: 2

GenotypeQuality
all individuals: 819
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 546
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variant carriers: 1

GenotypeQuality
all individuals: 2013
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 849
bin: 3.75e1
variant carriers: 1

GenotypeQuality
all individuals: 6166
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31492
bin: 6.25e1
variant carriers: 0

Other
type: Population
allele count: 1
allele frequency: 1.319261213720317e-3
allele num: 758
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 9.567546880979717e-5
allele num: 10452
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.964636542239686e-4
allele num: 5090
num of homozygotes: 0

South Asian
type: Population
allele count: 6
allele frequency: 4.855940433797345e-4
allele num: 12356
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.078748651564186e-4
allele num: 9270
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8136
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 8.239675686364985e-5
allele num: 60682
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.91e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.87e-2

MQRankSum
type: SiteQuality
SIO_000300: -9.6e-2

MQ
type: SiteQuality
SIO_000300: 5.888e1

DP
type: SiteQuality
SIO_000300: 1.949283e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.21e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.81e-1

FS
type: SiteQuality
SIO_000300: 2.3403e1

QD
type: SiteQuality
SIO_000300: 1.94e0

VQSLOD
type: SiteQuality
SIO_000300: -1.256e0

GenotypeQuality
all individuals: 5439
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 31492
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 849
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2244
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1097
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variant carriers: 0

GenotypeQuality
all individuals: 819
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1307
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2013
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 623
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2040
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6166
bin: 6.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 758
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.647935137272997e-5
allele num: 60682
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12356
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5090
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10452
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8136
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9270
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.888e1

DP
type: SiteQuality
SIO_000300: 1.949283e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.21e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.81e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.91e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.256e0

MQRankSum
type: SiteQuality
SIO_000300: -9.6e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.87e-2

FS
type: SiteQuality
SIO_000300: 2.3403e1

QD
type: SiteQuality
SIO_000300: 1.94e0

GenotypeQuality
all individuals: 5439
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 849
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 680
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2244
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 546
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1307
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1097
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6166
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 925
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 505
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 1.078748651564186e-4
allele num: 9270
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 8.093234056328909e-5
allele num: 12356
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8136
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 758
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 60682
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5090
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10452
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.256e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.91e-1

DP
type: SiteQuality
SIO_000300: 1.949283e6

FS
type: SiteQuality
SIO_000300: 2.3403e1

QD
type: SiteQuality
SIO_000300: 1.94e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.21e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.87e-2

MQRankSum
type: SiteQuality
SIO_000300: -9.6e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.81e-1

MQ
type: SiteQuality
SIO_000300: 5.888e1

GenotypeQuality
all individuals: 917
bin: 4.25e1
variant carriers: 11

GenotypeQuality
all individuals: 880
bin: 4.75e1
variant carriers: 5

GenotypeQuality
all individuals: 1283
bin: 3.75e1
variant carriers: 11

GenotypeQuality
all individuals: 918
bin: 5.25e1
variant carriers: 2

GenotypeQuality
all individuals: 3670
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 15196
bin: 2.5e0
variant carriers: 17

GenotypeQuality
all individuals: 418
bin: 8.75e1
variant carriers: 4

GenotypeQuality
all individuals: 1296
bin: 7.25e1
variant carriers: 10

GenotypeQuality
all individuals: 403
bin: 9.25e1
variant carriers: 3

GenotypeQuality
all individuals: 1914
bin: 3.25e1
variant carriers: 11

African
type: Population
allele count: 4
allele frequency: 5.780346820809249e-4
allele num: 6920
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 4
allele frequency: 8.837825894829872e-4
allele num: 4526
num of homozygotes: 0

South Asian
type: Population
allele count: 37
allele frequency: 5.136035535813437e-3
allele num: 7204
num of homozygotes: 0

Latino
type: Population
allele count: 9
allele frequency: 1.164596273291925e-3
allele num: 7728
num of homozygotes: 0

East Asian
type: Population
allele count: 4
allele frequency: 6.080875646093037e-4
allele num: 6578
num of homozygotes: 0

Other
type: Population
allele count: 2
allele frequency: 3.424657534246575e-3
allele num: 584
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 42
allele frequency: 8.449684142759425e-4
allele num: 49706
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.948e0

MQRankSum
type: SiteQuality
SIO_000300: -4.03e-1

FS
type: SiteQuality
SIO_000300: 4.7783e1

MQ
type: SiteQuality
SIO_000300: 5.867e1

QD
type: SiteQuality
SIO_000300: 3.7e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.07e-2

VQSLOD
type: SiteQuality
SIO_000300: -1.079e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.31e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.09e0

DP
type: SiteQuality
SIO_000300: 2.550306e6

GenotypeQuality
all individuals: 85
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2241
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6190
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 1002
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 191
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2962
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variant carriers: 0

GenotypeQuality
all individuals: 1529
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2330
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6372
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 5.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.048594597890372e-5
allele num: 65604
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9312
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8546
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.748557440111908e-4
allele num: 11438
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16134
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6546
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.947e1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.5e-1

QD
type: SiteQuality
SIO_000300: 1.467e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.48e-1

DP
type: SiteQuality
SIO_000300: 2.33638e6

ClippingRankSum
type: SiteQuality
SIO_000300: -9.52e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.35e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

FS
type: SiteQuality
SIO_000300: 1.2097e1

MQRankSum
type: SiteQuality
SIO_000300: 1.67e0

GenotypeQuality
all individuals: 2405
bin: 2.75e1
variant carriers: 6

GenotypeQuality
all individuals: 1505
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 477
bin: 2.5e0
variant carriers: 3

GenotypeQuality
all individuals: 471
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variant carriers: 3

GenotypeQuality
all individuals: 1859
bin: 3.75e1
variant carriers: 6

GenotypeQuality
all individuals: 2889
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variant carriers: 1

GenotypeQuality
all individuals: 6088
bin: 9.75e1
variant carriers: 16

GenotypeQuality
all individuals: 5793
bin: 6.75e1
variant carriers: 2

GenotypeQuality
all individuals: 139
bin: 5.75e1
variant carriers: 4

GenotypeQuality
all individuals: 1183
bin: 8.75e1
variant carriers: 3

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 858
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.185395922238028e-4
allele num: 8436
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11260
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.191895113230036e-4
allele num: 8390
num of homozygotes: 0

South Asian
type: Population
allele count: 27
allele frequency: 1.732323880405492e-3
allele num: 15586
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6036
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 17
allele frequency: 2.640981823830977e-4
allele num: 64370
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.58e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.6e-3

MQRankSum
type: SiteQuality
SIO_000300: 2.9e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.51e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.337e0

MQ
type: SiteQuality
SIO_000300: 5.928e1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.1e-1

DP
type: SiteQuality
SIO_000300: 2.369295e6

FS
type: SiteQuality
SIO_000300: 7.95e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.9e-1

GenotypeQuality
all individuals: 896
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 953
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1500
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1277
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4686
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1172
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6075
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2269
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2813
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2619
bin: 3.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10726
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8136
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 822
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6168
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14502
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6850
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.610046691354049e-5
allele num: 62110
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-3

MQ
type: SiteQuality
SIO_000300: 5.841e1

VQSLOD
type: SiteQuality
SIO_000300: -2.399e0

FS
type: SiteQuality
SIO_000300: 1.5276e1

MQRankSum
type: SiteQuality
SIO_000300: -3.6e-2

DP
type: SiteQuality
SIO_000300: 2.385689e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.55e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.01e-1

QD
type: SiteQuality
SIO_000300: 1.204e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.96e0

GenotypeQuality
all individuals: 1242
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1269
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2303
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1809
bin: 3.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1211
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2009
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1162
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1962
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2359
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4769
bin: 9.75e1
variant carriers: 4

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9906
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 8.054123711340206e-5
allele num: 12416
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 734
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.645278051990786e-4
allele num: 6078
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 8.620392400262059e-5
allele num: 58002
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5390
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7812
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.899e0

DP
type: SiteQuality
SIO_000300: 2.396329e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.19e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.16e-1

FS
type: SiteQuality
SIO_000300: 4.4595e1

VQSLOD
type: SiteQuality
SIO_000300: -3.754e0

MQ
type: SiteQuality
SIO_000300: 5.896e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.85e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 1.22e0

QD
type: SiteQuality
SIO_000300: 1.21e0

GenotypeQuality
all individuals: 4380
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1162
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1269
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4769
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1211
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2359
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2303
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2009
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 17601
bin: 6.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1835
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.855287569573284e-4
allele num: 5390
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.280081925243216e-4
allele num: 7812
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.645278051990786e-4
allele num: 6078
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.724078480052412e-5
allele num: 58002
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12416
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 734
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.85e-2

QD
type: SiteQuality
SIO_000300: 1.21e0

MQRankSum
type: SiteQuality
SIO_000300: 1.16e-1

MQ
type: SiteQuality
SIO_000300: 5.896e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.899e0

DP
type: SiteQuality
SIO_000300: 2.396329e6

FS
type: SiteQuality
SIO_000300: 4.4595e1

VQSLOD
type: SiteQuality
SIO_000300: -3.754e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.19e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.22e0

GenotypeQuality
all individuals: 2269
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1756
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2313
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2876
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1755
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1196
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 901
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1602
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2798
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1296
bin: 2.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5214
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5940
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 58160
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7540
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9942
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.155123068116771e-5
allele num: 13976
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 782
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.38e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.0e-2

DP
type: SiteQuality
SIO_000300: 2.408401e6

VQSLOD
type: SiteQuality
SIO_000300: -6.328e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.01e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.299999999999999e-3

FS
type: SiteQuality
SIO_000300: 4.157e0

QD
type: SiteQuality
SIO_000300: 2.41e0

MQRankSum
type: SiteQuality
SIO_000300: 6.4e-2

MQ
type: SiteQuality
SIO_000300: 5.882e1

GenotypeQuality
all individuals: 1071
bin: 2.5e0
variant carriers: 1

GenotypeQuality
all individuals: 1546
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1602
bin: 5.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1756
bin: 1.25e1
variant carriers: 3

GenotypeQuality
all individuals: 901
bin: 4.25e1
variant carriers: 1

GenotypeQuality
all individuals: 5026
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2269
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1554
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6080
bin: 9.75e1
variant carriers: 9

GenotypeQuality
all individuals: 2313
bin: 8.25e1
variant carriers: 2

South Asian
type: Population
allele count: 20
allele frequency: 1.431024613623354e-3
allele num: 13976
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9942
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5214
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5940
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.71939477303989e-5
allele num: 58160
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7540
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 782
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.882e1

VQSLOD
type: SiteQuality
SIO_000300: -6.328e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.4e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 2.01e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.299999999999999e-3

QD
type: SiteQuality
SIO_000300: 2.41e0

FS
type: SiteQuality
SIO_000300: 4.157e0

DP
type: SiteQuality
SIO_000300: 2.408401e6

ClippingRankSum
type: SiteQuality
SIO_000300: -5.0e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.38e-1

GenotypeQuality
all individuals: 6096
bin: 9.75e1
variant carriers: 13

GenotypeQuality
all individuals: 2337
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2302
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1559
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 847
bin: 2.5e0
variant carriers: 1

GenotypeQuality
all individuals: 3492
bin: 7.5e0
variant carriers: 6

GenotypeQuality
all individuals: 17961
bin: 6.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1763
bin: 3.25e1
variant carriers: 2

GenotypeQuality
all individuals: 1203
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5167
bin: 6.75e1
variant carriers: 1

African
type: Population
allele count: 1
allele frequency: 1.774937877174299e-4
allele num: 5634
num of homozygotes: 0

South Asian
type: Population
allele count: 11
allele frequency: 7.773851590106007e-4
allele num: 14150
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 9.916699722332408e-5
allele num: 10084
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 14
allele frequency: 2.37836368578418e-4
allele num: 58864
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7620
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.66333998669328e-4
allele num: 6012
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 790
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.45e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.49e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.2e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 3.66e-1

MQRankSum
type: SiteQuality
SIO_000300: -4.2e-2

VQSLOD
type: SiteQuality
SIO_000300: -4.182e-1

FS
type: SiteQuality
SIO_000300: 4.74e0

DP
type: SiteQuality
SIO_000300: 2.41276e6

MQ
type: SiteQuality
SIO_000300: 5.945e1

QD
type: SiteQuality
SIO_000300: 1.86e0

GenotypeQuality
all individuals: 1120
bin: 7.5e0
variant carriers: 793

GenotypeQuality
all individuals: 979
bin: 5.25e1
variant carriers: 557

GenotypeQuality
all individuals: 1299
bin: 7.25e1
variant carriers: 405

GenotypeQuality
all individuals: 1106
bin: 8.25e1
variant carriers: 357

GenotypeQuality
all individuals: 855
bin: 9.25e1
variant carriers: 307

GenotypeQuality
all individuals: 1142
bin: 3.75e1
variant carriers: 700

GenotypeQuality
all individuals: 1245
bin: 2.25e1
variant carriers: 767

GenotypeQuality
all individuals: 2190
bin: 6.75e1
variant carriers: 436

GenotypeQuality
all individuals: 1110
bin: 3.25e1
variant carriers: 677

GenotypeQuality
all individuals: 1256
bin: 7.75e1
variant carriers: 345

Latino
type: Population
allele count: 4054
allele frequency: 3.868320610687023e-1
allele num: 10480
num of homozygotes: 475

South Asian
type: Population
allele count: 3884
allele frequency: 2.929993964996983e-1
allele num: 13256
num of homozygotes: 288

European (Non-Finnish)
type: Population
allele count: 21066
allele frequency: 3.529470897697953e-1
allele num: 59686
num of homozygotes: 2136

African
type: Population
allele count: 4032
allele frequency: 5.21064874644611e-1
allele num: 7738
num of homozygotes: 725

East Asian
type: Population
allele count: 2796
allele frequency: 3.500250375563345e-1
allele num: 7988
num of homozygotes: 252

European (Finnish)
type: Population
allele count: 2006
allele frequency: 3.242806336889751e-1
allele num: 6186
num of homozygotes: 197

Other
type: Population
allele count: 275
allele frequency: 3.4375e-1
allele num: 800
num of homozygotes: 30

VQSLOD
type: SiteQuality
SIO_000300: 9.1e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 6.19e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.138e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.12e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.128e0

MQ
type: SiteQuality
SIO_000300: 5.923e1

FS
type: SiteQuality
SIO_000300: 3.792e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.7e-1

DP
type: SiteQuality
SIO_000300: 2.261946e6

QD
type: SiteQuality
SIO_000300: 1.168e1

GenotypeQuality
all individuals: 1142
bin: 3.75e1
variant carriers: 6

GenotypeQuality
all individuals: 987
bin: 4.25e1
variant carriers: 4

GenotypeQuality
all individuals: 1106
bin: 8.25e1
variant carriers: 2

GenotypeQuality
all individuals: 29985
bin: 9.75e1
variant carriers: 125

GenotypeQuality
all individuals: 1002
bin: 4.75e1
variant carriers: 3

GenotypeQuality
all individuals: 2190
bin: 6.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1299
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1120
bin: 7.5e0
variant carriers: 8

GenotypeQuality
all individuals: 1256
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1245
bin: 2.25e1
variant carriers: 3

African
type: Population
allele count: 26
allele frequency: 3.360041354355131e-3
allele num: 7738
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 85
allele frequency: 1.424119559025567e-3
allele num: 59686
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 3
allele frequency: 4.849660523763337e-4
allele num: 6186
num of homozygotes: 0

South Asian
type: Population
allele count: 23
allele frequency: 1.735063367531684e-3
allele num: 13256
num of homozygotes: 0

Latino
type: Population
allele count: 5
allele frequency: 4.770992366412214e-4
allele num: 10480
num of homozygotes: 0

East Asian
type: Population
allele count: 13
allele frequency: 1.627441161742614e-3
allele num: 7988
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.25e-3
allele num: 800
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.138e-1

FS
type: SiteQuality
SIO_000300: 3.792e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.128e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.7e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.19e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.12e-1

QD
type: SiteQuality
SIO_000300: 1.168e1

VQSLOD
type: SiteQuality
SIO_000300: 9.1e-2

DP
type: SiteQuality
SIO_000300: 2.261946e6

MQ
type: SiteQuality
SIO_000300: 5.923e1

GenotypeQuality
all individuals: 979
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1245
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1142
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 987
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1110
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1002
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1106
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1034
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 855
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 797
bin: 5.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6186
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 9.541984732824427e-5
allele num: 10480
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7738
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7988
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13256
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.25e-3
allele num: 800
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.675434775324197e-5
allele num: 59686
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.12e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.7e-1

MQ
type: SiteQuality
SIO_000300: 5.923e1

VQSLOD
type: SiteQuality
SIO_000300: 9.1e-2

FS
type: SiteQuality
SIO_000300: 3.792e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.128e0

QD
type: SiteQuality
SIO_000300: 1.168e1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.19e-1

DP
type: SiteQuality
SIO_000300: 2.261946e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.138e-1

GenotypeQuality
all individuals: 7772
bin: 6.25e1
variant carriers: 2

GenotypeQuality
all individuals: 797
bin: 5.75e1
variant carriers: 5

GenotypeQuality
all individuals: 3413
bin: 2.5e0
variant carriers: 3

GenotypeQuality
all individuals: 987
bin: 4.25e1
variant carriers: 3

GenotypeQuality
all individuals: 1106
bin: 8.25e1
variant carriers: 2

GenotypeQuality
all individuals: 29985
bin: 9.75e1
variant carriers: 142

GenotypeQuality
all individuals: 1245
bin: 2.25e1
variant carriers: 13

GenotypeQuality
all individuals: 979
bin: 5.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1127
bin: 2.75e1
variant carriers: 4

GenotypeQuality
all individuals: 855
bin: 9.25e1
variant carriers: 6

Latino
type: Population
allele count: 7
allele frequency: 6.679389312977099e-4
allele num: 10480
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 5
allele frequency: 8.082767539605561e-4
allele num: 6186
num of homozygotes: 0

South Asian
type: Population
allele count: 57
allele frequency: 4.299939649969825e-3
allele num: 13256
num of homozygotes: 1

East Asian
type: Population
allele count: 7
allele frequency: 8.763144717075614e-4
allele num: 7988
num of homozygotes: 0

African
type: Population
allele count: 9
allele frequency: 1.163091238046007e-3
allele num: 7738
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 117
allele frequency: 1.96025868712931e-3
allele num: 59686
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.25e-3
allele num: 800
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.792e0

MQ
type: SiteQuality
SIO_000300: 5.923e1

QD
type: SiteQuality
SIO_000300: 1.168e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.7e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.128e0

VQSLOD
type: SiteQuality
SIO_000300: 9.1e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 6.19e-1

DP
type: SiteQuality
SIO_000300: 2.261946e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.138e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.12e-1

GenotypeQuality
all individuals: 1106
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1142
bin: 3.75e1
variant carriers: 14

GenotypeQuality
all individuals: 797
bin: 5.75e1
variant carriers: 7

GenotypeQuality
all individuals: 1110
bin: 3.25e1
variant carriers: 17

GenotypeQuality
all individuals: 1127
bin: 2.75e1
variant carriers: 14

GenotypeQuality
all individuals: 1299
bin: 7.25e1
variant carriers: 5

GenotypeQuality
all individuals: 29985
bin: 9.75e1
variant carriers: 349

GenotypeQuality
all individuals: 1002
bin: 4.75e1
variant carriers: 10

GenotypeQuality
all individuals: 810
bin: 8.75e1
variant carriers: 5

GenotypeQuality
all individuals: 979
bin: 5.25e1
variant carriers: 9

African
type: Population
allele count: 304
allele frequency: 3.928663737399845e-2
allele num: 7738
num of homozygotes: 5

Other
type: Population
allele count: 3
allele frequency: 3.75e-3
allele num: 800
num of homozygotes: 0

East Asian
type: Population
allele count: 18
allele frequency: 2.253380070105158e-3
allele num: 7988
num of homozygotes: 0

South Asian
type: Population
allele count: 60
allele frequency: 4.526252263126132e-3
allele num: 13256
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 2
allele frequency: 3.233107015842225e-4
allele num: 6186
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 76
allele frequency: 1.273330429246389e-3
allele num: 59686
num of homozygotes: 1

Latino
type: Population
allele count: 10
allele frequency: 9.541984732824427e-4
allele num: 10480
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.19e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.138e-1

QD
type: SiteQuality
SIO_000300: 1.168e1

MQ
type: SiteQuality
SIO_000300: 5.923e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.128e0

VQSLOD
type: SiteQuality
SIO_000300: 9.1e-2

FS
type: SiteQuality
SIO_000300: 3.792e0

MQRankSum
type: SiteQuality
SIO_000300: 2.12e-1

DP
type: SiteQuality
SIO_000300: 2.261946e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.7e-1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10480
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 59686
num of homozygotes: 0

African
type: Population
allele count: 9
allele frequency: 1.163091238046007e-3
allele num: 7738
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.138e-1

DP
type: SiteQuality
SIO_000300: 2.261946e6

MQRankSum
type: SiteQuality
SIO_000300: 2.12e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.19e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.128e0

QD
type: SiteQuality
SIO_000300: 1.168e1

FS
type: SiteQuality
SIO_000300: 3.792e0

VQSLOD
type: SiteQuality
SIO_000300: 9.1e-2

MQ
type: SiteQuality
SIO_000300: 5.923e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.7e-1

GenotypeQuality
all individuals: 309
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 248
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 590
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 399
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 470
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 597
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 252
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7622
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 457
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 665
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3564
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 318
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2616
num of homozygotes: 0

South Asian
type: Population
allele count: 5
allele frequency: 7.229612492770387e-4
allele num: 6916
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 24288
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1342
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2876
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.079e0

MQRankSum
type: SiteQuality
SIO_000300: 5.15e-1

FS
type: SiteQuality
SIO_000300: 2.557e0

VQSLOD
type: SiteQuality
SIO_000300: 1.22e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.874e-1

MQ
type: SiteQuality
SIO_000300: 6.065e1

QD
type: SiteQuality
SIO_000300: 1.268e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.64e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.2e-2

DP
type: SiteQuality
SIO_000300: 3.213039e6

GenotypeQuality
all individuals: 330
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 903
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 399
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 457
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1060
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2038
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3978
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 7622
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 235
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1063
bin: 7.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 1.646903820816864e-4
allele num: 24288
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3564
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 318
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1342
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 3.477051460361613e-4
allele num: 2876
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6916
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2616
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.64e0

DP
type: SiteQuality
SIO_000300: 3.213039e6

MQRankSum
type: SiteQuality
SIO_000300: 5.15e-1

QD
type: SiteQuality
SIO_000300: 1.268e1

FS
type: SiteQuality
SIO_000300: 2.557e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.079e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.874e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.2e-2

MQ
type: SiteQuality
SIO_000300: 6.065e1

VQSLOD
type: SiteQuality
SIO_000300: 1.22e0

GenotypeQuality
all individuals: 2038
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7622
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 597
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 248
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 590
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 665
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 330
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 470
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 903
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 309
bin: 5.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 4.117259552042161e-5
allele num: 24288
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 4.337767495662232e-4
allele num: 6916
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3564
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2616
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 7.451564828614009e-4
allele num: 1342
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 318
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 3.477051460361613e-4
allele num: 2876
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.079e0

VQSLOD
type: SiteQuality
SIO_000300: 1.22e0

MQRankSum
type: SiteQuality
SIO_000300: 5.15e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.874e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.64e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.2e-2

FS
type: SiteQuality
SIO_000300: 2.557e0

DP
type: SiteQuality
SIO_000300: 3.213039e6

QD
type: SiteQuality
SIO_000300: 1.268e1

MQ
type: SiteQuality
SIO_000300: 6.065e1

GenotypeQuality
all individuals: 399
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1060
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 330
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 30034
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 457
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 590
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 665
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 597
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 328
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2038
bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 2.470355731225296e-4
allele num: 24288
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 2.805836139169473e-4
allele num: 3564
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 3.477051460361613e-4
allele num: 2876
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2616
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1342
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 2.891844997108155e-4
allele num: 6916
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 318
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.268e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.874e-1

MQ
type: SiteQuality
SIO_000300: 6.065e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.2e-2

MQRankSum
type: SiteQuality
SIO_000300: 5.15e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.079e0

VQSLOD
type: SiteQuality
SIO_000300: 1.22e0

FS
type: SiteQuality
SIO_000300: 2.557e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.64e0

DP
type: SiteQuality
SIO_000300: 3.213039e6

GenotypeQuality
all individuals: 844
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 741
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 454
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 440
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 571
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 493
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3274
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 385
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24508
bin: 9.75e1
variant carriers: 14

GenotypeQuality
all individuals: 3576
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11438
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 11
allele frequency: 1.670361709235582e-4
allele num: 65854
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9048
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6576
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.285355122564425e-5
allele num: 15910
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.355157795572303e-4
allele num: 8492
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.31e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.6e0

DP
type: SiteQuality
SIO_000300: 2.743675e6

FS
type: SiteQuality
SIO_000300: 2.573e0

MQRankSum
type: SiteQuality
SIO_000300: 9.05e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.44e0

QD
type: SiteQuality
SIO_000300: 1.443e1

MQ
type: SiteQuality
SIO_000300: 6.071e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.269e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.08e-1

GenotypeQuality
all individuals: 4566
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 493
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 129
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 385
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 348
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3576
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2387
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 198
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 526
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24508
bin: 9.75e1
variant carriers: 4

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11438
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6576
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.03702128951924e-5
allele num: 65854
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9048
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.257071024512885e-4
allele num: 15910
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8492
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 9.05e-1

QD
type: SiteQuality
SIO_000300: 1.443e1

DP
type: SiteQuality
SIO_000300: 2.743675e6

VQSLOD
type: SiteQuality
SIO_000300: 1.44e0

MQ
type: SiteQuality
SIO_000300: 6.071e1

FS
type: SiteQuality
SIO_000300: 2.573e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.31e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 2.08e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.6e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.269e0

GenotypeQuality
all individuals: 348
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 198
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 129
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3576
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 526
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3108
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4566
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10996
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 385
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24508
bin: 9.75e1
variant carriers: 14

East Asian
type: Population
allele count: 1
allele frequency: 1.177578897786152e-4
allele num: 8492
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6576
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

African
type: Population
allele count: 9
allele frequency: 9.946949602122016e-4
allele num: 9048
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.885606536769328e-4
allele num: 15910
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65854
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.742787200559538e-5
allele num: 11438
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.443e1

MQRankSum
type: SiteQuality
SIO_000300: 9.05e-1

FS
type: SiteQuality
SIO_000300: 2.573e0

DP
type: SiteQuality
SIO_000300: 2.743675e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.6e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.08e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.31e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.44e0

MQ
type: SiteQuality
SIO_000300: 6.071e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.269e0

GenotypeQuality
all individuals: 24508
bin: 9.75e1
variant carriers: 72

GenotypeQuality
all individuals: 571
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 493
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10996
bin: 6.25e1
variant carriers: 1

GenotypeQuality
all individuals: 168
bin: 1.75e1
variant carriers: 1

GenotypeQuality
all individuals: 348
bin: 4.25e1
variant carriers: 1

GenotypeQuality
all individuals: 2387
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3576
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3108
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2819
bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.742787200559538e-5
allele num: 11438
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 68
allele frequency: 1.032587238436542e-3
allele num: 65854
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 3.315649867374005e-4
allele num: 9048
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8492
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6576
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.885606536769328e-4
allele num: 15910
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.31e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 2.08e-1

DP
type: SiteQuality
SIO_000300: 2.743675e6

MQ
type: SiteQuality
SIO_000300: 6.071e1

QD
type: SiteQuality
SIO_000300: 1.443e1

FS
type: SiteQuality
SIO_000300: 2.573e0

MQRankSum
type: SiteQuality
SIO_000300: 9.05e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.269e0

VQSLOD
type: SiteQuality
SIO_000300: 1.44e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.6e0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9048
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.355157795572303e-4
allele num: 8492
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.269e0

MQ
type: SiteQuality
SIO_000300: 6.071e1

FS
type: SiteQuality
SIO_000300: 2.573e0

MQRankSum
type: SiteQuality
SIO_000300: 9.05e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.6e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.08e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.31e-2

DP
type: SiteQuality
SIO_000300: 2.743675e6

VQSLOD
type: SiteQuality
SIO_000300: 1.44e0

QD
type: SiteQuality
SIO_000300: 1.443e1

Latino
type: Population
allele count: 2
allele frequency: 1.736412571627018e-4
allele num: 11518
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 12
allele frequency: 1.812141347025068e-4
allele num: 66220
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.009646302250804e-4
allele num: 9952
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.551e1

MQRankSum
type: SiteQuality
SIO_000300: 4.2e-1

DP
type: SiteQuality
SIO_000300: 2.723999e6

ClippingRankSum
type: SiteQuality
SIO_000300: -2.041e0

FS
type: SiteQuality
SIO_000300: 2.777e0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.7e-2

MQ
type: SiteQuality
SIO_000300: 6.019e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.03e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.07e-2

VQSLOD
type: SiteQuality
SIO_000300: 6.16e-1

GenotypeQuality
all individuals: 3426
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 82
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 395
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 444
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3743
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11625
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2454
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3213
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 263
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4863
bin: 6.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8558
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9952
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11518
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.510117789187557e-5
allele num: 66220
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6588
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16368
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.041e0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.7e-2

FS
type: SiteQuality
SIO_000300: 2.777e0

MQRankSum
type: SiteQuality
SIO_000300: 4.2e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.16e-1

DP
type: SiteQuality
SIO_000300: 2.723999e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.07e-2

QD
type: SiteQuality
SIO_000300: 1.551e1

MQ
type: SiteQuality
SIO_000300: 6.019e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.03e0

GenotypeQuality
all individuals: 25100
bin: 9.75e1
variant carriers: 11

GenotypeQuality
all individuals: 3426
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 388
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3743
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 123
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4863
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3213
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 258
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2983
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 201
bin: 4.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.550588945937783e-5
allele num: 66220
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.682062858135092e-5
allele num: 11518
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16368
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.004823151125402e-4
allele num: 9952
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 2
allele frequency: 3.035822707953856e-4
allele num: 6588
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.336994624912363e-4
allele num: 8558
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 6.16e-1

FS
type: SiteQuality
SIO_000300: 2.777e0

QD
type: SiteQuality
SIO_000300: 1.551e1

MQ
type: SiteQuality
SIO_000300: 6.019e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.041e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.07e-2

DP
type: SiteQuality
SIO_000300: 2.723999e6

MQRankSum
type: SiteQuality
SIO_000300: 4.2e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.03e0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.7e-2

GenotypeQuality
all individuals: 4863
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25100
bin: 9.75e1
variant carriers: 75

GenotypeQuality
all individuals: 395
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 82
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 123
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3213
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 2983
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 135
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 775
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2454
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 5
allele frequency: 4.341031429067547e-4
allele num: 11518
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8558
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6588
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

African
type: Population
allele count: 34
allele frequency: 3.416398713826367e-3
allele num: 9952
num of homozygotes: 0

South Asian
type: Population
allele count: 4
allele frequency: 2.443792766373412e-4
allele num: 16368
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 32
allele frequency: 4.832376925400181e-4
allele num: 66220
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 4.2e-1

FS
type: SiteQuality
SIO_000300: 2.777e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.03e0

QD
type: SiteQuality
SIO_000300: 1.551e1

VQSLOD
type: SiteQuality
SIO_000300: 6.16e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.7e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.07e-2

MQ
type: SiteQuality
SIO_000300: 6.019e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.041e0

DP
type: SiteQuality
SIO_000300: 2.723999e6

GenotypeQuality
all individuals: 3426
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 123
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2983
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 444
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25100
bin: 9.75e1
variant carriers: 75

GenotypeQuality
all individuals: 3213
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 135
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2454
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11625
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 395
bin: 3.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 6
allele frequency: 9.107468123861566e-4
allele num: 6588
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9952
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8558
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 58
allele frequency: 8.758683177287829e-4
allele num: 66220
num of homozygotes: 0

South Asian
type: Population
allele count: 10
allele frequency: 6.109481915933529e-4
allele num: 16368
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.682062858135092e-5
allele num: 11518
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 4.2e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.041e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.07e-2

VQSLOD
type: SiteQuality
SIO_000300: 6.16e-1

DP
type: SiteQuality
SIO_000300: 2.723999e6

BaseQRankSum
type: SiteQuality
SIO_000300: -7.7e-2

FS
type: SiteQuality
SIO_000300: 2.777e0

QD
type: SiteQuality
SIO_000300: 1.551e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.03e0

MQ
type: SiteQuality
SIO_000300: 6.019e1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8558
num of homozygotes: 0

South Asian
type: Population
allele count: 8
allele frequency: 4.887585532746823e-4
allele num: 16368
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.510117789187557e-5
allele num: 66220
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.03e0

FS
type: SiteQuality
SIO_000300: 2.777e0

VQSLOD
type: SiteQuality
SIO_000300: 6.16e-1

MQ
type: SiteQuality
SIO_000300: 6.019e1

MQRankSum
type: SiteQuality
SIO_000300: 4.2e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.041e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.07e-2

QD
type: SiteQuality
SIO_000300: 1.551e1

DP
type: SiteQuality
SIO_000300: 2.723999e6

BaseQRankSum
type: SiteQuality
SIO_000300: -7.7e-2