20-32217737-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32217737
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 32217737
    reference: chr 20
allele count: 1133
allele frequency: 1.104073280062366e-2
allele num: 102620
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000433270
  ensembl transcript: ENST00000492345
  gene symbol: CBFA2T2
  hgvsc: ENST00000492345.1:c.1168+17C>T
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000364428
  ensembl transcript: ENST00000375279
  gene symbol: CBFA2T2
  hgvsc: ENST00000375279.2:c.1255+17C>T
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000380902
  ensembl transcript: ENST00000397800
  gene symbol: CBFA2T2
  hgvsc: ENST00000397800.1:c.1168+17C>T
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl transcript: ENST00000491618
  gene symbol: CBFA2T2
  hgvsc: ENST00000491618.1:n.842+17C>T
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000262653
  ensembl transcript: ENST00000346541
  gene symbol: CBFA2T2
  hgvsc: ENST00000346541.3:c.1255+17C>T
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000352622
  ensembl transcript: ENST00000359606
  gene symbol: CBFA2T2
  hgvsc: ENST00000359606.3:c.1285+17C>T
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000345810
  ensembl transcript: ENST00000342704
  gene symbol: CBFA2T2
  hgvsc: ENST00000342704.6:c.1228+17C>T
  variant of: http://identifiers.org/hgnc/1536
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 6.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 15260
  bin: 2.75e1
  variant carriers: 246
genotype depth: GenotypeDepth
  all individuals: 8408
  bin: 7.5e0
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3696
  bin: 1.75e1
  variant carriers: 211
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 4.25e1
  variant carriers: 37
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4219
  bin: 3.25e1
  variant carriers: 136
genotype depth: GenotypeDepth
  all individuals: 818
  bin: 3.75e1
  variant carriers: 78
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 5.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 17961
  bin: 1.25e1
  variant carriers: 97
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 5.25e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 8556
  bin: 2.25e1
  variant carriers: 234
genotype depth: GenotypeDepth
  all individuals: 485
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 4.75e1
  variant carriers: 28
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 480
  bin: 4.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 283
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 19071
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1823
  bin: 3.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 576
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21809
  bin: 6.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 2162
  bin: 9.75e1
  variant carriers: 1089
genotype quality: GenotypeQuality
  all individuals: 4006
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 425
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 227
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 13
population: South Asian
population: European (Finnish)
population: African
population: East Asian
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ

20-32217738-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32217738
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 32217738
    reference: chr 20
allele count: 4
allele frequency: 3.928501276762915e-5
allele num: 101820
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000364428
  ensembl transcript: ENST00000375279
  gene symbol: CBFA2T2
  hgvsc: ENST00000375279.2:c.1255+18G>A
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000352622
  ensembl transcript: ENST00000359606
  gene symbol: CBFA2T2
  hgvsc: ENST00000359606.3:c.1285+18G>A
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl transcript: ENST00000491618
  gene symbol: CBFA2T2
  hgvsc: ENST00000491618.1:n.842+18G>A
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000433270
  ensembl transcript: ENST00000492345
  gene symbol: CBFA2T2
  hgvsc: ENST00000492345.1:c.1168+18G>A
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000262653
  ensembl transcript: ENST00000346541
  gene symbol: CBFA2T2
  hgvsc: ENST00000346541.3:c.1255+18G>A
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000380902
  ensembl transcript: ENST00000397800
  gene symbol: CBFA2T2
  hgvsc: ENST00000397800.1:c.1168+18G>A
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000345810
  ensembl transcript: ENST00000342704
  gene symbol: CBFA2T2
  hgvsc: ENST00000342704.6:c.1228+18G>A
  variant of: http://identifiers.org/hgnc/1536
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3612
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3721
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8498
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 693
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18974
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8825
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 422
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14654
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 558
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 435
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 127
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1095
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 298
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 516
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 596
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 492
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4333
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 180
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: African
population: South Asian
reference allele: G
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum

20-32217740-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32217740
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 32217740
    reference: chr 20
allele count: 1
allele frequency: 9.907660603178378e-6
allele num: 100932
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000345810
  ensembl transcript: ENST00000342704
  gene symbol: CBFA2T2
  hgvsc: ENST00000342704.6:c.1228+20G>C
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000364428
  ensembl transcript: ENST00000375279
  gene symbol: CBFA2T2
  hgvsc: ENST00000375279.2:c.1255+20G>C
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000433270
  ensembl transcript: ENST00000492345
  gene symbol: CBFA2T2
  hgvsc: ENST00000492345.1:c.1168+20G>C
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl transcript: ENST00000491618
  gene symbol: CBFA2T2
  hgvsc: ENST00000491618.1:n.842+20G>C
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000380902
  ensembl transcript: ENST00000397800
  gene symbol: CBFA2T2
  hgvsc: ENST00000397800.1:c.1168+20G>C
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000352622
  ensembl transcript: ENST00000359606
  gene symbol: CBFA2T2
  hgvsc: ENST00000359606.3:c.1285+20G>C
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000262653
  ensembl transcript: ENST00000346541
  gene symbol: CBFA2T2
  hgvsc: ENST00000346541.3:c.1255+20G>C
  variant of: http://identifiers.org/hgnc/1536
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 20145
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9243
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3867
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 642
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3296
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 661
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13415
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8254
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20003
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 482
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 179
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 292
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 503
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 231
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2659
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 284
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 124
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: South Asian
population: East Asian
reference allele: G
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: ReadPosRankSum

20-32217746-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32217746
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 32217746
    reference: chr 20
allele count: 1
allele frequency: 1.021304409992442e-5
allele num: 97914
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000262653
  ensembl transcript: ENST00000346541
  gene symbol: CBFA2T2
  hgvsc: ENST00000346541.3:c.1255+26C>T
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000352622
  ensembl transcript: ENST00000359606
  gene symbol: CBFA2T2
  hgvsc: ENST00000359606.3:c.1285+26C>T
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000364428
  ensembl transcript: ENST00000375279
  gene symbol: CBFA2T2
  hgvsc: ENST00000375279.2:c.1255+26C>T
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl transcript: ENST00000491618
  gene symbol: CBFA2T2
  hgvsc: ENST00000491618.1:n.842+26C>T
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000380902
  ensembl transcript: ENST00000397800
  gene symbol: CBFA2T2
  hgvsc: ENST00000397800.1:c.1168+26C>T
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000345810
  ensembl transcript: ENST00000342704
  gene symbol: CBFA2T2
  hgvsc: ENST00000342704.6:c.1228+26C>T
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000433270
  ensembl transcript: ENST00000492345
  gene symbol: CBFA2T2
  hgvsc: ENST00000492345.1:c.1168+26C>T
  variant of: http://identifiers.org/hgnc/1536
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9895
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6550
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1089
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9996
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2473
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5299
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23632
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 469
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1879
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1317
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 437
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 685
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 496
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 477
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6323
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 344
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 177
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Latino
population: African
population: Other
reference allele: C
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum

20-32217747-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32217747
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 32217747
    reference: chr 20
allele count: 1
allele frequency: 1.020991587029323e-5
allele num: 97944
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000380902
  ensembl transcript: ENST00000397800
  gene symbol: CBFA2T2
  hgvsc: ENST00000397800.1:c.1168+27A>G
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000433270
  ensembl transcript: ENST00000492345
  gene symbol: CBFA2T2
  hgvsc: ENST00000492345.1:c.1168+27A>G
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000352622
  ensembl transcript: ENST00000359606
  gene symbol: CBFA2T2
  hgvsc: ENST00000359606.3:c.1285+27A>G
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl transcript: ENST00000491618
  gene symbol: CBFA2T2
  hgvsc: ENST00000491618.1:n.842+27A>G
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000262653
  ensembl transcript: ENST00000346541
  gene symbol: CBFA2T2
  hgvsc: ENST00000346541.3:c.1255+27A>G
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000345810
  ensembl transcript: ENST00000342704
  gene symbol: CBFA2T2
  hgvsc: ENST00000342704.6:c.1228+27A>G
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000364428
  ensembl transcript: ENST00000375279
  gene symbol: CBFA2T2
  hgvsc: ENST00000375279.2:c.1255+27A>G
  variant of: http://identifiers.org/hgnc/1536
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2365
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1198
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24259
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9359
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6069
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5563
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10130
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 399
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 316
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14295
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 247
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1418
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 488
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 424
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 147
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 177
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 287
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 479
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: Other
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
reference allele: A
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP

20-32217759-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32217759
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 32217759
    reference: chr 20
allele count: 3
allele frequency: 3.461005999077065e-5
allele num: 86680
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000433270
  ensembl transcript: ENST00000492345
  gene symbol: CBFA2T2
  hgvsc: ENST00000492345.1:c.1168+39A>G
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000380902
  ensembl transcript: ENST00000397800
  gene symbol: CBFA2T2
  hgvsc: ENST00000397800.1:c.1168+39A>G
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000352622
  ensembl transcript: ENST00000359606
  gene symbol: CBFA2T2
  hgvsc: ENST00000359606.3:c.1285+39A>G
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000364428
  ensembl transcript: ENST00000375279
  gene symbol: CBFA2T2
  hgvsc: ENST00000375279.2:c.1255+39A>G
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl transcript: ENST00000491618
  gene symbol: CBFA2T2
  hgvsc: ENST00000491618.1:n.842+39A>G
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000345810
  ensembl transcript: ENST00000342704
  gene symbol: CBFA2T2
  hgvsc: ENST00000342704.6:c.1228+39A>G
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000262653
  ensembl transcript: ENST00000346541
  gene symbol: CBFA2T2
  hgvsc: ENST00000346541.3:c.1255+39A>G
  variant of: http://identifiers.org/hgnc/1536
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1067
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12465
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2664
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23387
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 518
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2452
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13971
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2984
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9034
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3222
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 174
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2297
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2099
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 768
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 808
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6154
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17871
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6203
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: Latino
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: A
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD

20-32217765-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32217765
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 32217765
    reference: chr 20
allele count: 1
allele frequency: 1.188919272381405e-5
allele num: 84110
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000262653
  ensembl transcript: ENST00000346541
  gene symbol: CBFA2T2
  hgvsc: ENST00000346541.3:c.1255+45T>C
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000352622
  ensembl transcript: ENST00000359606
  gene symbol: CBFA2T2
  hgvsc: ENST00000359606.3:c.1285+45T>C
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000380902
  ensembl transcript: ENST00000397800
  gene symbol: CBFA2T2
  hgvsc: ENST00000397800.1:c.1168+45T>C
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000364428
  ensembl transcript: ENST00000375279
  gene symbol: CBFA2T2
  hgvsc: ENST00000375279.2:c.1255+45T>C
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000433270
  ensembl transcript: ENST00000492345
  gene symbol: CBFA2T2
  hgvsc: ENST00000492345.1:c.1168+45T>C
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl transcript: ENST00000491618
  gene symbol: CBFA2T2
  hgvsc: ENST00000491618.1:n.842+45T>C
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000345810
  ensembl transcript: ENST00000342704
  gene symbol: CBFA2T2
  hgvsc: ENST00000342704.6:c.1228+45T>C
  variant of: http://identifiers.org/hgnc/1536
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15509
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 872
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11915
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2035
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2554
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22392
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3732
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2175
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9012
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2641
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 241
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 388
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1083
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3669
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 286
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 117
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17388
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: South Asian
population: East Asian
reference allele: T
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: ClippingRankSum

20-32224398-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32224398
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 32224398
    reference: chr 20
allele count: 6
allele frequency: 4.963436021309685e-5
allele num: 120884
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000352622
  ensembl transcript: ENST00000359606
  gene symbol: CBFA2T2
  hgvsc: ENST00000359606.3:c.1286-48T>C
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000262653
  ensembl transcript: ENST00000346541
  gene symbol: CBFA2T2
  hgvsc: ENST00000346541.3:c.1256-48T>C
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000364428
  ensembl transcript: ENST00000375279
  gene symbol: CBFA2T2
  hgvsc: ENST00000375279.2:c.1256-48T>C
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000380902
  ensembl transcript: ENST00000397800
  gene symbol: CBFA2T2
  hgvsc: ENST00000397800.1:c.1169-48T>C
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000345810
  ensembl transcript: ENST00000342704
  gene symbol: CBFA2T2
  hgvsc: ENST00000342704.6:c.1229-48T>C
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000433270
  ensembl transcript: ENST00000492345
  gene symbol: CBFA2T2
  hgvsc: ENST00000492345.1:c.1169-48T>C
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl transcript: ENST00000491618
  gene symbol: CBFA2T2
  hgvsc: ENST00000491618.1:n.843-48T>C
  variant of: http://identifiers.org/hgnc/1536
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4040
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7743
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5471
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2397
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 778
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7632
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5356
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1239
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2643
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7045
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2777
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1782
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1371
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7299
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 642
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 944
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 775
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 375
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 306
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6717
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 500
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 330
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 181
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: African
reference allele: T
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ

20-32224398-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32224398
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 32224398
    reference: chr 20
allele count: 1
allele frequency: 8.272393368849475e-6
allele num: 120884
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000433270
  ensembl transcript: ENST00000492345
  gene symbol: CBFA2T2
  hgvsc: ENST00000492345.1:c.1169-48T>G
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000364428
  ensembl transcript: ENST00000375279
  gene symbol: CBFA2T2
  hgvsc: ENST00000375279.2:c.1256-48T>G
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl transcript: ENST00000491618
  gene symbol: CBFA2T2
  hgvsc: ENST00000491618.1:n.843-48T>G
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000352622
  ensembl transcript: ENST00000359606
  gene symbol: CBFA2T2
  hgvsc: ENST00000359606.3:c.1286-48T>G
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000380902
  ensembl transcript: ENST00000397800
  gene symbol: CBFA2T2
  hgvsc: ENST00000397800.1:c.1169-48T>G
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000262653
  ensembl transcript: ENST00000346541
  gene symbol: CBFA2T2
  hgvsc: ENST00000346541.3:c.1256-48T>G
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000345810
  ensembl transcript: ENST00000342704
  gene symbol: CBFA2T2
  hgvsc: ENST00000342704.6:c.1229-48T>G
  variant of: http://identifiers.org/hgnc/1536
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 944
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7743
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 775
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7045
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 778
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7299
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2777
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2643
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1782
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2397
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1239
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4040
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5471
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 642
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7632
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1371
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5356
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 330
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 413
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 306
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6717
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 251
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 181
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: South Asian
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
reference allele: T
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD

20-32224402-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32224402
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 32224402
    reference: chr 20
allele count: 2
allele frequency: 1.654697686732634e-5
allele num: 120868
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000364428
  ensembl transcript: ENST00000375279
  gene symbol: CBFA2T2
  hgvsc: ENST00000375279.2:c.1256-44C>T
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl transcript: ENST00000491618
  gene symbol: CBFA2T2
  hgvsc: ENST00000491618.1:n.843-44C>T
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000380902
  ensembl transcript: ENST00000397800
  gene symbol: CBFA2T2
  hgvsc: ENST00000397800.1:c.1169-44C>T
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000262653
  ensembl transcript: ENST00000346541
  gene symbol: CBFA2T2
  hgvsc: ENST00000346541.3:c.1256-44C>T
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000433270
  ensembl transcript: ENST00000492345
  gene symbol: CBFA2T2
  hgvsc: ENST00000492345.1:c.1169-44C>T
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000352622
  ensembl transcript: ENST00000359606
  gene symbol: CBFA2T2
  hgvsc: ENST00000359606.3:c.1286-44C>T
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000345810
  ensembl transcript: ENST00000342704
  gene symbol: CBFA2T2
  hgvsc: ENST00000342704.6:c.1229-44C>T
  variant of: http://identifiers.org/hgnc/1536
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2916
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 887
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 944
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7744
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7639
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7046
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 751
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5442
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5471
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7320
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 642
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2393
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2777
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1370
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 775
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1782
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4040
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 238
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3585
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3415
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 300
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1946
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 393
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: East Asian
population: South Asian
population: Other
reference allele: C
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD

20-32224405-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32224405
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 32224405
    reference: chr 20
allele count: 7
allele frequency: 5.789525920534621e-5
allele num: 120908
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000352622
  ensembl transcript: ENST00000359606
  gene symbol: CBFA2T2
  hgvsc: ENST00000359606.3:c.1286-41A>G
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000380902
  ensembl transcript: ENST00000397800
  gene symbol: CBFA2T2
  hgvsc: ENST00000397800.1:c.1169-41A>G
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl transcript: ENST00000491618
  gene symbol: CBFA2T2
  hgvsc: ENST00000491618.1:n.843-41A>G
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000345810
  ensembl transcript: ENST00000342704
  gene symbol: CBFA2T2
  hgvsc: ENST00000342704.6:c.1229-41A>G
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000262653
  ensembl transcript: ENST00000346541
  gene symbol: CBFA2T2
  hgvsc: ENST00000346541.3:c.1256-41A>G
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000433270
  ensembl transcript: ENST00000492345
  gene symbol: CBFA2T2
  hgvsc: ENST00000492345.1:c.1169-41A>G
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000364428
  ensembl transcript: ENST00000375279
  gene symbol: CBFA2T2
  hgvsc: ENST00000375279.2:c.1256-41A>G
  variant of: http://identifiers.org/hgnc/1536
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5471
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2391
  bin: 9.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 1370
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2777
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5495
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 630
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7331
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7638
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 689
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 642
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1782
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7746
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 775
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7046
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4040
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3174
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 944
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 354
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 250
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3627
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 116
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3538
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33353
  bin: 9.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 316
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 153
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: Other
reference allele: A
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: BaseQRankSum

20-32224409-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32224409
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 32224409
    reference: chr 20
allele count: 1
allele frequency: 8.268152729317216e-6
allele num: 120946
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl transcript: ENST00000491618
  gene symbol: CBFA2T2
  hgvsc: ENST00000491618.1:n.843-37A>G
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000352622
  ensembl transcript: ENST00000359606
  gene symbol: CBFA2T2
  hgvsc: ENST00000359606.3:c.1286-37A>G
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000262653
  ensembl transcript: ENST00000346541
  gene symbol: CBFA2T2
  hgvsc: ENST00000346541.3:c.1256-37A>G
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000364428
  ensembl transcript: ENST00000375279
  gene symbol: CBFA2T2
  hgvsc: ENST00000375279.2:c.1256-37A>G
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000380902
  ensembl transcript: ENST00000397800
  gene symbol: CBFA2T2
  hgvsc: ENST00000397800.1:c.1169-37A>G
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000345810
  ensembl transcript: ENST00000342704
  gene symbol: CBFA2T2
  hgvsc: ENST00000342704.6:c.1229-37A>G
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000433270
  ensembl transcript: ENST00000492345
  gene symbol: CBFA2T2
  hgvsc: ENST00000492345.1:c.1169-37A>G
  variant of: http://identifiers.org/hgnc/1536
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7748
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7351
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3295
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4040
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7048
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2778
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7641
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5602
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 775
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5471
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 642
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2384
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 944
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1370
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1782
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7752
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 126
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 303
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3648
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 143
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 293
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1912
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: South Asian
population: Other
population: European (Non-Finnish)
population: East Asian
population: Latino
reference allele: A
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQ

20-32224420-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32224420
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 32224420
    reference: chr 20
allele count: 891
allele frequency: 7.363636363636364e-3
allele num: 121000
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000262653
  ensembl transcript: ENST00000346541
  gene symbol: CBFA2T2
  hgvsc: ENST00000346541.3:c.1256-26C>G
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000345810
  ensembl transcript: ENST00000342704
  gene symbol: CBFA2T2
  hgvsc: ENST00000342704.6:c.1229-26C>G
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000364428
  ensembl transcript: ENST00000375279
  gene symbol: CBFA2T2
  hgvsc: ENST00000375279.2:c.1256-26C>G
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000380902
  ensembl transcript: ENST00000397800
  gene symbol: CBFA2T2
  hgvsc: ENST00000397800.1:c.1169-26C>G
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000352622
  ensembl transcript: ENST00000359606
  gene symbol: CBFA2T2
  hgvsc: ENST00000359606.3:c.1286-26C>G
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000433270
  ensembl transcript: ENST00000492345
  gene symbol: CBFA2T2
  hgvsc: ENST00000492345.1:c.1169-26C>G
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl transcript: ENST00000491618
  gene symbol: CBFA2T2
  hgvsc: ENST00000491618.1:n.843-26C>G
  variant of: http://identifiers.org/hgnc/1536
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7389
  bin: 3.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 912
  bin: 7.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 9.25e1
  variant carriers: 27
genotype depth: GenotypeDepth
  all individuals: 1349
  bin: 7.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 5799
  bin: 2.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 7750
  bin: 4.25e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 4036
  bin: 5.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 2768
  bin: 6.25e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 362
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 7639
  bin: 3.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 628
  bin: 8.75e1
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 1.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 743
  bin: 8.25e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 7050
  bin: 4.75e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 5462
  bin: 5.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1764
  bin: 6.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 3562
  bin: 2.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 2583
  bin: 9.75e1
  variant carriers: 642
genotype quality: GenotypeQuality
  all individuals: 3668
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3704
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3529
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 250
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1949
  bin: 8.75e1
  variant carriers: 1
num of homozygotes: 37
population: European (Finnish)
population: Latino
population: East Asian
population: European (Non-Finnish)
population: African
population: Other
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: QD

20-32224423-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32224423
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 32224423
    reference: chr 20
allele count: 3
allele frequency: 2.478806206930742e-5
allele num: 121026
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000433270
  ensembl transcript: ENST00000492345
  gene symbol: CBFA2T2
  hgvsc: ENST00000492345.1:c.1169-23T>A
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000380902
  ensembl transcript: ENST00000397800
  gene symbol: CBFA2T2
  hgvsc: ENST00000397800.1:c.1169-23T>A
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000262653
  ensembl transcript: ENST00000346541
  gene symbol: CBFA2T2
  hgvsc: ENST00000346541.3:c.1256-23T>A
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000352622
  ensembl transcript: ENST00000359606
  gene symbol: CBFA2T2
  hgvsc: ENST00000359606.3:c.1286-23T>A
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000345810
  ensembl transcript: ENST00000342704
  gene symbol: CBFA2T2
  hgvsc: ENST00000342704.6:c.1229-23T>A
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000364428
  ensembl transcript: ENST00000375279
  gene symbol: CBFA2T2
  hgvsc: ENST00000375279.2:c.1256-23T>A
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl transcript: ENST00000491618
  gene symbol: CBFA2T2
  hgvsc: ENST00000491618.1:n.843-23T>A
  variant of: http://identifiers.org/hgnc/1536
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5910
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2037
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3595
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5525
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7833
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4065
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1358
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1780
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7110
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7714
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2797
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 914
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7499
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 514
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 743
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 122
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 244
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1943
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 140
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3740
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: South Asian
population: African
population: East Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
reference allele: T
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum

20-32224428-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32224428
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 32224428
    reference: chr 20
allele count: 1
allele frequency: 8.260366760284156e-6
allele num: 121060
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000433270
  ensembl transcript: ENST00000492345
  gene symbol: CBFA2T2
  hgvsc: ENST00000492345.1:c.1169-18T>C
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000380902
  ensembl transcript: ENST00000397800
  gene symbol: CBFA2T2
  hgvsc: ENST00000397800.1:c.1169-18T>C
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000262653
  ensembl transcript: ENST00000346541
  gene symbol: CBFA2T2
  hgvsc: ENST00000346541.3:c.1256-18T>C
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl transcript: ENST00000491618
  gene symbol: CBFA2T2
  hgvsc: ENST00000491618.1:n.843-18T>C
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000364428
  ensembl transcript: ENST00000375279
  gene symbol: CBFA2T2
  hgvsc: ENST00000375279.2:c.1256-18T>C
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000345810
  ensembl transcript: ENST00000342704
  gene symbol: CBFA2T2
  hgvsc: ENST00000342704.6:c.1229-18T>C
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000352622
  ensembl transcript: ENST00000359606
  gene symbol: CBFA2T2
  hgvsc: ENST00000359606.3:c.1286-18T>C
  variant of: http://identifiers.org/hgnc/1536
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5527
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5950
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7832
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 914
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1780
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7110
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3649
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1358
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7714
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2797
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7507
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 743
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4066
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2034
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 514
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3578
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 216
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3747
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Other
population: South Asian
population: Latino
reference allele: T
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum

20-32224437-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32224437
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 32224437
    reference: chr 20
allele count: 1
allele frequency: 8.257911078813503e-6
allele num: 121096
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000364428
  ensembl transcript: ENST00000375279
  gene symbol: CBFA2T2
  hgvsc: ENST00000375279.2:c.1256-9C>T
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000380902
  ensembl transcript: ENST00000397800
  gene symbol: CBFA2T2
  hgvsc: ENST00000397800.1:c.1169-9C>T
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000262653
  ensembl transcript: ENST00000346541
  gene symbol: CBFA2T2
  hgvsc: ENST00000346541.3:c.1256-9C>T
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000352622
  ensembl transcript: ENST00000359606
  gene symbol: CBFA2T2
  hgvsc: ENST00000359606.3:c.1286-9C>T
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000345810
  ensembl transcript: ENST00000342704
  gene symbol: CBFA2T2
  hgvsc: ENST00000342704.6:c.1229-9C>T
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl transcript: ENST00000491618
  gene symbol: CBFA2T2
  hgvsc: ENST00000491618.1:n.843-9C>T
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000433270
  ensembl transcript: ENST00000492345
  gene symbol: CBFA2T2
  hgvsc: ENST00000492345.1:c.1169-9C>T
  variant of: http://identifiers.org/hgnc/1536
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7111
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7716
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5527
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3671
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5990
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7522
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2797
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2033
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7833
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 514
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 914
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 743
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1780
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4066
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1358
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 206
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3752
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1967
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3739
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33089
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: South Asian
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
reference allele: C
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ

20-32224438-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32224438
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 32224438
    reference: chr 20
allele count: 38
allele frequency: 3.137954384052586e-4
allele num: 121098
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000352622
  ensembl transcript: ENST00000359606
  gene symbol: CBFA2T2
  hgvsc: ENST00000359606.3:c.1286-8T>C
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000433270
  ensembl transcript: ENST00000492345
  gene symbol: CBFA2T2
  hgvsc: ENST00000492345.1:c.1169-8T>C
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000262653
  ensembl transcript: ENST00000346541
  gene symbol: CBFA2T2
  hgvsc: ENST00000346541.3:c.1256-8T>C
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000345810
  ensembl transcript: ENST00000342704
  gene symbol: CBFA2T2
  hgvsc: ENST00000342704.6:c.1229-8T>C
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl transcript: ENST00000491618
  gene symbol: CBFA2T2
  hgvsc: ENST00000491618.1:n.843-8T>C
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000380902
  ensembl transcript: ENST00000397800
  gene symbol: CBFA2T2
  hgvsc: ENST00000397800.1:c.1169-8T>C
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000364428
  ensembl transcript: ENST00000375279
  gene symbol: CBFA2T2
  hgvsc: ENST00000375279.2:c.1256-8T>C
  variant of: http://identifiers.org/hgnc/1536
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2797
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7112
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1358
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 513
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2033
  bin: 9.75e1
  variant carriers: 33
genotype depth: GenotypeDepth
  all individuals: 3657
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7716
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6000
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 744
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1779
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7832
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 914
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4066
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7519
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5527
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33091
  bin: 9.75e1
  variant carriers: 38
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3749
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8548
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 5.25e1
  variant carriers: 0
hgvs: c.1256-8T>C
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: South Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ

20-32224438-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32224438
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 32224438
    reference: chr 20
allele count: 1
allele frequency: 8.257774694875225e-6
allele num: 121098
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl transcript: ENST00000491618
  gene symbol: CBFA2T2
  hgvsc: ENST00000491618.1:n.843-8T>G
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000262653
  ensembl transcript: ENST00000346541
  gene symbol: CBFA2T2
  hgvsc: ENST00000346541.3:c.1256-8T>G
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000433270
  ensembl transcript: ENST00000492345
  gene symbol: CBFA2T2
  hgvsc: ENST00000492345.1:c.1169-8T>G
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000380902
  ensembl transcript: ENST00000397800
  gene symbol: CBFA2T2
  hgvsc: ENST00000397800.1:c.1169-8T>G
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000345810
  ensembl transcript: ENST00000342704
  gene symbol: CBFA2T2
  hgvsc: ENST00000342704.6:c.1229-8T>G
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000352622
  ensembl transcript: ENST00000359606
  gene symbol: CBFA2T2
  hgvsc: ENST00000359606.3:c.1286-8T>G
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000364428
  ensembl transcript: ENST00000375279
  gene symbol: CBFA2T2
  hgvsc: ENST00000375279.2:c.1256-8T>G
  variant of: http://identifiers.org/hgnc/1536
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7716
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2033
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7112
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5527
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3657
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 513
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1779
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 914
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7832
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6000
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2797
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7519
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4066
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1358
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 744
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8548
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1967
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3480
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33091
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 203
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
hgvs: c.1256-8T>G
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
population: European (Finnish)
reference allele: T
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum

20-32224440-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32224440
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 32224440
    reference: chr 20
allele count: 3
allele frequency: 2.477086945751796e-5
allele num: 121110
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl transcript: ENST00000491618
  gene symbol: CBFA2T2
  hgvsc: ENST00000491618.1:n.843-6C>T
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000352622
  ensembl transcript: ENST00000359606
  gene symbol: CBFA2T2
  hgvsc: ENST00000359606.3:c.1286-6C>T
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000262653
  ensembl transcript: ENST00000346541
  gene symbol: CBFA2T2
  hgvsc: ENST00000346541.3:c.1256-6C>T
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000380902
  ensembl transcript: ENST00000397800
  gene symbol: CBFA2T2
  hgvsc: ENST00000397800.1:c.1169-6C>T
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000433270
  ensembl transcript: ENST00000492345
  gene symbol: CBFA2T2
  hgvsc: ENST00000492345.1:c.1169-6C>T
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000364428
  ensembl transcript: ENST00000375279
  gene symbol: CBFA2T2
  hgvsc: ENST00000375279.2:c.1256-6C>T
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000345810
  ensembl transcript: ENST00000342704
  gene symbol: CBFA2T2
  hgvsc: ENST00000342704.6:c.1229-6C>T
  variant of: http://identifiers.org/hgnc/1536
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5531
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6012
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 743
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2799
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2001
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1359
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7838
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7521
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3671
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1781
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7115
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7721
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 915
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 513
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4068
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3584
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 198
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 5.25e1
  variant carriers: 0
hgvs: c.1256-6C>T
num of homozygotes: 0
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: South Asian
population: Other
population: East Asian
reference allele: C
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ

20-32224443-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32224443
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 32224443
    reference: chr 20
allele count: 1
allele frequency: 8.257774694875225e-6
allele num: 121098
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000364428
  ensembl transcript: ENST00000375279
  gene symbol: CBFA2T2
  hgvsc: ENST00000375279.2:c.1256-3C>T
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000352622
  ensembl transcript: ENST00000359606
  gene symbol: CBFA2T2
  hgvsc: ENST00000359606.3:c.1286-3C>T
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000433270
  ensembl transcript: ENST00000492345
  gene symbol: CBFA2T2
  hgvsc: ENST00000492345.1:c.1169-3C>T
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000345810
  ensembl transcript: ENST00000342704
  gene symbol: CBFA2T2
  hgvsc: ENST00000342704.6:c.1229-3C>T
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000262653
  ensembl transcript: ENST00000346541
  gene symbol: CBFA2T2
  hgvsc: ENST00000346541.3:c.1256-3C>T
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000380902
  ensembl transcript: ENST00000397800
  gene symbol: CBFA2T2
  hgvsc: ENST00000397800.1:c.1169-3C>T
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl transcript: ENST00000491618
  gene symbol: CBFA2T2
  hgvsc: ENST00000491618.1:n.843-3C>T
  variant of: http://identifiers.org/hgnc/1536
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1359
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 743
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7838
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 915
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5532
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 513
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1781
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7115
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7724
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7528
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2800
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4068
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6024
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1998
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3653
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 198
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3582
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1969
  bin: 8.75e1
  variant carriers: 0
hgvs: c.1256-3C>T
num of homozygotes: 0
population: South Asian
population: African
population: Other
population: Latino
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: MQRankSum

20-32224451-CAGAG-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32224451
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 32224447
    reference: chr 20
allele count: 1
allele frequency: 8.257365570088519e-6
allele num: 121104
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000352622
  ensembl transcript: ENST00000359606
  gene symbol: CBFA2T2
  hgvsc: ENST00000359606.3:c.1296_1299delAGAG
  hgvsp: ENSP00000352622.3:p.Arg432SerfsTer23
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000262653
  ensembl transcript: ENST00000346541
  gene symbol: CBFA2T2
  hgvsc: ENST00000346541.3:c.1266_1269delAGAG
  hgvsp: ENSP00000262653.7:p.Arg422SerfsTer23
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000364428
  ensembl transcript: ENST00000375279
  gene symbol: CBFA2T2
  hgvsc: ENST00000375279.2:c.1266_1269delAGAG
  hgvsp: ENSP00000364428.2:p.Arg422SerfsTer23
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000345810
  ensembl transcript: ENST00000342704
  gene symbol: CBFA2T2
  hgvsc: ENST00000342704.6:c.1239_1242delAGAG
  hgvsp: ENSP00000345810.5:p.Arg413SerfsTer23
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000433270
  ensembl transcript: ENST00000492345
  gene symbol: CBFA2T2
  hgvsc: ENST00000492345.1:c.1179_1182delAGAG
  hgvsp: ENSP00000433270.1:p.Arg393SerfsTer23
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000380902
  ensembl transcript: ENST00000397800
  gene symbol: CBFA2T2
  hgvsc: ENST00000397800.1:c.1179_1182delAGAG
  hgvsp: ENSP00000380902.1:p.Arg393SerfsTer23
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000078699
  ensembl transcript: ENST00000491618
  gene symbol: CBFA2T2
  hgvsc: ENST00000491618.1:n.853_856delAGAG
  variant of: http://identifiers.org/hgnc/1536
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 513
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 743
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6041
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3673
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1781
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1997
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7115
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7840
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7721
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4068
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 915
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1359
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7530
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5532
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2800
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8635
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3740
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3583
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 194
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Arg422SerfsTer23
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Other
population: South Asian
reference allele: CAGAG
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff

20-32224464-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32224464
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 32224464
    reference: chr 20
allele count: 4
allele frequency: 3.302782594335728e-5
allele num: 121110
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000433270
  ensembl transcript: ENST00000492345
  gene symbol: CBFA2T2
  hgvsc: ENST00000492345.1:c.1187A>G
  hgvsp: ENSP00000433270.1:p.Asn396Ser
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000380902
  ensembl transcript: ENST00000397800
  gene symbol: CBFA2T2
  hgvsc: ENST00000397800.1:c.1187A>G
  hgvsp: ENSP00000380902.1:p.Asn396Ser
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000262653
  ensembl transcript: ENST00000346541
  gene symbol: CBFA2T2
  hgvsc: ENST00000346541.3:c.1274A>G
  hgvsp: ENSP00000262653.7:p.Asn425Ser
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000345810
  ensembl transcript: ENST00000342704
  gene symbol: CBFA2T2
  hgvsc: ENST00000342704.6:c.1247A>G
  hgvsp: ENSP00000345810.5:p.Asn416Ser
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000078699
  ensembl transcript: ENST00000491618
  gene symbol: CBFA2T2
  hgvsc: ENST00000491618.1:n.861A>G
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000364428
  ensembl transcript: ENST00000375279
  gene symbol: CBFA2T2
  hgvsc: ENST00000375279.2:c.1274A>G
  hgvsp: ENSP00000364428.2:p.Asn425Ser
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000352622
  ensembl transcript: ENST00000359606
  gene symbol: CBFA2T2
  hgvsc: ENST00000359606.3:c.1304A>G
  hgvsp: ENSP00000352622.3:p.Asn435Ser
  variant of: http://identifiers.org/hgnc/1536
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1781
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 743
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6050
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3688
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7840
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 513
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7526
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5532
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1996
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 4068
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 915
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7115
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1359
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7720
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2800
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8659
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3581
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1957
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3483
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Asn425Ser
num of homozygotes: 0
population: Latino
population: East Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: African
reference allele: A
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: QD

http://identifiers.org/exac.variant/20-32224480-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32224480
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 32224480
    reference: chr 20
allele count: 1
allele frequency: 8.259002312520648e-6
allele num: 121080
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000352622
  ensembl transcript: ENST00000359606
  gene symbol: CBFA2T2
  hgvsc: ENST00000359606.3:c.1320A>C
  hgvsp: ENST00000359606.3:c.1320A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000380902
  ensembl transcript: ENST00000397800
  gene symbol: CBFA2T2
  hgvsc: ENST00000397800.1:c.1203A>C
  hgvsp: ENST00000397800.1:c.1203A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000364428
  ensembl transcript: ENST00000375279
  gene symbol: CBFA2T2
  hgvsc: ENST00000375279.2:c.1290A>C
  hgvsp: ENST00000375279.2:c.1290A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000262653
  ensembl transcript: ENST00000346541
  gene symbol: CBFA2T2
  hgvsc: ENST00000346541.3:c.1290A>C
  hgvsp: ENST00000346541.3:c.1290A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000345810
  ensembl transcript: ENST00000342704
  gene symbol: CBFA2T2
  hgvsc: ENST00000342704.6:c.1263A>C
  hgvsp: ENST00000342704.6:c.1263A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000433270
  ensembl transcript: ENST00000492345
  gene symbol: CBFA2T2
  hgvsc: ENST00000492345.1:c.1203A>C
  hgvsp: ENST00000492345.1:c.1203A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1536
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3674
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2800
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1781
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7841
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 513
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1992
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7528
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7115
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 915
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1360
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 743
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6053
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5534
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7720
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4068
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33073
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1968
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3578
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Thr430Thr
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: South Asian
population: African
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum

20-32224483-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32224483
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 32224483
    reference: chr 20
allele count: 4
allele frequency: 3.303655494805002e-5
allele num: 121078
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000262653
  ensembl transcript: ENST00000346541
  gene symbol: CBFA2T2
  hgvsc: ENST00000346541.3:c.1293A>G
  hgvsp: ENST00000346541.3:c.1293A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000345810
  ensembl transcript: ENST00000342704
  gene symbol: CBFA2T2
  hgvsc: ENST00000342704.6:c.1266A>G
  hgvsp: ENST00000342704.6:c.1266A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000364428
  ensembl transcript: ENST00000375279
  gene symbol: CBFA2T2
  hgvsc: ENST00000375279.2:c.1293A>G
  hgvsp: ENST00000375279.2:c.1293A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000380902
  ensembl transcript: ENST00000397800
  gene symbol: CBFA2T2
  hgvsc: ENST00000397800.1:c.1206A>G
  hgvsp: ENST00000397800.1:c.1206A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000352622
  ensembl transcript: ENST00000359606
  gene symbol: CBFA2T2
  hgvsc: ENST00000359606.3:c.1323A>G
  hgvsp: ENST00000359606.3:c.1323A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000433270
  ensembl transcript: ENST00000492345
  gene symbol: CBFA2T2
  hgvsc: ENST00000492345.1:c.1206A>G
  hgvsp: ENST00000492345.1:c.1206A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1536
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7840
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3672
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1991
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2800
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7720
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 513
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7115
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1361
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6054
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5534
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 743
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7528
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1781
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4068
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 915
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 221
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33073
  bin: 9.75e1
  variant carriers: 4
hgvs: p.Gly431Gly
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: South Asian
population: European (Finnish)
population: Latino
population: Other
population: East Asian
reference allele: A
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ

20-32224486-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32224486
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 32224486
    reference: chr 20
allele count: 2
allele frequency: 1.65188231990353e-5
allele num: 121074
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000380902
  ensembl transcript: ENST00000397800
  gene symbol: CBFA2T2
  hgvsc: ENST00000397800.1:c.1209C>T
  hgvsp: ENST00000397800.1:c.1209C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000262653
  ensembl transcript: ENST00000346541
  gene symbol: CBFA2T2
  hgvsc: ENST00000346541.3:c.1296C>T
  hgvsp: ENST00000346541.3:c.1296C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000433270
  ensembl transcript: ENST00000492345
  gene symbol: CBFA2T2
  hgvsc: ENST00000492345.1:c.1209C>T
  hgvsp: ENST00000492345.1:c.1209C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000364428
  ensembl transcript: ENST00000375279
  gene symbol: CBFA2T2
  hgvsc: ENST00000375279.2:c.1296C>T
  hgvsp: ENST00000375279.2:c.1296C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000352622
  ensembl transcript: ENST00000359606
  gene symbol: CBFA2T2
  hgvsc: ENST00000359606.3:c.1326C>T
  hgvsp: ENST00000359606.3:c.1326C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000345810
  ensembl transcript: ENST00000342704
  gene symbol: CBFA2T2
  hgvsc: ENST00000342704.6:c.1269C>T
  hgvsp: ENST00000342704.6:c.1269C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1536
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2800
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7532
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1987
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5536
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 915
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7843
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7718
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3659
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1781
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1361
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4070
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7115
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 513
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 743
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6049
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3759
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3741
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1968
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Tyr432Tyr
num of homozygotes: 0
population: African
population: Other
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: BaseQRankSum

20-32224505-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32224505
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 32224505
    reference: chr 20
allele count: 1
allele frequency: 8.264872638312644e-6
allele num: 120994
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000433270
  ensembl transcript: ENST00000492345
  gene symbol: CBFA2T2
  hgvsc: ENST00000492345.1:c.1228A>G
  hgvsp: ENSP00000433270.1:p.Lys410Glu
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000262653
  ensembl transcript: ENST00000346541
  gene symbol: CBFA2T2
  hgvsc: ENST00000346541.3:c.1315A>G
  hgvsp: ENSP00000262653.7:p.Lys439Glu
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000352622
  ensembl transcript: ENST00000359606
  gene symbol: CBFA2T2
  hgvsc: ENST00000359606.3:c.1345A>G
  hgvsp: ENSP00000352622.3:p.Lys449Glu
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000364428
  ensembl transcript: ENST00000375279
  gene symbol: CBFA2T2
  hgvsc: ENST00000375279.2:c.1315A>G
  hgvsp: ENSP00000364428.2:p.Lys439Glu
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000345810
  ensembl transcript: ENST00000342704
  gene symbol: CBFA2T2
  hgvsc: ENST00000342704.6:c.1288A>G
  hgvsp: ENSP00000345810.5:p.Lys430Glu
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000380902
  ensembl transcript: ENST00000397800
  gene symbol: CBFA2T2
  hgvsc: ENST00000397800.1:c.1228A>G
  hgvsp: ENSP00000380902.1:p.Lys410Glu
  variant of: http://identifiers.org/hgnc/1536
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7531
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2800
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5533
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7720
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1781
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1986
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7846
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3587
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6045
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 915
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 743
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1361
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4069
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7115
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 513
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3478
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 269
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3578
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33068
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8599
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Lys439Glu
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: Other
population: East Asian
population: South Asian
reference allele: A
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: MQ

20-32224511-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32224511
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 32224511
    reference: chr 20
allele count: 1
allele frequency: 8.265829062654984e-6
allele num: 120980
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000345810
  ensembl transcript: ENST00000342704
  gene symbol: CBFA2T2
  hgvsc: ENST00000342704.6:c.1294A>G
  hgvsp: ENSP00000345810.5:p.Thr432Ala
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000364428
  ensembl transcript: ENST00000375279
  gene symbol: CBFA2T2
  hgvsc: ENST00000375279.2:c.1321A>G
  hgvsp: ENSP00000364428.2:p.Thr441Ala
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000262653
  ensembl transcript: ENST00000346541
  gene symbol: CBFA2T2
  hgvsc: ENST00000346541.3:c.1321A>G
  hgvsp: ENSP00000262653.7:p.Thr441Ala
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000433270
  ensembl transcript: ENST00000492345
  gene symbol: CBFA2T2
  hgvsc: ENST00000492345.1:c.1234A>G
  hgvsp: ENSP00000433270.1:p.Thr412Ala
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000352622
  ensembl transcript: ENST00000359606
  gene symbol: CBFA2T2
  hgvsc: ENST00000359606.3:c.1351A>G
  hgvsp: ENSP00000352622.3:p.Thr451Ala
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000380902
  ensembl transcript: ENST00000397800
  gene symbol: CBFA2T2
  hgvsc: ENST00000397800.1:c.1234A>G
  hgvsp: ENSP00000380902.1:p.Thr412Ala
  variant of: http://identifiers.org/hgnc/1536
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1781
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7115
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3543
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7530
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 915
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7716
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7844
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2800
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 513
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 743
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5533
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6037
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1985
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1361
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4069
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1968
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1948
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3475
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 298
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8551
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33067
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Thr441Ala
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
reference allele: A
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP

20-32224521-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32224521
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 32224521
    reference: chr 20
allele count: 1
allele frequency: 8.268973158913126e-6
allele num: 120934
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000352622
  ensembl transcript: ENST00000359606
  gene symbol: CBFA2T2
  hgvsc: ENST00000359606.3:c.1354+7G>A
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000364428
  ensembl transcript: ENST00000375279
  gene symbol: CBFA2T2
  hgvsc: ENST00000375279.2:c.1324+7G>A
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000380902
  ensembl transcript: ENST00000397800
  gene symbol: CBFA2T2
  hgvsc: ENST00000397800.1:c.1237+7G>A
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000433270
  ensembl transcript: ENST00000492345
  gene symbol: CBFA2T2
  hgvsc: ENST00000492345.1:c.1237+7G>A
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000345810
  ensembl transcript: ENST00000342704
  gene symbol: CBFA2T2
  hgvsc: ENST00000342704.6:c.1297+7G>A
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000262653
  ensembl transcript: ENST00000346541
  gene symbol: CBFA2T2
  hgvsc: ENST00000346541.3:c.1324+7G>A
  variant of: http://identifiers.org/hgnc/1536
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 743
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5533
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7524
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7115
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 915
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7716
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4069
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1781
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6008
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1361
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1984
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 513
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7842
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3396
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2800
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3576
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3475
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8369
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 124
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 158
  bin: 3.25e1
  variant carriers: 0
hgvs: c.1324+7G>A
num of homozygotes: 0
population: East Asian
population: Other
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum

20-32224530-CT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32224530
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 32224529
    reference: chr 20
allele count: 1
allele frequency: 8.273762245168123e-6
allele num: 120864
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000364428
  ensembl transcript: ENST00000375279
  gene symbol: CBFA2T2
  hgvsc: ENST00000375279.2:c.1324+18delT
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000380902
  ensembl transcript: ENST00000397800
  gene symbol: CBFA2T2
  hgvsc: ENST00000397800.1:c.1237+18delT
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000433270
  ensembl transcript: ENST00000492345
  gene symbol: CBFA2T2
  hgvsc: ENST00000492345.1:c.1237+18delT
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000345810
  ensembl transcript: ENST00000342704
  gene symbol: CBFA2T2
  hgvsc: ENST00000342704.6:c.1297+18delT
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000352622
  ensembl transcript: ENST00000359606
  gene symbol: CBFA2T2
  hgvsc: ENST00000359606.3:c.1354+18delT
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000262653
  ensembl transcript: ENST00000346541
  gene symbol: CBFA2T2
  hgvsc: ENST00000346541.3:c.1324+18delT
  variant of: http://identifiers.org/hgnc/1536
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 742
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1781
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3145
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4069
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7714
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 513
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 623
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7839
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5533
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5980
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2800
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1984
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 915
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7115
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7488
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1361
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3570
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 460
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33066
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1931
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 174
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3469
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: East Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: South Asian
reference allele: CT
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum

20-32224533-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32224533
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 32224533
    reference: chr 20
allele count: 15
allele frequency: 1.241167027984179e-4
allele num: 120854
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000345810
  ensembl transcript: ENST00000342704
  gene symbol: CBFA2T2
  hgvsc: ENST00000342704.6:c.1297+19G>A
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000352622
  ensembl transcript: ENST00000359606
  gene symbol: CBFA2T2
  hgvsc: ENST00000359606.3:c.1354+19G>A
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000364428
  ensembl transcript: ENST00000375279
  gene symbol: CBFA2T2
  hgvsc: ENST00000375279.2:c.1324+19G>A
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000433270
  ensembl transcript: ENST00000492345
  gene symbol: CBFA2T2
  hgvsc: ENST00000492345.1:c.1237+19G>A
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000380902
  ensembl transcript: ENST00000397800
  gene symbol: CBFA2T2
  hgvsc: ENST00000397800.1:c.1237+19G>A
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000262653
  ensembl transcript: ENST00000346541
  gene symbol: CBFA2T2
  hgvsc: ENST00000346541.3:c.1324+19G>A
  variant of: http://identifiers.org/hgnc/1536
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7711
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7836
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7114
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1982
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 915
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3092
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5938
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2799
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 742
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7482
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5534
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1782
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1361
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 8.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 4069
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 9.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 200
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 479
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1966
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7947
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3466
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1931
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 252
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: FS
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum

20-32224535-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32224535
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 32224535
    reference: chr 20
allele count: 1
allele frequency: 8.274583788435442e-6
allele num: 120852
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000364428
  ensembl transcript: ENST00000375279
  gene symbol: CBFA2T2
  hgvsc: ENST00000375279.2:c.1324+21A>T
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000352622
  ensembl transcript: ENST00000359606
  gene symbol: CBFA2T2
  hgvsc: ENST00000359606.3:c.1354+21A>T
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000262653
  ensembl transcript: ENST00000346541
  gene symbol: CBFA2T2
  hgvsc: ENST00000346541.3:c.1324+21A>T
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000433270
  ensembl transcript: ENST00000492345
  gene symbol: CBFA2T2
  hgvsc: ENST00000492345.1:c.1237+21A>T
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000345810
  ensembl transcript: ENST00000342704
  gene symbol: CBFA2T2
  hgvsc: ENST00000342704.6:c.1297+21A>T
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000380902
  ensembl transcript: ENST00000397800
  gene symbol: CBFA2T2
  hgvsc: ENST00000397800.1:c.1237+21A>T
  variant of: http://identifiers.org/hgnc/1536
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4071
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 667
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 513
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3042
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2799
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5917
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1980
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5533
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1781
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7706
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7115
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7463
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7837
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1360
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 916
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 742
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3569
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33061
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 206
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 272
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3668
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7869
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 509
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: South Asian
population: East Asian
population: African
population: Latino
reference allele: A
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum

20-32224538-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32224538
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 32224538
    reference: chr 20
allele count: 2
allele frequency: 1.655327672112695e-5
allele num: 120822
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000364428
  ensembl transcript: ENST00000375279
  gene symbol: CBFA2T2
  hgvsc: ENST00000375279.2:c.1324+24T>A
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000262653
  ensembl transcript: ENST00000346541
  gene symbol: CBFA2T2
  hgvsc: ENST00000346541.3:c.1324+24T>A
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000345810
  ensembl transcript: ENST00000342704
  gene symbol: CBFA2T2
  hgvsc: ENST00000342704.6:c.1297+24T>A
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000433270
  ensembl transcript: ENST00000492345
  gene symbol: CBFA2T2
  hgvsc: ENST00000492345.1:c.1237+24T>A
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000380902
  ensembl transcript: ENST00000397800
  gene symbol: CBFA2T2
  hgvsc: ENST00000397800.1:c.1237+24T>A
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000352622
  ensembl transcript: ENST00000359606
  gene symbol: CBFA2T2
  hgvsc: ENST00000359606.3:c.1354+24T>A
  variant of: http://identifiers.org/hgnc/1536
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5778
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 742
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5536
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2893
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7693
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1360
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7439
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2798
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 771
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7833
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1781
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7115
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1980
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 915
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 513
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4070
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7427
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33058
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 289
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 270
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1964
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 122
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 143
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 545
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: African
population: Latino
population: Other
population: European (Finnish)
reference allele: T
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: FS

20-32224541-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32224541
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 32224541
    reference: chr 20
allele count: 6
allele frequency: 4.966311851275515e-5
allele num: 120814
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000433270
  ensembl transcript: ENST00000492345
  gene symbol: CBFA2T2
  hgvsc: ENST00000492345.1:c.1237+27T>C
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000352622
  ensembl transcript: ENST00000359606
  gene symbol: CBFA2T2
  hgvsc: ENST00000359606.3:c.1354+27T>C
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000345810
  ensembl transcript: ENST00000342704
  gene symbol: CBFA2T2
  hgvsc: ENST00000342704.6:c.1297+27T>C
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000262653
  ensembl transcript: ENST00000346541
  gene symbol: CBFA2T2
  hgvsc: ENST00000346541.3:c.1324+27T>C
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000364428
  ensembl transcript: ENST00000375279
  gene symbol: CBFA2T2
  hgvsc: ENST00000375279.2:c.1324+27T>C
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000380902
  ensembl transcript: ENST00000397800
  gene symbol: CBFA2T2
  hgvsc: ENST00000397800.1:c.1237+27T>C
  variant of: http://identifiers.org/hgnc/1536
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7833
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2797
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5797
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 513
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 742
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1980
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2912
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4071
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 771
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1361
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7115
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1780
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7689
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5533
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7410
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 915
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1911
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 276
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3741
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 553
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 348
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3559
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1965
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 287
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
reference allele: T
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: DP

20-32224551-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32224551
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 32224551
    reference: chr 20
allele count: 1
allele frequency: 8.285827919925758e-6
allele num: 120688
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000262653
  ensembl transcript: ENST00000346541
  gene symbol: CBFA2T2
  hgvsc: ENST00000346541.3:c.1324+37C>G
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000345810
  ensembl transcript: ENST00000342704
  gene symbol: CBFA2T2
  hgvsc: ENST00000342704.6:c.1297+37C>G
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000433270
  ensembl transcript: ENST00000492345
  gene symbol: CBFA2T2
  hgvsc: ENST00000492345.1:c.1237+37C>G
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000380902
  ensembl transcript: ENST00000397800
  gene symbol: CBFA2T2
  hgvsc: ENST00000397800.1:c.1237+37C>G
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000364428
  ensembl transcript: ENST00000375279
  gene symbol: CBFA2T2
  hgvsc: ENST00000375279.2:c.1324+37C>G
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000352622
  ensembl transcript: ENST00000359606
  gene symbol: CBFA2T2
  hgvsc: ENST00000359606.3:c.1354+37C>G
  variant of: http://identifiers.org/hgnc/1536
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1361
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4070
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5532
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5555
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7663
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1979
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1258
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2794
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7824
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 512
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 913
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7106
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1781
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2514
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7258
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 742
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 914
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 301
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1957
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 349
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 540
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 607
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 238
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6752
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 95
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3720
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 168
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: South Asian
population: African
population: East Asian
population: Other
population: European (Finnish)
reference allele: C
site quality: DP
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum

20-32228110-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32228110
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 32228110
    reference: chr 20
allele count: 1
allele frequency: 1.137009664582149e-5
allele num: 87950
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000380902
  ensembl transcript: ENST00000397800
  gene symbol: CBFA2T2
  hgvsc: ENST00000397800.1:c.1238-37T>A
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000262653
  ensembl transcript: ENST00000346541
  gene symbol: CBFA2T2
  hgvsc: ENST00000346541.3:c.1325-37T>A
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000443398
  ensembl transcript: ENST00000543126
  gene symbol: CBFA2T2
  hgvsc: ENST00000543126.1:c.-29-40T>A
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000345810
  ensembl transcript: ENST00000342704
  gene symbol: CBFA2T2
  hgvsc: ENST00000342704.6:c.1298-37T>A
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000433270
  ensembl transcript: ENST00000492345
  gene symbol: CBFA2T2
  hgvsc: ENST00000492345.1:c.1238-37T>A
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000364428
  ensembl transcript: ENST00000375279
  gene symbol: CBFA2T2
  hgvsc: ENST00000375279.2:c.1325-37T>A
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000352622
  ensembl transcript: ENST00000359606
  gene symbol: CBFA2T2
  hgvsc: ENST00000359606.3:c.1355-37T>A
  variant of: http://identifiers.org/hgnc/1536
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6844
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1226
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10901
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15304
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1243
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2998
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20940
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 989
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 722
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14600
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 780
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 519
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5626
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2398
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 152
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Latino
population: African
population: South Asian
reference allele: T
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ

20-32228114-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32228114
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 32228114
    reference: chr 20
allele count: 3
allele frequency: 3.413202266366305e-5
allele num: 87894
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000262653
  ensembl transcript: ENST00000346541
  gene symbol: CBFA2T2
  hgvsc: ENST00000346541.3:c.1325-33C>T
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000443398
  ensembl transcript: ENST00000543126
  gene symbol: CBFA2T2
  hgvsc: ENST00000543126.1:c.-29-36C>T
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000364428
  ensembl transcript: ENST00000375279
  gene symbol: CBFA2T2
  hgvsc: ENST00000375279.2:c.1325-33C>T
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000380902
  ensembl transcript: ENST00000397800
  gene symbol: CBFA2T2
  hgvsc: ENST00000397800.1:c.1238-33C>T
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000352622
  ensembl transcript: ENST00000359606
  gene symbol: CBFA2T2
  hgvsc: ENST00000359606.3:c.1355-33C>T
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000433270
  ensembl transcript: ENST00000492345
  gene symbol: CBFA2T2
  hgvsc: ENST00000492345.1:c.1238-33C>T
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000345810
  ensembl transcript: ENST00000342704
  gene symbol: CBFA2T2
  hgvsc: ENST00000342704.6:c.1298-33C>T
  variant of: http://identifiers.org/hgnc/1536
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13519
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 951
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1284
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15065
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3330
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19666
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5636
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 6307
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 308
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1969
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 760
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 1822
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5436
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 155
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 529
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 310
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8651
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: African
population: Other
reference allele: C
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum

20-32228115-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32228115
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 32228115
    reference: chr 20
allele count: 912
allele frequency: 1.024166741532657e-2
allele num: 89048
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000345810
  ensembl transcript: ENST00000342704
  gene symbol: CBFA2T2
  hgvsc: ENST00000342704.6:c.1298-32G>A
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000364428
  ensembl transcript: ENST00000375279
  gene symbol: CBFA2T2
  hgvsc: ENST00000375279.2:c.1325-32G>A
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000433270
  ensembl transcript: ENST00000492345
  gene symbol: CBFA2T2
  hgvsc: ENST00000492345.1:c.1238-32G>A
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000443398
  ensembl transcript: ENST00000543126
  gene symbol: CBFA2T2
  hgvsc: ENST00000543126.1:c.-29-35G>A
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000262653
  ensembl transcript: ENST00000346541
  gene symbol: CBFA2T2
  hgvsc: ENST00000346541.3:c.1325-32G>A
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000380902
  ensembl transcript: ENST00000397800
  gene symbol: CBFA2T2
  hgvsc: ENST00000397800.1:c.1238-32G>A
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000352622
  ensembl transcript: ENST00000359606
  gene symbol: CBFA2T2
  hgvsc: ENST00000359606.3:c.1355-32G>A
  variant of: http://identifiers.org/hgnc/1536
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15214
  bin: 2.25e1
  variant carriers: 190
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 3.75e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 3604
  bin: 2.75e1
  variant carriers: 107
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.75e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 5.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 805
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 4.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 14755
  bin: 7.5e0
  variant carriers: 48
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 18551
  bin: 1.25e1
  variant carriers: 200
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 4.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 6.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 1363
  bin: 3.25e1
  variant carriers: 50
genotype depth: GenotypeDepth
  all individuals: 5131
  bin: 1.75e1
  variant carriers: 264
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 8.75e1
  variant carriers: 11
genotype quality: GenotypeQuality
  all individuals: 594
  bin: 1.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 535
  bin: 5.25e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 164
  bin: 9.25e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 811
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14632
  bin: 2.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 1527
  bin: 4.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 2028
  bin: 6.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 268
  bin: 2.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5167
  bin: 2.75e1
  variant carriers: 2
num of homozygotes: 9
population: South Asian
population: Latino
population: African
population: European (Non-Finnish)
population: East Asian
population: Other
population: European (Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: VQSLOD

20-32228119-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32228119
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 32228119
    reference: chr 20
allele count: 5
allele frequency: 5.44010445000544e-5
allele num: 91910
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000443398
  ensembl transcript: ENST00000543126
  gene symbol: CBFA2T2
  hgvsc: ENST00000543126.1:c.-29-31A>G
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000380902
  ensembl transcript: ENST00000397800
  gene symbol: CBFA2T2
  hgvsc: ENST00000397800.1:c.1238-28A>G
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000352622
  ensembl transcript: ENST00000359606
  gene symbol: CBFA2T2
  hgvsc: ENST00000359606.3:c.1355-28A>G
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000262653
  ensembl transcript: ENST00000346541
  gene symbol: CBFA2T2
  hgvsc: ENST00000346541.3:c.1325-28A>G
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000345810
  ensembl transcript: ENST00000342704
  gene symbol: CBFA2T2
  hgvsc: ENST00000342704.6:c.1298-28A>G
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000433270
  ensembl transcript: ENST00000492345
  gene symbol: CBFA2T2
  hgvsc: ENST00000492345.1:c.1238-28A>G
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000364428
  ensembl transcript: ENST00000375279
  gene symbol: CBFA2T2
  hgvsc: ENST00000375279.2:c.1325-28A>G
  variant of: http://identifiers.org/hgnc/1536
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14590
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 14002
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21230
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 510
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1457
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3398
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4288
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21693
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3946
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1079
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 362
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 497
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 679
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6637
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 720
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 303
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Latino
population: African
population: European (Finnish)
population: Other
reference allele: A
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: VQSLOD

20-32228120-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32228120
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 32228120
    reference: chr 20
allele count: 43
allele frequency: 4.654082604554507e-4
allele num: 92392
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000352622
  ensembl transcript: ENST00000359606
  gene symbol: CBFA2T2
  hgvsc: ENST00000359606.3:c.1355-27G>T
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000443398
  ensembl transcript: ENST00000543126
  gene symbol: CBFA2T2
  hgvsc: ENST00000543126.1:c.-29-30G>T
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000364428
  ensembl transcript: ENST00000375279
  gene symbol: CBFA2T2
  hgvsc: ENST00000375279.2:c.1325-27G>T
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000345810
  ensembl transcript: ENST00000342704
  gene symbol: CBFA2T2
  hgvsc: ENST00000342704.6:c.1298-27G>T
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000262653
  ensembl transcript: ENST00000346541
  gene symbol: CBFA2T2
  hgvsc: ENST00000346541.3:c.1325-27G>T
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000380902
  ensembl transcript: ENST00000397800
  gene symbol: CBFA2T2
  hgvsc: ENST00000397800.1:c.1238-27G>T
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000433270
  ensembl transcript: ENST00000492345
  gene symbol: CBFA2T2
  hgvsc: ENST00000492345.1:c.1238-27G>T
  variant of: http://identifiers.org/hgnc/1536
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22377
  bin: 2.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 3163
  bin: 1.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1479
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13796
  bin: 1.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 466
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13775
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4415
  bin: 2.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 4.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 6298
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 470
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 170
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 95
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 237
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3651
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4318
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13967
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 594
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2569
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: African
population: South Asian
population: Latino
population: Other
population: European (Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: QD
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/20-32228129-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32228129
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 32228129
    reference: chr 20
allele count: 1
allele frequency: 1.016342792096918e-5
allele num: 98392
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000345810
  ensembl transcript: ENST00000342704
  gene symbol: CBFA2T2
  hgvsc: ENST00000342704.6:c.1298-18A>C
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000433270
  ensembl transcript: ENST00000492345
  gene symbol: CBFA2T2
  hgvsc: ENST00000492345.1:c.1238-18A>C
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000443398
  ensembl transcript: ENST00000543126
  gene symbol: CBFA2T2
  hgvsc: ENST00000543126.1:c.-29-21A>C
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000380902
  ensembl transcript: ENST00000397800
  gene symbol: CBFA2T2
  hgvsc: ENST00000397800.1:c.1238-18A>C
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000364428
  ensembl transcript: ENST00000375279
  gene symbol: CBFA2T2
  hgvsc: ENST00000375279.2:c.1325-18A>C
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000262653
  ensembl transcript: ENST00000346541
  gene symbol: CBFA2T2
  hgvsc: ENST00000346541.3:c.1325-18A>C
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000352622
  ensembl transcript: ENST00000359606
  gene symbol: CBFA2T2
  hgvsc: ENST00000359606.3:c.1355-18A>C
  variant of: http://identifiers.org/hgnc/1536
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8007
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31386
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 514
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5450
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11171
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1633
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1637
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 574
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3065
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 332
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2871
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11446
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 667
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 198
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 140
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 720
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: African
population: East Asian
population: South Asian
reference allele: A
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum

20-32228131-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32228131
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 32228131
    reference: chr 20
allele count: 1
allele frequency: 1.000500250125063e-5
allele num: 99950
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000352622
  ensembl transcript: ENST00000359606
  gene symbol: CBFA2T2
  hgvsc: ENST00000359606.3:c.1355-16T>C
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000380902
  ensembl transcript: ENST00000397800
  gene symbol: CBFA2T2
  hgvsc: ENST00000397800.1:c.1238-16T>C
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000262653
  ensembl transcript: ENST00000346541
  gene symbol: CBFA2T2
  hgvsc: ENST00000346541.3:c.1325-16T>C
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000443398
  ensembl transcript: ENST00000543126
  gene symbol: CBFA2T2
  hgvsc: ENST00000543126.1:c.-29-19T>C
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000364428
  ensembl transcript: ENST00000375279
  gene symbol: CBFA2T2
  hgvsc: ENST00000375279.2:c.1325-16T>C
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000433270
  ensembl transcript: ENST00000492345
  gene symbol: CBFA2T2
  hgvsc: ENST00000492345.1:c.1238-16T>C
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000345810
  ensembl transcript: ENST00000342704
  gene symbol: CBFA2T2
  hgvsc: ENST00000342704.6:c.1298-16T>C
  variant of: http://identifiers.org/hgnc/1536
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 32740
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1717
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5750
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1502
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 510
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7124
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10488
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2568
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 418
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3213
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 740
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 506
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 514
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 144
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 725
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3226
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
population: Latino
population: South Asian
reference allele: T
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: MQ

20-32228135-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32228135
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 32228135
    reference: chr 20
allele count: 4
allele frequency: 3.894232641458e-5
allele num: 102716
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000364428
  ensembl transcript: ENST00000375279
  gene symbol: CBFA2T2
  hgvsc: ENST00000375279.2:c.1325-12A>G
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000262653
  ensembl transcript: ENST00000346541
  gene symbol: CBFA2T2
  hgvsc: ENST00000346541.3:c.1325-12A>G
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000433270
  ensembl transcript: ENST00000492345
  gene symbol: CBFA2T2
  hgvsc: ENST00000492345.1:c.1238-12A>G
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000443398
  ensembl transcript: ENST00000543126
  gene symbol: CBFA2T2
  hgvsc: ENST00000543126.1:c.-29-15A>G
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000345810
  ensembl transcript: ENST00000342704
  gene symbol: CBFA2T2
  hgvsc: ENST00000342704.6:c.1298-12A>G
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000380902
  ensembl transcript: ENST00000397800
  gene symbol: CBFA2T2
  hgvsc: ENST00000397800.1:c.1238-12A>G
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000352622
  ensembl transcript: ENST00000359606
  gene symbol: CBFA2T2
  hgvsc: ENST00000359606.3:c.1355-12A>G
  variant of: http://identifiers.org/hgnc/1536
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9144
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5767
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34787
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1835
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1371
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6453
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 828
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9447
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 509
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2576
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2127
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 725
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 157
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 472
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: Other
population: South Asian
population: African
population: European (Non-Finnish)
reference allele: A
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: FS

20-32228188-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32228188
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 32228188
    reference: chr 20
allele count: 1
allele frequency: 8.337085021593051e-6
allele num: 119946
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000345810
  ensembl transcript: ENST00000342704
  gene symbol: CBFA2T2
  hgvsc: ENST00000342704.6:c.1339G>A
  hgvsp: ENSP00000345810.5:p.Val447Ile
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000262653
  ensembl transcript: ENST00000346541
  gene symbol: CBFA2T2
  hgvsc: ENST00000346541.3:c.1366G>A
  hgvsp: ENSP00000262653.7:p.Val456Ile
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000352622
  ensembl transcript: ENST00000359606
  gene symbol: CBFA2T2
  hgvsc: ENST00000359606.3:c.1396G>A
  hgvsp: ENSP00000352622.3:p.Val466Ile
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000433270
  ensembl transcript: ENST00000492345
  gene symbol: CBFA2T2
  hgvsc: ENST00000492345.1:c.1279G>A
  hgvsp: ENSP00000433270.1:p.Val427Ile
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000443398
  ensembl transcript: ENST00000543126
  gene symbol: CBFA2T2
  hgvsc: ENST00000543126.1:c.10G>A
  hgvsp: ENSP00000443398.1:p.Val4Ile
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000380902
  ensembl transcript: ENST00000397800
  gene symbol: CBFA2T2
  hgvsc: ENST00000397800.1:c.1279G>A
  hgvsp: ENSP00000380902.1:p.Val427Ile
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000364428
  ensembl transcript: ENST00000375279
  gene symbol: CBFA2T2
  hgvsc: ENST00000375279.2:c.1366G>A
  hgvsp: ENSP00000364428.2:p.Val456Ile
  variant of: http://identifiers.org/hgnc/1536
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3126
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42847
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 723
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11983
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 596
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5068
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 143
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 735
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 281
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49594
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Val456Ile
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: African
population: South Asian
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: DP

20-32228199-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32228199
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 32228199
    reference: chr 20
allele count: 39
allele frequency: 3.237535488369776e-4
allele num: 120462
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000364428
  ensembl transcript: ENST00000375279
  gene symbol: CBFA2T2
  hgvsc: ENST00000375279.2:c.1377C>G
  hgvsp: ENST00000375279.2:c.1377C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000443398
  ensembl transcript: ENST00000543126
  gene symbol: CBFA2T2
  hgvsc: ENST00000543126.1:c.21C>G
  hgvsp: ENST00000543126.1:c.21C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000352622
  ensembl transcript: ENST00000359606
  gene symbol: CBFA2T2
  hgvsc: ENST00000359606.3:c.1407C>G
  hgvsp: ENST00000359606.3:c.1407C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000433270
  ensembl transcript: ENST00000492345
  gene symbol: CBFA2T2
  hgvsc: ENST00000492345.1:c.1290C>G
  hgvsp: ENST00000492345.1:c.1290C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000380902
  ensembl transcript: ENST00000397800
  gene symbol: CBFA2T2
  hgvsc: ENST00000397800.1:c.1290C>G
  hgvsp: ENST00000397800.1:c.1290C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000345810
  ensembl transcript: ENST00000342704
  gene symbol: CBFA2T2
  hgvsc: ENST00000342704.6:c.1350C>G
  hgvsp: ENST00000342704.6:c.1350C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000262653
  ensembl transcript: ENST00000346541
  gene symbol: CBFA2T2
  hgvsc: ENST00000346541.3:c.1377C>G
  hgvsp: ENST00000346541.3:c.1377C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1536
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 603
  bin: 3.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12447
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 42671
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3240
  bin: 3.25e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 250
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 532
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 177
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49939
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Ala459Ala
num of homozygotes: 0
population: East Asian
population: African
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: Latino
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: QD

20-32228199-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32228199
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 32228199
    reference: chr 20
allele count: 2
allele frequency: 1.660274609420398e-5
allele num: 120462
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000364428
  ensembl transcript: ENST00000375279
  gene symbol: CBFA2T2
  hgvsc: ENST00000375279.2:c.1377C>T
  hgvsp: ENST00000375279.2:c.1377C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000443398
  ensembl transcript: ENST00000543126
  gene symbol: CBFA2T2
  hgvsc: ENST00000543126.1:c.21C>T
  hgvsp: ENST00000543126.1:c.21C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000262653
  ensembl transcript: ENST00000346541
  gene symbol: CBFA2T2
  hgvsc: ENST00000346541.3:c.1377C>T
  hgvsp: ENST00000346541.3:c.1377C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000345810
  ensembl transcript: ENST00000342704
  gene symbol: CBFA2T2
  hgvsc: ENST00000342704.6:c.1350C>T
  hgvsp: ENST00000342704.6:c.1350C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000380902
  ensembl transcript: ENST00000397800
  gene symbol: CBFA2T2
  hgvsc: ENST00000397800.1:c.1290C>T
  hgvsp: ENST00000397800.1:c.1290C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000433270
  ensembl transcript: ENST00000492345
  gene symbol: CBFA2T2
  hgvsc: ENST00000492345.1:c.1290C>T
  hgvsp: ENST00000492345.1:c.1290C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000352622
  ensembl transcript: ENST00000359606
  gene symbol: CBFA2T2
  hgvsc: ENST00000359606.3:c.1407C>T
  hgvsp: ENST00000359606.3:c.1407C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1536
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42671
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 603
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3240
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12447
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 537
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 207
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 250
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 131
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 769
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Ala459Ala
num of homozygotes: 0
population: African
population: Other
population: East Asian
population: Latino
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: VQSLOD

20-32228200-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32228200
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 32228200
    reference: chr 20
allele count: 1
allele frequency: 8.294349888855711e-6
allele num: 120564
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000345810
  ensembl transcript: ENST00000342704
  gene symbol: CBFA2T2
  hgvsc: ENST00000342704.6:c.1351G>A
  hgvsp: ENSP00000345810.5:p.Val451Ile
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000443398
  ensembl transcript: ENST00000543126
  gene symbol: CBFA2T2
  hgvsc: ENST00000543126.1:c.22G>A
  hgvsp: ENSP00000443398.1:p.Val8Ile
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000433270
  ensembl transcript: ENST00000492345
  gene symbol: CBFA2T2
  hgvsc: ENST00000492345.1:c.1291G>A
  hgvsp: ENSP00000433270.1:p.Val431Ile
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000352622
  ensembl transcript: ENST00000359606
  gene symbol: CBFA2T2
  hgvsc: ENST00000359606.3:c.1408G>A
  hgvsp: ENSP00000352622.3:p.Val470Ile
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000262653
  ensembl transcript: ENST00000346541
  gene symbol: CBFA2T2
  hgvsc: ENST00000346541.3:c.1378G>A
  hgvsp: ENSP00000262653.7:p.Val460Ile
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000364428
  ensembl transcript: ENST00000375279
  gene symbol: CBFA2T2
  hgvsc: ENST00000375279.2:c.1378G>A
  hgvsp: ENSP00000364428.2:p.Val460Ile
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000380902
  ensembl transcript: ENST00000397800
  gene symbol: CBFA2T2
  hgvsc: ENST00000397800.1:c.1291G>A
  hgvsp: ENSP00000380902.1:p.Val431Ile
  variant of: http://identifiers.org/hgnc/1536
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42677
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3264
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12536
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 195
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 486
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1147
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 169
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 144
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1202
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Val460Ile
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: African
population: Other
reference allele: G
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP

20-32228200-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32228200
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 32228200
    reference: chr 20
allele count: 1
allele frequency: 8.294349888855711e-6
allele num: 120564
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000380902
  ensembl transcript: ENST00000397800
  gene symbol: CBFA2T2
  hgvsc: ENST00000397800.1:c.1291G>T
  hgvsp: ENSP00000380902.1:p.Val431Phe
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000262653
  ensembl transcript: ENST00000346541
  gene symbol: CBFA2T2
  hgvsc: ENST00000346541.3:c.1378G>T
  hgvsp: ENSP00000262653.7:p.Val460Phe
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000443398
  ensembl transcript: ENST00000543126
  gene symbol: CBFA2T2
  hgvsc: ENST00000543126.1:c.22G>T
  hgvsp: ENSP00000443398.1:p.Val8Phe
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000433270
  ensembl transcript: ENST00000492345
  gene symbol: CBFA2T2
  hgvsc: ENST00000492345.1:c.1291G>T
  hgvsp: ENSP00000433270.1:p.Val431Phe
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000352622
  ensembl transcript: ENST00000359606
  gene symbol: CBFA2T2
  hgvsc: ENST00000359606.3:c.1408G>T
  hgvsp: ENSP00000352622.3:p.Val470Phe
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000364428
  ensembl transcript: ENST00000375279
  gene symbol: CBFA2T2
  hgvsc: ENST00000375279.2:c.1378G>T
  hgvsp: ENSP00000364428.2:p.Val460Phe
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000345810
  ensembl transcript: ENST00000342704
  gene symbol: CBFA2T2
  hgvsc: ENST00000342704.6:c.1351G>T
  hgvsp: ENSP00000345810.5:p.Val451Phe
  variant of: http://identifiers.org/hgnc/1536
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42677
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3264
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12536
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 737
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 50140
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 486
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 144
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1147
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Val460Phe
num of homozygotes: 0
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: South Asian
population: East Asian
population: Other
reference allele: G
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: MQ

20-32228202-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32228202
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 32228202
    reference: chr 20
allele count: 3
allele frequency: 2.486242789895909e-5
allele num: 120664
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000380902
  ensembl transcript: ENST00000397800
  gene symbol: CBFA2T2
  hgvsc: ENST00000397800.1:c.1293C>T
  hgvsp: ENST00000397800.1:c.1293C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000364428
  ensembl transcript: ENST00000375279
  gene symbol: CBFA2T2
  hgvsc: ENST00000375279.2:c.1380C>T
  hgvsp: ENST00000375279.2:c.1380C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000262653
  ensembl transcript: ENST00000346541
  gene symbol: CBFA2T2
  hgvsc: ENST00000346541.3:c.1380C>T
  hgvsp: ENST00000346541.3:c.1380C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000433270
  ensembl transcript: ENST00000492345
  gene symbol: CBFA2T2
  hgvsc: ENST00000492345.1:c.1293C>T
  hgvsp: ENST00000492345.1:c.1293C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000345810
  ensembl transcript: ENST00000342704
  gene symbol: CBFA2T2
  hgvsc: ENST00000342704.6:c.1353C>T
  hgvsp: ENST00000342704.6:c.1353C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000443398
  ensembl transcript: ENST00000543126
  gene symbol: CBFA2T2
  hgvsc: ENST00000543126.1:c.24C>T
  hgvsp: ENST00000543126.1:c.24C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000352622
  ensembl transcript: ENST00000359606
  gene symbol: CBFA2T2
  hgvsc: ENST00000359606.3:c.1410C>T
  hgvsp: ENST00000359606.3:c.1410C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1536
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 42662
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 603
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3254
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12632
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 534
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1138
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50216
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 133
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Val460Val
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Other
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum

20-32228203-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32228203
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 32228203
    reference: chr 20
allele count: 1
allele frequency: 8.28239659427852e-6
allele num: 120738
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000345810
  ensembl transcript: ENST00000342704
  gene symbol: CBFA2T2
  hgvsc: ENST00000342704.6:c.1354G>A
  hgvsp: ENSP00000345810.5:p.Ala452Thr
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000352622
  ensembl transcript: ENST00000359606
  gene symbol: CBFA2T2
  hgvsc: ENST00000359606.3:c.1411G>A
  hgvsp: ENSP00000352622.3:p.Ala471Thr
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000364428
  ensembl transcript: ENST00000375279
  gene symbol: CBFA2T2
  hgvsc: ENST00000375279.2:c.1381G>A
  hgvsp: ENSP00000364428.2:p.Ala461Thr
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000380902
  ensembl transcript: ENST00000397800
  gene symbol: CBFA2T2
  hgvsc: ENST00000397800.1:c.1294G>A
  hgvsp: ENSP00000380902.1:p.Ala432Thr
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000443398
  ensembl transcript: ENST00000543126
  gene symbol: CBFA2T2
  hgvsc: ENST00000543126.1:c.25G>A
  hgvsp: ENSP00000443398.1:p.Ala9Thr
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000262653
  ensembl transcript: ENST00000346541
  gene symbol: CBFA2T2
  hgvsc: ENST00000346541.3:c.1381G>A
  hgvsp: ENSP00000262653.7:p.Ala461Thr
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000433270
  ensembl transcript: ENST00000492345
  gene symbol: CBFA2T2
  hgvsc: ENST00000492345.1:c.1294G>A
  hgvsp: ENSP00000433270.1:p.Ala432Thr
  variant of: http://identifiers.org/hgnc/1536
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3269
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 606
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12678
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42662
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1208
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50364
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5219
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Ala461Thr
num of homozygotes: 0
population: Latino
population: African
population: European (Non-Finnish)
population: East Asian
population: Other
population: European (Finnish)
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: MQRankSum

20-32228223-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32228223
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 32228223
    reference: chr 20
allele count: 3
allele frequency: 2.475410918212423e-5
allele num: 121192
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000380902
  ensembl transcript: ENST00000397800
  gene symbol: CBFA2T2
  hgvsc: ENST00000397800.1:c.1314C>T
  hgvsp: ENST00000397800.1:c.1314C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000345810
  ensembl transcript: ENST00000342704
  gene symbol: CBFA2T2
  hgvsc: ENST00000342704.6:c.1374C>T
  hgvsp: ENST00000342704.6:c.1374C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000443398
  ensembl transcript: ENST00000543126
  gene symbol: CBFA2T2
  hgvsc: ENST00000543126.1:c.45C>T
  hgvsp: ENST00000543126.1:c.45C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000433270
  ensembl transcript: ENST00000492345
  gene symbol: CBFA2T2
  hgvsc: ENST00000492345.1:c.1314C>T
  hgvsp: ENST00000492345.1:c.1314C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000262653
  ensembl transcript: ENST00000346541
  gene symbol: CBFA2T2
  hgvsc: ENST00000346541.3:c.1401C>T
  hgvsp: ENST00000346541.3:c.1401C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000364428
  ensembl transcript: ENST00000375279
  gene symbol: CBFA2T2
  hgvsc: ENST00000375279.2:c.1401C>T
  hgvsp: ENST00000375279.2:c.1401C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000352622
  ensembl transcript: ENST00000359606
  gene symbol: CBFA2T2
  hgvsc: ENST00000359606.3:c.1431C>T
  hgvsp: ENST00000359606.3:c.1431C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1536
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13178
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42613
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3302
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 166
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 543
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ala467Ala
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: South Asian
population: Latino
population: European (Finnish)
population: Other
population: East Asian
reference allele: C
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum

20-32228230-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32228230
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 32228230
    reference: chr 20
allele count: 1
allele frequency: 8.246878556466378e-6
allele num: 121258
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000262653
  ensembl transcript: ENST00000346541
  gene symbol: CBFA2T2
  hgvsc: ENST00000346541.3:c.1408G>T
  hgvsp: ENSP00000262653.7:p.Val470Leu
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000443398
  ensembl transcript: ENST00000543126
  gene symbol: CBFA2T2
  hgvsc: ENST00000543126.1:c.52G>T
  hgvsp: ENSP00000443398.1:p.Val18Leu
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000345810
  ensembl transcript: ENST00000342704
  gene symbol: CBFA2T2
  hgvsc: ENST00000342704.6:c.1381G>T
  hgvsp: ENSP00000345810.5:p.Val461Leu
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000352622
  ensembl transcript: ENST00000359606
  gene symbol: CBFA2T2
  hgvsc: ENST00000359606.3:c.1438G>T
  hgvsp: ENSP00000352622.3:p.Val480Leu
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000380902
  ensembl transcript: ENST00000397800
  gene symbol: CBFA2T2
  hgvsc: ENST00000397800.1:c.1321G>T
  hgvsp: ENSP00000380902.1:p.Val441Leu
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000364428
  ensembl transcript: ENST00000375279
  gene symbol: CBFA2T2
  hgvsc: ENST00000375279.2:c.1408G>T
  hgvsp: ENSP00000364428.2:p.Val470Leu
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000433270
  ensembl transcript: ENST00000492345
  gene symbol: CBFA2T2
  hgvsc: ENST00000492345.1:c.1321G>T
  hgvsp: ENSP00000433270.1:p.Val441Leu
  variant of: http://identifiers.org/hgnc/1536
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13252
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42616
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3305
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1218
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 212
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Val470Leu
num of homozygotes: 0
population: Other
population: African
population: Latino
population: South Asian
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum

20-32228239-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32228239
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 32228239
    reference: chr 20
allele count: 3
allele frequency: 2.472921509471289e-5
allele num: 121314
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000345810
  ensembl transcript: ENST00000342704
  gene symbol: CBFA2T2
  hgvsc: ENST00000342704.6:c.1390A>G
  hgvsp: ENSP00000345810.5:p.Thr464Ala
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000433270
  ensembl transcript: ENST00000492345
  gene symbol: CBFA2T2
  hgvsc: ENST00000492345.1:c.1330A>G
  hgvsp: ENSP00000433270.1:p.Thr444Ala
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000380902
  ensembl transcript: ENST00000397800
  gene symbol: CBFA2T2
  hgvsc: ENST00000397800.1:c.1330A>G
  hgvsp: ENSP00000380902.1:p.Thr444Ala
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000443398
  ensembl transcript: ENST00000543126
  gene symbol: CBFA2T2
  hgvsc: ENST00000543126.1:c.61A>G
  hgvsp: ENSP00000443398.1:p.Thr21Ala
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000364428
  ensembl transcript: ENST00000375279
  gene symbol: CBFA2T2
  hgvsc: ENST00000375279.2:c.1417A>G
  hgvsp: ENSP00000364428.2:p.Thr473Ala
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000262653
  ensembl transcript: ENST00000346541
  gene symbol: CBFA2T2
  hgvsc: ENST00000346541.3:c.1417A>G
  hgvsp: ENSP00000262653.7:p.Thr473Ala
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000352622
  ensembl transcript: ENST00000359606
  gene symbol: CBFA2T2
  hgvsc: ENST00000359606.3:c.1447A>G
  hgvsp: ENSP00000352622.3:p.Thr483Ala
  variant of: http://identifiers.org/hgnc/1536
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3295
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13333
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42604
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 740
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 167
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 536
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Thr473Ala
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: East Asian
population: European (Finnish)
population: African
population: Latino
population: South Asian
reference allele: A
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum

20-32228252-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32228252
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 32228252
    reference: chr 20
allele count: 1
allele frequency: 8.242392271933006e-6
allele num: 121324
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000352622
  ensembl transcript: ENST00000359606
  gene symbol: CBFA2T2
  hgvsc: ENST00000359606.3:c.1460G>A
  hgvsp: ENSP00000352622.3:p.Arg487Gln
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000364428
  ensembl transcript: ENST00000375279
  gene symbol: CBFA2T2
  hgvsc: ENST00000375279.2:c.1430G>A
  hgvsp: ENSP00000364428.2:p.Arg477Gln
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000433270
  ensembl transcript: ENST00000492345
  gene symbol: CBFA2T2
  hgvsc: ENST00000492345.1:c.1343G>A
  hgvsp: ENSP00000433270.1:p.Arg448Gln
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000262653
  ensembl transcript: ENST00000346541
  gene symbol: CBFA2T2
  hgvsc: ENST00000346541.3:c.1430G>A
  hgvsp: ENSP00000262653.7:p.Arg477Gln
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000443398
  ensembl transcript: ENST00000543126
  gene symbol: CBFA2T2
  hgvsc: ENST00000543126.1:c.74G>A
  hgvsp: ENSP00000443398.1:p.Arg25Gln
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000345810
  ensembl transcript: ENST00000342704
  gene symbol: CBFA2T2
  hgvsc: ENST00000342704.6:c.1403G>A
  hgvsp: ENSP00000345810.5:p.Arg468Gln
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000380902
  ensembl transcript: ENST00000397800
  gene symbol: CBFA2T2
  hgvsc: ENST00000397800.1:c.1343G>A
  hgvsp: ENSP00000380902.1:p.Arg448Gln
  variant of: http://identifiers.org/hgnc/1536
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42519
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13418
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3308
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1211
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 535
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 212
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Arg477Gln
num of homozygotes: 0
population: South Asian
population: Latino
population: African
population: Other
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: ClippingRankSum

20-32228263-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32228263
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 32228263
    reference: chr 20
allele count: 1
allele frequency: 8.24279991427488e-6
allele num: 121318
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000443398
  ensembl transcript: ENST00000543126
  gene symbol: CBFA2T2
  hgvsc: ENST00000543126.1:c.85A>G
  hgvsp: ENSP00000443398.1:p.Thr29Ala
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000380902
  ensembl transcript: ENST00000397800
  gene symbol: CBFA2T2
  hgvsc: ENST00000397800.1:c.1354A>G
  hgvsp: ENSP00000380902.1:p.Thr452Ala
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000352622
  ensembl transcript: ENST00000359606
  gene symbol: CBFA2T2
  hgvsc: ENST00000359606.3:c.1471A>G
  hgvsp: ENSP00000352622.3:p.Thr491Ala
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000433270
  ensembl transcript: ENST00000492345
  gene symbol: CBFA2T2
  hgvsc: ENST00000492345.1:c.1354A>G
  hgvsp: ENSP00000433270.1:p.Thr452Ala
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000262653
  ensembl transcript: ENST00000346541
  gene symbol: CBFA2T2
  hgvsc: ENST00000346541.3:c.1441A>G
  hgvsp: ENSP00000262653.7:p.Thr481Ala
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000364428
  ensembl transcript: ENST00000375279
  gene symbol: CBFA2T2
  hgvsc: ENST00000375279.2:c.1441A>G
  hgvsp: ENSP00000364428.2:p.Thr481Ala
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000345810
  ensembl transcript: ENST00000342704
  gene symbol: CBFA2T2
  hgvsc: ENST00000342704.6:c.1414A>G
  hgvsp: ENSP00000345810.5:p.Thr472Ala
  variant of: http://identifiers.org/hgnc/1536
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 600
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13446
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42483
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3307
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1153
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 532
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5314
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51207
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Thr481Ala
num of homozygotes: 0
population: European (Finnish)
population: Other
population: East Asian
population: European (Non-Finnish)
population: African
population: Latino
population: South Asian
reference allele: A
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQ

20-32228271-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32228271
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 32228271
    reference: chr 20
allele count: 12
allele frequency: 9.893153937475267e-5
allele num: 121296
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000443398
  ensembl transcript: ENST00000543126
  gene symbol: CBFA2T2
  hgvsc: ENST00000543126.1:c.93G>A
  hgvsp: ENST00000543126.1:c.93G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000345810
  ensembl transcript: ENST00000342704
  gene symbol: CBFA2T2
  hgvsc: ENST00000342704.6:c.1422G>A
  hgvsp: ENST00000342704.6:c.1422G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000364428
  ensembl transcript: ENST00000375279
  gene symbol: CBFA2T2
  hgvsc: ENST00000375279.2:c.1449G>A
  hgvsp: ENST00000375279.2:c.1449G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000262653
  ensembl transcript: ENST00000346541
  gene symbol: CBFA2T2
  hgvsc: ENST00000346541.3:c.1449G>A
  hgvsp: ENST00000346541.3:c.1449G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000433270
  ensembl transcript: ENST00000492345
  gene symbol: CBFA2T2
  hgvsc: ENST00000492345.1:c.1362G>A
  hgvsp: ENST00000492345.1:c.1362G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000380902
  ensembl transcript: ENST00000397800
  gene symbol: CBFA2T2
  hgvsc: ENST00000397800.1:c.1362G>A
  hgvsp: ENST00000397800.1:c.1362G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000352622
  ensembl transcript: ENST00000359606
  gene symbol: CBFA2T2
  hgvsc: ENST00000359606.3:c.1479G>A
  hgvsp: ENST00000359606.3:c.1479G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1536
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 13460
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 594
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42411
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3320
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1207
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1150
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 169
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 528
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Ala483Ala
num of homozygotes: 0
population: South Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: Other
population: East Asian
reference allele: G
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum

20-32228274-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32228274
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 32228274
    reference: chr 20
allele count: 2
allele frequency: 1.648994937585542e-5
allele num: 121286
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000345810
  ensembl transcript: ENST00000342704
  gene symbol: CBFA2T2
  hgvsc: ENST00000342704.6:c.1425T>A
  hgvsp: ENSP00000345810.5:p.Asp475Glu
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000364428
  ensembl transcript: ENST00000375279
  gene symbol: CBFA2T2
  hgvsc: ENST00000375279.2:c.1452T>A
  hgvsp: ENSP00000364428.2:p.Asp484Glu
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000443398
  ensembl transcript: ENST00000543126
  gene symbol: CBFA2T2
  hgvsc: ENST00000543126.1:c.96T>A
  hgvsp: ENSP00000443398.1:p.Asp32Glu
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000433270
  ensembl transcript: ENST00000492345
  gene symbol: CBFA2T2
  hgvsc: ENST00000492345.1:c.1365T>A
  hgvsp: ENSP00000433270.1:p.Asp455Glu
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000380902
  ensembl transcript: ENST00000397800
  gene symbol: CBFA2T2
  hgvsc: ENST00000397800.1:c.1365T>A
  hgvsp: ENSP00000380902.1:p.Asp455Glu
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000262653
  ensembl transcript: ENST00000346541
  gene symbol: CBFA2T2
  hgvsc: ENST00000346541.3:c.1452T>A
  hgvsp: ENSP00000262653.7:p.Asp484Glu
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000352622
  ensembl transcript: ENST00000359606
  gene symbol: CBFA2T2
  hgvsc: ENST00000359606.3:c.1482T>A
  hgvsp: ENSP00000352622.3:p.Asp494Glu
  variant of: http://identifiers.org/hgnc/1536
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 42403
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13466
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3312
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 594
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1207
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51162
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 530
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 99
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Asp484Glu
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Other
reference allele: T
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD

20-32228277-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32228277
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 32228277
    reference: chr 20
allele count: 1
allele frequency: 8.245926512302922e-6
allele num: 121272
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000433270
  ensembl transcript: ENST00000492345
  gene symbol: CBFA2T2
  hgvsc: ENST00000492345.1:c.1368C>G
  hgvsp: ENST00000492345.1:c.1368C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000364428
  ensembl transcript: ENST00000375279
  gene symbol: CBFA2T2
  hgvsc: ENST00000375279.2:c.1455C>G
  hgvsp: ENST00000375279.2:c.1455C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000380902
  ensembl transcript: ENST00000397800
  gene symbol: CBFA2T2
  hgvsc: ENST00000397800.1:c.1368C>G
  hgvsp: ENST00000397800.1:c.1368C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000352622
  ensembl transcript: ENST00000359606
  gene symbol: CBFA2T2
  hgvsc: ENST00000359606.3:c.1485C>G
  hgvsp: ENST00000359606.3:c.1485C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000345810
  ensembl transcript: ENST00000342704
  gene symbol: CBFA2T2
  hgvsc: ENST00000342704.6:c.1428C>G
  hgvsp: ENST00000342704.6:c.1428C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000262653
  ensembl transcript: ENST00000346541
  gene symbol: CBFA2T2
  hgvsc: ENST00000346541.3:c.1455C>G
  hgvsp: ENST00000346541.3:c.1455C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000443398
  ensembl transcript: ENST00000543126
  gene symbol: CBFA2T2
  hgvsc: ENST00000543126.1:c.99C>G
  hgvsp: ENST00000543126.1:c.99C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1536
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42386
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3316
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13460
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1204
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 170
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5303
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 212
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Val485Val
num of homozygotes: 0
population: East Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: African
population: South Asian
population: European (Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum

20-32228279-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32228279
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 32228279
    reference: chr 20
allele count: 2
allele frequency: 1.649402916144356e-5
allele num: 121256
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000352622
  ensembl transcript: ENST00000359606
  gene symbol: CBFA2T2
  hgvsc: ENST00000359606.3:c.1487A>G
  hgvsp: ENSP00000352622.3:p.Lys496Arg
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000443398
  ensembl transcript: ENST00000543126
  gene symbol: CBFA2T2
  hgvsc: ENST00000543126.1:c.101A>G
  hgvsp: ENSP00000443398.1:p.Lys34Arg
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000345810
  ensembl transcript: ENST00000342704
  gene symbol: CBFA2T2
  hgvsc: ENST00000342704.6:c.1430A>G
  hgvsp: ENSP00000345810.5:p.Lys477Arg
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000433270
  ensembl transcript: ENST00000492345
  gene symbol: CBFA2T2
  hgvsc: ENST00000492345.1:c.1370A>G
  hgvsp: ENSP00000433270.1:p.Lys457Arg
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000364428
  ensembl transcript: ENST00000375279
  gene symbol: CBFA2T2
  hgvsc: ENST00000375279.2:c.1457A>G
  hgvsp: ENSP00000364428.2:p.Lys486Arg
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000380902
  ensembl transcript: ENST00000397800
  gene symbol: CBFA2T2
  hgvsc: ENST00000397800.1:c.1370A>G
  hgvsp: ENSP00000380902.1:p.Lys457Arg
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000262653
  ensembl transcript: ENST00000346541
  gene symbol: CBFA2T2
  hgvsc: ENST00000346541.3:c.1457A>G
  hgvsp: ENSP00000262653.7:p.Lys486Arg
  variant of: http://identifiers.org/hgnc/1536
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3313
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42371
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13448
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1204
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 530
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1147
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Lys486Arg
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Other
population: East Asian
population: Latino
reference allele: A
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: DP

20-32228283-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32228283
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 32228283
    reference: chr 20
allele count: 1
allele frequency: 8.249872126982032e-6
allele num: 121214
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000352622
  ensembl transcript: ENST00000359606
  gene symbol: CBFA2T2
  hgvsc: ENST00000359606.3:c.1491G>A
  hgvsp: ENST00000359606.3:c.1491G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000262653
  ensembl transcript: ENST00000346541
  gene symbol: CBFA2T2
  hgvsc: ENST00000346541.3:c.1461G>A
  hgvsp: ENST00000346541.3:c.1461G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000433270
  ensembl transcript: ENST00000492345
  gene symbol: CBFA2T2
  hgvsc: ENST00000492345.1:c.1374G>A
  hgvsp: ENST00000492345.1:c.1374G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000364428
  ensembl transcript: ENST00000375279
  gene symbol: CBFA2T2
  hgvsc: ENST00000375279.2:c.1461G>A
  hgvsp: ENST00000375279.2:c.1461G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000345810
  ensembl transcript: ENST00000342704
  gene symbol: CBFA2T2
  hgvsc: ENST00000342704.6:c.1434G>A
  hgvsp: ENST00000342704.6:c.1434G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000380902
  ensembl transcript: ENST00000397800
  gene symbol: CBFA2T2
  hgvsc: ENST00000397800.1:c.1374G>A
  hgvsp: ENST00000397800.1:c.1374G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000443398
  ensembl transcript: ENST00000543126
  gene symbol: CBFA2T2
  hgvsc: ENST00000543126.1:c.105G>A
  hgvsp: ENST00000543126.1:c.105G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1536
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42328
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13439
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 597
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3312
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1136
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 212
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Arg487Arg
num of homozygotes: 0
population: South Asian
population: African
population: European (Non-Finnish)
population: Latino
population: East Asian
population: European (Finnish)
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum

http://identifiers.org/exac.variant/20-32228284-C-CA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32228284
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 32228285
    reference: chr 20
allele count: 1
allele frequency: 8.250144377526608e-6
allele num: 121210
alternate allele: CA
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000380902
  ensembl transcript: ENST00000397800
  gene symbol: CBFA2T2
  hgvsc: ENST00000397800.1:c.1376dupA
  hgvsp: ENSP00000380902.1:p.Ala460GlyfsTer11
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000345810
  ensembl transcript: ENST00000342704
  gene symbol: CBFA2T2
  hgvsc: ENST00000342704.6:c.1436dupA
  hgvsp: ENSP00000345810.5:p.Ala480GlyfsTer11
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000443398
  ensembl transcript: ENST00000543126
  gene symbol: CBFA2T2
  hgvsc: ENST00000543126.1:c.107dupA
  hgvsp: ENSP00000443398.1:p.Ala37GlyfsTer11
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000262653
  ensembl transcript: ENST00000346541
  gene symbol: CBFA2T2
  hgvsc: ENST00000346541.3:c.1463dupA
  hgvsp: ENSP00000262653.7:p.Ala489GlyfsTer11
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000433270
  ensembl transcript: ENST00000492345
  gene symbol: CBFA2T2
  hgvsc: ENST00000492345.1:c.1376dupA
  hgvsp: ENSP00000433270.1:p.Ala460GlyfsTer11
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000352622
  ensembl transcript: ENST00000359606
  gene symbol: CBFA2T2
  hgvsc: ENST00000359606.3:c.1493dupA
  hgvsp: ENSP00000352622.3:p.Ala499GlyfsTer11
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000364428
  ensembl transcript: ENST00000375279
  gene symbol: CBFA2T2
  hgvsc: ENST00000375279.2:c.1463dupA
  hgvsp: ENSP00000364428.2:p.Ala489GlyfsTer11
  variant of: http://identifiers.org/hgnc/1536
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13446
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42339
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3300
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 595
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1200
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 212
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 526
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 737
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Ala489GlyfsTer11
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: South Asian
population: Latino
population: Other
population: European (Finnish)
population: East Asian
reference allele: C
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: MQ
site quality: BaseQRankSum

20-32228289-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32228289
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 32228289
    reference: chr 20
allele count: 2
allele frequency: 1.650982334489021e-5
allele num: 121140
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000262653
  ensembl transcript: ENST00000346541
  gene symbol: CBFA2T2
  hgvsc: ENST00000346541.3:c.1467C>T
  hgvsp: ENST00000346541.3:c.1467C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000364428
  ensembl transcript: ENST00000375279
  gene symbol: CBFA2T2
  hgvsc: ENST00000375279.2:c.1467C>T
  hgvsp: ENST00000375279.2:c.1467C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000443398
  ensembl transcript: ENST00000543126
  gene symbol: CBFA2T2
  hgvsc: ENST00000543126.1:c.111C>T
  hgvsp: ENST00000543126.1:c.111C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000352622
  ensembl transcript: ENST00000359606
  gene symbol: CBFA2T2
  hgvsc: ENST00000359606.3:c.1497C>T
  hgvsp: ENST00000359606.3:c.1497C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000433270
  ensembl transcript: ENST00000492345
  gene symbol: CBFA2T2
  hgvsc: ENST00000492345.1:c.1380C>T
  hgvsp: ENST00000492345.1:c.1380C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000345810
  ensembl transcript: ENST00000342704
  gene symbol: CBFA2T2
  hgvsc: ENST00000342704.6:c.1440C>T
  hgvsp: ENST00000342704.6:c.1440C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000380902
  ensembl transcript: ENST00000397800
  gene symbol: CBFA2T2
  hgvsc: ENST00000397800.1:c.1380C>T
  hgvsp: ENST00000397800.1:c.1380C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1536
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 42301
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3288
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13426
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5262
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1133
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 169
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Ala489Ala
num of homozygotes: 0
population: East Asian
population: African
population: European (Finnish)
population: Latino
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD

20-32228290-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32228290
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 32228290
    reference: chr 20
allele count: 10
allele frequency: 8.255865792645674e-5
allele num: 121126
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000380902
  ensembl transcript: ENST00000397800
  gene symbol: CBFA2T2
  hgvsc: ENST00000397800.1:c.1381G>A
  hgvsp: ENSP00000380902.1:p.Ala461Thr
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000345810
  ensembl transcript: ENST00000342704
  gene symbol: CBFA2T2
  hgvsc: ENST00000342704.6:c.1441G>A
  hgvsp: ENSP00000345810.5:p.Ala481Thr
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000433270
  ensembl transcript: ENST00000492345
  gene symbol: CBFA2T2
  hgvsc: ENST00000492345.1:c.1381G>A
  hgvsp: ENSP00000433270.1:p.Ala461Thr
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000262653
  ensembl transcript: ENST00000346541
  gene symbol: CBFA2T2
  hgvsc: ENST00000346541.3:c.1468G>A
  hgvsp: ENSP00000262653.7:p.Ala490Thr
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000443398
  ensembl transcript: ENST00000543126
  gene symbol: CBFA2T2
  hgvsc: ENST00000543126.1:c.112G>A
  hgvsp: ENSP00000443398.1:p.Ala38Thr
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000364428
  ensembl transcript: ENST00000375279
  gene symbol: CBFA2T2
  hgvsc: ENST00000375279.2:c.1468G>A
  hgvsp: ENSP00000364428.2:p.Ala490Thr
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000352622
  ensembl transcript: ENST00000359606
  gene symbol: CBFA2T2
  hgvsc: ENST00000359606.3:c.1498G>A
  hgvsp: ENSP00000352622.3:p.Ala500Thr
  variant of: http://identifiers.org/hgnc/1536
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42277
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13415
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3292
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 597
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 170
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 218
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1191
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1129
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Ala490Thr
num of homozygotes: 0
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: East Asian
population: Other
population: South Asian
reference allele: G
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD

20-32228291-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32228291
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 32228291
    reference: chr 20
allele count: 1
allele frequency: 8.256138438929344e-6
allele num: 121122
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000262653
  ensembl transcript: ENST00000346541
  gene symbol: CBFA2T2
  hgvsc: ENST00000346541.3:c.1469C>T
  hgvsp: ENSP00000262653.7:p.Ala490Val
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000433270
  ensembl transcript: ENST00000492345
  gene symbol: CBFA2T2
  hgvsc: ENST00000492345.1:c.1382C>T
  hgvsp: ENSP00000433270.1:p.Ala461Val
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000352622
  ensembl transcript: ENST00000359606
  gene symbol: CBFA2T2
  hgvsc: ENST00000359606.3:c.1499C>T
  hgvsp: ENSP00000352622.3:p.Ala500Val
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000443398
  ensembl transcript: ENST00000543126
  gene symbol: CBFA2T2
  hgvsc: ENST00000543126.1:c.113C>T
  hgvsp: ENSP00000443398.1:p.Ala38Val
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000345810
  ensembl transcript: ENST00000342704
  gene symbol: CBFA2T2
  hgvsc: ENST00000342704.6:c.1442C>T
  hgvsp: ENSP00000345810.5:p.Ala481Val
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000364428
  ensembl transcript: ENST00000375279
  gene symbol: CBFA2T2
  hgvsc: ENST00000375279.2:c.1469C>T
  hgvsp: ENSP00000364428.2:p.Ala490Val
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000380902
  ensembl transcript: ENST00000397800
  gene symbol: CBFA2T2
  hgvsc: ENST00000397800.1:c.1382C>T
  hgvsp: ENSP00000380902.1:p.Ala461Val
  variant of: http://identifiers.org/hgnc/1536
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13437
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3283
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42281
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1192
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 737
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 210
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Ala490Val
num of homozygotes: 0
population: African
population: Other
population: South Asian
population: Latino
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: QD

20-32228294-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32228294
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 32228294
    reference: chr 20
allele count: 1
allele frequency: 8.257501940512956e-6
allele num: 121102
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000345810
  ensembl transcript: ENST00000342704
  gene symbol: CBFA2T2
  hgvsc: ENST00000342704.6:c.1445A>T
  hgvsp: ENSP00000345810.5:p.Glu482Val
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000380902
  ensembl transcript: ENST00000397800
  gene symbol: CBFA2T2
  hgvsc: ENST00000397800.1:c.1385A>T
  hgvsp: ENSP00000380902.1:p.Glu462Val
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000352622
  ensembl transcript: ENST00000359606
  gene symbol: CBFA2T2
  hgvsc: ENST00000359606.3:c.1502A>T
  hgvsp: ENSP00000352622.3:p.Glu501Val
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000262653
  ensembl transcript: ENST00000346541
  gene symbol: CBFA2T2
  hgvsc: ENST00000346541.3:c.1472A>T
  hgvsp: ENSP00000262653.7:p.Glu491Val
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000433270
  ensembl transcript: ENST00000492345
  gene symbol: CBFA2T2
  hgvsc: ENST00000492345.1:c.1385A>T
  hgvsp: ENSP00000433270.1:p.Glu462Val
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000443398
  ensembl transcript: ENST00000543126
  gene symbol: CBFA2T2
  hgvsc: ENST00000543126.1:c.116A>T
  hgvsp: ENSP00000443398.1:p.Glu39Val
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000364428
  ensembl transcript: ENST00000375279
  gene symbol: CBFA2T2
  hgvsc: ENST00000375279.2:c.1472A>T
  hgvsp: ENSP00000364428.2:p.Glu491Val
  variant of: http://identifiers.org/hgnc/1536
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13422
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42267
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3273
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 519
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 211
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Glu491Val
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Other
reference allele: A
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum

20-32228298-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32228298
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 32228298
    reference: chr 20
allele count: 1
allele frequency: 8.261322141995606e-6
allele num: 121046
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000345810
  ensembl transcript: ENST00000342704
  gene symbol: CBFA2T2
  hgvsc: ENST00000342704.6:c.1449T>C
  hgvsp: ENST00000342704.6:c.1449T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000380902
  ensembl transcript: ENST00000397800
  gene symbol: CBFA2T2
  hgvsc: ENST00000397800.1:c.1389T>C
  hgvsp: ENST00000397800.1:c.1389T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000433270
  ensembl transcript: ENST00000492345
  gene symbol: CBFA2T2
  hgvsc: ENST00000492345.1:c.1389T>C
  hgvsp: ENST00000492345.1:c.1389T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000364428
  ensembl transcript: ENST00000375279
  gene symbol: CBFA2T2
  hgvsc: ENST00000375279.2:c.1476T>C
  hgvsp: ENST00000375279.2:c.1476T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000443398
  ensembl transcript: ENST00000543126
  gene symbol: CBFA2T2
  hgvsc: ENST00000543126.1:c.120T>C
  hgvsp: ENST00000543126.1:c.120T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000352622
  ensembl transcript: ENST00000359606
  gene symbol: CBFA2T2
  hgvsc: ENST00000359606.3:c.1506T>C
  hgvsp: ENST00000359606.3:c.1506T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000262653
  ensembl transcript: ENST00000346541
  gene symbol: CBFA2T2
  hgvsc: ENST00000346541.3:c.1476T>C
  hgvsp: ENST00000346541.3:c.1476T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1536
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13377
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42221
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3274
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 300
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 210
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1120
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5245
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Asp492Asp
num of homozygotes: 0
population: African
population: Other
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
reference allele: T
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP

20-32228301-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32228301
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 32228301
    reference: chr 20
allele count: 2
allele frequency: 1.652728655009421e-5
allele num: 121012
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000262653
  ensembl transcript: ENST00000346541
  gene symbol: CBFA2T2
  hgvsc: ENST00000346541.3:c.1479T>G
  hgvsp: ENST00000346541.3:c.1479T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000364428
  ensembl transcript: ENST00000375279
  gene symbol: CBFA2T2
  hgvsc: ENST00000375279.2:c.1479T>G
  hgvsp: ENST00000375279.2:c.1479T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000433270
  ensembl transcript: ENST00000492345
  gene symbol: CBFA2T2
  hgvsc: ENST00000492345.1:c.1392T>G
  hgvsp: ENST00000492345.1:c.1392T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000380902
  ensembl transcript: ENST00000397800
  gene symbol: CBFA2T2
  hgvsc: ENST00000397800.1:c.1392T>G
  hgvsp: ENST00000397800.1:c.1392T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000345810
  ensembl transcript: ENST00000342704
  gene symbol: CBFA2T2
  hgvsc: ENST00000342704.6:c.1452T>G
  hgvsp: ENST00000342704.6:c.1452T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000352622
  ensembl transcript: ENST00000359606
  gene symbol: CBFA2T2
  hgvsc: ENST00000359606.3:c.1509T>G
  hgvsp: ENST00000359606.3:c.1509T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000443398
  ensembl transcript: ENST00000543126
  gene symbol: CBFA2T2
  hgvsc: ENST00000543126.1:c.123T>G
  hgvsp: ENST00000543126.1:c.123T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1536
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42201
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 594
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3263
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13354
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 737
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 169
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 335
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 518
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 209
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Ala493Ala
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Finnish)
population: East Asian
population: Other
population: African
population: European (Non-Finnish)
reference allele: T
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff

20-32228302-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32228302
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 32228302
    reference: chr 20
allele count: 1
allele frequency: 8.265829062654984e-6
allele num: 120980
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000364428
  ensembl transcript: ENST00000375279
  gene symbol: CBFA2T2
  hgvsc: ENST00000375279.2:c.1480T>G
  hgvsp: ENSP00000364428.2:p.Phe494Val
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000380902
  ensembl transcript: ENST00000397800
  gene symbol: CBFA2T2
  hgvsc: ENST00000397800.1:c.1393T>G
  hgvsp: ENSP00000380902.1:p.Phe465Val
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000443398
  ensembl transcript: ENST00000543126
  gene symbol: CBFA2T2
  hgvsc: ENST00000543126.1:c.124T>G
  hgvsp: ENSP00000443398.1:p.Phe42Val
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000433270
  ensembl transcript: ENST00000492345
  gene symbol: CBFA2T2
  hgvsc: ENST00000492345.1:c.1393T>G
  hgvsp: ENSP00000433270.1:p.Phe465Val
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000262653
  ensembl transcript: ENST00000346541
  gene symbol: CBFA2T2
  hgvsc: ENST00000346541.3:c.1480T>G
  hgvsp: ENSP00000262653.7:p.Phe494Val
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000352622
  ensembl transcript: ENST00000359606
  gene symbol: CBFA2T2
  hgvsc: ENST00000359606.3:c.1510T>G
  hgvsp: ENSP00000352622.3:p.Phe504Val
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000345810
  ensembl transcript: ENST00000342704
  gene symbol: CBFA2T2
  hgvsc: ENST00000342704.6:c.1453T>G
  hgvsp: ENSP00000345810.5:p.Phe485Val
  variant of: http://identifiers.org/hgnc/1536
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42187
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 594
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3259
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13339
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 737
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5232
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 358
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 168
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Phe494Val
num of homozygotes: 0
population: African
population: Other
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Latino
reference allele: T
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ

20-32228308-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32228308
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 32228308
    reference: chr 20
allele count: 5
allele frequency: 4.135922972570559e-5
allele num: 120892
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000380902
  ensembl transcript: ENST00000397800
  gene symbol: CBFA2T2
  hgvsc: ENST00000397800.1:c.1399G>A
  hgvsp: ENSP00000380902.1:p.Val467Ile
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000433270
  ensembl transcript: ENST00000492345
  gene symbol: CBFA2T2
  hgvsc: ENST00000492345.1:c.1399G>A
  hgvsp: ENSP00000433270.1:p.Val467Ile
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000443398
  ensembl transcript: ENST00000543126
  gene symbol: CBFA2T2
  hgvsc: ENST00000543126.1:c.130G>A
  hgvsp: ENSP00000443398.1:p.Val44Ile
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000352622
  ensembl transcript: ENST00000359606
  gene symbol: CBFA2T2
  hgvsc: ENST00000359606.3:c.1516G>A
  hgvsp: ENSP00000352622.3:p.Val506Ile
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000345810
  ensembl transcript: ENST00000342704
  gene symbol: CBFA2T2
  hgvsc: ENST00000342704.6:c.1459G>A
  hgvsp: ENSP00000345810.5:p.Val487Ile
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000364428
  ensembl transcript: ENST00000375279
  gene symbol: CBFA2T2
  hgvsc: ENST00000375279.2:c.1486G>A
  hgvsp: ENSP00000364428.2:p.Val496Ile
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000262653
  ensembl transcript: ENST00000346541
  gene symbol: CBFA2T2
  hgvsc: ENST00000346541.3:c.1486G>A
  hgvsp: ENSP00000262653.7:p.Val496Ile
  variant of: http://identifiers.org/hgnc/1536
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42095
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 590
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13293
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3270
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1103
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 737
  bin: 9.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Val496Ile
num of homozygotes: 0
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: East Asian
population: South Asian
population: Latino
reference allele: G
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff

20-32228313-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32228313
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 32228313
    reference: chr 20
allele count: 2
allele frequency: 1.655519502019734e-5
allele num: 120808
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000443398
  ensembl transcript: ENST00000543126
  gene symbol: CBFA2T2
  hgvsc: ENST00000543126.1:c.135C>T
  hgvsp: ENST00000543126.1:c.135C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000352622
  ensembl transcript: ENST00000359606
  gene symbol: CBFA2T2
  hgvsc: ENST00000359606.3:c.1521C>T
  hgvsp: ENST00000359606.3:c.1521C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000433270
  ensembl transcript: ENST00000492345
  gene symbol: CBFA2T2
  hgvsc: ENST00000492345.1:c.1404C>T
  hgvsp: ENST00000492345.1:c.1404C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000380902
  ensembl transcript: ENST00000397800
  gene symbol: CBFA2T2
  hgvsc: ENST00000397800.1:c.1404C>T
  hgvsp: ENST00000397800.1:c.1404C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000364428
  ensembl transcript: ENST00000375279
  gene symbol: CBFA2T2
  hgvsc: ENST00000375279.2:c.1491C>T
  hgvsp: ENST00000375279.2:c.1491C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000262653
  ensembl transcript: ENST00000346541
  gene symbol: CBFA2T2
  hgvsc: ENST00000346541.3:c.1491C>T
  hgvsp: ENST00000346541.3:c.1491C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000345810
  ensembl transcript: ENST00000342704
  gene symbol: CBFA2T2
  hgvsc: ENST00000342704.6:c.1464C>T
  hgvsp: ENST00000342704.6:c.1464C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1536
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13278
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3260
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41985
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 163
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1164
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1100
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Ile497Ile
num of homozygotes: 0
population: Latino
population: South Asian
population: African
population: East Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: DP

20-32228315-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32228315
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 32228315
    reference: chr 20
allele count: 387
allele frequency: 3.204013710198202e-3
allele num: 120786
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000380902
  ensembl transcript: ENST00000397800
  gene symbol: CBFA2T2
  hgvsc: ENST00000397800.1:c.1406A>G
  hgvsp: ENSP00000380902.1:p.Asn469Ser
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000443398
  ensembl transcript: ENST00000543126
  gene symbol: CBFA2T2
  hgvsc: ENST00000543126.1:c.137A>G
  hgvsp: ENSP00000443398.1:p.Asn46Ser
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000262653
  ensembl transcript: ENST00000346541
  gene symbol: CBFA2T2
  hgvsc: ENST00000346541.3:c.1493A>G
  hgvsp: ENSP00000262653.7:p.Asn498Ser
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000352622
  ensembl transcript: ENST00000359606
  gene symbol: CBFA2T2
  hgvsc: ENST00000359606.3:c.1523A>G
  hgvsp: ENSP00000352622.3:p.Asn508Ser
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000433270
  ensembl transcript: ENST00000492345
  gene symbol: CBFA2T2
  hgvsc: ENST00000492345.1:c.1406A>G
  hgvsp: ENSP00000433270.1:p.Asn469Ser
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000364428
  ensembl transcript: ENST00000375279
  gene symbol: CBFA2T2
  hgvsc: ENST00000375279.2:c.1493A>G
  hgvsp: ENSP00000364428.2:p.Asn498Ser
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000345810
  ensembl transcript: ENST00000342704
  gene symbol: CBFA2T2
  hgvsc: ENST00000342704.6:c.1466A>G
  hgvsp: ENSP00000345810.5:p.Asn489Ser
  variant of: http://identifiers.org/hgnc/1536
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 4.75e1
  variant carriers: 42
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 5.25e1
  variant carriers: 32
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 13229
  bin: 2.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 6.75e1
  variant carriers: 35
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 4.25e1
  variant carriers: 44
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.75e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 3.75e1
  variant carriers: 29
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 6.25e1
  variant carriers: 31
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.25e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.75e1
  variant carriers: 30
genotype depth: GenotypeDepth
  all individuals: 3222
  bin: 3.25e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 41708
  bin: 2.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.25e1
  variant carriers: 26
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 5.75e1
  variant carriers: 29
genotype quality: GenotypeQuality
  all individuals: 1145
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 561
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 501
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5179
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Asn498Ser
num of homozygotes: 1
population: Other
population: East Asian
population: European (Finnish)
population: South Asian
population: Latino
population: African
population: European (Non-Finnish)
reference allele: A
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD

20-32228316-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32228316
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 32228316
    reference: chr 20
allele count: 1
allele frequency: 8.281573498964803e-6
allele num: 120750
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000345810
  ensembl transcript: ENST00000342704
  gene symbol: CBFA2T2
  hgvsc: ENST00000342704.6:c.1467T>G
  hgvsp: ENSP00000345810.5:p.Asn489Lys
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000380902
  ensembl transcript: ENST00000397800
  gene symbol: CBFA2T2
  hgvsc: ENST00000397800.1:c.1407T>G
  hgvsp: ENSP00000380902.1:p.Asn469Lys
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000262653
  ensembl transcript: ENST00000346541
  gene symbol: CBFA2T2
  hgvsc: ENST00000346541.3:c.1494T>G
  hgvsp: ENSP00000262653.7:p.Asn498Lys
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000433270
  ensembl transcript: ENST00000492345
  gene symbol: CBFA2T2
  hgvsc: ENST00000492345.1:c.1407T>G
  hgvsp: ENSP00000433270.1:p.Asn469Lys
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000364428
  ensembl transcript: ENST00000375279
  gene symbol: CBFA2T2
  hgvsc: ENST00000375279.2:c.1494T>G
  hgvsp: ENSP00000364428.2:p.Asn498Lys
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000352622
  ensembl transcript: ENST00000359606
  gene symbol: CBFA2T2
  hgvsc: ENST00000359606.3:c.1524T>G
  hgvsp: ENSP00000352622.3:p.Asn508Lys
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000443398
  ensembl transcript: ENST00000543126
  gene symbol: CBFA2T2
  hgvsc: ENST00000543126.1:c.138T>G
  hgvsp: ENSP00000443398.1:p.Asn46Lys
  variant of: http://identifiers.org/hgnc/1536
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41729
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 472
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13356
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3331
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 600
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50539
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 201
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 135
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 595
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 166
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1162
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Asn498Lys
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: Other
population: East Asian
population: South Asian
population: African
population: European (Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: QD

20-32228331-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 32228331
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 32228331
    reference: chr 20
allele count: 2
allele frequency: 1.665057111458923e-5
allele num: 120116
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000433270
  ensembl transcript: ENST00000492345
  gene symbol: CBFA2T2
  hgvsc: ENST00000492345.1:c.1422C>T
  hgvsp: ENST00000492345.1:c.1422C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000443398
  ensembl transcript: ENST00000543126
  gene symbol: CBFA2T2
  hgvsc: ENST00000543126.1:c.153C>T
  hgvsp: ENST00000543126.1:c.153C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000364428
  ensembl transcript: ENST00000375279
  gene symbol: CBFA2T2
  hgvsc: ENST00000375279.2:c.1509C>T
  hgvsp: ENST00000375279.2:c.1509C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000262653
  ensembl transcript: ENST00000346541
  gene symbol: CBFA2T2
  hgvsc: ENST00000346541.3:c.1509C>T
  hgvsp: ENST00000346541.3:c.1509C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000345810
  ensembl transcript: ENST00000342704
  gene symbol: CBFA2T2
  hgvsc: ENST00000342704.6:c.1482C>T
  hgvsp: ENST00000342704.6:c.1482C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000380902
  ensembl transcript: ENST00000397800
  gene symbol: CBFA2T2
  hgvsc: ENST00000397800.1:c.1422C>T
  hgvsp: ENST00000397800.1:c.1422C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1536
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000078699
  ensembl protein: ENSP00000352622
  ensembl transcript: ENST00000359606
  gene symbol: CBFA2T2
  hgvsc: ENST00000359606.3:c.1539C>T
  hgvsp: ENST00000359606.3:c.1539C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1536
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3177
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1156
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12988
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41056
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 600
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 571
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 399
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4999
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49215
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1070
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 185
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 134
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Ser503Ser
num of homozygotes: 0
reference allele: C

GenotypeQuality
all individuals: 159
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 310
bin: 8.25e1
variant carriers: 7

GenotypeQuality
all individuals: 626
bin: 7.5e0
variant carriers: 2

GenotypeQuality
all individuals: 2859
bin: 6.75e1
variant carriers: 6

GenotypeQuality
all individuals: 188
bin: 9.25e1
variant carriers: 6

GenotypeQuality
all individuals: 618
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 136
bin: 8.75e1
variant carriers: 4

GenotypeQuality
all individuals: 581
bin: 7.75e1
variant carriers: 4

GenotypeQuality
all individuals: 3836
bin: 2.75e1
variant carriers: 1

GenotypeQuality
all individuals: 527
bin: 5.75e1
variant carriers: 4

South Asian
type: Population
allele count: 141
allele frequency: 1.163174393664412e-2
allele num: 12122
num of homozygotes: 2

European (Finnish)
type: Population
allele count: 20
allele frequency: 3.484320557491289e-3
allele num: 5740
num of homozygotes: 0

African
type: Population
allele count: 47
allele frequency: 5.169379674439067e-3
allele num: 9092
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7460
num of homozygotes: 0

Latino
type: Population
allele count: 103
allele frequency: 1.087185982689466e-2
allele num: 9474
num of homozygotes: 1

Other
type: Population
allele count: 17
allele frequency: 2.219321148825065e-2
allele num: 766
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 805
allele frequency: 1.388745126453438e-2
allele num: 57966
num of homozygotes: 10

DP
type: SiteQuality
SIO_000300: 1.17223e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.52e-2

QD
type: SiteQuality
SIO_000300: 1.381e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.21e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.5e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.39e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.19e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.64e0

FS
type: SiteQuality
SIO_000300: 9.76e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 4121
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 680
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 286
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 554
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 226
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2786
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19973
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 128
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1953
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21365
bin: 6.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9370
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7442
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 57506
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5724
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 748
num of homozygotes: 0

African
type: Population
allele count: 4
allele frequency: 4.415011037527594e-4
allele num: 9060
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11970
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 9.17e-1

QD
type: SiteQuality
SIO_000300: 1.388e1

FS
type: SiteQuality
SIO_000300: 6.41e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.01e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.96e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.9e-3

DP
type: SiteQuality
SIO_000300: 1.142034e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.0e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.43e-1

GenotypeQuality
all individuals: 4719
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20802
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 416
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 765
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4441
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 545
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 395
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 525
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1092
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2130
bin: 3.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9290
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 746
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.751988506955394e-5
allele num: 57078
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8994
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5692
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11794
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7338
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.01e-1

DP
type: SiteQuality
SIO_000300: 1.109686e6

VQSLOD
type: SiteQuality
SIO_000300: -1.372e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.093e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.9e-3

MQRankSum
type: SiteQuality
SIO_000300: 9.350000000000001e-1

MQ
type: SiteQuality
SIO_000300: 5.855e1

QD
type: SiteQuality
SIO_000300: 1.066e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.01e-1

GenotypeQuality
all individuals: 237
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 22187
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5316
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 365
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 428
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15096
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3005
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 119
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1088
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 252
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7104
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.798173056174926e-5
allele num: 55612
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5582
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11150
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8950
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8786
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 730
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.929e0

DP
type: SiteQuality
SIO_000300: 1.020655e6

ClippingRankSum
type: SiteQuality
SIO_000300: -7.65e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 9.6e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.61e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.6e-3

VQSLOD
type: SiteQuality
SIO_000300: 2.13e0

QD
type: SiteQuality
SIO_000300: 1.237e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.679e0

GenotypeQuality
all individuals: 424
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6652
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5495
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1842
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22444
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 690
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 419
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3244
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 119
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1087
bin: 9.75e1
variant carriers: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8962
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5592
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 730
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 8.963786303334529e-5
allele num: 11156
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7112
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8790
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 55602
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.485e0

MQ
type: SiteQuality
SIO_000300: 5.833e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.8e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.34e0

QD
type: SiteQuality
SIO_000300: 3.47e0

VQSLOD
type: SiteQuality
SIO_000300: -4.424e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.19e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.192e0

DP
type: SiteQuality
SIO_000300: 1.004774e6

GenotypeQuality
all individuals: 339
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 117
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 310
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 371
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2247
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3488
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 400
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1085
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 241
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3416
bin: 1.75e1
variant carriers: 0

African
type: Population
allele count: 2
allele frequency: 2.508151492350138e-4
allele num: 7974
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 650
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7506
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.561036528254761e-4
allele num: 6406
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5106
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 50072
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8966
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.9e-3

MQRankSum
type: SiteQuality
SIO_000300: 6.8e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 1.36e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.19e-1

FS
type: SiteQuality
SIO_000300: 4.233e0

DP
type: SiteQuality
SIO_000300: 8.45175e5

ClippingRankSum
type: SiteQuality
SIO_000300: -2.99e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.87e-1

QD
type: SiteQuality
SIO_000300: 1.714e1

GenotypeQuality
all individuals: 3337
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 752
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6178
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6196
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 140
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 172
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 357
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2555
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3070
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 872
bin: 5.25e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 1.282380097460887e-4
allele num: 7798
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7192
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 48700
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4980
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 628
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8556
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6256
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 3.3e0

MQRankSum
type: SiteQuality
SIO_000300: -1.29e-1

QD
type: SiteQuality
SIO_000300: 1.749e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.76e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.01e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.2e-3

DP
type: SiteQuality
SIO_000300: 8.26877e5

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.889999999999999e-1

GenotypeQuality
all individuals: 3439
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1905
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 413
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33357
bin: 9.75e1
variant carriers: 6

GenotypeQuality
all individuals: 86
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3705
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3607
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1948
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 251
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3532
bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16296
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 6
allele frequency: 6.944444444444445e-4
allele num: 8640
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10366
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.305e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.110000000000001e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.848268e6

ClippingRankSum
type: SiteQuality
SIO_000300: -3.78e-1

MQRankSum
type: SiteQuality
SIO_000300: -4.85e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.889999999999999e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 7.85e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 11
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33357
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3532
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1948
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 375
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 500
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1905
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3607
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3705
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3439
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.136475208640157e-5
allele num: 16296
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10366
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -4.85e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.110000000000001e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.78e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.305e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 6.889999999999999e-1

DP
type: SiteQuality
SIO_000300: 2.848268e6

VQSLOD
type: SiteQuality
SIO_000300: 7.85e-1

GenotypeQuality
all individuals: 213
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7105
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 325
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3531
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1901
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3707
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33351
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 172
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 397
bin: 3.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66500
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10360
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.31535077564251e-4
allele num: 8638
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16302
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.984e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

FS
type: SiteQuality
SIO_000300: 3.163e0

DP
type: SiteQuality
SIO_000300: 2.850321e6

MQRankSum
type: SiteQuality
SIO_000300: -2.3e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.37e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.6e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.591e0

VQSLOD
type: SiteQuality
SIO_000300: 1.01e0

QD
type: SiteQuality
SIO_000300: 1.355e1

GenotypeQuality
all individuals: 10
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1948
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3707
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 176
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7469
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3430
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1907
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 281
bin: 3.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16320
num of homozygotes: 0

East Asian
type: Population
allele count: 7
allele frequency: 8.101851851851852e-4
allele num: 8640
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10364
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.126e0

MQ
type: SiteQuality
SIO_000300: 5.961e1

VQSLOD
type: SiteQuality
SIO_000300: 1.9e-1

DP
type: SiteQuality
SIO_000300: 2.852491e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.22e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.3e-1

QD
type: SiteQuality
SIO_000300: 1.464e1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 6.15e0

GenotypeQuality
all individuals: 3
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1953
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33350
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 169
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 78
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3431
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 255
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3539
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3708
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10366
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.11545988258317e-5
allele num: 16352
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66516
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.49e-1

DP
type: SiteQuality
SIO_000300: 2.854132e6

FS
type: SiteQuality
SIO_000300: 6.851e0

MQRankSum
type: SiteQuality
SIO_000300: 1.25e0

VQSLOD
type: SiteQuality
SIO_000300: -2.795e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.733e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.49e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.7e-3

QD
type: SiteQuality
SIO_000300: 1.317e1

MQ
type: SiteQuality
SIO_000300: 5.941e1

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 139
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1912
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 148
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8234
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3428
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 33440
bin: 9.75e1
variant carriers: 851

GenotypeQuality
all individuals: 50
bin: 4.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 41
allele frequency: 3.54978354978355e-3
allele num: 11550
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 13
allele frequency: 1.95388823759281e-4
allele num: 66534
num of homozygotes: 0

African
type: Population
allele count: 829
allele frequency: 7.991131675342202e-2
allele num: 10374
num of homozygotes: 37

Other
type: Population
allele count: 1
allele frequency: 1.103752759381898e-3
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 7
allele frequency: 4.272982541814186e-4
allele num: 16382
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.9e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -3.703e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.03e-1

FS
type: SiteQuality
SIO_000300: 3.916e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.510000000000001e-2

MQ
type: SiteQuality
SIO_000300: 5.97e1

VQSLOD
type: SiteQuality
SIO_000300: 8.54e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.12e-1

DP
type: SiteQuality
SIO_000300: 2.894829e6

QD
type: SiteQuality
SIO_000300: 1.065e1

GenotypeQuality
all individuals: 3579
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3740
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33090
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 8389
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1967
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3477
bin: 7.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16408
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10370
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.508701794463314e-5
allele num: 66538
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.82424e6

QD
type: SiteQuality
SIO_000300: 1.249e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.61e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.33e-1

FS
type: SiteQuality
SIO_000300: 1.963e0

MQRankSum
type: SiteQuality
SIO_000300: -7.96e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.139999999999999e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.6e-3

MQ
type: SiteQuality
SIO_000300: 5.962e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.26e0

GenotypeQuality
all individuals: 92
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1967
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 90
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33088
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1954
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8471
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3740
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3480
bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.502765087761481e-5
allele num: 66544
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10370
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16434
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.15e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.84e-1

QD
type: SiteQuality
SIO_000300: 1.409e1

MQ
type: SiteQuality
SIO_000300: 5.922e1

MQRankSum
type: SiteQuality
SIO_000300: 4.53e-1

FS
type: SiteQuality
SIO_000300: 1.172e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.56e0

DP
type: SiteQuality
SIO_000300: 2.825185e6

BaseQRankSum
type: SiteQuality
SIO_000300: 4.56e0

GenotypeQuality
all individuals: 28
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8567
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3478
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3579
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1956
bin: 7.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16460
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.502584445245823e-5
allele num: 66552
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10370
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -5.88e-1

QD
type: SiteQuality
SIO_000300: 1.431e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.28e0

DP
type: SiteQuality
SIO_000300: 2.826306e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.1e-1

FS
type: SiteQuality
SIO_000300: 1.247e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.7e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -2.625e0

VQSLOD
type: SiteQuality
SIO_000300: 7.1e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 25
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 203
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 80
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3579
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1967
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3739
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1956
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3480
bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

African
type: Population
allele count: 38
allele frequency: 3.665830600038588e-3
allele num: 10366
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16462
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66556
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.7e-3

VQSLOD
type: SiteQuality
SIO_000300: 1.3e0

MQRankSum
type: SiteQuality
SIO_000300: 2.98e-1

QD
type: SiteQuality
SIO_000300: 1.016e1

DP
type: SiteQuality
SIO_000300: 2.826847e6

FS
type: SiteQuality
SIO_000300: 3.46e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.84e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.16e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.95e-1

MQ
type: SiteQuality
SIO_000300: 5.957e1

GenotypeQuality
all individuals: 76
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3579
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 80
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3739
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1956
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3749
bin: 6.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16462
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.502494140272853e-5
allele num: 66556
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10366
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.016e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.7e-3

DP
type: SiteQuality
SIO_000300: 2.826847e6

VQSLOD
type: SiteQuality
SIO_000300: 1.3e0

MQRankSum
type: SiteQuality
SIO_000300: 2.98e-1

FS
type: SiteQuality
SIO_000300: 3.46e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.95e-1

MQ
type: SiteQuality
SIO_000300: 5.957e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.84e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.16e0

GenotypeQuality
all individuals: 8604
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3756
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33075
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 3483
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3740
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1953
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1968
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10368
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.507076109491902e-5
allele num: 66562
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16466
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.75e0

QD
type: SiteQuality
SIO_000300: 1.236e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.6e-3

MQRankSum
type: SiteQuality
SIO_000300: 1.08e0

DP
type: SiteQuality
SIO_000300: 2.822543e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.314e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.17e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.25e0

VQSLOD
type: SiteQuality
SIO_000300: 4.74e-1

MQ
type: SiteQuality
SIO_000300: 5.923e1

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3479
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33074
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 80
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 88
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3756
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1952
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8589
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3740
bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16468
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10368
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.662508662508663e-5
allele num: 11544
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66556
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 4.64e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.9e-3

DP
type: SiteQuality
SIO_000300: 2.822147e6

MQ
type: SiteQuality
SIO_000300: 5.992e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.1e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.2e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.92e-1

QD
type: SiteQuality
SIO_000300: 9.77e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 2.73e-1

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1958
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3482
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1969
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33075
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 76
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3761
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 78
bin: 3.25e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.157675387821255e-4
allele num: 8638
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11542
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66558
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10366
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16480
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.3e-2

MQ
type: SiteQuality
SIO_000300: 5.754e1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.18e-1

QD
type: SiteQuality
SIO_000300: 1.357e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.209e0

VQSLOD
type: SiteQuality
SIO_000300: 2.03e0

MQRankSum
type: SiteQuality
SIO_000300: -1.47e-1

DP
type: SiteQuality
SIO_000300: 2.822439e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.2e-3

GenotypeQuality
all individuals: 16
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3741
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33074
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 1969
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3763
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 192
bin: 2.25e1
variant carriers: 0

Latino
type: Population
allele count: 3
allele frequency: 2.600104004160167e-4
allele num: 11538
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.502358703163967e-5
allele num: 66562
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16490
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10362
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.83e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.49e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.3e-1

MQ
type: SiteQuality
SIO_000300: 5.96e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.3e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

DP
type: SiteQuality
SIO_000300: 2.822617e6

VQSLOD
type: SiteQuality
SIO_000300: 8.76e-1

QD
type: SiteQuality
SIO_000300: 1.332e1

GenotypeQuality
all individuals: 15
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 217
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 84
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3761
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3740
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8676
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1958
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3480
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 4.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.511944360447536e-4
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16484
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10354
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11534
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66550
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.584e0

DP
type: SiteQuality
SIO_000300: 2.821923e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.54e0

QD
type: SiteQuality
SIO_000300: 1.319e1

VQSLOD
type: SiteQuality
SIO_000300: 4.69e-1

MQRankSum
type: SiteQuality
SIO_000300: -9.94e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.976e1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.536e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.27e-1

GenotypeQuality
all individuals: 9
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3761
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1955
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3480
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1968
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3741
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8677
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3578
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.010518407212622e-5
allele num: 66550
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10352
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16484
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11534
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -3.81e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.84e0

DP
type: SiteQuality
SIO_000300: 2.821835e6

QD
type: SiteQuality
SIO_000300: 1.563e1

VQSLOD
type: SiteQuality
SIO_000300: 7.73e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.21e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.66e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.975e1

GenotypeQuality
all individuals: 225
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8660
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1951
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3578
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33071
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 3478
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.659969088098918e-5
allele num: 10352
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.157675387821255e-4
allele num: 8638
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66546
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11534
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16484
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.11e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -3.58e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.34e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 1.7e0

QD
type: SiteQuality
SIO_000300: 1.33e1

DP
type: SiteQuality
SIO_000300: 2.82138e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.81e0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3741
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3744
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1948
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1968
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10334
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.503397678753984e-5
allele num: 66516
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11534
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16452
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.01e0

MQRankSum
type: SiteQuality
SIO_000300: 1.12e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.99e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.83e-1

FS
type: SiteQuality
SIO_000300: 9.0e-1

DP
type: SiteQuality
SIO_000300: 2.82031e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

QD
type: SiteQuality
SIO_000300: 1.201e1

VQSLOD
type: SiteQuality
SIO_000300: 6.909999999999999e-1

MQ
type: SiteQuality
SIO_000300: 5.951e1

GenotypeQuality
all individuals: 14
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3744
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3742
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 94
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 114
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3577
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 5.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10334
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11534
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16448
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66506
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.511944360447536e-4
allele num: 6614
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -2.8e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.0e-1

FS
type: SiteQuality
SIO_000300: 1.0078e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.946e1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.57e0

QD
type: SiteQuality
SIO_000300: 1.694e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.21e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.233e0

DP
type: SiteQuality
SIO_000300: 2.819462e6

GenotypeQuality
all individuals: 22
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 355
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3742
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33067
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1939
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 94
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1968
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3726
bin: 6.75e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.157943492357573e-4
allele num: 8636
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10332
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66484
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11530
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16432
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

QD
type: SiteQuality
SIO_000300: 1.243e1

MQ
type: SiteQuality
SIO_000300: 5.978e1

FS
type: SiteQuality
SIO_000300: 6.802e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.59e0

VQSLOD
type: SiteQuality
SIO_000300: 7.32e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.06e0

DP
type: SiteQuality
SIO_000300: 2.817545e6

MQRankSum
type: SiteQuality
SIO_000300: 6.840000000000001e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.61e0

GenotypeQuality
all individuals: 227
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 162
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1966
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8016
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3677
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3742
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11528
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66458
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.686168151879117e-5
allele num: 10324
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16402
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.814311e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.827e0

VQSLOD
type: SiteQuality
SIO_000300: 2.51e0

MQ
type: SiteQuality
SIO_000300: 5.909e1

QD
type: SiteQuality
SIO_000300: 1.338e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

FS
type: SiteQuality
SIO_000300: 2.946e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.46e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.09e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.43e-1

GenotypeQuality
all individuals: 3569
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3671
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3741
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 179
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33066
bin: 9.75e1
variant carriers: 15

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11528
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10324
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16396
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 15
allele frequency: 2.25713253882268e-4
allele num: 66456
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.449e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.72e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -1.2e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.58e0

DP
type: SiteQuality
SIO_000300: 2.813077e6

BaseQRankSum
type: SiteQuality
SIO_000300: -4.352e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.58e-1

GenotypeQuality
all individuals: 216
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1966
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3468
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1929
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3741
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66456
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16398
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.688044952528579e-5
allele num: 10322
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11526
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.557e1

DP
type: SiteQuality
SIO_000300: 2.811505e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 6.06e-1

FS
type: SiteQuality
SIO_000300: 2.068e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -5.07e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.49e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.9e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.932e0

GenotypeQuality
all individuals: 1919
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3617
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3741
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 351
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3457
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 82
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3565
bin: 8.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16388
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.010234798314269e-5
allele num: 66440
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10322
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11524
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

QD
type: SiteQuality
SIO_000300: 1.84e1

MQRankSum
type: SiteQuality
SIO_000300: -1.67e-1

VQSLOD
type: SiteQuality
SIO_000300: -6.927e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.03e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.8e0

DP
type: SiteQuality
SIO_000300: 2.80796e6

BaseQRankSum
type: SiteQuality
SIO_000300: -5.72e-1

FS
type: SiteQuality
SIO_000300: 5.561e0

GenotypeQuality
all individuals: 12
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7575
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 111
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33056
bin: 9.75e1
variant carriers: 6

GenotypeQuality
all individuals: 3453
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3610
bin: 6.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16384
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66440
num of homozygotes: 0

African
type: Population
allele count: 6
allele frequency: 5.815080441946114e-4
allele num: 10318
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11522
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 8.26e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.2e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.36e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.7e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.613e1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 9.73e-1

DP
type: SiteQuality
SIO_000300: 2.807579e6

GenotypeQuality
all individuals: 29
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3395
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1872
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3485
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 538
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3534
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33035
bin: 9.75e1
variant carriers: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11516
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66362
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16346
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.693679720822024e-5
allele num: 10316
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.798678e6

FS
type: SiteQuality
SIO_000300: 2.32e0

MQ
type: SiteQuality
SIO_000300: 5.395e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.271e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.4e-3

VQSLOD
type: SiteQuality
SIO_000300: -2.423e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.735e0

MQRankSum
type: SiteQuality
SIO_000300: -1.735e0

QD
type: SiteQuality
SIO_000300: 5.81e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.12e-1

GenotypeQuality
all individuals: 7080
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1730
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 413
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9200
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 757
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 982
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 11287
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 470
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 2511
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 289
bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 710
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5404
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5924
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 48272
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8618
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7536
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 8.706251088281386e-5
allele num: 11486
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.763e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.1e-3

DP
type: SiteQuality
SIO_000300: 8.9371e5

MQRankSum
type: SiteQuality
SIO_000300: -1.664e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.664e0

VQSLOD
type: SiteQuality
SIO_000300: -1.234e0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.55e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.7e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 109
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 645
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13753
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 647
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 922
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 14715
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 472
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 795
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 489
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1906
bin: 4.75e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 8.730574471800244e-5
allele num: 11454
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 2.332633543270352e-4
allele num: 8574
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 48276
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5394
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5924
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7558
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 714
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.349e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.075e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.1e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.55e-1

DP
type: SiteQuality
SIO_000300: 9.23236e5

VQSLOD
type: SiteQuality
SIO_000300: 1.08e0

MQRankSum
type: SiteQuality
SIO_000300: -9.29e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.96e-1

GenotypeQuality
all individuals: 556
bin: 7.75e1
variant carriers: 10

GenotypeQuality
all individuals: 8151
bin: 3.25e1
variant carriers: 3

GenotypeQuality
all individuals: 15587
bin: 6.25e1
variant carriers: 4

GenotypeQuality
all individuals: 508
bin: 7.25e1
variant carriers: 7

GenotypeQuality
all individuals: 5626
bin: 3.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1546
bin: 9.75e1
variant carriers: 852

GenotypeQuality
all individuals: 323
bin: 8.25e1
variant carriers: 15

GenotypeQuality
all individuals: 329
bin: 5.75e1
variant carriers: 5

GenotypeQuality
all individuals: 494
bin: 1.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1735
bin: 4.25e1
variant carriers: 6

South Asian
type: Population
allele count: 33
allele frequency: 2.830188679245283e-3
allele num: 11660
num of homozygotes: 1

Latino
type: Population
allele count: 44
allele frequency: 5.060961582700713e-3
allele num: 8694
num of homozygotes: 0

African
type: Population
allele count: 12
allele frequency: 1.572327044025157e-3
allele num: 7632
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 654
allele frequency: 1.3378063249192e-2
allele num: 48886
num of homozygotes: 8

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6000
num of homozygotes: 0

Other
type: Population
allele count: 8
allele frequency: 1.104972375690608e-2
allele num: 724
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 161
allele frequency: 2.953044754218635e-2
allele num: 5452
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.24e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.05e-2

MQRankSum
type: SiteQuality
SIO_000300: 1.58e-1

QD
type: SiteQuality
SIO_000300: 1.392e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.37e-1

FS
type: SiteQuality
SIO_000300: 1.508e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.0e-1

DP
type: SiteQuality
SIO_000300: 9.47377e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 4.56e0

GenotypeQuality
all individuals: 592
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 667
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 242
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14152
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4468
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1169
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2500
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 174
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 124
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 623
bin: 5.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 7.920478396895172e-5
allele num: 50502
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12076
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6222
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9012
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7810
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.804402742692169e-4
allele num: 5542
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 746
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.010202e6

MQRankSum
type: SiteQuality
SIO_000300: 7.96e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.3e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -1.672e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.28e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.21e-1

QD
type: SiteQuality
SIO_000300: 1.209e1

FS
type: SiteQuality
SIO_000300: 5.286e0

VQSLOD
type: SiteQuality
SIO_000300: 6.21e-1

GenotypeQuality
all individuals: 362
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 611
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 348
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23175
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 236
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 758
bin: 9.75e1
variant carriers: 44

GenotypeQuality
all individuals: 1054
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 987
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 679
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 125
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 50708
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6258
num of homozygotes: 0

African
type: Population
allele count: 43
allele frequency: 5.463786531130877e-3
allele num: 7870
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12180
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9060
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 752
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5564
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.533e0

VQSLOD
type: SiteQuality
SIO_000300: 4.7e0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.2e-2

DP
type: SiteQuality
SIO_000300: 1.023914e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.6e-3

MQRankSum
type: SiteQuality
SIO_000300: 1.2e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.253e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.6e-2

GenotypeQuality
all individuals: 116
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3605
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1839
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 183
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 784
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 562
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 730
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 400
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32333
bin: 6.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9740
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5782
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 54054
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 772
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8328
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.480604086467279e-4
allele num: 6754
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12962
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 2.72e-1

DP
type: SiteQuality
SIO_000300: 1.135568e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.81e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 3.04e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.26e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.3e-3

QD
type: SiteQuality
SIO_000300: 1.608e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.81e-1

GenotypeQuality
all individuals: 62
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10786
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 156
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 92
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33661
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 824
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1595
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 482
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 190
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 768
bin: 7.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 782
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5850
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8468
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 54866
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6894
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9892
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.576905591756326e-5
allele num: 13198
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -3.022e-1

MQRankSum
type: SiteQuality
SIO_000300: 9.49e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.1e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.76e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.98e-1

QD
type: SiteQuality
SIO_000300: 1.652e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.1e-3

DP
type: SiteQuality
SIO_000300: 1.157575e6

FS
type: SiteQuality
SIO_000300: 5.814e0

MQ
type: SiteQuality
SIO_000300: 5.922e1

GenotypeQuality
all individuals: 748
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3479
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 102
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 35791
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 791
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 871
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1278
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 426
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 192
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 2
allele frequency: 1.96347928529354e-4
allele num: 10186
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7114
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5968
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 798
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13630
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8696
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.55088417015837e-5
allele num: 56324
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -2.491e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.9e-2

DP
type: SiteQuality
SIO_000300: 1.197023e6

QD
type: SiteQuality
SIO_000300: 1.024e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.46e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.54e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.06e-1

FS
type: SiteQuality
SIO_000300: 3.206e0

GenotypeQuality
all individuals: 164
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1140
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 151
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 823
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 116
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 538
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1179
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 137
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 208
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 169
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 247
bin: 4.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8604
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6586
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10272
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16356
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11474
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.520727516043675e-5
allele num: 65758
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.15e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.612e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

FS
type: SiteQuality
SIO_000300: 8.855e0

QD
type: SiteQuality
SIO_000300: 1.104e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.626e0

VQSLOD
type: SiteQuality
SIO_000300: -1.122e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.42e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.423754e6

GenotypeQuality
all individuals: 1138
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5161
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 131
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 165
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 119
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 537
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1201
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 207
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 152
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 769
bin: 9.75e1
variant carriers: 39

East Asian
type: Population
allele count: 37
allele frequency: 4.290352504638219e-3
allele num: 8624
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10328
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.116071428571429e-3
allele num: 896
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66098
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.685079034219212e-5
allele num: 11514
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16406
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.8e-2

VQSLOD
type: SiteQuality
SIO_000300: 3.99e0

FS
type: SiteQuality
SIO_000300: 1.158e0

MQ
type: SiteQuality
SIO_000300: 5.964e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.06e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.2e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.29e-1

DP
type: SiteQuality
SIO_000300: 1.434566e6

BaseQRankSum
type: SiteQuality
SIO_000300: -8.66e-1

QD
type: SiteQuality
SIO_000300: 1.199e1

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 49939
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1201
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 100
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 152
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 532
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 165
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1138
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5161
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 177
bin: 4.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10328
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11514
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.219066195294405e-4
allele num: 16406
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66098
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.8e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.2e-1

QD
type: SiteQuality
SIO_000300: 1.199e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.06e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -8.66e-1

FS
type: SiteQuality
SIO_000300: 1.158e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.29e-1

MQ
type: SiteQuality
SIO_000300: 5.964e1

DP
type: SiteQuality
SIO_000300: 1.434566e6

VQSLOD
type: SiteQuality
SIO_000300: 3.99e0

GenotypeQuality
all individuals: 116
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 110
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50140
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 546
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 102
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 101
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 210
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 737
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 5192
bin: 6.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16422
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11514
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8630
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.511304558094547e-5
allele num: 66168
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10336
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.49e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.64e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 4.4e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.425e1

FS
type: SiteQuality
SIO_000300: 6.2e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.92e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.0e-1

DP
type: SiteQuality
SIO_000300: 1.434577e6

GenotypeQuality
all individuals: 5192
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 210
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 102
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 195
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 97
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 110
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 116
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 546
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 169
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1202
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10336
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66168
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11514
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.089392278650591e-5
allele num: 16422
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8630
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.49e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.64e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.4e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

FS
type: SiteQuality
SIO_000300: 6.2e-1

DP
type: SiteQuality
SIO_000300: 1.434577e6

BaseQRankSum
type: SiteQuality
SIO_000300: 2.92e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.0e-1

QD
type: SiteQuality
SIO_000300: 1.425e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 208
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5207
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 168
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1199
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 92
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 429
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 738
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 80
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 136
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 208
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.157943492357573e-4
allele num: 8636
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10342
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16430
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11524
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.019414837404511e-5
allele num: 66238
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.38e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.85e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

FS
type: SiteQuality
SIO_000300: 2.591e0

QD
type: SiteQuality
SIO_000300: 1.175e1

DP
type: SiteQuality
SIO_000300: 1.436451e6

VQSLOD
type: SiteQuality
SIO_000300: 2.37e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.065e0

MQ
type: SiteQuality
SIO_000300: 5.968e1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.5e-2

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 85
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 737
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 209
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1142
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 104
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 125
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 171
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 153
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 538
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 392
bin: 2.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11526
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10354
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.508568670045861e-5
allele num: 66288
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16436
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.03e0

FS
type: SiteQuality
SIO_000300: 2.721e0

MQ
type: SiteQuality
SIO_000300: 5.948e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.24e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.79e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.2e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

DP
type: SiteQuality
SIO_000300: 1.437386e6

QD
type: SiteQuality
SIO_000300: 1.449e1

MQRankSum
type: SiteQuality
SIO_000300: 3.65e-1

GenotypeQuality
all individuals: 738
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 50998
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 212
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1154
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 125
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5273
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1214
bin: 7.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66584
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10382
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.653513326410523e-5
allele num: 11556
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.31107002542177e-4
allele num: 8654
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.04e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.24e-1

DP
type: SiteQuality
SIO_000300: 1.445423e6

MQRankSum
type: SiteQuality
SIO_000300: -4.2e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

QD
type: SiteQuality
SIO_000300: 1.581e1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.56e-1

FS
type: SiteQuality
SIO_000300: 6.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.26e-1

GenotypeQuality
all individuals: 89
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 168
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 51091
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5296
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 736
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 541
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1158
bin: 7.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10390
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500870504892838e-5
allele num: 66628
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.934e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.74e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.519e0

QD
type: SiteQuality
SIO_000300: 1.169e1

MQ
type: SiteQuality
SIO_000300: 5.887e1

DP
type: SiteQuality
SIO_000300: 1.446468e6

MQRankSum
type: SiteQuality
SIO_000300: 8.2e-2

FS
type: SiteQuality
SIO_000300: 1.1021e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -3.109e0

GenotypeQuality
all individuals: 13
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1210
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5311
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1158
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 51195
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 211
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.499370088187654e-5
allele num: 66676
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10396
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.55e0

MQRankSum
type: SiteQuality
SIO_000300: 5.0e-2

VQSLOD
type: SiteQuality
SIO_000300: 5.2e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

DP
type: SiteQuality
SIO_000300: 1.447438e6

FS
type: SiteQuality
SIO_000300: 2.537e0

QD
type: SiteQuality
SIO_000300: 1.579e1

MQ
type: SiteQuality
SIO_000300: 5.965e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.89e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 9.0e-1

GenotypeQuality
all individuals: 51191
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5321
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 736
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 16
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1155
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 168
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 5.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499520153550864e-5
allele num: 66688
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.51e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.24e0

QD
type: SiteQuality
SIO_000300: 1.463e1

FS
type: SiteQuality
SIO_000300: 2.66e0

MQRankSum
type: SiteQuality
SIO_000300: -1.93e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.43e-1

DP
type: SiteQuality
SIO_000300: 1.448045e6

MQ
type: SiteQuality
SIO_000300: 5.959e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.078e0

GenotypeQuality
all individuals: 169
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1209
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 737
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 14
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 212
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66684
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10392
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.646031471554557e-5
allele num: 11566
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.08e0

VQSLOD
type: SiteQuality
SIO_000300: -8.105e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.8e-1

QD
type: SiteQuality
SIO_000300: 8.050000000000001e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 1.63e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.9e-2

DP
type: SiteQuality
SIO_000300: 1.44796e6

MQ
type: SiteQuality
SIO_000300: 5.957e1

GenotypeQuality
all individuals: 23
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5305
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 211
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 88
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 746
bin: 9.75e1
variant carriers: 12

GenotypeQuality
all individuals: 51159
bin: 6.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.628345850182938e-5
allele num: 10386
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 10
allele frequency: 1.499925003749812e-4
allele num: 66670
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.51285930408472e-4
allele num: 6610
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.44e0

MQ
type: SiteQuality
SIO_000300: 5.976e1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 2.07e0

DP
type: SiteQuality
SIO_000300: 1.44829e6

QD
type: SiteQuality
SIO_000300: 1.199e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.169e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 4.88e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.51e0

GenotypeQuality
all individuals: 19
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 212
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 738
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 5303
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1152
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 170
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 2.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10386
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.5001500150015e-5
allele num: 66660
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056935190793458e-5
allele num: 16510
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.447538e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -6.1e-2

MQRankSum
type: SiteQuality
SIO_000300: 5.0e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 1.03e0

MQ
type: SiteQuality
SIO_000300: 5.969e1

FS
type: SiteQuality
SIO_000300: 5.25e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.6e-2

QD
type: SiteQuality
SIO_000300: 1.126e1

VQSLOD
type: SiteQuality
SIO_000300: 1.17e0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 51133
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 737
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 24
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1149
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 530
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66648
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10384
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056935190793458e-5
allele num: 16510
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.12e-1

MQ
type: SiteQuality
SIO_000300: 5.9e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -1.73e-1

DP
type: SiteQuality
SIO_000300: 1.44718e6

VQSLOD
type: SiteQuality
SIO_000300: -1.015e-1

FS
type: SiteQuality
SIO_000300: 4.543e0

QD
type: SiteQuality
SIO_000300: 1.133e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.593e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.27e-1

GenotypeQuality
all individuals: 32
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 212
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 128
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5301
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 738
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 170
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 51113
bin: 6.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66638
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10384
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.312673450508788e-4
allele num: 8648
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.05e0

VQSLOD
type: SiteQuality
SIO_000300: -1.592e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

FS
type: SiteQuality
SIO_000300: 1.601e0

MQRankSum
type: SiteQuality
SIO_000300: 7.1e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.1e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 1.55e0

QD
type: SiteQuality
SIO_000300: 5.05e0

DP
type: SiteQuality
SIO_000300: 1.446848e6

GenotypeQuality
all individuals: 155
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 51016
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 170
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 737
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 525
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1201
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5278
bin: 6.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10376
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66612
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.650519031141868e-5
allele num: 11560
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.446465e6

QD
type: SiteQuality
SIO_000300: 5.39e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -1.293e0

MQ
type: SiteQuality
SIO_000300: 5.885e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.59e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.867e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.688e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.53e0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 157
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5285
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 51073
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1136
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 170
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10376
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.501321162623108e-5
allele num: 66608
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 1.01e0

QD
type: SiteQuality
SIO_000300: 1.467e1

VQSLOD
type: SiteQuality
SIO_000300: 1.83e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.628e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.18e-1

DP
type: SiteQuality
SIO_000300: 1.44623e6

FS
type: SiteQuality
SIO_000300: 3.91e0

MQ
type: SiteQuality
SIO_000300: 6.076e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.15e0

GenotypeQuality
all individuals: 17
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1199
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 51030
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 209
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 524
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 211
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 737
bin: 9.75e1
variant carriers: 2

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10364
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.653513326410523e-5
allele num: 11556
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66560
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.05913717886573e-5
allele num: 16504
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.68e0

MQRankSum
type: SiteQuality
SIO_000300: -2.48e-1

DP
type: SiteQuality
SIO_000300: 1.445321e6

FS
type: SiteQuality
SIO_000300: 3.573e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.663e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.48e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.909999999999999e-1

QD
type: SiteQuality
SIO_000300: 1.137e1

GenotypeQuality
all individuals: 522
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 746
bin: 9.75e1
variant carriers: 10

GenotypeQuality
all individuals: 50976
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5250
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 211
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 3.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10360
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.507888805409467e-5
allele num: 66550
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 7
allele frequency: 4.241396025206011e-4
allele num: 16504
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.43e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.8e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.954e1

FS
type: SiteQuality
SIO_000300: 5.76e-1

DP
type: SiteQuality
SIO_000300: 1.445599e6

MQRankSum
type: SiteQuality
SIO_000300: 4.06e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -8.129999999999999e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.54e-1

QD
type: SiteQuality
SIO_000300: 1.352e1

GenotypeQuality
all individuals: 51035
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 223
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5258
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1127
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 520
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 170
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10360
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.05913717886573e-5
allele num: 16504
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66546
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.08e0

VQSLOD
type: SiteQuality
SIO_000300: 8.74e-1

FS
type: SiteQuality
SIO_000300: 5.132e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.48e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.708e0

MQRankSum
type: SiteQuality
SIO_000300: -5.03e-1

MQ
type: SiteQuality
SIO_000300: 5.98e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

DP
type: SiteQuality
SIO_000300: 1.445019e6

QD
type: SiteQuality
SIO_000300: 1.318e1

GenotypeQuality
all individuals: 5254
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 170
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1125
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 242
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 51021
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1191
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 737
bin: 9.75e1
variant carriers: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10356
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.503036132988637e-5
allele num: 66532
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.438e-1

QD
type: SiteQuality
SIO_000300: 1.331e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -7.49e-1

MQ
type: SiteQuality
SIO_000300: 5.89e1

MQRankSum
type: SiteQuality
SIO_000300: 1.12e0

DP
type: SiteQuality
SIO_000300: 1.444384e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.63e0

FS
type: SiteQuality
SIO_000300: 8.68e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.64e-1

GenotypeQuality
all individuals: 50928
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 517
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1188
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 736
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 170
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 2.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10352
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16496
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66488
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.653513326410523e-5
allele num: 11556
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -2.74e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.68e-1

QD
type: SiteQuality
SIO_000300: 1.387e1

FS
type: SiteQuality
SIO_000300: 3.476e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 8.47e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.27e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.92e-1

DP
type: SiteQuality
SIO_000300: 1.443269e6

GenotypeQuality
all individuals: 16
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5237
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50887
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1113
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1187
bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11554
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16496
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10348
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.009238361770636e-5
allele num: 66462
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.98e-1

FS
type: SiteQuality
SIO_000300: 5.558e0

QD
type: SiteQuality
SIO_000300: 1.276e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 3.13e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.71e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.3e0

DP
type: SiteQuality
SIO_000300: 1.442443e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.27e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

GenotypeQuality
all individuals: 6
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 518
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 81
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 209
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50836
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1113
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1188
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10344
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.157139551029854e-4
allele num: 8642
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66440
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16492
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11554
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.362e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.9e0

MQRankSum
type: SiteQuality
SIO_000300: 1.83e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

DP
type: SiteQuality
SIO_000300: 1.441969e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.15e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -3.238e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.35e-1

MQ
type: SiteQuality
SIO_000300: 5.941e1

GenotypeQuality
all individuals: 440
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 514
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 209
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5219
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50684
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1173
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 163
bin: 8.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.506296318611797e-5
allele num: 66388
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10320
num of homozygotes: 0

East Asian
type: Population
allele count: 3
allele frequency: 3.473026163463765e-4
allele num: 8638
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16486
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.655011251514626e-5
allele num: 11554
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.44e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.45e-1

DP
type: SiteQuality
SIO_000300: 1.440649e6

ClippingRankSum
type: SiteQuality
SIO_000300: -8.2e-2

MQ
type: SiteQuality
SIO_000300: 5.971e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.692e0

MQRankSum
type: SiteQuality
SIO_000300: 6.61e-1

QD
type: SiteQuality
SIO_000300: 9.369999999999999e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.2e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

GenotypeQuality
all individuals: 5
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 734
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 5202
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 527
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50596
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 206
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 515
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 89
bin: 2.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16474
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10306
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.315886984715146e-4
allele num: 8636
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66340
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.01e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.53e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.15e-1

FS
type: SiteQuality
SIO_000300: 3.118e0

MQRankSum
type: SiteQuality
SIO_000300: 7.97e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.805e0

MQ
type: SiteQuality
SIO_000300: 5.962e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

QD
type: SiteQuality
SIO_000300: 1.164e1

DP
type: SiteQuality
SIO_000300: 1.439048e6

GenotypeQuality
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 50354
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 196
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 128
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 158
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1081
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1094
bin: 9.75e1
variant carriers: 385

Other
type: Population
allele count: 1
allele frequency: 1.108647450110865e-3
allele num: 902
num of homozygotes: 0

East Asian
type: Population
allele count: 12
allele frequency: 1.389210465385506e-3
allele num: 8638
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 6
allele frequency: 9.090909090909091e-4
allele num: 6600
num of homozygotes: 0

South Asian
type: Population
allele count: 14
allele frequency: 8.499271491015056e-4
allele num: 16472
num of homozygotes: 0

Latino
type: Population
allele count: 58
allele frequency: 5.023384721981639e-3
allele num: 11546
num of homozygotes: 1

African
type: Population
allele count: 6
allele frequency: 5.822981366459627e-4
allele num: 10304
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 290
allele frequency: 4.372474519027803e-3
allele num: 66324
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.9e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 3.02e0

FS
type: SiteQuality
SIO_000300: 1.918e0

QD
type: SiteQuality
SIO_000300: 1.326e1

DP
type: SiteQuality
SIO_000300: 1.451605e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.9e-3

MQ
type: SiteQuality
SIO_000300: 5.978e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.05e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.58e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.27e0

GenotypeQuality
all individuals: 5
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 104
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 512
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5240
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 728
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1098
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11544
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66302
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16464
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.706853038245001e-5
allele num: 10302
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 4.5e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.58e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.52e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.96e0

MQRankSum
type: SiteQuality
SIO_000300: 6.15e-1

MQ
type: SiteQuality
SIO_000300: 5.965e1

DP
type: SiteQuality
SIO_000300: 1.439124e6

QD
type: SiteQuality
SIO_000300: 1.078e1