22-20020752-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20020752
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 20020752
    reference: chr 22
allele count: 14
allele frequency: 1.177539279345961e-4
allele num: 118892
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000475446
  gene symbol: TANGO2
  hgvsc: ENST00000475446.1:n.163-3531G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000471707
  gene symbol: TANGO2
  hgvsc: ENST00000471707.1:n.180-3531G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000403432
  ensembl transcript: ENST00000430807
  gene symbol: TANGO2
  hgvsc: ENST00000430807.1:c.-39-3531G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000382706
  ensembl transcript: ENST00000399807
  gene symbol: TANGO2
  hgvsc: ENST00000399807.3:c.-156-3531G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000381122
  ensembl transcript: ENST00000398042
  gene symbol: TANGO2
  hgvsc: ENST00000398042.2:c.-39-3531G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000385662
  ensembl transcript: ENST00000401886
  gene symbol: TANGO2
  hgvsc: ENST00000401886.1:c.-39-3531G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000479679
  gene symbol: TANGO2
  hgvsc: ENST00000479679.1:n.126-3531G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000402926
  ensembl transcript: ENST00000432883
  gene symbol: TANGO2
  hgvsc: ENST00000432883.1:c.-39-3531G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000402966
  ensembl transcript: ENST00000450019
  gene symbol: TANGO2
  hgvsc: ENST00000450019.1:c.-39-3531G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000384827
  ensembl transcript: ENST00000401833
  gene symbol: TANGO2
  hgvsc: ENST00000401833.1:c.-156-3531G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000411907
  gene symbol: TANGO2
  hgvsc: ENST00000411907.1:n.67-3531G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000415450
  ensembl transcript: ENST00000450664
  gene symbol: TANGO2
  hgvsc: ENST00000450664.1:c.-39-3531G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000411602
  ensembl transcript: ENST00000434168
  gene symbol: TANGO2
  hgvsc: ENST00000434168.1:c.-39-3531G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000389797
  ensembl transcript: ENST00000447208
  gene symbol: TANGO2
  hgvsc: ENST00000447208.2:c.-39-3531G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000332721
  ensembl transcript: ENST00000327374
  gene symbol: TANGO2
  hgvsc: ENST00000327374.4:c.-39-3531G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000413850
  ensembl transcript: ENST00000432198
  gene symbol: TANGO2
  hgvsc: ENST00000432198.1:c.-39-3531G>A
  variant of: http://identifiers.org/hgnc/25439
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 23133
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 888
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12408
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 520
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: Other
population: European (Finnish)
population: Latino
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD

22-20020755-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20020755
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 20020755
    reference: chr 22
allele count: 1
allele frequency: 8.419492809753141e-6
allele num: 118772
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000385662
  ensembl transcript: ENST00000401886
  gene symbol: TANGO2
  hgvsc: ENST00000401886.1:c.-39-3528T>C
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000479679
  gene symbol: TANGO2
  hgvsc: ENST00000479679.1:n.126-3528T>C
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000402926
  ensembl transcript: ENST00000432883
  gene symbol: TANGO2
  hgvsc: ENST00000432883.1:c.-39-3528T>C
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000411907
  gene symbol: TANGO2
  hgvsc: ENST00000411907.1:n.67-3528T>C
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000413850
  ensembl transcript: ENST00000432198
  gene symbol: TANGO2
  hgvsc: ENST00000432198.1:c.-39-3528T>C
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000381122
  ensembl transcript: ENST00000398042
  gene symbol: TANGO2
  hgvsc: ENST00000398042.2:c.-39-3528T>C
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000475446
  gene symbol: TANGO2
  hgvsc: ENST00000475446.1:n.163-3528T>C
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000384827
  ensembl transcript: ENST00000401833
  gene symbol: TANGO2
  hgvsc: ENST00000401833.1:c.-156-3528T>C
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000471707
  gene symbol: TANGO2
  hgvsc: ENST00000471707.1:n.180-3528T>C
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000382706
  ensembl transcript: ENST00000399807
  gene symbol: TANGO2
  hgvsc: ENST00000399807.3:c.-156-3528T>C
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000402966
  ensembl transcript: ENST00000450019
  gene symbol: TANGO2
  hgvsc: ENST00000450019.1:c.-39-3528T>C
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000415450
  ensembl transcript: ENST00000450664
  gene symbol: TANGO2
  hgvsc: ENST00000450664.1:c.-39-3528T>C
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000389797
  ensembl transcript: ENST00000447208
  gene symbol: TANGO2
  hgvsc: ENST00000447208.2:c.-39-3528T>C
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000403432
  ensembl transcript: ENST00000430807
  gene symbol: TANGO2
  hgvsc: ENST00000430807.1:c.-39-3528T>C
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000332721
  ensembl transcript: ENST00000327374
  gene symbol: TANGO2
  hgvsc: ENST00000327374.4:c.-39-3528T>C
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000411602
  ensembl transcript: ENST00000434168
  gene symbol: TANGO2
  hgvsc: ENST00000434168.1:c.-39-3528T>C
  variant of: http://identifiers.org/hgnc/25439
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2066
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12351
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22919
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4724
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 647
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
reference allele: T
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: DP

22-20020757-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20020757
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 20020757
    reference: chr 22
allele count: 9
allele frequency: 7.582523126695536e-5
allele num: 118694
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000402966
  ensembl transcript: ENST00000450019
  gene symbol: TANGO2
  hgvsc: ENST00000450019.1:c.-39-3526C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000381122
  ensembl transcript: ENST00000398042
  gene symbol: TANGO2
  hgvsc: ENST00000398042.2:c.-39-3526C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000413850
  ensembl transcript: ENST00000432198
  gene symbol: TANGO2
  hgvsc: ENST00000432198.1:c.-39-3526C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000382706
  ensembl transcript: ENST00000399807
  gene symbol: TANGO2
  hgvsc: ENST00000399807.3:c.-156-3526C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000479679
  gene symbol: TANGO2
  hgvsc: ENST00000479679.1:n.126-3526C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000389797
  ensembl transcript: ENST00000447208
  gene symbol: TANGO2
  hgvsc: ENST00000447208.2:c.-39-3526C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000411907
  gene symbol: TANGO2
  hgvsc: ENST00000411907.1:n.67-3526C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000385662
  ensembl transcript: ENST00000401886
  gene symbol: TANGO2
  hgvsc: ENST00000401886.1:c.-39-3526C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000384827
  ensembl transcript: ENST00000401833
  gene symbol: TANGO2
  hgvsc: ENST00000401833.1:c.-156-3526C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000403432
  ensembl transcript: ENST00000430807
  gene symbol: TANGO2
  hgvsc: ENST00000430807.1:c.-39-3526C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000415450
  ensembl transcript: ENST00000450664
  gene symbol: TANGO2
  hgvsc: ENST00000450664.1:c.-39-3526C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000332721
  ensembl transcript: ENST00000327374
  gene symbol: TANGO2
  hgvsc: ENST00000327374.4:c.-39-3526C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000411602
  ensembl transcript: ENST00000434168
  gene symbol: TANGO2
  hgvsc: ENST00000434168.1:c.-39-3526C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000475446
  gene symbol: TANGO2
  hgvsc: ENST00000475446.1:n.163-3526C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000402926
  ensembl transcript: ENST00000432883
  gene symbol: TANGO2
  hgvsc: ENST00000432883.1:c.-39-3526C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000471707
  gene symbol: TANGO2
  hgvsc: ENST00000471707.1:n.180-3526C>T
  variant of: http://identifiers.org/hgnc/25439
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12618
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 758
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22769
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2048
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 971
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: Other
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP

22-20020758-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20020758
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 20020758
    reference: chr 22
allele count: 2
allele frequency: 1.685658418178141e-5
allele num: 118648
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000471707
  gene symbol: TANGO2
  hgvsc: ENST00000471707.1:n.180-3525G>C
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000389797
  ensembl transcript: ENST00000447208
  gene symbol: TANGO2
  hgvsc: ENST00000447208.2:c.-39-3525G>C
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000411602
  ensembl transcript: ENST00000434168
  gene symbol: TANGO2
  hgvsc: ENST00000434168.1:c.-39-3525G>C
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000381122
  ensembl transcript: ENST00000398042
  gene symbol: TANGO2
  hgvsc: ENST00000398042.2:c.-39-3525G>C
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000475446
  gene symbol: TANGO2
  hgvsc: ENST00000475446.1:n.163-3525G>C
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000402966
  ensembl transcript: ENST00000450019
  gene symbol: TANGO2
  hgvsc: ENST00000450019.1:c.-39-3525G>C
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000479679
  gene symbol: TANGO2
  hgvsc: ENST00000479679.1:n.126-3525G>C
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000385662
  ensembl transcript: ENST00000401886
  gene symbol: TANGO2
  hgvsc: ENST00000401886.1:c.-39-3525G>C
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000402926
  ensembl transcript: ENST00000432883
  gene symbol: TANGO2
  hgvsc: ENST00000432883.1:c.-39-3525G>C
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000384827
  ensembl transcript: ENST00000401833
  gene symbol: TANGO2
  hgvsc: ENST00000401833.1:c.-156-3525G>C
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000413850
  ensembl transcript: ENST00000432198
  gene symbol: TANGO2
  hgvsc: ENST00000432198.1:c.-39-3525G>C
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000415450
  ensembl transcript: ENST00000450664
  gene symbol: TANGO2
  hgvsc: ENST00000450664.1:c.-39-3525G>C
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000382706
  ensembl transcript: ENST00000399807
  gene symbol: TANGO2
  hgvsc: ENST00000399807.3:c.-156-3525G>C
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000403432
  ensembl transcript: ENST00000430807
  gene symbol: TANGO2
  hgvsc: ENST00000430807.1:c.-39-3525G>C
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000332721
  ensembl transcript: ENST00000327374
  gene symbol: TANGO2
  hgvsc: ENST00000327374.4:c.-39-3525G>C
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000411907
  gene symbol: TANGO2
  hgvsc: ENST00000411907.1:n.67-3525G>C
  variant of: http://identifiers.org/hgnc/25439
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 818
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 987
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2062
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: European (Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD

22-20020760-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20020760
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 20020760
    reference: chr 22
allele count: 2
allele frequency: 1.686881125487087e-5
allele num: 118562
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000475446
  gene symbol: TANGO2
  hgvsc: ENST00000475446.1:n.163-3523C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000332721
  ensembl transcript: ENST00000327374
  gene symbol: TANGO2
  hgvsc: ENST00000327374.4:c.-39-3523C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000479679
  gene symbol: TANGO2
  hgvsc: ENST00000479679.1:n.126-3523C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000411602
  ensembl transcript: ENST00000434168
  gene symbol: TANGO2
  hgvsc: ENST00000434168.1:c.-39-3523C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000381122
  ensembl transcript: ENST00000398042
  gene symbol: TANGO2
  hgvsc: ENST00000398042.2:c.-39-3523C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000385662
  ensembl transcript: ENST00000401886
  gene symbol: TANGO2
  hgvsc: ENST00000401886.1:c.-39-3523C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000471707
  gene symbol: TANGO2
  hgvsc: ENST00000471707.1:n.180-3523C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000415450
  ensembl transcript: ENST00000450664
  gene symbol: TANGO2
  hgvsc: ENST00000450664.1:c.-39-3523C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000411907
  gene symbol: TANGO2
  hgvsc: ENST00000411907.1:n.67-3523C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000384827
  ensembl transcript: ENST00000401833
  gene symbol: TANGO2
  hgvsc: ENST00000401833.1:c.-156-3523C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000382706
  ensembl transcript: ENST00000399807
  gene symbol: TANGO2
  hgvsc: ENST00000399807.3:c.-156-3523C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000389797
  ensembl transcript: ENST00000447208
  gene symbol: TANGO2
  hgvsc: ENST00000447208.2:c.-39-3523C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000413850
  ensembl transcript: ENST00000432198
  gene symbol: TANGO2
  hgvsc: ENST00000432198.1:c.-39-3523C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000402966
  ensembl transcript: ENST00000450019
  gene symbol: TANGO2
  hgvsc: ENST00000450019.1:c.-39-3523C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000403432
  ensembl transcript: ENST00000430807
  gene symbol: TANGO2
  hgvsc: ENST00000430807.1:c.-39-3523C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000402926
  ensembl transcript: ENST00000432883
  gene symbol: TANGO2
  hgvsc: ENST00000432883.1:c.-39-3523C>T
  variant of: http://identifiers.org/hgnc/25439
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1025
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 939
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 22465
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12364
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 974
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: African
population: Other
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: East Asian
reference allele: C
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: QD

22-20020761-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20020761
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 20020761
    reference: chr 22
allele count: 2
allele frequency: 1.687763713080169e-5
allele num: 118500
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000413850
  ensembl transcript: ENST00000432198
  gene symbol: TANGO2
  hgvsc: ENST00000432198.1:c.-39-3522G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000385662
  ensembl transcript: ENST00000401886
  gene symbol: TANGO2
  hgvsc: ENST00000401886.1:c.-39-3522G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000479679
  gene symbol: TANGO2
  hgvsc: ENST00000479679.1:n.126-3522G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000402926
  ensembl transcript: ENST00000432883
  gene symbol: TANGO2
  hgvsc: ENST00000432883.1:c.-39-3522G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000475446
  gene symbol: TANGO2
  hgvsc: ENST00000475446.1:n.163-3522G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000389797
  ensembl transcript: ENST00000447208
  gene symbol: TANGO2
  hgvsc: ENST00000447208.2:c.-39-3522G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000402966
  ensembl transcript: ENST00000450019
  gene symbol: TANGO2
  hgvsc: ENST00000450019.1:c.-39-3522G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000381122
  ensembl transcript: ENST00000398042
  gene symbol: TANGO2
  hgvsc: ENST00000398042.2:c.-39-3522G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000332721
  ensembl transcript: ENST00000327374
  gene symbol: TANGO2
  hgvsc: ENST00000327374.4:c.-39-3522G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000415450
  ensembl transcript: ENST00000450664
  gene symbol: TANGO2
  hgvsc: ENST00000450664.1:c.-39-3522G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000382706
  ensembl transcript: ENST00000399807
  gene symbol: TANGO2
  hgvsc: ENST00000399807.3:c.-156-3522G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000411602
  ensembl transcript: ENST00000434168
  gene symbol: TANGO2
  hgvsc: ENST00000434168.1:c.-39-3522G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000471707
  gene symbol: TANGO2
  hgvsc: ENST00000471707.1:n.180-3522G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000384827
  ensembl transcript: ENST00000401833
  gene symbol: TANGO2
  hgvsc: ENST00000401833.1:c.-156-3522G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000411907
  gene symbol: TANGO2
  hgvsc: ENST00000411907.1:n.67-3522G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000403432
  ensembl transcript: ENST00000430807
  gene symbol: TANGO2
  hgvsc: ENST00000430807.1:c.-39-3522G>A
  variant of: http://identifiers.org/hgnc/25439
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4628
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1045
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2486
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2049
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 931
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: European (Finnish)
population: Latino
population: East Asian
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: G
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum

22-20020761-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20020761
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 20020761
    reference: chr 22
allele count: 51
allele frequency: 4.30379746835443e-4
allele num: 118500
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000411602
  ensembl transcript: ENST00000434168
  gene symbol: TANGO2
  hgvsc: ENST00000434168.1:c.-39-3522G>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000413850
  ensembl transcript: ENST00000432198
  gene symbol: TANGO2
  hgvsc: ENST00000432198.1:c.-39-3522G>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000384827
  ensembl transcript: ENST00000401833
  gene symbol: TANGO2
  hgvsc: ENST00000401833.1:c.-156-3522G>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000479679
  gene symbol: TANGO2
  hgvsc: ENST00000479679.1:n.126-3522G>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000402966
  ensembl transcript: ENST00000450019
  gene symbol: TANGO2
  hgvsc: ENST00000450019.1:c.-39-3522G>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000389797
  ensembl transcript: ENST00000447208
  gene symbol: TANGO2
  hgvsc: ENST00000447208.2:c.-39-3522G>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000403432
  ensembl transcript: ENST00000430807
  gene symbol: TANGO2
  hgvsc: ENST00000430807.1:c.-39-3522G>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000471707
  gene symbol: TANGO2
  hgvsc: ENST00000471707.1:n.180-3522G>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000381122
  ensembl transcript: ENST00000398042
  gene symbol: TANGO2
  hgvsc: ENST00000398042.2:c.-39-3522G>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000411907
  gene symbol: TANGO2
  hgvsc: ENST00000411907.1:n.67-3522G>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000415450
  ensembl transcript: ENST00000450664
  gene symbol: TANGO2
  hgvsc: ENST00000450664.1:c.-39-3522G>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000402926
  ensembl transcript: ENST00000432883
  gene symbol: TANGO2
  hgvsc: ENST00000432883.1:c.-39-3522G>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000385662
  ensembl transcript: ENST00000401886
  gene symbol: TANGO2
  hgvsc: ENST00000401886.1:c.-39-3522G>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000475446
  gene symbol: TANGO2
  hgvsc: ENST00000475446.1:n.163-3522G>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000382706
  ensembl transcript: ENST00000399807
  gene symbol: TANGO2
  hgvsc: ENST00000399807.3:c.-156-3522G>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000332721
  ensembl transcript: ENST00000327374
  gene symbol: TANGO2
  hgvsc: ENST00000327374.4:c.-39-3522G>T
  variant of: http://identifiers.org/hgnc/25439
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 6.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 22336
  bin: 2.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2486
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4628
  bin: 3.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12395
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: African
population: Other
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ

22-20020763-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20020763
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 20020763
    reference: chr 22
allele count: 1
allele frequency: 8.442523301364311e-6
allele num: 118448
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000411907
  gene symbol: TANGO2
  hgvsc: ENST00000411907.1:n.67-3520G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000381122
  ensembl transcript: ENST00000398042
  gene symbol: TANGO2
  hgvsc: ENST00000398042.2:c.-39-3520G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000402966
  ensembl transcript: ENST00000450019
  gene symbol: TANGO2
  hgvsc: ENST00000450019.1:c.-39-3520G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000413850
  ensembl transcript: ENST00000432198
  gene symbol: TANGO2
  hgvsc: ENST00000432198.1:c.-39-3520G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000332721
  ensembl transcript: ENST00000327374
  gene symbol: TANGO2
  hgvsc: ENST00000327374.4:c.-39-3520G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000411602
  ensembl transcript: ENST00000434168
  gene symbol: TANGO2
  hgvsc: ENST00000434168.1:c.-39-3520G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000384827
  ensembl transcript: ENST00000401833
  gene symbol: TANGO2
  hgvsc: ENST00000401833.1:c.-156-3520G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000385662
  ensembl transcript: ENST00000401886
  gene symbol: TANGO2
  hgvsc: ENST00000401886.1:c.-39-3520G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000475446
  gene symbol: TANGO2
  hgvsc: ENST00000475446.1:n.163-3520G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000389797
  ensembl transcript: ENST00000447208
  gene symbol: TANGO2
  hgvsc: ENST00000447208.2:c.-39-3520G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000415450
  ensembl transcript: ENST00000450664
  gene symbol: TANGO2
  hgvsc: ENST00000450664.1:c.-39-3520G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000479679
  gene symbol: TANGO2
  hgvsc: ENST00000479679.1:n.126-3520G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000471707
  gene symbol: TANGO2
  hgvsc: ENST00000471707.1:n.180-3520G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000402926
  ensembl transcript: ENST00000432883
  gene symbol: TANGO2
  hgvsc: ENST00000432883.1:c.-39-3520G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000403432
  ensembl transcript: ENST00000430807
  gene symbol: TANGO2
  hgvsc: ENST00000430807.1:c.-39-3520G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000382706
  ensembl transcript: ENST00000399807
  gene symbol: TANGO2
  hgvsc: ENST00000399807.3:c.-156-3520G>A
  variant of: http://identifiers.org/hgnc/25439
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1061
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 438
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 923
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4619
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1239
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12150
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: South Asian
population: Latino
population: Other
reference allele: G
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum

22-20020768-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20020768
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 20020768
    reference: chr 22
allele count: 383
allele frequency: 3.239229350970077e-3
allele num: 118238
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000402926
  ensembl transcript: ENST00000432883
  gene symbol: TANGO2
  hgvsc: ENST00000432883.1:c.-39-3515C>G
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000415450
  ensembl transcript: ENST00000450664
  gene symbol: TANGO2
  hgvsc: ENST00000450664.1:c.-39-3515C>G
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000389797
  ensembl transcript: ENST00000447208
  gene symbol: TANGO2
  hgvsc: ENST00000447208.2:c.-39-3515C>G
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000411602
  ensembl transcript: ENST00000434168
  gene symbol: TANGO2
  hgvsc: ENST00000434168.1:c.-39-3515C>G
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000385662
  ensembl transcript: ENST00000401886
  gene symbol: TANGO2
  hgvsc: ENST00000401886.1:c.-39-3515C>G
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000381122
  ensembl transcript: ENST00000398042
  gene symbol: TANGO2
  hgvsc: ENST00000398042.2:c.-39-3515C>G
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000475446
  gene symbol: TANGO2
  hgvsc: ENST00000475446.1:n.163-3515C>G
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000403432
  ensembl transcript: ENST00000430807
  gene symbol: TANGO2
  hgvsc: ENST00000430807.1:c.-39-3515C>G
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000382706
  ensembl transcript: ENST00000399807
  gene symbol: TANGO2
  hgvsc: ENST00000399807.3:c.-156-3515C>G
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000413850
  ensembl transcript: ENST00000432198
  gene symbol: TANGO2
  hgvsc: ENST00000432198.1:c.-39-3515C>G
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000384827
  ensembl transcript: ENST00000401833
  gene symbol: TANGO2
  hgvsc: ENST00000401833.1:c.-156-3515C>G
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000479679
  gene symbol: TANGO2
  hgvsc: ENST00000479679.1:n.126-3515C>G
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000411907
  gene symbol: TANGO2
  hgvsc: ENST00000411907.1:n.67-3515C>G
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000471707
  gene symbol: TANGO2
  hgvsc: ENST00000471707.1:n.180-3515C>G
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000402966
  ensembl transcript: ENST00000450019
  gene symbol: TANGO2
  hgvsc: ENST00000450019.1:c.-39-3515C>G
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000332721
  ensembl transcript: ENST00000327374
  gene symbol: TANGO2
  hgvsc: ENST00000327374.4:c.-39-3515C>G
  variant of: http://identifiers.org/hgnc/25439
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 9.75e1
  variant carriers: 30
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 6.25e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 3649
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1119
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 20935
  bin: 2.75e1
  variant carriers: 40
genotype depth: GenotypeDepth
  all individuals: 4563
  bin: 3.75e1
  variant carriers: 48
genotype quality: GenotypeQuality
num of homozygotes: 9
population: European (Non-Finnish)
population: Other
population: African
population: South Asian
population: Latino
population: East Asian
population: European (Finnish)
reference allele: C
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum

22-20020770-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20020770
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 20020770
    reference: chr 22
allele count: 1
allele frequency: 8.460809530255856e-6
allele num: 118192
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000382706
  ensembl transcript: ENST00000399807
  gene symbol: TANGO2
  hgvsc: ENST00000399807.3:c.-156-3513G>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000415450
  ensembl transcript: ENST00000450664
  gene symbol: TANGO2
  hgvsc: ENST00000450664.1:c.-39-3513G>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000402966
  ensembl transcript: ENST00000450019
  gene symbol: TANGO2
  hgvsc: ENST00000450019.1:c.-39-3513G>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000413850
  ensembl transcript: ENST00000432198
  gene symbol: TANGO2
  hgvsc: ENST00000432198.1:c.-39-3513G>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000403432
  ensembl transcript: ENST00000430807
  gene symbol: TANGO2
  hgvsc: ENST00000430807.1:c.-39-3513G>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000411602
  ensembl transcript: ENST00000434168
  gene symbol: TANGO2
  hgvsc: ENST00000434168.1:c.-39-3513G>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000389797
  ensembl transcript: ENST00000447208
  gene symbol: TANGO2
  hgvsc: ENST00000447208.2:c.-39-3513G>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000471707
  gene symbol: TANGO2
  hgvsc: ENST00000471707.1:n.180-3513G>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000475446
  gene symbol: TANGO2
  hgvsc: ENST00000475446.1:n.163-3513G>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000479679
  gene symbol: TANGO2
  hgvsc: ENST00000479679.1:n.126-3513G>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000385662
  ensembl transcript: ENST00000401886
  gene symbol: TANGO2
  hgvsc: ENST00000401886.1:c.-39-3513G>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000411907
  gene symbol: TANGO2
  hgvsc: ENST00000411907.1:n.67-3513G>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000332721
  ensembl transcript: ENST00000327374
  gene symbol: TANGO2
  hgvsc: ENST00000327374.4:c.-39-3513G>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000384827
  ensembl transcript: ENST00000401833
  gene symbol: TANGO2
  hgvsc: ENST00000401833.1:c.-156-3513G>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000402926
  ensembl transcript: ENST00000432883
  gene symbol: TANGO2
  hgvsc: ENST00000432883.1:c.-39-3513G>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000381122
  ensembl transcript: ENST00000398042
  gene symbol: TANGO2
  hgvsc: ENST00000398042.2:c.-39-3513G>T
  variant of: http://identifiers.org/hgnc/25439
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 20747
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1139
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11465
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11989
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2623
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
population: Other
population: East Asian
reference allele: G
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: DP

22-20020771-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20020771
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 20020771
    reference: chr 22
allele count: 1
allele frequency: 8.460809530255856e-6
allele num: 118192
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000471707
  gene symbol: TANGO2
  hgvsc: ENST00000471707.1:n.180-3512C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000403432
  ensembl transcript: ENST00000430807
  gene symbol: TANGO2
  hgvsc: ENST00000430807.1:c.-39-3512C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000475446
  gene symbol: TANGO2
  hgvsc: ENST00000475446.1:n.163-3512C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000381122
  ensembl transcript: ENST00000398042
  gene symbol: TANGO2
  hgvsc: ENST00000398042.2:c.-39-3512C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000384827
  ensembl transcript: ENST00000401833
  gene symbol: TANGO2
  hgvsc: ENST00000401833.1:c.-156-3512C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000385662
  ensembl transcript: ENST00000401886
  gene symbol: TANGO2
  hgvsc: ENST00000401886.1:c.-39-3512C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000413850
  ensembl transcript: ENST00000432198
  gene symbol: TANGO2
  hgvsc: ENST00000432198.1:c.-39-3512C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000411602
  ensembl transcript: ENST00000434168
  gene symbol: TANGO2
  hgvsc: ENST00000434168.1:c.-39-3512C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000332721
  ensembl transcript: ENST00000327374
  gene symbol: TANGO2
  hgvsc: ENST00000327374.4:c.-39-3512C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000415450
  ensembl transcript: ENST00000450664
  gene symbol: TANGO2
  hgvsc: ENST00000450664.1:c.-39-3512C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000402926
  ensembl transcript: ENST00000432883
  gene symbol: TANGO2
  hgvsc: ENST00000432883.1:c.-39-3512C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000389797
  ensembl transcript: ENST00000447208
  gene symbol: TANGO2
  hgvsc: ENST00000447208.2:c.-39-3512C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000479679
  gene symbol: TANGO2
  hgvsc: ENST00000479679.1:n.126-3512C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000411907
  gene symbol: TANGO2
  hgvsc: ENST00000411907.1:n.67-3512C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000402966
  ensembl transcript: ENST00000450019
  gene symbol: TANGO2
  hgvsc: ENST00000450019.1:c.-39-3512C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000382706
  ensembl transcript: ENST00000399807
  gene symbol: TANGO2
  hgvsc: ENST00000399807.3:c.-156-3512C>T
  variant of: http://identifiers.org/hgnc/25439
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 909
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11937
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3928
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1152
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20494
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: East Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: BaseQRankSum

22-20020775-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20020775
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 20020775
    reference: chr 22
allele count: 1
allele frequency: 8.474863554696769e-6
allele num: 117996
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000402966
  ensembl transcript: ENST00000450019
  gene symbol: TANGO2
  hgvsc: ENST00000450019.1:c.-39-3508T>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000403432
  ensembl transcript: ENST00000430807
  gene symbol: TANGO2
  hgvsc: ENST00000430807.1:c.-39-3508T>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000415450
  ensembl transcript: ENST00000450664
  gene symbol: TANGO2
  hgvsc: ENST00000450664.1:c.-39-3508T>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000475446
  gene symbol: TANGO2
  hgvsc: ENST00000475446.1:n.163-3508T>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000385662
  ensembl transcript: ENST00000401886
  gene symbol: TANGO2
  hgvsc: ENST00000401886.1:c.-39-3508T>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000389797
  ensembl transcript: ENST00000447208
  gene symbol: TANGO2
  hgvsc: ENST00000447208.2:c.-39-3508T>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000479679
  gene symbol: TANGO2
  hgvsc: ENST00000479679.1:n.126-3508T>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000411907
  gene symbol: TANGO2
  hgvsc: ENST00000411907.1:n.67-3508T>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000471707
  gene symbol: TANGO2
  hgvsc: ENST00000471707.1:n.180-3508T>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000384827
  ensembl transcript: ENST00000401833
  gene symbol: TANGO2
  hgvsc: ENST00000401833.1:c.-156-3508T>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000413850
  ensembl transcript: ENST00000432198
  gene symbol: TANGO2
  hgvsc: ENST00000432198.1:c.-39-3508T>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000411602
  ensembl transcript: ENST00000434168
  gene symbol: TANGO2
  hgvsc: ENST00000434168.1:c.-39-3508T>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000332721
  ensembl transcript: ENST00000327374
  gene symbol: TANGO2
  hgvsc: ENST00000327374.4:c.-39-3508T>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000382706
  ensembl transcript: ENST00000399807
  gene symbol: TANGO2
  hgvsc: ENST00000399807.3:c.-156-3508T>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000402926
  ensembl transcript: ENST00000432883
  gene symbol: TANGO2
  hgvsc: ENST00000432883.1:c.-39-3508T>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000381122
  ensembl transcript: ENST00000398042
  gene symbol: TANGO2
  hgvsc: ENST00000398042.2:c.-39-3508T>A
  variant of: http://identifiers.org/hgnc/25439
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11602
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 905
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4390
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1993
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4439
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Latino
population: South Asian
population: Other
reference allele: T
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum

22-20020781-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20020781
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 20020781
    reference: chr 22
allele count: 105
allele frequency: 8.91553170532894e-4
allele num: 117772
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000385662
  ensembl transcript: ENST00000401886
  gene symbol: TANGO2
  hgvsc: ENST00000401886.1:c.-39-3502T>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000384827
  ensembl transcript: ENST00000401833
  gene symbol: TANGO2
  hgvsc: ENST00000401833.1:c.-156-3502T>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000479679
  gene symbol: TANGO2
  hgvsc: ENST00000479679.1:n.126-3502T>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000415450
  ensembl transcript: ENST00000450664
  gene symbol: TANGO2
  hgvsc: ENST00000450664.1:c.-39-3502T>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000413850
  ensembl transcript: ENST00000432198
  gene symbol: TANGO2
  hgvsc: ENST00000432198.1:c.-39-3502T>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000411602
  ensembl transcript: ENST00000434168
  gene symbol: TANGO2
  hgvsc: ENST00000434168.1:c.-39-3502T>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000402926
  ensembl transcript: ENST00000432883
  gene symbol: TANGO2
  hgvsc: ENST00000432883.1:c.-39-3502T>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000389797
  ensembl transcript: ENST00000447208
  gene symbol: TANGO2
  hgvsc: ENST00000447208.2:c.-39-3502T>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000382706
  ensembl transcript: ENST00000399807
  gene symbol: TANGO2
  hgvsc: ENST00000399807.3:c.-156-3502T>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000475446
  gene symbol: TANGO2
  hgvsc: ENST00000475446.1:n.163-3502T>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000402966
  ensembl transcript: ENST00000450019
  gene symbol: TANGO2
  hgvsc: ENST00000450019.1:c.-39-3502T>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000332721
  ensembl transcript: ENST00000327374
  gene symbol: TANGO2
  hgvsc: ENST00000327374.4:c.-39-3502T>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000381122
  ensembl transcript: ENST00000398042
  gene symbol: TANGO2
  hgvsc: ENST00000398042.2:c.-39-3502T>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000471707
  gene symbol: TANGO2
  hgvsc: ENST00000471707.1:n.180-3502T>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000411907
  gene symbol: TANGO2
  hgvsc: ENST00000411907.1:n.67-3502T>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000403432
  ensembl transcript: ENST00000430807
  gene symbol: TANGO2
  hgvsc: ENST00000430807.1:c.-39-3502T>A
  variant of: http://identifiers.org/hgnc/25439
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4512
  bin: 1.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9352
  bin: 3.25e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 11890
  bin: 2.25e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 1976
  bin: 4.25e1
  variant carriers: 9
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: African
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: T
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD

22-20020783-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20020783
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 20020783
    reference: chr 22
allele count: 258
allele frequency: 2.196791662409318e-3
allele num: 117444
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000411907
  gene symbol: TANGO2
  hgvsc: ENST00000411907.1:n.67-3500C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000384827
  ensembl transcript: ENST00000401833
  gene symbol: TANGO2
  hgvsc: ENST00000401833.1:c.-156-3500C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000382706
  ensembl transcript: ENST00000399807
  gene symbol: TANGO2
  hgvsc: ENST00000399807.3:c.-156-3500C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000385662
  ensembl transcript: ENST00000401886
  gene symbol: TANGO2
  hgvsc: ENST00000401886.1:c.-39-3500C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000389797
  ensembl transcript: ENST00000447208
  gene symbol: TANGO2
  hgvsc: ENST00000447208.2:c.-39-3500C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000475446
  gene symbol: TANGO2
  hgvsc: ENST00000475446.1:n.163-3500C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000402966
  ensembl transcript: ENST00000450019
  gene symbol: TANGO2
  hgvsc: ENST00000450019.1:c.-39-3500C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000479679
  gene symbol: TANGO2
  hgvsc: ENST00000479679.1:n.126-3500C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000403432
  ensembl transcript: ENST00000430807
  gene symbol: TANGO2
  hgvsc: ENST00000430807.1:c.-39-3500C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000413850
  ensembl transcript: ENST00000432198
  gene symbol: TANGO2
  hgvsc: ENST00000432198.1:c.-39-3500C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000411602
  ensembl transcript: ENST00000434168
  gene symbol: TANGO2
  hgvsc: ENST00000434168.1:c.-39-3500C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000471707
  gene symbol: TANGO2
  hgvsc: ENST00000471707.1:n.180-3500C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000415450
  ensembl transcript: ENST00000450664
  gene symbol: TANGO2
  hgvsc: ENST00000450664.1:c.-39-3500C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000332721
  ensembl transcript: ENST00000327374
  gene symbol: TANGO2
  hgvsc: ENST00000327374.4:c.-39-3500C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000381122
  ensembl transcript: ENST00000398042
  gene symbol: TANGO2
  hgvsc: ENST00000398042.2:c.-39-3500C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000402926
  ensembl transcript: ENST00000432883
  gene symbol: TANGO2
  hgvsc: ENST00000432883.1:c.-39-3500C>T
  variant of: http://identifiers.org/hgnc/25439
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8958
  bin: 3.25e1
  variant carriers: 32
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 9.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 5.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 15785
  bin: 2.75e1
  variant carriers: 55
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4233
  bin: 3.75e1
  variant carriers: 34
genotype depth: GenotypeDepth
  all individuals: 9135
  bin: 1.75e1
  variant carriers: 15
genotype quality: GenotypeQuality
num of homozygotes: 3
population: European (Finnish)
population: South Asian
population: Other
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
reference allele: C
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: DP
site quality: ClippingRankSum

22-20020784-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20020784
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 20020784
    reference: chr 22
allele count: 1
allele frequency: 8.528348229514908e-6
allele num: 117256
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000415450
  ensembl transcript: ENST00000450664
  gene symbol: TANGO2
  hgvsc: ENST00000450664.1:c.-39-3499G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000332721
  ensembl transcript: ENST00000327374
  gene symbol: TANGO2
  hgvsc: ENST00000327374.4:c.-39-3499G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000385662
  ensembl transcript: ENST00000401886
  gene symbol: TANGO2
  hgvsc: ENST00000401886.1:c.-39-3499G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000411907
  gene symbol: TANGO2
  hgvsc: ENST00000411907.1:n.67-3499G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000384827
  ensembl transcript: ENST00000401833
  gene symbol: TANGO2
  hgvsc: ENST00000401833.1:c.-156-3499G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000389797
  ensembl transcript: ENST00000447208
  gene symbol: TANGO2
  hgvsc: ENST00000447208.2:c.-39-3499G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000471707
  gene symbol: TANGO2
  hgvsc: ENST00000471707.1:n.180-3499G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000475446
  gene symbol: TANGO2
  hgvsc: ENST00000475446.1:n.163-3499G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000382706
  ensembl transcript: ENST00000399807
  gene symbol: TANGO2
  hgvsc: ENST00000399807.3:c.-156-3499G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000479679
  gene symbol: TANGO2
  hgvsc: ENST00000479679.1:n.126-3499G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000402926
  ensembl transcript: ENST00000432883
  gene symbol: TANGO2
  hgvsc: ENST00000432883.1:c.-39-3499G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000413850
  ensembl transcript: ENST00000432198
  gene symbol: TANGO2
  hgvsc: ENST00000432198.1:c.-39-3499G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000411602
  ensembl transcript: ENST00000434168
  gene symbol: TANGO2
  hgvsc: ENST00000434168.1:c.-39-3499G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000402966
  ensembl transcript: ENST00000450019
  gene symbol: TANGO2
  hgvsc: ENST00000450019.1:c.-39-3499G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000381122
  ensembl transcript: ENST00000398042
  gene symbol: TANGO2
  hgvsc: ENST00000398042.2:c.-39-3499G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000403432
  ensembl transcript: ENST00000430807
  gene symbol: TANGO2
  hgvsc: ENST00000430807.1:c.-39-3499G>A
  variant of: http://identifiers.org/hgnc/25439
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1361
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4196
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13029
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: Other
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Latino
reference allele: G
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum

22-20020792-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20020792
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 20020792
    reference: chr 22
allele count: 9
allele frequency: 7.69875622316128e-5
allele num: 116902
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000471707
  gene symbol: TANGO2
  hgvsc: ENST00000471707.1:n.180-3491C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000385662
  ensembl transcript: ENST00000401886
  gene symbol: TANGO2
  hgvsc: ENST00000401886.1:c.-39-3491C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000389797
  ensembl transcript: ENST00000447208
  gene symbol: TANGO2
  hgvsc: ENST00000447208.2:c.-39-3491C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000402966
  ensembl transcript: ENST00000450019
  gene symbol: TANGO2
  hgvsc: ENST00000450019.1:c.-39-3491C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000332721
  ensembl transcript: ENST00000327374
  gene symbol: TANGO2
  hgvsc: ENST00000327374.4:c.-39-3491C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000475446
  gene symbol: TANGO2
  hgvsc: ENST00000475446.1:n.163-3491C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000479679
  gene symbol: TANGO2
  hgvsc: ENST00000479679.1:n.126-3491C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000384827
  ensembl transcript: ENST00000401833
  gene symbol: TANGO2
  hgvsc: ENST00000401833.1:c.-156-3491C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000413850
  ensembl transcript: ENST00000432198
  gene symbol: TANGO2
  hgvsc: ENST00000432198.1:c.-39-3491C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000411602
  ensembl transcript: ENST00000434168
  gene symbol: TANGO2
  hgvsc: ENST00000434168.1:c.-39-3491C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000381122
  ensembl transcript: ENST00000398042
  gene symbol: TANGO2
  hgvsc: ENST00000398042.2:c.-39-3491C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000415450
  ensembl transcript: ENST00000450664
  gene symbol: TANGO2
  hgvsc: ENST00000450664.1:c.-39-3491C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000402926
  ensembl transcript: ENST00000432883
  gene symbol: TANGO2
  hgvsc: ENST00000432883.1:c.-39-3491C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000403432
  ensembl transcript: ENST00000430807
  gene symbol: TANGO2
  hgvsc: ENST00000430807.1:c.-39-3491C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000411907
  gene symbol: TANGO2
  hgvsc: ENST00000411907.1:n.67-3491C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000382706
  ensembl transcript: ENST00000399807
  gene symbol: TANGO2
  hgvsc: ENST00000399807.3:c.-156-3491C>T
  variant of: http://identifiers.org/hgnc/25439
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12715
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 886
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9212
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1534
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: Latino
population: East Asian
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: QD

22-20024271-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20024271
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 20024271
    reference: chr 22
allele count: 8
allele frequency: 6.593153010598494e-5
allele num: 121338
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000415450
  ensembl transcript: ENST00000450664
  gene symbol: TANGO2
  hgvsc: ENST00000450664.1:c.-39-12C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000413850
  ensembl transcript: ENST00000432198
  gene symbol: TANGO2
  hgvsc: ENST00000432198.1:c.-39-12C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000471707
  gene symbol: TANGO2
  hgvsc: ENST00000471707.1:n.180-12C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000411907
  gene symbol: TANGO2
  hgvsc: ENST00000411907.1:n.67-12C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000389797
  ensembl transcript: ENST00000447208
  gene symbol: TANGO2
  hgvsc: ENST00000447208.2:c.-39-12C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000332721
  ensembl transcript: ENST00000327374
  gene symbol: TANGO2
  hgvsc: ENST00000327374.4:c.-39-12C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000385662
  ensembl transcript: ENST00000401886
  gene symbol: TANGO2
  hgvsc: ENST00000401886.1:c.-39-12C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000479679
  gene symbol: TANGO2
  hgvsc: ENST00000479679.1:n.126-12C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000384827
  ensembl transcript: ENST00000401833
  gene symbol: TANGO2
  hgvsc: ENST00000401833.1:c.-156-12C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000411602
  ensembl transcript: ENST00000434168
  gene symbol: TANGO2
  hgvsc: ENST00000434168.1:c.-39-12C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000475446
  gene symbol: TANGO2
  hgvsc: ENST00000475446.1:n.163-12C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000402926
  ensembl transcript: ENST00000432883
  gene symbol: TANGO2
  hgvsc: ENST00000432883.1:c.-39-12C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000402966
  ensembl transcript: ENST00000450019
  gene symbol: TANGO2
  hgvsc: ENST00000450019.1:c.-39-12C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000403432
  ensembl transcript: ENST00000430807
  gene symbol: TANGO2
  hgvsc: ENST00000430807.1:c.-39-12C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000381122
  ensembl transcript: ENST00000398042
  gene symbol: TANGO2
  hgvsc: ENST00000398042.2:c.-39-12C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000382706
  ensembl transcript: ENST00000399807
  gene symbol: TANGO2
  hgvsc: ENST00000399807.3:c.-156-12C>T
  variant of: http://identifiers.org/hgnc/25439
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1019
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 634
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7588
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2198
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6605
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8435
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: African
population: South Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
reference allele: C
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum

22-20024278-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20024278
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 20024278
    reference: chr 22
allele count: 3
allele frequency: 2.472106399459433e-5
allele num: 121354
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000475446
  gene symbol: TANGO2
  hgvsc: ENST00000475446.1:n.163-5C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000384827
  ensembl transcript: ENST00000401833
  gene symbol: TANGO2
  hgvsc: ENST00000401833.1:c.-156-5C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000479679
  gene symbol: TANGO2
  hgvsc: ENST00000479679.1:n.126-5C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000381122
  ensembl transcript: ENST00000398042
  gene symbol: TANGO2
  hgvsc: ENST00000398042.2:c.-39-5C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000411602
  ensembl transcript: ENST00000434168
  gene symbol: TANGO2
  hgvsc: ENST00000434168.1:c.-39-5C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000385662
  ensembl transcript: ENST00000401886
  gene symbol: TANGO2
  hgvsc: ENST00000401886.1:c.-39-5C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000402966
  ensembl transcript: ENST00000450019
  gene symbol: TANGO2
  hgvsc: ENST00000450019.1:c.-39-5C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000411907
  gene symbol: TANGO2
  hgvsc: ENST00000411907.1:n.67-5C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000389797
  ensembl transcript: ENST00000447208
  gene symbol: TANGO2
  hgvsc: ENST00000447208.2:c.-39-5C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000413850
  ensembl transcript: ENST00000432198
  gene symbol: TANGO2
  hgvsc: ENST00000432198.1:c.-39-5C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000402926
  ensembl transcript: ENST00000432883
  gene symbol: TANGO2
  hgvsc: ENST00000432883.1:c.-39-5C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000332721
  ensembl transcript: ENST00000327374
  gene symbol: TANGO2
  hgvsc: ENST00000327374.4:c.-39-5C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000382706
  ensembl transcript: ENST00000399807
  gene symbol: TANGO2
  hgvsc: ENST00000399807.3:c.-156-5C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000471707
  gene symbol: TANGO2
  hgvsc: ENST00000471707.1:n.180-5C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000415450
  ensembl transcript: ENST00000450664
  gene symbol: TANGO2
  hgvsc: ENST00000450664.1:c.-39-5C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000403432
  ensembl transcript: ENST00000430807
  gene symbol: TANGO2
  hgvsc: ENST00000430807.1:c.-39-5C>T
  variant of: http://identifiers.org/hgnc/25439
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3910
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1448
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.-39-5C>T
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Other
population: African
population: European (Non-Finnish)
population: South Asian
population: Latino
reference allele: C
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum

22-20024279-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20024279
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 20024279
    reference: chr 22
allele count: 1
allele frequency: 8.239947264337508e-6
allele num: 121360
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000471707
  gene symbol: TANGO2
  hgvsc: ENST00000471707.1:n.180-4G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000402966
  ensembl transcript: ENST00000450019
  gene symbol: TANGO2
  hgvsc: ENST00000450019.1:c.-39-4G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000382706
  ensembl transcript: ENST00000399807
  gene symbol: TANGO2
  hgvsc: ENST00000399807.3:c.-156-4G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000381122
  ensembl transcript: ENST00000398042
  gene symbol: TANGO2
  hgvsc: ENST00000398042.2:c.-39-4G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000413850
  ensembl transcript: ENST00000432198
  gene symbol: TANGO2
  hgvsc: ENST00000432198.1:c.-39-4G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000403432
  ensembl transcript: ENST00000430807
  gene symbol: TANGO2
  hgvsc: ENST00000430807.1:c.-39-4G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000415450
  ensembl transcript: ENST00000450664
  gene symbol: TANGO2
  hgvsc: ENST00000450664.1:c.-39-4G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000411602
  ensembl transcript: ENST00000434168
  gene symbol: TANGO2
  hgvsc: ENST00000434168.1:c.-39-4G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000479679
  gene symbol: TANGO2
  hgvsc: ENST00000479679.1:n.126-4G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000389797
  ensembl transcript: ENST00000447208
  gene symbol: TANGO2
  hgvsc: ENST00000447208.2:c.-39-4G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000384827
  ensembl transcript: ENST00000401833
  gene symbol: TANGO2
  hgvsc: ENST00000401833.1:c.-156-4G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000385662
  ensembl transcript: ENST00000401886
  gene symbol: TANGO2
  hgvsc: ENST00000401886.1:c.-39-4G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000332721
  ensembl transcript: ENST00000327374
  gene symbol: TANGO2
  hgvsc: ENST00000327374.4:c.-39-4G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000411907
  gene symbol: TANGO2
  hgvsc: ENST00000411907.1:n.67-4G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000402926
  ensembl transcript: ENST00000432883
  gene symbol: TANGO2
  hgvsc: ENST00000432883.1:c.-39-4G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000475446
  gene symbol: TANGO2
  hgvsc: ENST00000475446.1:n.163-4G>A
  variant of: http://identifiers.org/hgnc/25439
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7898
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2736
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8435
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7573
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.-39-4G>A
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: Other
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum

22-20024283-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20024283
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 20024283
    reference: chr 22
allele count: 1
allele frequency: 8.239268352970255e-6
allele num: 121370
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000395816
  ensembl transcript: ENST00000444651
  gene symbol: TANGO2
  hgvsc: ENST00000444651.1:c.-39A>G
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000415450
  ensembl transcript: ENST00000450664
  gene symbol: TANGO2
  hgvsc: ENST00000450664.1:c.-39A>G
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000411907
  gene symbol: TANGO2
  hgvsc: ENST00000411907.1:n.67A>G
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000384827
  ensembl transcript: ENST00000401833
  gene symbol: TANGO2
  hgvsc: ENST00000401833.1:c.-156A>G
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000475446
  gene symbol: TANGO2
  hgvsc: ENST00000475446.1:n.163A>G
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000403432
  ensembl transcript: ENST00000430807
  gene symbol: TANGO2
  hgvsc: ENST00000430807.1:c.-39A>G
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000485715
  gene symbol: TANGO2
  hgvsc: ENST00000485715.2:n.1A>G
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000385662
  ensembl transcript: ENST00000401886
  gene symbol: TANGO2
  hgvsc: ENST00000401886.1:c.-39A>G
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000391262
  ensembl transcript: ENST00000434570
  gene symbol: TANGO2
  hgvsc: ENST00000434570.2:c.-156A>G
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000402966
  ensembl transcript: ENST00000450019
  gene symbol: TANGO2
  hgvsc: ENST00000450019.1:c.-39A>G
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000471707
  gene symbol: TANGO2
  hgvsc: ENST00000471707.1:n.180A>G
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000382706
  ensembl transcript: ENST00000399807
  gene symbol: TANGO2
  hgvsc: ENST00000399807.3:c.-156A>G
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000479679
  gene symbol: TANGO2
  hgvsc: ENST00000479679.1:n.126A>G
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000381122
  ensembl transcript: ENST00000398042
  gene symbol: TANGO2
  hgvsc: ENST00000398042.2:c.-39A>G
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000402926
  ensembl transcript: ENST00000432883
  gene symbol: TANGO2
  hgvsc: ENST00000432883.1:c.-39A>G
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000484373
  gene symbol: TANGO2
  hgvsc: ENST00000484373.1:n.1A>G
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000332721
  ensembl transcript: ENST00000327374
  gene symbol: TANGO2
  hgvsc: ENST00000327374.4:c.-39A>G
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000396182
  ensembl transcript: ENST00000420290
  gene symbol: TANGO2
  hgvsc: ENST00000420290.2:c.-218A>G
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000413850
  ensembl transcript: ENST00000432198
  gene symbol: TANGO2
  hgvsc: ENST00000432198.1:c.-39A>G
  variant of: http://identifiers.org/hgnc/25439
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: c.-39A>G
num of homozygotes: 0
population: East Asian
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: A
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS

22-20024287-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20024287
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 20024287
    reference: chr 22
allele count: 1
allele frequency: 8.239268352970255e-6
allele num: 121370
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000385662
  ensembl transcript: ENST00000401886
  gene symbol: TANGO2
  hgvsc: ENST00000401886.1:c.-35C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000391262
  ensembl transcript: ENST00000434570
  gene symbol: TANGO2
  hgvsc: ENST00000434570.2:c.-152C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000411602
  ensembl transcript: ENST00000434168
  gene symbol: TANGO2
  hgvsc: ENST00000434168.1:c.-35C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000403432
  ensembl transcript: ENST00000430807
  gene symbol: TANGO2
  hgvsc: ENST00000430807.1:c.-35C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000415450
  ensembl transcript: ENST00000450664
  gene symbol: TANGO2
  hgvsc: ENST00000450664.1:c.-35C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000332721
  ensembl transcript: ENST00000327374
  gene symbol: TANGO2
  hgvsc: ENST00000327374.4:c.-35C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000396182
  ensembl transcript: ENST00000420290
  gene symbol: TANGO2
  hgvsc: ENST00000420290.2:c.-214C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000485715
  gene symbol: TANGO2
  hgvsc: ENST00000485715.2:n.5C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000381122
  ensembl transcript: ENST00000398042
  gene symbol: TANGO2
  hgvsc: ENST00000398042.2:c.-35C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000484373
  gene symbol: TANGO2
  hgvsc: ENST00000484373.1:n.5C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000389797
  ensembl transcript: ENST00000447208
  gene symbol: TANGO2
  hgvsc: ENST00000447208.2:c.-35C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000395816
  ensembl transcript: ENST00000444651
  gene symbol: TANGO2
  hgvsc: ENST00000444651.1:c.-35C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000479679
  gene symbol: TANGO2
  hgvsc: ENST00000479679.1:n.130C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000411907
  gene symbol: TANGO2
  hgvsc: ENST00000411907.1:n.71C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000471707
  gene symbol: TANGO2
  hgvsc: ENST00000471707.1:n.184C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000384827
  ensembl transcript: ENST00000401833
  gene symbol: TANGO2
  hgvsc: ENST00000401833.1:c.-152C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000413850
  ensembl transcript: ENST00000432198
  gene symbol: TANGO2
  hgvsc: ENST00000432198.1:c.-35C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000402966
  ensembl transcript: ENST00000450019
  gene symbol: TANGO2
  hgvsc: ENST00000450019.1:c.-35C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000382706
  ensembl transcript: ENST00000399807
  gene symbol: TANGO2
  hgvsc: ENST00000399807.3:c.-152C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000475446
  gene symbol: TANGO2
  hgvsc: ENST00000475446.1:n.167C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000402926
  ensembl transcript: ENST00000432883
  gene symbol: TANGO2
  hgvsc: ENST00000432883.1:c.-35C>T
  variant of: http://identifiers.org/hgnc/25439
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Latino
population: East Asian
population: African
population: European (Finnish)
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: DP

22-20024288-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20024288
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 20024288
    reference: chr 22
allele count: 2
allele frequency: 1.64774506088418e-5
allele num: 121378
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000395816
  ensembl transcript: ENST00000444651
  gene symbol: TANGO2
  hgvsc: ENST00000444651.1:c.-34G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000471707
  gene symbol: TANGO2
  hgvsc: ENST00000471707.1:n.185G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000411602
  ensembl transcript: ENST00000434168
  gene symbol: TANGO2
  hgvsc: ENST00000434168.1:c.-34G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000479679
  gene symbol: TANGO2
  hgvsc: ENST00000479679.1:n.131G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000385662
  ensembl transcript: ENST00000401886
  gene symbol: TANGO2
  hgvsc: ENST00000401886.1:c.-34G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000384827
  ensembl transcript: ENST00000401833
  gene symbol: TANGO2
  hgvsc: ENST00000401833.1:c.-151G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000382706
  ensembl transcript: ENST00000399807
  gene symbol: TANGO2
  hgvsc: ENST00000399807.3:c.-151G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000381122
  ensembl transcript: ENST00000398042
  gene symbol: TANGO2
  hgvsc: ENST00000398042.2:c.-34G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000391262
  ensembl transcript: ENST00000434570
  gene symbol: TANGO2
  hgvsc: ENST00000434570.2:c.-151G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000411907
  gene symbol: TANGO2
  hgvsc: ENST00000411907.1:n.72G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000485715
  gene symbol: TANGO2
  hgvsc: ENST00000485715.2:n.6G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000403432
  ensembl transcript: ENST00000430807
  gene symbol: TANGO2
  hgvsc: ENST00000430807.1:c.-34G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000389797
  ensembl transcript: ENST00000447208
  gene symbol: TANGO2
  hgvsc: ENST00000447208.2:c.-34G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000332721
  ensembl transcript: ENST00000327374
  gene symbol: TANGO2
  hgvsc: ENST00000327374.4:c.-34G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000396182
  ensembl transcript: ENST00000420290
  gene symbol: TANGO2
  hgvsc: ENST00000420290.2:c.-213G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000484373
  gene symbol: TANGO2
  hgvsc: ENST00000484373.1:n.6G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000402926
  ensembl transcript: ENST00000432883
  gene symbol: TANGO2
  hgvsc: ENST00000432883.1:c.-34G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000413850
  ensembl transcript: ENST00000432198
  gene symbol: TANGO2
  hgvsc: ENST00000432198.1:c.-34G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000475446
  gene symbol: TANGO2
  hgvsc: ENST00000475446.1:n.168G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000462579
  gene symbol: TANGO2
  hgvsc: ENST00000462579.1:n.7G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000402966
  ensembl transcript: ENST00000450019
  gene symbol: TANGO2
  hgvsc: ENST00000450019.1:c.-34G>A
  variant of: http://identifiers.org/hgnc/25439
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: Other
population: European (Finnish)
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
reference allele: G
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD

22-20024290-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20024290
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 20024290
    reference: chr 22
allele count: 1
allele frequency: 8.238996819747227e-6
allele num: 121374
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000485715
  gene symbol: TANGO2
  hgvsc: ENST00000485715.2:n.8G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000415450
  ensembl transcript: ENST00000450664
  gene symbol: TANGO2
  hgvsc: ENST00000450664.1:c.-32G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000391262
  ensembl transcript: ENST00000434570
  gene symbol: TANGO2
  hgvsc: ENST00000434570.2:c.-149G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000411602
  ensembl transcript: ENST00000434168
  gene symbol: TANGO2
  hgvsc: ENST00000434168.1:c.-32G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000384827
  ensembl transcript: ENST00000401833
  gene symbol: TANGO2
  hgvsc: ENST00000401833.1:c.-149G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000396182
  ensembl transcript: ENST00000420290
  gene symbol: TANGO2
  hgvsc: ENST00000420290.2:c.-211G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000381122
  ensembl transcript: ENST00000398042
  gene symbol: TANGO2
  hgvsc: ENST00000398042.2:c.-32G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000484373
  gene symbol: TANGO2
  hgvsc: ENST00000484373.1:n.8G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000403432
  ensembl transcript: ENST00000430807
  gene symbol: TANGO2
  hgvsc: ENST00000430807.1:c.-32G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000382706
  ensembl transcript: ENST00000399807
  gene symbol: TANGO2
  hgvsc: ENST00000399807.3:c.-149G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000402966
  ensembl transcript: ENST00000450019
  gene symbol: TANGO2
  hgvsc: ENST00000450019.1:c.-32G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000332721
  ensembl transcript: ENST00000327374
  gene symbol: TANGO2
  hgvsc: ENST00000327374.4:c.-32G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000395816
  ensembl transcript: ENST00000444651
  gene symbol: TANGO2
  hgvsc: ENST00000444651.1:c.-32G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000479679
  gene symbol: TANGO2
  hgvsc: ENST00000479679.1:n.133G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000385662
  ensembl transcript: ENST00000401886
  gene symbol: TANGO2
  hgvsc: ENST00000401886.1:c.-32G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000471707
  gene symbol: TANGO2
  hgvsc: ENST00000471707.1:n.187G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000411907
  gene symbol: TANGO2
  hgvsc: ENST00000411907.1:n.74G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000402926
  ensembl transcript: ENST00000432883
  gene symbol: TANGO2
  hgvsc: ENST00000432883.1:c.-32G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000475446
  gene symbol: TANGO2
  hgvsc: ENST00000475446.1:n.170G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000413850
  ensembl transcript: ENST00000432198
  gene symbol: TANGO2
  hgvsc: ENST00000432198.1:c.-32G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000389797
  ensembl transcript: ENST00000447208
  gene symbol: TANGO2
  hgvsc: ENST00000447208.2:c.-32G>A
  variant of: http://identifiers.org/hgnc/25439
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Latino
population: East Asian
population: South Asian
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum

22-20024290-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20024290
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 20024290
    reference: chr 22
allele count: 3
allele frequency: 2.471699045924168e-5
allele num: 121374
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000402926
  ensembl transcript: ENST00000432883
  gene symbol: TANGO2
  hgvsc: ENST00000432883.1:c.-32G>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000384827
  ensembl transcript: ENST00000401833
  gene symbol: TANGO2
  hgvsc: ENST00000401833.1:c.-149G>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000411602
  ensembl transcript: ENST00000434168
  gene symbol: TANGO2
  hgvsc: ENST00000434168.1:c.-32G>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000484373
  gene symbol: TANGO2
  hgvsc: ENST00000484373.1:n.8G>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000462579
  gene symbol: TANGO2
  hgvsc: ENST00000462579.1:n.9G>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000385662
  ensembl transcript: ENST00000401886
  gene symbol: TANGO2
  hgvsc: ENST00000401886.1:c.-32G>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000395816
  ensembl transcript: ENST00000444651
  gene symbol: TANGO2
  hgvsc: ENST00000444651.1:c.-32G>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000381122
  ensembl transcript: ENST00000398042
  gene symbol: TANGO2
  hgvsc: ENST00000398042.2:c.-32G>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000471707
  gene symbol: TANGO2
  hgvsc: ENST00000471707.1:n.187G>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000415450
  ensembl transcript: ENST00000450664
  gene symbol: TANGO2
  hgvsc: ENST00000450664.1:c.-32G>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000382706
  ensembl transcript: ENST00000399807
  gene symbol: TANGO2
  hgvsc: ENST00000399807.3:c.-149G>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000403432
  ensembl transcript: ENST00000430807
  gene symbol: TANGO2
  hgvsc: ENST00000430807.1:c.-32G>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000391262
  ensembl transcript: ENST00000434570
  gene symbol: TANGO2
  hgvsc: ENST00000434570.2:c.-149G>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000396182
  ensembl transcript: ENST00000420290
  gene symbol: TANGO2
  hgvsc: ENST00000420290.2:c.-211G>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000479679
  gene symbol: TANGO2
  hgvsc: ENST00000479679.1:n.133G>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000402966
  ensembl transcript: ENST00000450019
  gene symbol: TANGO2
  hgvsc: ENST00000450019.1:c.-32G>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000332721
  ensembl transcript: ENST00000327374
  gene symbol: TANGO2
  hgvsc: ENST00000327374.4:c.-32G>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000475446
  gene symbol: TANGO2
  hgvsc: ENST00000475446.1:n.170G>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000389797
  ensembl transcript: ENST00000447208
  gene symbol: TANGO2
  hgvsc: ENST00000447208.2:c.-32G>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000413850
  ensembl transcript: ENST00000432198
  gene symbol: TANGO2
  hgvsc: ENST00000432198.1:c.-32G>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000411907
  gene symbol: TANGO2
  hgvsc: ENST00000411907.1:n.74G>T
  variant of: http://identifiers.org/hgnc/25439
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: African
population: South Asian
population: East Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum

22-20024306-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20024306
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 20024306
    reference: chr 22
allele count: 1
allele frequency: 8.238182327451271e-6
allele num: 121386
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000402926
  ensembl transcript: ENST00000432883
  gene symbol: TANGO2
  hgvsc: ENST00000432883.1:c.-16G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000403432
  ensembl transcript: ENST00000430807
  gene symbol: TANGO2
  hgvsc: ENST00000430807.1:c.-16G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000395816
  ensembl transcript: ENST00000444651
  gene symbol: TANGO2
  hgvsc: ENST00000444651.1:c.-16G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000391262
  ensembl transcript: ENST00000434570
  gene symbol: TANGO2
  hgvsc: ENST00000434570.2:c.-133G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000415450
  ensembl transcript: ENST00000450664
  gene symbol: TANGO2
  hgvsc: ENST00000450664.1:c.-16G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000413850
  ensembl transcript: ENST00000432198
  gene symbol: TANGO2
  hgvsc: ENST00000432198.1:c.-16G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000402966
  ensembl transcript: ENST00000450019
  gene symbol: TANGO2
  hgvsc: ENST00000450019.1:c.-16G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000462579
  gene symbol: TANGO2
  hgvsc: ENST00000462579.1:n.25G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000385662
  ensembl transcript: ENST00000401886
  gene symbol: TANGO2
  hgvsc: ENST00000401886.1:c.-16G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000411602
  ensembl transcript: ENST00000434168
  gene symbol: TANGO2
  hgvsc: ENST00000434168.1:c.-16G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000381122
  ensembl transcript: ENST00000398042
  gene symbol: TANGO2
  hgvsc: ENST00000398042.2:c.-16G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000384827
  ensembl transcript: ENST00000401833
  gene symbol: TANGO2
  hgvsc: ENST00000401833.1:c.-133G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000471707
  gene symbol: TANGO2
  hgvsc: ENST00000471707.1:n.203G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000411907
  gene symbol: TANGO2
  hgvsc: ENST00000411907.1:n.90G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000332721
  ensembl transcript: ENST00000327374
  gene symbol: TANGO2
  hgvsc: ENST00000327374.4:c.-16G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000396182
  ensembl transcript: ENST00000420290
  gene symbol: TANGO2
  hgvsc: ENST00000420290.2:c.-195G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000485715
  gene symbol: TANGO2
  hgvsc: ENST00000485715.2:n.24G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000475446
  gene symbol: TANGO2
  hgvsc: ENST00000475446.1:n.186G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000389797
  ensembl transcript: ENST00000447208
  gene symbol: TANGO2
  hgvsc: ENST00000447208.2:c.-16G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000382706
  ensembl transcript: ENST00000399807
  gene symbol: TANGO2
  hgvsc: ENST00000399807.3:c.-133G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000479679
  gene symbol: TANGO2
  hgvsc: ENST00000479679.1:n.149G>A
  variant of: http://identifiers.org/hgnc/25439
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: South Asian
population: East Asian
population: European (Finnish)
population: Latino
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD

22-20024308-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20024308
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 20024308
    reference: chr 22
allele count: 15
allele frequency: 1.235768071048426e-4
allele num: 121382
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000385662
  ensembl transcript: ENST00000401886
  gene symbol: TANGO2
  hgvsc: ENST00000401886.1:c.-14C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000479679
  gene symbol: TANGO2
  hgvsc: ENST00000479679.1:n.151C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000396182
  ensembl transcript: ENST00000420290
  gene symbol: TANGO2
  hgvsc: ENST00000420290.2:c.-193C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000411602
  ensembl transcript: ENST00000434168
  gene symbol: TANGO2
  hgvsc: ENST00000434168.1:c.-14C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000382706
  ensembl transcript: ENST00000399807
  gene symbol: TANGO2
  hgvsc: ENST00000399807.3:c.-131C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000384827
  ensembl transcript: ENST00000401833
  gene symbol: TANGO2
  hgvsc: ENST00000401833.1:c.-131C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000402966
  ensembl transcript: ENST00000450019
  gene symbol: TANGO2
  hgvsc: ENST00000450019.1:c.-14C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000402926
  ensembl transcript: ENST00000432883
  gene symbol: TANGO2
  hgvsc: ENST00000432883.1:c.-14C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000395816
  ensembl transcript: ENST00000444651
  gene symbol: TANGO2
  hgvsc: ENST00000444651.1:c.-14C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000403432
  ensembl transcript: ENST00000430807
  gene symbol: TANGO2
  hgvsc: ENST00000430807.1:c.-14C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000413850
  ensembl transcript: ENST00000432198
  gene symbol: TANGO2
  hgvsc: ENST00000432198.1:c.-14C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000415450
  ensembl transcript: ENST00000450664
  gene symbol: TANGO2
  hgvsc: ENST00000450664.1:c.-14C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000332721
  ensembl transcript: ENST00000327374
  gene symbol: TANGO2
  hgvsc: ENST00000327374.4:c.-14C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000389797
  ensembl transcript: ENST00000447208
  gene symbol: TANGO2
  hgvsc: ENST00000447208.2:c.-14C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000485715
  gene symbol: TANGO2
  hgvsc: ENST00000485715.2:n.26C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000381122
  ensembl transcript: ENST00000398042
  gene symbol: TANGO2
  hgvsc: ENST00000398042.2:c.-14C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000471707
  gene symbol: TANGO2
  hgvsc: ENST00000471707.1:n.205C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000462579
  gene symbol: TANGO2
  hgvsc: ENST00000462579.1:n.27C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000411907
  gene symbol: TANGO2
  hgvsc: ENST00000411907.1:n.92C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000391262
  ensembl transcript: ENST00000434570
  gene symbol: TANGO2
  hgvsc: ENST00000434570.2:c.-131C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000475446
  gene symbol: TANGO2
  hgvsc: ENST00000475446.1:n.188C>T
  variant of: http://identifiers.org/hgnc/25439
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: African
population: European (Non-Finnish)
population: South Asian
population: Latino
population: Other
population: European (Finnish)
reference allele: C
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum

22-20024309-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20024309
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 20024309
    reference: chr 22
allele count: 2
allele frequency: 1.64766361299677e-5
allele num: 121384
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000415450
  ensembl transcript: ENST00000450664
  gene symbol: TANGO2
  hgvsc: ENST00000450664.1:c.-13G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000389797
  ensembl transcript: ENST00000447208
  gene symbol: TANGO2
  hgvsc: ENST00000447208.2:c.-13G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000381122
  ensembl transcript: ENST00000398042
  gene symbol: TANGO2
  hgvsc: ENST00000398042.2:c.-13G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000382706
  ensembl transcript: ENST00000399807
  gene symbol: TANGO2
  hgvsc: ENST00000399807.3:c.-130G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000332721
  ensembl transcript: ENST00000327374
  gene symbol: TANGO2
  hgvsc: ENST00000327374.4:c.-13G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000391262
  ensembl transcript: ENST00000434570
  gene symbol: TANGO2
  hgvsc: ENST00000434570.2:c.-130G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000462579
  gene symbol: TANGO2
  hgvsc: ENST00000462579.1:n.28G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000384827
  ensembl transcript: ENST00000401833
  gene symbol: TANGO2
  hgvsc: ENST00000401833.1:c.-130G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000411602
  ensembl transcript: ENST00000434168
  gene symbol: TANGO2
  hgvsc: ENST00000434168.1:c.-13G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000385662
  ensembl transcript: ENST00000401886
  gene symbol: TANGO2
  hgvsc: ENST00000401886.1:c.-13G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000402966
  ensembl transcript: ENST00000450019
  gene symbol: TANGO2
  hgvsc: ENST00000450019.1:c.-13G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000395816
  ensembl transcript: ENST00000444651
  gene symbol: TANGO2
  hgvsc: ENST00000444651.1:c.-13G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000485715
  gene symbol: TANGO2
  hgvsc: ENST00000485715.2:n.27G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000396182
  ensembl transcript: ENST00000420290
  gene symbol: TANGO2
  hgvsc: ENST00000420290.2:c.-192G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000402926
  ensembl transcript: ENST00000432883
  gene symbol: TANGO2
  hgvsc: ENST00000432883.1:c.-13G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000413850
  ensembl transcript: ENST00000432198
  gene symbol: TANGO2
  hgvsc: ENST00000432198.1:c.-13G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000484373
  gene symbol: TANGO2
  hgvsc: ENST00000484373.1:n.27G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000411907
  gene symbol: TANGO2
  hgvsc: ENST00000411907.1:n.93G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000475446
  gene symbol: TANGO2
  hgvsc: ENST00000475446.1:n.189G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000471707
  gene symbol: TANGO2
  hgvsc: ENST00000471707.1:n.206G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000403432
  ensembl transcript: ENST00000430807
  gene symbol: TANGO2
  hgvsc: ENST00000430807.1:c.-13G>A
  variant of: http://identifiers.org/hgnc/25439
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: European (Finnish)
population: Other
population: South Asian
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/22-20024318-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20024318
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 20024318
    reference: chr 22
allele count: 3
allele frequency: 2.471291826614165e-5
allele num: 121394
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000411907
  gene symbol: TANGO2
  hgvsc: ENST00000411907.1:n.102C>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000403432
  ensembl transcript: ENST00000430807
  gene symbol: TANGO2
  hgvsc: ENST00000430807.1:c.-4C>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000415450
  ensembl transcript: ENST00000450664
  gene symbol: TANGO2
  hgvsc: ENST00000450664.1:c.-4C>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000332721
  ensembl transcript: ENST00000327374
  gene symbol: TANGO2
  hgvsc: ENST00000327374.4:c.-4C>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000402926
  ensembl transcript: ENST00000432883
  gene symbol: TANGO2
  hgvsc: ENST00000432883.1:c.-4C>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000391262
  ensembl transcript: ENST00000434570
  gene symbol: TANGO2
  hgvsc: ENST00000434570.2:c.-121C>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000385662
  ensembl transcript: ENST00000401886
  gene symbol: TANGO2
  hgvsc: ENST00000401886.1:c.-4C>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000384827
  ensembl transcript: ENST00000401833
  gene symbol: TANGO2
  hgvsc: ENST00000401833.1:c.-121C>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000411602
  ensembl transcript: ENST00000434168
  gene symbol: TANGO2
  hgvsc: ENST00000434168.1:c.-4C>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000395816
  ensembl transcript: ENST00000444651
  gene symbol: TANGO2
  hgvsc: ENST00000444651.1:c.-4C>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000484373
  gene symbol: TANGO2
  hgvsc: ENST00000484373.1:n.36C>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000381122
  ensembl transcript: ENST00000398042
  gene symbol: TANGO2
  hgvsc: ENST00000398042.2:c.-4C>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000475446
  gene symbol: TANGO2
  hgvsc: ENST00000475446.1:n.198C>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000382706
  ensembl transcript: ENST00000399807
  gene symbol: TANGO2
  hgvsc: ENST00000399807.3:c.-121C>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000413850
  ensembl transcript: ENST00000432198
  gene symbol: TANGO2
  hgvsc: ENST00000432198.1:c.-4C>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000462579
  gene symbol: TANGO2
  hgvsc: ENST00000462579.1:n.37C>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000396182
  ensembl transcript: ENST00000420290
  gene symbol: TANGO2
  hgvsc: ENST00000420290.2:c.-183C>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000389797
  ensembl transcript: ENST00000447208
  gene symbol: TANGO2
  hgvsc: ENST00000447208.2:c.-4C>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000402966
  ensembl transcript: ENST00000450019
  gene symbol: TANGO2
  hgvsc: ENST00000450019.1:c.-4C>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000485715
  gene symbol: TANGO2
  hgvsc: ENST00000485715.2:n.36C>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000471707
  gene symbol: TANGO2
  hgvsc: ENST00000471707.1:n.215C>A
  variant of: http://identifiers.org/hgnc/25439
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: African
population: Latino
population: Other
population: European (Finnish)
reference allele: C
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum

22-20024334-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20024334
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 20024334
    reference: chr 22
allele count: 1
allele frequency: 8.237367996177861e-6
allele num: 121398
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000402966
  ensembl transcript: ENST00000450019
  gene symbol: TANGO2
  hgvsc: ENST00000450019.1:c.13T>A
  hgvsp: ENSP00000402966.1:p.Phe5Ile
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000391262
  ensembl transcript: ENST00000434570
  gene symbol: TANGO2
  hgvsc: ENST00000434570.2:c.-105T>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000484373
  gene symbol: TANGO2
  hgvsc: ENST00000484373.1:n.52T>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000462579
  gene symbol: TANGO2
  hgvsc: ENST00000462579.1:n.53T>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000411602
  ensembl transcript: ENST00000434168
  gene symbol: TANGO2
  hgvsc: ENST00000434168.1:c.13T>A
  hgvsp: ENSP00000411602.1:p.Phe5Ile
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000396182
  ensembl transcript: ENST00000420290
  gene symbol: TANGO2
  hgvsc: ENST00000420290.2:c.-167T>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000415450
  ensembl transcript: ENST00000450664
  gene symbol: TANGO2
  hgvsc: ENST00000450664.1:c.13T>A
  hgvsp: ENSP00000415450.1:p.Phe5Ile
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000389797
  ensembl transcript: ENST00000447208
  gene symbol: TANGO2
  hgvsc: ENST00000447208.2:c.13T>A
  hgvsp: ENSP00000389797.2:p.Phe5Ile
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000413850
  ensembl transcript: ENST00000432198
  gene symbol: TANGO2
  hgvsc: ENST00000432198.1:c.13T>A
  hgvsp: ENSP00000413850.1:p.Phe5Ile
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000332721
  ensembl transcript: ENST00000327374
  gene symbol: TANGO2
  hgvsc: ENST00000327374.4:c.13T>A
  hgvsp: ENSP00000332721.4:p.Phe5Ile
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000382706
  ensembl transcript: ENST00000399807
  gene symbol: TANGO2
  hgvsc: ENST00000399807.3:c.-105T>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000381122
  ensembl transcript: ENST00000398042
  gene symbol: TANGO2
  hgvsc: ENST00000398042.2:c.13T>A
  hgvsp: ENSP00000381122.2:p.Phe5Ile
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000402926
  ensembl transcript: ENST00000432883
  gene symbol: TANGO2
  hgvsc: ENST00000432883.1:c.13T>A
  hgvsp: ENSP00000402926.1:p.Phe5Ile
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000471707
  gene symbol: TANGO2
  hgvsc: ENST00000471707.1:n.231T>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000403432
  ensembl transcript: ENST00000430807
  gene symbol: TANGO2
  hgvsc: ENST00000430807.1:c.13T>A
  hgvsp: ENSP00000403432.1:p.Phe5Ile
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000485715
  gene symbol: TANGO2
  hgvsc: ENST00000485715.2:n.52T>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000384827
  ensembl transcript: ENST00000401833
  gene symbol: TANGO2
  hgvsc: ENST00000401833.1:c.-105T>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000479679
  gene symbol: TANGO2
  hgvsc: ENST00000479679.1:n.177T>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000411907
  gene symbol: TANGO2
  hgvsc: ENST00000411907.1:n.118T>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000475446
  gene symbol: TANGO2
  hgvsc: ENST00000475446.1:n.214T>A
  variant of: http://identifiers.org/hgnc/25439
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Phe5Ile
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: African
population: South Asian
reference allele: T
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS

22-20024339-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20024339
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 20024339
    reference: chr 22
allele count: 1
allele frequency: 8.237367996177861e-6
allele num: 121398
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000413850
  ensembl transcript: ENST00000432198
  gene symbol: TANGO2
  hgvsc: ENST00000432198.1:c.18T>C
  hgvsp: ENST00000432198.1:c.18T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000485715
  gene symbol: TANGO2
  hgvsc: ENST00000485715.2:n.57T>C
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000484373
  gene symbol: TANGO2
  hgvsc: ENST00000484373.1:n.57T>C
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000462579
  gene symbol: TANGO2
  hgvsc: ENST00000462579.1:n.58T>C
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000381122
  ensembl transcript: ENST00000398042
  gene symbol: TANGO2
  hgvsc: ENST00000398042.2:c.18T>C
  hgvsp: ENST00000398042.2:c.18T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000332721
  ensembl transcript: ENST00000327374
  gene symbol: TANGO2
  hgvsc: ENST00000327374.4:c.18T>C
  hgvsp: ENST00000327374.4:c.18T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000382706
  ensembl transcript: ENST00000399807
  gene symbol: TANGO2
  hgvsc: ENST00000399807.3:c.-100T>C
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000411602
  ensembl transcript: ENST00000434168
  gene symbol: TANGO2
  hgvsc: ENST00000434168.1:c.18T>C
  hgvsp: ENST00000434168.1:c.18T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000411907
  gene symbol: TANGO2
  hgvsc: ENST00000411907.1:n.123T>C
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000402966
  ensembl transcript: ENST00000450019
  gene symbol: TANGO2
  hgvsc: ENST00000450019.1:c.18T>C
  hgvsp: ENST00000450019.1:c.18T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000395816
  ensembl transcript: ENST00000444651
  gene symbol: TANGO2
  hgvsc: ENST00000444651.1:c.18T>C
  hgvsp: ENST00000444651.1:c.18T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000403432
  ensembl transcript: ENST00000430807
  gene symbol: TANGO2
  hgvsc: ENST00000430807.1:c.18T>C
  hgvsp: ENST00000430807.1:c.18T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000415450
  ensembl transcript: ENST00000450664
  gene symbol: TANGO2
  hgvsc: ENST00000450664.1:c.18T>C
  hgvsp: ENST00000450664.1:c.18T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000385662
  ensembl transcript: ENST00000401886
  gene symbol: TANGO2
  hgvsc: ENST00000401886.1:c.18T>C
  hgvsp: ENST00000401886.1:c.18T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000402926
  ensembl transcript: ENST00000432883
  gene symbol: TANGO2
  hgvsc: ENST00000432883.1:c.18T>C
  hgvsp: ENST00000432883.1:c.18T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000471707
  gene symbol: TANGO2
  hgvsc: ENST00000471707.1:n.236T>C
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000391262
  ensembl transcript: ENST00000434570
  gene symbol: TANGO2
  hgvsc: ENST00000434570.2:c.-100T>C
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000479679
  gene symbol: TANGO2
  hgvsc: ENST00000479679.1:n.182T>C
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000389797
  ensembl transcript: ENST00000447208
  gene symbol: TANGO2
  hgvsc: ENST00000447208.2:c.18T>C
  hgvsp: ENST00000447208.2:c.18T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/25439
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Phe6Phe
num of homozygotes: 0
population: Other
population: South Asian
population: Latino
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: East Asian
reference allele: T
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: QD

22-20024347-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20024347
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 20024347
    reference: chr 22
allele count: 1
allele frequency: 8.237367996177861e-6
allele num: 121398
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000382706
  ensembl transcript: ENST00000399807
  gene symbol: TANGO2
  hgvsc: ENST00000399807.3:c.-92A>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000402966
  ensembl transcript: ENST00000450019
  gene symbol: TANGO2
  hgvsc: ENST00000450019.1:c.26A>T
  hgvsp: ENSP00000402966.1:p.Asp9Val
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000385662
  ensembl transcript: ENST00000401886
  gene symbol: TANGO2
  hgvsc: ENST00000401886.1:c.26A>T
  hgvsp: ENSP00000385662.1:p.Asp9Val
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000413850
  ensembl transcript: ENST00000432198
  gene symbol: TANGO2
  hgvsc: ENST00000432198.1:c.26A>T
  hgvsp: ENSP00000413850.1:p.Asp9Val
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000415450
  ensembl transcript: ENST00000450664
  gene symbol: TANGO2
  hgvsc: ENST00000450664.1:c.26A>T
  hgvsp: ENSP00000415450.1:p.Asp9Val
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000471707
  gene symbol: TANGO2
  hgvsc: ENST00000471707.1:n.244A>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000475446
  gene symbol: TANGO2
  hgvsc: ENST00000475446.1:n.227A>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000411602
  ensembl transcript: ENST00000434168
  gene symbol: TANGO2
  hgvsc: ENST00000434168.1:c.26A>T
  hgvsp: ENSP00000411602.1:p.Asp9Val
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000384827
  ensembl transcript: ENST00000401833
  gene symbol: TANGO2
  hgvsc: ENST00000401833.1:c.-92A>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000389797
  ensembl transcript: ENST00000447208
  gene symbol: TANGO2
  hgvsc: ENST00000447208.2:c.26A>T
  hgvsp: ENSP00000389797.2:p.Asp9Val
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000462579
  gene symbol: TANGO2
  hgvsc: ENST00000462579.1:n.66A>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000381122
  ensembl transcript: ENST00000398042
  gene symbol: TANGO2
  hgvsc: ENST00000398042.2:c.26A>T
  hgvsp: ENSP00000381122.2:p.Asp9Val
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000485715
  gene symbol: TANGO2
  hgvsc: ENST00000485715.2:n.65A>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000403432
  ensembl transcript: ENST00000430807
  gene symbol: TANGO2
  hgvsc: ENST00000430807.1:c.26A>T
  hgvsp: ENSP00000403432.1:p.Asp9Val
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000484373
  gene symbol: TANGO2
  hgvsc: ENST00000484373.1:n.65A>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000332721
  ensembl transcript: ENST00000327374
  gene symbol: TANGO2
  hgvsc: ENST00000327374.4:c.26A>T
  hgvsp: ENSP00000332721.4:p.Asp9Val
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000395816
  ensembl transcript: ENST00000444651
  gene symbol: TANGO2
  hgvsc: ENST00000444651.1:c.26A>T
  hgvsp: ENSP00000395816.1:p.Asp9Val
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000411907
  gene symbol: TANGO2
  hgvsc: ENST00000411907.1:n.131A>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000396182
  ensembl transcript: ENST00000420290
  gene symbol: TANGO2
  hgvsc: ENST00000420290.2:c.-154A>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000402926
  ensembl transcript: ENST00000432883
  gene symbol: TANGO2
  hgvsc: ENST00000432883.1:c.26A>T
  hgvsp: ENSP00000402926.1:p.Asp9Val
  variant of: http://identifiers.org/hgnc/25439
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Asp9Val
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: African
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: A
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: ReadPosRankSum

22-20024353-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20024353
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 20024353
    reference: chr 22
allele count: 1
allele frequency: 8.237367996177861e-6
allele num: 121398
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000415450
  ensembl transcript: ENST00000450664
  gene symbol: TANGO2
  hgvsc: ENST00000450664.1:c.32G>A
  hgvsp: ENSP00000415450.1:p.Arg11His
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000411907
  gene symbol: TANGO2
  hgvsc: ENST00000411907.1:n.137G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000411602
  ensembl transcript: ENST00000434168
  gene symbol: TANGO2
  hgvsc: ENST00000434168.1:c.32G>A
  hgvsp: ENSP00000411602.1:p.Arg11His
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000403432
  ensembl transcript: ENST00000430807
  gene symbol: TANGO2
  hgvsc: ENST00000430807.1:c.32G>A
  hgvsp: ENSP00000403432.1:p.Arg11His
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000413850
  ensembl transcript: ENST00000432198
  gene symbol: TANGO2
  hgvsc: ENST00000432198.1:c.32G>A
  hgvsp: ENSP00000413850.1:p.Arg11His
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000391262
  ensembl transcript: ENST00000434570
  gene symbol: TANGO2
  hgvsc: ENST00000434570.2:c.-86G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000384827
  ensembl transcript: ENST00000401833
  gene symbol: TANGO2
  hgvsc: ENST00000401833.1:c.-86G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000389797
  ensembl transcript: ENST00000447208
  gene symbol: TANGO2
  hgvsc: ENST00000447208.2:c.32G>A
  hgvsp: ENSP00000389797.2:p.Arg11His
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000382706
  ensembl transcript: ENST00000399807
  gene symbol: TANGO2
  hgvsc: ENST00000399807.3:c.-86G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000471707
  gene symbol: TANGO2
  hgvsc: ENST00000471707.1:n.250G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000381122
  ensembl transcript: ENST00000398042
  gene symbol: TANGO2
  hgvsc: ENST00000398042.2:c.32G>A
  hgvsp: ENSP00000381122.2:p.Arg11His
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000395816
  ensembl transcript: ENST00000444651
  gene symbol: TANGO2
  hgvsc: ENST00000444651.1:c.32G>A
  hgvsp: ENSP00000395816.1:p.Arg11His
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000479679
  gene symbol: TANGO2
  hgvsc: ENST00000479679.1:n.196G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000402966
  ensembl transcript: ENST00000450019
  gene symbol: TANGO2
  hgvsc: ENST00000450019.1:c.32G>A
  hgvsp: ENSP00000402966.1:p.Arg11His
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000462579
  gene symbol: TANGO2
  hgvsc: ENST00000462579.1:n.72G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000385662
  ensembl transcript: ENST00000401886
  gene symbol: TANGO2
  hgvsc: ENST00000401886.1:c.32G>A
  hgvsp: ENSP00000385662.1:p.Arg11His
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000332721
  ensembl transcript: ENST00000327374
  gene symbol: TANGO2
  hgvsc: ENST00000327374.4:c.32G>A
  hgvsp: ENSP00000332721.4:p.Arg11His
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000396182
  ensembl transcript: ENST00000420290
  gene symbol: TANGO2
  hgvsc: ENST00000420290.2:c.-148G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000485715
  gene symbol: TANGO2
  hgvsc: ENST00000485715.2:n.71G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000402926
  ensembl transcript: ENST00000432883
  gene symbol: TANGO2
  hgvsc: ENST00000432883.1:c.32G>A
  hgvsp: ENSP00000402926.1:p.Arg11His
  variant of: http://identifiers.org/hgnc/25439
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Arg11His
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Other
population: African
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD

22-20024358-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20024358
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 20024358
    reference: chr 22
allele count: 1
allele frequency: 8.237503706876667e-6
allele num: 121396
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000415450
  ensembl transcript: ENST00000450664
  gene symbol: TANGO2
  hgvsc: ENST00000450664.1:c.37G>C
  hgvsp: ENSP00000415450.1:p.Val13Leu
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000384827
  ensembl transcript: ENST00000401833
  gene symbol: TANGO2
  hgvsc: ENST00000401833.1:c.-81G>C
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000381122
  ensembl transcript: ENST00000398042
  gene symbol: TANGO2
  hgvsc: ENST00000398042.2:c.37G>C
  hgvsp: ENSP00000381122.2:p.Val13Leu
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000396182
  ensembl transcript: ENST00000420290
  gene symbol: TANGO2
  hgvsc: ENST00000420290.2:c.-143G>C
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000389797
  ensembl transcript: ENST00000447208
  gene symbol: TANGO2
  hgvsc: ENST00000447208.2:c.37G>C
  hgvsp: ENSP00000389797.2:p.Val13Leu
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000391262
  ensembl transcript: ENST00000434570
  gene symbol: TANGO2
  hgvsc: ENST00000434570.2:c.-81G>C
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000403432
  ensembl transcript: ENST00000430807
  gene symbol: TANGO2
  hgvsc: ENST00000430807.1:c.37G>C
  hgvsp: ENSP00000403432.1:p.Val13Leu
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000382706
  ensembl transcript: ENST00000399807
  gene symbol: TANGO2
  hgvsc: ENST00000399807.3:c.-81G>C
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000479679
  gene symbol: TANGO2
  hgvsc: ENST00000479679.1:n.201G>C
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000411602
  ensembl transcript: ENST00000434168
  gene symbol: TANGO2
  hgvsc: ENST00000434168.1:c.37G>C
  hgvsp: ENSP00000411602.1:p.Val13Leu
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000402966
  ensembl transcript: ENST00000450019
  gene symbol: TANGO2
  hgvsc: ENST00000450019.1:c.37G>C
  hgvsp: ENSP00000402966.1:p.Val13Leu
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000402926
  ensembl transcript: ENST00000432883
  gene symbol: TANGO2
  hgvsc: ENST00000432883.1:c.37G>C
  hgvsp: ENSP00000402926.1:p.Val13Leu
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000385662
  ensembl transcript: ENST00000401886
  gene symbol: TANGO2
  hgvsc: ENST00000401886.1:c.37G>C
  hgvsp: ENSP00000385662.1:p.Val13Leu
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000471707
  gene symbol: TANGO2
  hgvsc: ENST00000471707.1:n.255G>C
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000484373
  gene symbol: TANGO2
  hgvsc: ENST00000484373.1:n.76G>C
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000485715
  gene symbol: TANGO2
  hgvsc: ENST00000485715.2:n.76G>C
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000475446
  gene symbol: TANGO2
  hgvsc: ENST00000475446.1:n.238G>C
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000462579
  gene symbol: TANGO2
  hgvsc: ENST00000462579.1:n.77G>C
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000332721
  ensembl transcript: ENST00000327374
  gene symbol: TANGO2
  hgvsc: ENST00000327374.4:c.37G>C
  hgvsp: ENSP00000332721.4:p.Val13Leu
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000413850
  ensembl transcript: ENST00000432198
  gene symbol: TANGO2
  hgvsc: ENST00000432198.1:c.37G>C
  hgvsp: ENSP00000413850.1:p.Val13Leu
  variant of: http://identifiers.org/hgnc/25439
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Val13Leu
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Other
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
reference allele: G
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum

22-20024359-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20024359
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 20024359
    reference: chr 22
allele count: 2
allele frequency: 1.647500741375333e-5
allele num: 121396
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000391262
  ensembl transcript: ENST00000434570
  gene symbol: TANGO2
  hgvsc: ENST00000434570.2:c.-80T>C
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000395816
  ensembl transcript: ENST00000444651
  gene symbol: TANGO2
  hgvsc: ENST00000444651.1:c.38T>C
  hgvsp: ENSP00000395816.1:p.Val13Ala
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000402966
  ensembl transcript: ENST00000450019
  gene symbol: TANGO2
  hgvsc: ENST00000450019.1:c.38T>C
  hgvsp: ENSP00000402966.1:p.Val13Ala
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000484373
  gene symbol: TANGO2
  hgvsc: ENST00000484373.1:n.77T>C
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000332721
  ensembl transcript: ENST00000327374
  gene symbol: TANGO2
  hgvsc: ENST00000327374.4:c.38T>C
  hgvsp: ENSP00000332721.4:p.Val13Ala
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000475446
  gene symbol: TANGO2
  hgvsc: ENST00000475446.1:n.239T>C
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000396182
  ensembl transcript: ENST00000420290
  gene symbol: TANGO2
  hgvsc: ENST00000420290.2:c.-142T>C
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000402926
  ensembl transcript: ENST00000432883
  gene symbol: TANGO2
  hgvsc: ENST00000432883.1:c.38T>C
  hgvsp: ENSP00000402926.1:p.Val13Ala
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000411907
  gene symbol: TANGO2
  hgvsc: ENST00000411907.1:n.143T>C
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000411602
  ensembl transcript: ENST00000434168
  gene symbol: TANGO2
  hgvsc: ENST00000434168.1:c.38T>C
  hgvsp: ENSP00000411602.1:p.Val13Ala
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000403432
  ensembl transcript: ENST00000430807
  gene symbol: TANGO2
  hgvsc: ENST00000430807.1:c.38T>C
  hgvsp: ENSP00000403432.1:p.Val13Ala
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000384827
  ensembl transcript: ENST00000401833
  gene symbol: TANGO2
  hgvsc: ENST00000401833.1:c.-80T>C
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000415450
  ensembl transcript: ENST00000450664
  gene symbol: TANGO2
  hgvsc: ENST00000450664.1:c.38T>C
  hgvsp: ENSP00000415450.1:p.Val13Ala
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000385662
  ensembl transcript: ENST00000401886
  gene symbol: TANGO2
  hgvsc: ENST00000401886.1:c.38T>C
  hgvsp: ENSP00000385662.1:p.Val13Ala
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000479679
  gene symbol: TANGO2
  hgvsc: ENST00000479679.1:n.202T>C
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000389797
  ensembl transcript: ENST00000447208
  gene symbol: TANGO2
  hgvsc: ENST00000447208.2:c.38T>C
  hgvsp: ENSP00000389797.2:p.Val13Ala
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000471707
  gene symbol: TANGO2
  hgvsc: ENST00000471707.1:n.256T>C
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000382706
  ensembl transcript: ENST00000399807
  gene symbol: TANGO2
  hgvsc: ENST00000399807.3:c.-80T>C
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000485715
  gene symbol: TANGO2
  hgvsc: ENST00000485715.2:n.77T>C
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000413850
  ensembl transcript: ENST00000432198
  gene symbol: TANGO2
  hgvsc: ENST00000432198.1:c.38T>C
  hgvsp: ENSP00000413850.1:p.Val13Ala
  variant of: http://identifiers.org/hgnc/25439
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Val13Ala
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: East Asian
population: Other
population: South Asian
reference allele: T
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: FS
site quality: BaseQRankSum

http://identifiers.org/exac.variant/22-20024368-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20024368
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 20024368
    reference: chr 22
allele count: 1
allele frequency: 8.237775141689733e-6
allele num: 121392
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000415450
  ensembl transcript: ENST00000450664
  gene symbol: TANGO2
  hgvsc: ENST00000450664.1:c.47A>C
  hgvsp: ENSP00000415450.1:p.Asn16Thr
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000462579
  gene symbol: TANGO2
  hgvsc: ENST00000462579.1:n.87A>C
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000411602
  ensembl transcript: ENST00000434168
  gene symbol: TANGO2
  hgvsc: ENST00000434168.1:c.47A>C
  hgvsp: ENSP00000411602.1:p.Asn16Thr
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000381122
  ensembl transcript: ENST00000398042
  gene symbol: TANGO2
  hgvsc: ENST00000398042.2:c.47A>C
  hgvsp: ENSP00000381122.2:p.Asn16Thr
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000391262
  ensembl transcript: ENST00000434570
  gene symbol: TANGO2
  hgvsc: ENST00000434570.2:c.-71A>C
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000479679
  gene symbol: TANGO2
  hgvsc: ENST00000479679.1:n.211A>C
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000413850
  ensembl transcript: ENST00000432198
  gene symbol: TANGO2
  hgvsc: ENST00000432198.1:c.47A>C
  hgvsp: ENSP00000413850.1:p.Asn16Thr
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000384827
  ensembl transcript: ENST00000401833
  gene symbol: TANGO2
  hgvsc: ENST00000401833.1:c.-71A>C
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000403432
  ensembl transcript: ENST00000430807
  gene symbol: TANGO2
  hgvsc: ENST00000430807.1:c.47A>C
  hgvsp: ENSP00000403432.1:p.Asn16Thr
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000475446
  gene symbol: TANGO2
  hgvsc: ENST00000475446.1:n.248A>C
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000385662
  ensembl transcript: ENST00000401886
  gene symbol: TANGO2
  hgvsc: ENST00000401886.1:c.47A>C
  hgvsp: ENSP00000385662.1:p.Asn16Thr
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000332721
  ensembl transcript: ENST00000327374
  gene symbol: TANGO2
  hgvsc: ENST00000327374.4:c.47A>C
  hgvsp: ENSP00000332721.4:p.Asn16Thr
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000389797
  ensembl transcript: ENST00000447208
  gene symbol: TANGO2
  hgvsc: ENST00000447208.2:c.47A>C
  hgvsp: ENSP00000389797.2:p.Asn16Thr
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000396182
  ensembl transcript: ENST00000420290
  gene symbol: TANGO2
  hgvsc: ENST00000420290.2:c.-133A>C
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000395816
  ensembl transcript: ENST00000444651
  gene symbol: TANGO2
  hgvsc: ENST00000444651.1:c.47A>C
  hgvsp: ENSP00000395816.1:p.Asn16Thr
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000402966
  ensembl transcript: ENST00000450019
  gene symbol: TANGO2
  hgvsc: ENST00000450019.1:c.47A>C
  hgvsp: ENSP00000402966.1:p.Asn16Thr
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000485715
  gene symbol: TANGO2
  hgvsc: ENST00000485715.2:n.86A>C
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000382706
  ensembl transcript: ENST00000399807
  gene symbol: TANGO2
  hgvsc: ENST00000399807.3:c.-71A>C
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000411907
  gene symbol: TANGO2
  hgvsc: ENST00000411907.1:n.152A>C
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000484373
  gene symbol: TANGO2
  hgvsc: ENST00000484373.1:n.86A>C
  variant of: http://identifiers.org/hgnc/25439
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Asn16Thr
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Other
population: African
population: European (Non-Finnish)
population: South Asian
population: Latino
reference allele: A
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: QD

22-20024369-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20024369
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 20024369
    reference: chr 22
allele count: 1
allele frequency: 8.237910865804433e-6
allele num: 121390
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000385662
  ensembl transcript: ENST00000401886
  gene symbol: TANGO2
  hgvsc: ENST00000401886.1:c.48C>T
  hgvsp: ENST00000401886.1:c.48C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000485715
  gene symbol: TANGO2
  hgvsc: ENST00000485715.2:n.87C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000471707
  gene symbol: TANGO2
  hgvsc: ENST00000471707.1:n.266C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000391262
  ensembl transcript: ENST00000434570
  gene symbol: TANGO2
  hgvsc: ENST00000434570.2:c.-70C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000389797
  ensembl transcript: ENST00000447208
  gene symbol: TANGO2
  hgvsc: ENST00000447208.2:c.48C>T
  hgvsp: ENST00000447208.2:c.48C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000382706
  ensembl transcript: ENST00000399807
  gene symbol: TANGO2
  hgvsc: ENST00000399807.3:c.-70C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000332721
  ensembl transcript: ENST00000327374
  gene symbol: TANGO2
  hgvsc: ENST00000327374.4:c.48C>T
  hgvsp: ENST00000327374.4:c.48C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000381122
  ensembl transcript: ENST00000398042
  gene symbol: TANGO2
  hgvsc: ENST00000398042.2:c.48C>T
  hgvsp: ENST00000398042.2:c.48C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000415450
  ensembl transcript: ENST00000450664
  gene symbol: TANGO2
  hgvsc: ENST00000450664.1:c.48C>T
  hgvsp: ENST00000450664.1:c.48C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000403432
  ensembl transcript: ENST00000430807
  gene symbol: TANGO2
  hgvsc: ENST00000430807.1:c.48C>T
  hgvsp: ENST00000430807.1:c.48C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000413850
  ensembl transcript: ENST00000432198
  gene symbol: TANGO2
  hgvsc: ENST00000432198.1:c.48C>T
  hgvsp: ENST00000432198.1:c.48C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000462579
  gene symbol: TANGO2
  hgvsc: ENST00000462579.1:n.88C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000396182
  ensembl transcript: ENST00000420290
  gene symbol: TANGO2
  hgvsc: ENST00000420290.2:c.-132C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000402966
  ensembl transcript: ENST00000450019
  gene symbol: TANGO2
  hgvsc: ENST00000450019.1:c.48C>T
  hgvsp: ENST00000450019.1:c.48C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000384827
  ensembl transcript: ENST00000401833
  gene symbol: TANGO2
  hgvsc: ENST00000401833.1:c.-70C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000402926
  ensembl transcript: ENST00000432883
  gene symbol: TANGO2
  hgvsc: ENST00000432883.1:c.48C>T
  hgvsp: ENST00000432883.1:c.48C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000411907
  gene symbol: TANGO2
  hgvsc: ENST00000411907.1:n.153C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000395816
  ensembl transcript: ENST00000444651
  gene symbol: TANGO2
  hgvsc: ENST00000444651.1:c.48C>T
  hgvsp: ENST00000444651.1:c.48C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000475446
  gene symbol: TANGO2
  hgvsc: ENST00000475446.1:n.249C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000411602
  ensembl transcript: ENST00000434168
  gene symbol: TANGO2
  hgvsc: ENST00000434168.1:c.48C>T
  hgvsp: ENST00000434168.1:c.48C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25439
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Asn16Asn
num of homozygotes: 0
population: East Asian
population: Other
population: South Asian
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
reference allele: C
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum

22-20024370-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20024370
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 20024370
    reference: chr 22
allele count: 4
allele frequency: 3.295218637756615e-5
allele num: 121388
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000402926
  ensembl transcript: ENST00000432883
  gene symbol: TANGO2
  hgvsc: ENST00000432883.1:c.49G>A
  hgvsp: ENSP00000402926.1:p.Ala17Thr
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000411602
  ensembl transcript: ENST00000434168
  gene symbol: TANGO2
  hgvsc: ENST00000434168.1:c.49G>A
  hgvsp: ENSP00000411602.1:p.Ala17Thr
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000484373
  gene symbol: TANGO2
  hgvsc: ENST00000484373.1:n.88G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000485715
  gene symbol: TANGO2
  hgvsc: ENST00000485715.2:n.88G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000402966
  ensembl transcript: ENST00000450019
  gene symbol: TANGO2
  hgvsc: ENST00000450019.1:c.49G>A
  hgvsp: ENSP00000402966.1:p.Ala17Thr
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000391262
  ensembl transcript: ENST00000434570
  gene symbol: TANGO2
  hgvsc: ENST00000434570.2:c.-69G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000332721
  ensembl transcript: ENST00000327374
  gene symbol: TANGO2
  hgvsc: ENST00000327374.4:c.49G>A
  hgvsp: ENSP00000332721.4:p.Ala17Thr
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000396182
  ensembl transcript: ENST00000420290
  gene symbol: TANGO2
  hgvsc: ENST00000420290.2:c.-131G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000415450
  ensembl transcript: ENST00000450664
  gene symbol: TANGO2
  hgvsc: ENST00000450664.1:c.49G>A
  hgvsp: ENSP00000415450.1:p.Ala17Thr
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000413850
  ensembl transcript: ENST00000432198
  gene symbol: TANGO2
  hgvsc: ENST00000432198.1:c.49G>A
  hgvsp: ENSP00000413850.1:p.Ala17Thr
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000411907
  gene symbol: TANGO2
  hgvsc: ENST00000411907.1:n.154G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000384827
  ensembl transcript: ENST00000401833
  gene symbol: TANGO2
  hgvsc: ENST00000401833.1:c.-69G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000471707
  gene symbol: TANGO2
  hgvsc: ENST00000471707.1:n.267G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000385662
  ensembl transcript: ENST00000401886
  gene symbol: TANGO2
  hgvsc: ENST00000401886.1:c.49G>A
  hgvsp: ENSP00000385662.1:p.Ala17Thr
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000382706
  ensembl transcript: ENST00000399807
  gene symbol: TANGO2
  hgvsc: ENST00000399807.3:c.-69G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000381122
  ensembl transcript: ENST00000398042
  gene symbol: TANGO2
  hgvsc: ENST00000398042.2:c.49G>A
  hgvsp: ENSP00000381122.2:p.Ala17Thr
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000389797
  ensembl transcript: ENST00000447208
  gene symbol: TANGO2
  hgvsc: ENST00000447208.2:c.49G>A
  hgvsp: ENSP00000389797.2:p.Ala17Thr
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000395816
  ensembl transcript: ENST00000444651
  gene symbol: TANGO2
  hgvsc: ENST00000444651.1:c.49G>A
  hgvsp: ENSP00000395816.1:p.Ala17Thr
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000475446
  gene symbol: TANGO2
  hgvsc: ENST00000475446.1:n.250G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000462579
  gene symbol: TANGO2
  hgvsc: ENST00000462579.1:n.89G>A
  variant of: http://identifiers.org/hgnc/25439
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Ala17Thr
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Other
population: Latino
population: European (Finnish)
population: African
reference allele: G
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD

22-20024371-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20024371
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 20024371
    reference: chr 22
allele count: 3
allele frequency: 2.47137325974133e-5
allele num: 121390
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000484373
  gene symbol: TANGO2
  hgvsc: ENST00000484373.1:n.89C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000411907
  gene symbol: TANGO2
  hgvsc: ENST00000411907.1:n.155C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000462579
  gene symbol: TANGO2
  hgvsc: ENST00000462579.1:n.90C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000381122
  ensembl transcript: ENST00000398042
  gene symbol: TANGO2
  hgvsc: ENST00000398042.2:c.50C>T
  hgvsp: ENSP00000381122.2:p.Ala17Val
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000402966
  ensembl transcript: ENST00000450019
  gene symbol: TANGO2
  hgvsc: ENST00000450019.1:c.50C>T
  hgvsp: ENSP00000402966.1:p.Ala17Val
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000411602
  ensembl transcript: ENST00000434168
  gene symbol: TANGO2
  hgvsc: ENST00000434168.1:c.50C>T
  hgvsp: ENSP00000411602.1:p.Ala17Val
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000396182
  ensembl transcript: ENST00000420290
  gene symbol: TANGO2
  hgvsc: ENST00000420290.2:c.-130C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000479679
  gene symbol: TANGO2
  hgvsc: ENST00000479679.1:n.214C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000415450
  ensembl transcript: ENST00000450664
  gene symbol: TANGO2
  hgvsc: ENST00000450664.1:c.50C>T
  hgvsp: ENSP00000415450.1:p.Ala17Val
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000385662
  ensembl transcript: ENST00000401886
  gene symbol: TANGO2
  hgvsc: ENST00000401886.1:c.50C>T
  hgvsp: ENSP00000385662.1:p.Ala17Val
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000395816
  ensembl transcript: ENST00000444651
  gene symbol: TANGO2
  hgvsc: ENST00000444651.1:c.50C>T
  hgvsp: ENSP00000395816.1:p.Ala17Val
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000391262
  ensembl transcript: ENST00000434570
  gene symbol: TANGO2
  hgvsc: ENST00000434570.2:c.-68C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000413850
  ensembl transcript: ENST00000432198
  gene symbol: TANGO2
  hgvsc: ENST00000432198.1:c.50C>T
  hgvsp: ENSP00000413850.1:p.Ala17Val
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000402926
  ensembl transcript: ENST00000432883
  gene symbol: TANGO2
  hgvsc: ENST00000432883.1:c.50C>T
  hgvsp: ENSP00000402926.1:p.Ala17Val
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000389797
  ensembl transcript: ENST00000447208
  gene symbol: TANGO2
  hgvsc: ENST00000447208.2:c.50C>T
  hgvsp: ENSP00000389797.2:p.Ala17Val
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000332721
  ensembl transcript: ENST00000327374
  gene symbol: TANGO2
  hgvsc: ENST00000327374.4:c.50C>T
  hgvsp: ENSP00000332721.4:p.Ala17Val
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000403432
  ensembl transcript: ENST00000430807
  gene symbol: TANGO2
  hgvsc: ENST00000430807.1:c.50C>T
  hgvsp: ENSP00000403432.1:p.Ala17Val
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000485715
  gene symbol: TANGO2
  hgvsc: ENST00000485715.2:n.89C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000471707
  gene symbol: TANGO2
  hgvsc: ENST00000471707.1:n.268C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000475446
  gene symbol: TANGO2
  hgvsc: ENST00000475446.1:n.251C>T
  variant of: http://identifiers.org/hgnc/25439
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Ala17Val
num of homozygotes: 0
population: Latino
population: Other
population: East Asian
population: South Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
reference allele: C
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum

22-20024387-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20024387
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 20024387
    reference: chr 22
allele count: 1
allele frequency: 8.238453806989504e-6
allele num: 121382
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000485715
  gene symbol: TANGO2
  hgvsc: ENST00000485715.2:n.95+10T>C
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000402966
  ensembl transcript: ENST00000450019
  gene symbol: TANGO2
  hgvsc: ENST00000450019.1:c.56+10T>C
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000479679
  gene symbol: TANGO2
  hgvsc: ENST00000479679.1:n.220+10T>C
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000411602
  ensembl transcript: ENST00000434168
  gene symbol: TANGO2
  hgvsc: ENST00000434168.1:c.56+10T>C
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000403432
  ensembl transcript: ENST00000430807
  gene symbol: TANGO2
  hgvsc: ENST00000430807.1:c.56+10T>C
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000484373
  gene symbol: TANGO2
  hgvsc: ENST00000484373.1:n.95+10T>C
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000381122
  ensembl transcript: ENST00000398042
  gene symbol: TANGO2
  hgvsc: ENST00000398042.2:c.56+10T>C
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000382706
  ensembl transcript: ENST00000399807
  gene symbol: TANGO2
  hgvsc: ENST00000399807.3:c.-52T>C
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000396182
  ensembl transcript: ENST00000420290
  gene symbol: TANGO2
  hgvsc: ENST00000420290.2:c.-124+10T>C
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000384827
  ensembl transcript: ENST00000401833
  gene symbol: TANGO2
  hgvsc: ENST00000401833.1:c.-52T>C
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000402926
  ensembl transcript: ENST00000432883
  gene symbol: TANGO2
  hgvsc: ENST00000432883.1:c.56+10T>C
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000471707
  gene symbol: TANGO2
  hgvsc: ENST00000471707.1:n.274+10T>C
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000415450
  ensembl transcript: ENST00000450664
  gene symbol: TANGO2
  hgvsc: ENST00000450664.1:c.56+10T>C
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000391262
  ensembl transcript: ENST00000434570
  gene symbol: TANGO2
  hgvsc: ENST00000434570.2:c.-52T>C
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000413850
  ensembl transcript: ENST00000432198
  gene symbol: TANGO2
  hgvsc: ENST00000432198.1:c.56+10T>C
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000332721
  ensembl transcript: ENST00000327374
  gene symbol: TANGO2
  hgvsc: ENST00000327374.4:c.56+10T>C
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000389797
  ensembl transcript: ENST00000447208
  gene symbol: TANGO2
  hgvsc: ENST00000447208.2:c.56+10T>C
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000385662
  ensembl transcript: ENST00000401886
  gene symbol: TANGO2
  hgvsc: ENST00000401886.1:c.56+10T>C
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000411907
  gene symbol: TANGO2
  hgvsc: ENST00000411907.1:n.161+10T>C
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000462579
  gene symbol: TANGO2
  hgvsc: ENST00000462579.1:n.96+10T>C
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000395816
  ensembl transcript: ENST00000444651
  gene symbol: TANGO2
  hgvsc: ENST00000444651.1:c.56+10T>C
  variant of: http://identifiers.org/hgnc/25439
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: Other
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: T
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD

22-20024388-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20024388
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 20024388
    reference: chr 22
allele count: 1
allele frequency: 8.238318064983852e-6
allele num: 121384
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000471707
  gene symbol: TANGO2
  hgvsc: ENST00000471707.1:n.274+11C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000381122
  ensembl transcript: ENST00000398042
  gene symbol: TANGO2
  hgvsc: ENST00000398042.2:c.56+11C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000391262
  ensembl transcript: ENST00000434570
  gene symbol: TANGO2
  hgvsc: ENST00000434570.2:c.-51C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000413850
  ensembl transcript: ENST00000432198
  gene symbol: TANGO2
  hgvsc: ENST00000432198.1:c.56+11C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000382706
  ensembl transcript: ENST00000399807
  gene symbol: TANGO2
  hgvsc: ENST00000399807.3:c.-51C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000484373
  gene symbol: TANGO2
  hgvsc: ENST00000484373.1:n.95+11C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000462579
  gene symbol: TANGO2
  hgvsc: ENST00000462579.1:n.96+11C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000332721
  ensembl transcript: ENST00000327374
  gene symbol: TANGO2
  hgvsc: ENST00000327374.4:c.56+11C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000384827
  ensembl transcript: ENST00000401833
  gene symbol: TANGO2
  hgvsc: ENST00000401833.1:c.-51C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000402966
  ensembl transcript: ENST00000450019
  gene symbol: TANGO2
  hgvsc: ENST00000450019.1:c.56+11C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000485715
  gene symbol: TANGO2
  hgvsc: ENST00000485715.2:n.95+11C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000479679
  gene symbol: TANGO2
  hgvsc: ENST00000479679.1:n.220+11C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000385662
  ensembl transcript: ENST00000401886
  gene symbol: TANGO2
  hgvsc: ENST00000401886.1:c.56+11C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000475446
  gene symbol: TANGO2
  hgvsc: ENST00000475446.1:n.257+11C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000403432
  ensembl transcript: ENST00000430807
  gene symbol: TANGO2
  hgvsc: ENST00000430807.1:c.56+11C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000411907
  gene symbol: TANGO2
  hgvsc: ENST00000411907.1:n.161+11C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000396182
  ensembl transcript: ENST00000420290
  gene symbol: TANGO2
  hgvsc: ENST00000420290.2:c.-124+11C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000402926
  ensembl transcript: ENST00000432883
  gene symbol: TANGO2
  hgvsc: ENST00000432883.1:c.56+11C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000411602
  ensembl transcript: ENST00000434168
  gene symbol: TANGO2
  hgvsc: ENST00000434168.1:c.56+11C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000395816
  ensembl transcript: ENST00000444651
  gene symbol: TANGO2
  hgvsc: ENST00000444651.1:c.56+11C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000415450
  ensembl transcript: ENST00000450664
  gene symbol: TANGO2
  hgvsc: ENST00000450664.1:c.56+11C>T
  variant of: http://identifiers.org/hgnc/25439
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Latino
population: European (Non-Finnish)
population: African
population: Other
population: East Asian
reference allele: C
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: FS

22-20024389-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20024389
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 20024389
    reference: chr 22
allele count: 2
allele frequency: 1.64766361299677e-5
allele num: 121384
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000396182
  ensembl transcript: ENST00000420290
  gene symbol: TANGO2
  hgvsc: ENST00000420290.2:c.-124+12G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000475446
  gene symbol: TANGO2
  hgvsc: ENST00000475446.1:n.257+12G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000402966
  ensembl transcript: ENST00000450019
  gene symbol: TANGO2
  hgvsc: ENST00000450019.1:c.56+12G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000485715
  gene symbol: TANGO2
  hgvsc: ENST00000485715.2:n.95+12G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000411602
  ensembl transcript: ENST00000434168
  gene symbol: TANGO2
  hgvsc: ENST00000434168.1:c.56+12G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000382706
  ensembl transcript: ENST00000399807
  gene symbol: TANGO2
  hgvsc: ENST00000399807.3:c.-50G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000389797
  ensembl transcript: ENST00000447208
  gene symbol: TANGO2
  hgvsc: ENST00000447208.2:c.56+12G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000391262
  ensembl transcript: ENST00000434570
  gene symbol: TANGO2
  hgvsc: ENST00000434570.2:c.-50G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000395816
  ensembl transcript: ENST00000444651
  gene symbol: TANGO2
  hgvsc: ENST00000444651.1:c.56+12G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000403432
  ensembl transcript: ENST00000430807
  gene symbol: TANGO2
  hgvsc: ENST00000430807.1:c.56+12G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000471707
  gene symbol: TANGO2
  hgvsc: ENST00000471707.1:n.274+12G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000384827
  ensembl transcript: ENST00000401833
  gene symbol: TANGO2
  hgvsc: ENST00000401833.1:c.-50G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000462579
  gene symbol: TANGO2
  hgvsc: ENST00000462579.1:n.96+12G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000411907
  gene symbol: TANGO2
  hgvsc: ENST00000411907.1:n.161+12G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000484373
  gene symbol: TANGO2
  hgvsc: ENST00000484373.1:n.95+12G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000332721
  ensembl transcript: ENST00000327374
  gene symbol: TANGO2
  hgvsc: ENST00000327374.4:c.56+12G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000479679
  gene symbol: TANGO2
  hgvsc: ENST00000479679.1:n.220+12G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000385662
  ensembl transcript: ENST00000401886
  gene symbol: TANGO2
  hgvsc: ENST00000401886.1:c.56+12G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000415450
  ensembl transcript: ENST00000450664
  gene symbol: TANGO2
  hgvsc: ENST00000450664.1:c.56+12G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000402926
  ensembl transcript: ENST00000432883
  gene symbol: TANGO2
  hgvsc: ENST00000432883.1:c.56+12G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000413850
  ensembl transcript: ENST00000432198
  gene symbol: TANGO2
  hgvsc: ENST00000432198.1:c.56+12G>A
  variant of: http://identifiers.org/hgnc/25439
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Other
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP

22-20024390-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20024390
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 20024390
    reference: chr 22
allele count: 1
allele frequency: 8.238318064983852e-6
allele num: 121384
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000415450
  ensembl transcript: ENST00000450664
  gene symbol: TANGO2
  hgvsc: ENST00000450664.1:c.56+13C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000395816
  ensembl transcript: ENST00000444651
  gene symbol: TANGO2
  hgvsc: ENST00000444651.1:c.56+13C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000462579
  gene symbol: TANGO2
  hgvsc: ENST00000462579.1:n.96+13C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000403432
  ensembl transcript: ENST00000430807
  gene symbol: TANGO2
  hgvsc: ENST00000430807.1:c.56+13C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000382706
  ensembl transcript: ENST00000399807
  gene symbol: TANGO2
  hgvsc: ENST00000399807.3:c.-49C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000402926
  ensembl transcript: ENST00000432883
  gene symbol: TANGO2
  hgvsc: ENST00000432883.1:c.56+13C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000411907
  gene symbol: TANGO2
  hgvsc: ENST00000411907.1:n.161+13C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000485715
  gene symbol: TANGO2
  hgvsc: ENST00000485715.2:n.95+13C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000479679
  gene symbol: TANGO2
  hgvsc: ENST00000479679.1:n.220+13C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000332721
  ensembl transcript: ENST00000327374
  gene symbol: TANGO2
  hgvsc: ENST00000327374.4:c.56+13C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000413850
  ensembl transcript: ENST00000432198
  gene symbol: TANGO2
  hgvsc: ENST00000432198.1:c.56+13C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000471707
  gene symbol: TANGO2
  hgvsc: ENST00000471707.1:n.274+13C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000384827
  ensembl transcript: ENST00000401833
  gene symbol: TANGO2
  hgvsc: ENST00000401833.1:c.-49C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000402966
  ensembl transcript: ENST00000450019
  gene symbol: TANGO2
  hgvsc: ENST00000450019.1:c.56+13C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000475446
  gene symbol: TANGO2
  hgvsc: ENST00000475446.1:n.257+13C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000396182
  ensembl transcript: ENST00000420290
  gene symbol: TANGO2
  hgvsc: ENST00000420290.2:c.-124+13C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000391262
  ensembl transcript: ENST00000434570
  gene symbol: TANGO2
  hgvsc: ENST00000434570.2:c.-49C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000381122
  ensembl transcript: ENST00000398042
  gene symbol: TANGO2
  hgvsc: ENST00000398042.2:c.56+13C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000484373
  gene symbol: TANGO2
  hgvsc: ENST00000484373.1:n.95+13C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000389797
  ensembl transcript: ENST00000447208
  gene symbol: TANGO2
  hgvsc: ENST00000447208.2:c.56+13C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000411602
  ensembl transcript: ENST00000434168
  gene symbol: TANGO2
  hgvsc: ENST00000434168.1:c.56+13C>T
  variant of: http://identifiers.org/hgnc/25439
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: East Asian
population: Other
population: South Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP

22-20024404-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20024404
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 20024404
    reference: chr 22
allele count: 322
allele frequency: 2.65356913289272e-3
allele num: 121346
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000413850
  ensembl transcript: ENST00000432198
  gene symbol: TANGO2
  hgvsc: ENST00000432198.1:c.56+27C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000485715
  gene symbol: TANGO2
  hgvsc: ENST00000485715.2:n.95+27C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000415450
  ensembl transcript: ENST00000450664
  gene symbol: TANGO2
  hgvsc: ENST00000450664.1:c.56+27C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000403432
  ensembl transcript: ENST00000430807
  gene symbol: TANGO2
  hgvsc: ENST00000430807.1:c.56+27C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000384827
  ensembl transcript: ENST00000401833
  gene symbol: TANGO2
  hgvsc: ENST00000401833.1:c.-35C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000484373
  gene symbol: TANGO2
  hgvsc: ENST00000484373.1:n.95+27C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000382706
  ensembl transcript: ENST00000399807
  gene symbol: TANGO2
  hgvsc: ENST00000399807.3:c.-35C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000396182
  ensembl transcript: ENST00000420290
  gene symbol: TANGO2
  hgvsc: ENST00000420290.2:c.-124+27C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000479679
  gene symbol: TANGO2
  hgvsc: ENST00000479679.1:n.220+27C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000389797
  ensembl transcript: ENST00000447208
  gene symbol: TANGO2
  hgvsc: ENST00000447208.2:c.56+27C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000391262
  ensembl transcript: ENST00000434570
  gene symbol: TANGO2
  hgvsc: ENST00000434570.2:c.-35C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000471707
  gene symbol: TANGO2
  hgvsc: ENST00000471707.1:n.274+27C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000385662
  ensembl transcript: ENST00000401886
  gene symbol: TANGO2
  hgvsc: ENST00000401886.1:c.56+27C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000475446
  gene symbol: TANGO2
  hgvsc: ENST00000475446.1:n.257+27C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000411602
  ensembl transcript: ENST00000434168
  gene symbol: TANGO2
  hgvsc: ENST00000434168.1:c.56+27C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000462579
  gene symbol: TANGO2
  hgvsc: ENST00000462579.1:n.96+27C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000395816
  ensembl transcript: ENST00000444651
  gene symbol: TANGO2
  hgvsc: ENST00000444651.1:c.56+27C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000411907
  gene symbol: TANGO2
  hgvsc: ENST00000411907.1:n.161+27C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000381122
  ensembl transcript: ENST00000398042
  gene symbol: TANGO2
  hgvsc: ENST00000398042.2:c.56+27C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000332721
  ensembl transcript: ENST00000327374
  gene symbol: TANGO2
  hgvsc: ENST00000327374.4:c.56+27C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000402926
  ensembl transcript: ENST00000432883
  gene symbol: TANGO2
  hgvsc: ENST00000432883.1:c.56+27C>T
  variant of: http://identifiers.org/hgnc/25439
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 2
population: European (Finnish)
population: Other
population: African
population: Latino
population: South Asian
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum

22-20024405-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20024405
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 20024405
    reference: chr 22
allele count: 9
allele frequency: 7.417541661859001e-5
allele num: 121334
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000471707
  gene symbol: TANGO2
  hgvsc: ENST00000471707.1:n.274+28G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000391262
  ensembl transcript: ENST00000434570
  gene symbol: TANGO2
  hgvsc: ENST00000434570.2:c.-34G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000381122
  ensembl transcript: ENST00000398042
  gene symbol: TANGO2
  hgvsc: ENST00000398042.2:c.56+28G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000475446
  gene symbol: TANGO2
  hgvsc: ENST00000475446.1:n.257+28G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000385662
  ensembl transcript: ENST00000401886
  gene symbol: TANGO2
  hgvsc: ENST00000401886.1:c.56+28G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000479679
  gene symbol: TANGO2
  hgvsc: ENST00000479679.1:n.220+28G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000462579
  gene symbol: TANGO2
  hgvsc: ENST00000462579.1:n.96+28G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000411602
  ensembl transcript: ENST00000434168
  gene symbol: TANGO2
  hgvsc: ENST00000434168.1:c.56+28G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000415450
  ensembl transcript: ENST00000450664
  gene symbol: TANGO2
  hgvsc: ENST00000450664.1:c.56+28G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000384827
  ensembl transcript: ENST00000401833
  gene symbol: TANGO2
  hgvsc: ENST00000401833.1:c.-34G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000411907
  gene symbol: TANGO2
  hgvsc: ENST00000411907.1:n.161+28G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000389797
  ensembl transcript: ENST00000447208
  gene symbol: TANGO2
  hgvsc: ENST00000447208.2:c.56+28G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000413850
  ensembl transcript: ENST00000432198
  gene symbol: TANGO2
  hgvsc: ENST00000432198.1:c.56+28G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000382706
  ensembl transcript: ENST00000399807
  gene symbol: TANGO2
  hgvsc: ENST00000399807.3:c.-34G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000396182
  ensembl transcript: ENST00000420290
  gene symbol: TANGO2
  hgvsc: ENST00000420290.2:c.-124+28G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000395816
  ensembl transcript: ENST00000444651
  gene symbol: TANGO2
  hgvsc: ENST00000444651.1:c.56+28G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000332721
  ensembl transcript: ENST00000327374
  gene symbol: TANGO2
  hgvsc: ENST00000327374.4:c.56+28G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000403432
  ensembl transcript: ENST00000430807
  gene symbol: TANGO2
  hgvsc: ENST00000430807.1:c.56+28G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000485715
  gene symbol: TANGO2
  hgvsc: ENST00000485715.2:n.95+28G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000402966
  ensembl transcript: ENST00000450019
  gene symbol: TANGO2
  hgvsc: ENST00000450019.1:c.56+28G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000484373
  gene symbol: TANGO2
  hgvsc: ENST00000484373.1:n.95+28G>A
  variant of: http://identifiers.org/hgnc/25439
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
population: Other
population: African
population: European (Non-Finnish)
reference allele: G
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum

22-20024406-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20024406
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 20024406
    reference: chr 22
allele count: 1
allele frequency: 8.241577108195424e-6
allele num: 121336
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000381122
  ensembl transcript: ENST00000398042
  gene symbol: TANGO2
  hgvsc: ENST00000398042.2:c.56+29C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000462579
  gene symbol: TANGO2
  hgvsc: ENST00000462579.1:n.96+29C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000382706
  ensembl transcript: ENST00000399807
  gene symbol: TANGO2
  hgvsc: ENST00000399807.3:c.-33C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000471707
  gene symbol: TANGO2
  hgvsc: ENST00000471707.1:n.274+29C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000475446
  gene symbol: TANGO2
  hgvsc: ENST00000475446.1:n.257+29C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000402966
  ensembl transcript: ENST00000450019
  gene symbol: TANGO2
  hgvsc: ENST00000450019.1:c.56+29C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000395816
  ensembl transcript: ENST00000444651
  gene symbol: TANGO2
  hgvsc: ENST00000444651.1:c.56+29C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000402926
  ensembl transcript: ENST00000432883
  gene symbol: TANGO2
  hgvsc: ENST00000432883.1:c.56+29C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000391262
  ensembl transcript: ENST00000434570
  gene symbol: TANGO2
  hgvsc: ENST00000434570.2:c.-33C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000411602
  ensembl transcript: ENST00000434168
  gene symbol: TANGO2
  hgvsc: ENST00000434168.1:c.56+29C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000485715
  gene symbol: TANGO2
  hgvsc: ENST00000485715.2:n.95+29C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000479679
  gene symbol: TANGO2
  hgvsc: ENST00000479679.1:n.220+29C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000332721
  ensembl transcript: ENST00000327374
  gene symbol: TANGO2
  hgvsc: ENST00000327374.4:c.56+29C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000384827
  ensembl transcript: ENST00000401833
  gene symbol: TANGO2
  hgvsc: ENST00000401833.1:c.-33C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000415450
  ensembl transcript: ENST00000450664
  gene symbol: TANGO2
  hgvsc: ENST00000450664.1:c.56+29C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000411907
  gene symbol: TANGO2
  hgvsc: ENST00000411907.1:n.161+29C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000396182
  ensembl transcript: ENST00000420290
  gene symbol: TANGO2
  hgvsc: ENST00000420290.2:c.-124+29C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000385662
  ensembl transcript: ENST00000401886
  gene symbol: TANGO2
  hgvsc: ENST00000401886.1:c.56+29C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000413850
  ensembl transcript: ENST00000432198
  gene symbol: TANGO2
  hgvsc: ENST00000432198.1:c.56+29C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000389797
  ensembl transcript: ENST00000447208
  gene symbol: TANGO2
  hgvsc: ENST00000447208.2:c.56+29C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000403432
  ensembl transcript: ENST00000430807
  gene symbol: TANGO2
  hgvsc: ENST00000430807.1:c.56+29C>T
  variant of: http://identifiers.org/hgnc/25439
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: African
population: South Asian
population: Latino
population: East Asian
reference allele: C
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: QD
site quality: VQSLOD

22-20024408-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20024408
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 20024408
    reference: chr 22
allele count: 1
allele frequency: 8.242935804015958e-6
allele num: 121316
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000382706
  ensembl transcript: ENST00000399807
  gene symbol: TANGO2
  hgvsc: ENST00000399807.3:c.-31C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000391262
  ensembl transcript: ENST00000434570
  gene symbol: TANGO2
  hgvsc: ENST00000434570.2:c.-31C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000402966
  ensembl transcript: ENST00000450019
  gene symbol: TANGO2
  hgvsc: ENST00000450019.1:c.56+31C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000411907
  gene symbol: TANGO2
  hgvsc: ENST00000411907.1:n.161+31C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000484373
  gene symbol: TANGO2
  hgvsc: ENST00000484373.1:n.95+31C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000384827
  ensembl transcript: ENST00000401833
  gene symbol: TANGO2
  hgvsc: ENST00000401833.1:c.-31C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000332721
  ensembl transcript: ENST00000327374
  gene symbol: TANGO2
  hgvsc: ENST00000327374.4:c.56+31C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000479679
  gene symbol: TANGO2
  hgvsc: ENST00000479679.1:n.220+31C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000411602
  ensembl transcript: ENST00000434168
  gene symbol: TANGO2
  hgvsc: ENST00000434168.1:c.56+31C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000395816
  ensembl transcript: ENST00000444651
  gene symbol: TANGO2
  hgvsc: ENST00000444651.1:c.56+31C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000413850
  ensembl transcript: ENST00000432198
  gene symbol: TANGO2
  hgvsc: ENST00000432198.1:c.56+31C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000381122
  ensembl transcript: ENST00000398042
  gene symbol: TANGO2
  hgvsc: ENST00000398042.2:c.56+31C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000475446
  gene symbol: TANGO2
  hgvsc: ENST00000475446.1:n.257+31C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000402926
  ensembl transcript: ENST00000432883
  gene symbol: TANGO2
  hgvsc: ENST00000432883.1:c.56+31C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000462579
  gene symbol: TANGO2
  hgvsc: ENST00000462579.1:n.96+31C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000385662
  ensembl transcript: ENST00000401886
  gene symbol: TANGO2
  hgvsc: ENST00000401886.1:c.56+31C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000415450
  ensembl transcript: ENST00000450664
  gene symbol: TANGO2
  hgvsc: ENST00000450664.1:c.56+31C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000389797
  ensembl transcript: ENST00000447208
  gene symbol: TANGO2
  hgvsc: ENST00000447208.2:c.56+31C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000485715
  gene symbol: TANGO2
  hgvsc: ENST00000485715.2:n.95+31C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000396182
  ensembl transcript: ENST00000420290
  gene symbol: TANGO2
  hgvsc: ENST00000420290.2:c.-124+31C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000471707
  gene symbol: TANGO2
  hgvsc: ENST00000471707.1:n.274+31C>T
  variant of: http://identifiers.org/hgnc/25439
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: DP

22-20024409-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20024409
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 20024409
    reference: chr 22
allele count: 1
allele frequency: 8.242664029014178e-6
allele num: 121320
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000415450
  ensembl transcript: ENST00000450664
  gene symbol: TANGO2
  hgvsc: ENST00000450664.1:c.56+32T>C
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000384827
  ensembl transcript: ENST00000401833
  gene symbol: TANGO2
  hgvsc: ENST00000401833.1:c.-30T>C
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000484373
  gene symbol: TANGO2
  hgvsc: ENST00000484373.1:n.95+32T>C
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000462579
  gene symbol: TANGO2
  hgvsc: ENST00000462579.1:n.96+32T>C
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000389797
  ensembl transcript: ENST00000447208
  gene symbol: TANGO2
  hgvsc: ENST00000447208.2:c.56+32T>C
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000402966
  ensembl transcript: ENST00000450019
  gene symbol: TANGO2
  hgvsc: ENST00000450019.1:c.56+32T>C
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000471707
  gene symbol: TANGO2
  hgvsc: ENST00000471707.1:n.274+32T>C
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000391262
  ensembl transcript: ENST00000434570
  gene symbol: TANGO2
  hgvsc: ENST00000434570.2:c.-30T>C
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000402926
  ensembl transcript: ENST00000432883
  gene symbol: TANGO2
  hgvsc: ENST00000432883.1:c.56+32T>C
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000396182
  ensembl transcript: ENST00000420290
  gene symbol: TANGO2
  hgvsc: ENST00000420290.2:c.-124+32T>C
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000403432
  ensembl transcript: ENST00000430807
  gene symbol: TANGO2
  hgvsc: ENST00000430807.1:c.56+32T>C
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000382706
  ensembl transcript: ENST00000399807
  gene symbol: TANGO2
  hgvsc: ENST00000399807.3:c.-30T>C
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000411907
  gene symbol: TANGO2
  hgvsc: ENST00000411907.1:n.161+32T>C
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000395816
  ensembl transcript: ENST00000444651
  gene symbol: TANGO2
  hgvsc: ENST00000444651.1:c.56+32T>C
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000475446
  gene symbol: TANGO2
  hgvsc: ENST00000475446.1:n.257+32T>C
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000479679
  gene symbol: TANGO2
  hgvsc: ENST00000479679.1:n.220+32T>C
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000381122
  ensembl transcript: ENST00000398042
  gene symbol: TANGO2
  hgvsc: ENST00000398042.2:c.56+32T>C
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000385662
  ensembl transcript: ENST00000401886
  gene symbol: TANGO2
  hgvsc: ENST00000401886.1:c.56+32T>C
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000485715
  gene symbol: TANGO2
  hgvsc: ENST00000485715.2:n.95+32T>C
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000413850
  ensembl transcript: ENST00000432198
  gene symbol: TANGO2
  hgvsc: ENST00000432198.1:c.56+32T>C
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000332721
  ensembl transcript: ENST00000327374
  gene symbol: TANGO2
  hgvsc: ENST00000327374.4:c.56+32T>C
  variant of: http://identifiers.org/hgnc/25439
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: African
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum

22-20024414-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20024414
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 20024414
    reference: chr 22
allele count: 1
allele frequency: 8.244294947896055e-6
allele num: 121296
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000462579
  gene symbol: TANGO2
  hgvsc: ENST00000462579.1:n.96+37G>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000415450
  ensembl transcript: ENST00000450664
  gene symbol: TANGO2
  hgvsc: ENST00000450664.1:c.56+37G>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000484373
  gene symbol: TANGO2
  hgvsc: ENST00000484373.1:n.95+37G>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000381122
  ensembl transcript: ENST00000398042
  gene symbol: TANGO2
  hgvsc: ENST00000398042.2:c.56+37G>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000384827
  ensembl transcript: ENST00000401833
  gene symbol: TANGO2
  hgvsc: ENST00000401833.1:c.-25G>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000389797
  ensembl transcript: ENST00000447208
  gene symbol: TANGO2
  hgvsc: ENST00000447208.2:c.56+37G>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000382706
  ensembl transcript: ENST00000399807
  gene symbol: TANGO2
  hgvsc: ENST00000399807.3:c.-25G>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000391262
  ensembl transcript: ENST00000434570
  gene symbol: TANGO2
  hgvsc: ENST00000434570.2:c.-25G>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000395816
  ensembl transcript: ENST00000444651
  gene symbol: TANGO2
  hgvsc: ENST00000444651.1:c.56+37G>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000485715
  gene symbol: TANGO2
  hgvsc: ENST00000485715.2:n.95+37G>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000396182
  ensembl transcript: ENST00000420290
  gene symbol: TANGO2
  hgvsc: ENST00000420290.2:c.-124+37G>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000413850
  ensembl transcript: ENST00000432198
  gene symbol: TANGO2
  hgvsc: ENST00000432198.1:c.56+37G>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000402966
  ensembl transcript: ENST00000450019
  gene symbol: TANGO2
  hgvsc: ENST00000450019.1:c.56+37G>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000403432
  ensembl transcript: ENST00000430807
  gene symbol: TANGO2
  hgvsc: ENST00000430807.1:c.56+37G>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000479679
  gene symbol: TANGO2
  hgvsc: ENST00000479679.1:n.220+37G>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000475446
  gene symbol: TANGO2
  hgvsc: ENST00000475446.1:n.257+37G>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000402926
  ensembl transcript: ENST00000432883
  gene symbol: TANGO2
  hgvsc: ENST00000432883.1:c.56+37G>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000471707
  gene symbol: TANGO2
  hgvsc: ENST00000471707.1:n.274+37G>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000411602
  ensembl transcript: ENST00000434168
  gene symbol: TANGO2
  hgvsc: ENST00000434168.1:c.56+37G>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000332721
  ensembl transcript: ENST00000327374
  gene symbol: TANGO2
  hgvsc: ENST00000327374.4:c.56+37G>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000411907
  gene symbol: TANGO2
  hgvsc: ENST00000411907.1:n.161+37G>T
  variant of: http://identifiers.org/hgnc/25439
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Latino
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum

22-20024417-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20024417
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 20024417
    reference: chr 22
allele count: 21
allele frequency: 1.731530343007916e-4
allele num: 121280
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000411907
  gene symbol: TANGO2
  hgvsc: ENST00000411907.1:n.161+40C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000413850
  ensembl transcript: ENST00000432198
  gene symbol: TANGO2
  hgvsc: ENST00000432198.1:c.56+40C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000332721
  ensembl transcript: ENST00000327374
  gene symbol: TANGO2
  hgvsc: ENST00000327374.4:c.56+40C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000395816
  ensembl transcript: ENST00000444651
  gene symbol: TANGO2
  hgvsc: ENST00000444651.1:c.56+40C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000462579
  gene symbol: TANGO2
  hgvsc: ENST00000462579.1:n.96+40C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000382706
  ensembl transcript: ENST00000399807
  gene symbol: TANGO2
  hgvsc: ENST00000399807.3:c.-22C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000389797
  ensembl transcript: ENST00000447208
  gene symbol: TANGO2
  hgvsc: ENST00000447208.2:c.56+40C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000411602
  ensembl transcript: ENST00000434168
  gene symbol: TANGO2
  hgvsc: ENST00000434168.1:c.56+40C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000402926
  ensembl transcript: ENST00000432883
  gene symbol: TANGO2
  hgvsc: ENST00000432883.1:c.56+40C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000384827
  ensembl transcript: ENST00000401833
  gene symbol: TANGO2
  hgvsc: ENST00000401833.1:c.-22C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000391262
  ensembl transcript: ENST00000434570
  gene symbol: TANGO2
  hgvsc: ENST00000434570.2:c.-22C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000396182
  ensembl transcript: ENST00000420290
  gene symbol: TANGO2
  hgvsc: ENST00000420290.2:c.-124+40C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000475446
  gene symbol: TANGO2
  hgvsc: ENST00000475446.1:n.257+40C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000479679
  gene symbol: TANGO2
  hgvsc: ENST00000479679.1:n.220+40C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000415450
  ensembl transcript: ENST00000450664
  gene symbol: TANGO2
  hgvsc: ENST00000450664.1:c.56+40C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000471707
  gene symbol: TANGO2
  hgvsc: ENST00000471707.1:n.274+40C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000385662
  ensembl transcript: ENST00000401886
  gene symbol: TANGO2
  hgvsc: ENST00000401886.1:c.56+40C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000403432
  ensembl transcript: ENST00000430807
  gene symbol: TANGO2
  hgvsc: ENST00000430807.1:c.56+40C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000381122
  ensembl transcript: ENST00000398042
  gene symbol: TANGO2
  hgvsc: ENST00000398042.2:c.56+40C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000485715
  gene symbol: TANGO2
  hgvsc: ENST00000485715.2:n.95+40C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000402966
  ensembl transcript: ENST00000450019
  gene symbol: TANGO2
  hgvsc: ENST00000450019.1:c.56+40C>T
  variant of: http://identifiers.org/hgnc/25439
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: African
population: Other
reference allele: C
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: QD

22-20024427-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20024427
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 20024427
    reference: chr 22
allele count: 1
allele frequency: 8.249327679794096e-6
allele num: 121222
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000402966
  ensembl transcript: ENST00000450019
  gene symbol: TANGO2
  hgvsc: ENST00000450019.1:c.56+50C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000402926
  ensembl transcript: ENST00000432883
  gene symbol: TANGO2
  hgvsc: ENST00000432883.1:c.56+50C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000395816
  ensembl transcript: ENST00000444651
  gene symbol: TANGO2
  hgvsc: ENST00000444651.1:c.56+50C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000389797
  ensembl transcript: ENST00000447208
  gene symbol: TANGO2
  hgvsc: ENST00000447208.2:c.56+50C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000384827
  ensembl transcript: ENST00000401833
  gene symbol: TANGO2
  hgvsc: ENST00000401833.1:c.-12C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000415450
  ensembl transcript: ENST00000450664
  gene symbol: TANGO2
  hgvsc: ENST00000450664.1:c.56+50C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000484373
  gene symbol: TANGO2
  hgvsc: ENST00000484373.1:n.95+50C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000381122
  ensembl transcript: ENST00000398042
  gene symbol: TANGO2
  hgvsc: ENST00000398042.2:c.56+50C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000479679
  gene symbol: TANGO2
  hgvsc: ENST00000479679.1:n.220+50C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000382706
  ensembl transcript: ENST00000399807
  gene symbol: TANGO2
  hgvsc: ENST00000399807.3:c.-12C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000462579
  gene symbol: TANGO2
  hgvsc: ENST00000462579.1:n.96+50C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000471707
  gene symbol: TANGO2
  hgvsc: ENST00000471707.1:n.274+50C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000475446
  gene symbol: TANGO2
  hgvsc: ENST00000475446.1:n.257+50C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000391262
  ensembl transcript: ENST00000434570
  gene symbol: TANGO2
  hgvsc: ENST00000434570.2:c.-12C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000411602
  ensembl transcript: ENST00000434168
  gene symbol: TANGO2
  hgvsc: ENST00000434168.1:c.56+50C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000385662
  ensembl transcript: ENST00000401886
  gene symbol: TANGO2
  hgvsc: ENST00000401886.1:c.56+50C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000413850
  ensembl transcript: ENST00000432198
  gene symbol: TANGO2
  hgvsc: ENST00000432198.1:c.56+50C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000403432
  ensembl transcript: ENST00000430807
  gene symbol: TANGO2
  hgvsc: ENST00000430807.1:c.56+50C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000411907
  gene symbol: TANGO2
  hgvsc: ENST00000411907.1:n.161+50C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000332721
  ensembl transcript: ENST00000327374
  gene symbol: TANGO2
  hgvsc: ENST00000327374.4:c.56+50C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000485715
  gene symbol: TANGO2
  hgvsc: ENST00000485715.2:n.95+50C>T
  variant of: http://identifiers.org/hgnc/25439
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: African
population: Latino
population: Other
population: South Asian
population: European (Finnish)
reference allele: C
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ

22-20024433-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20024433
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 20024433
    reference: chr 22
allele count: 1
allele frequency: 8.253685270473266e-6
allele num: 121158
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000402926
  ensembl transcript: ENST00000432883
  gene symbol: TANGO2
  hgvsc: ENST00000432883.1:c.56+56G>C
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000384827
  ensembl transcript: ENST00000401833
  gene symbol: TANGO2
  hgvsc: ENST00000401833.1:c.-6G>C
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000475446
  gene symbol: TANGO2
  hgvsc: ENST00000475446.1:n.257+56G>C
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000411907
  gene symbol: TANGO2
  hgvsc: ENST00000411907.1:n.161+56G>C
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000402966
  ensembl transcript: ENST00000450019
  gene symbol: TANGO2
  hgvsc: ENST00000450019.1:c.56+56G>C
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000389797
  ensembl transcript: ENST00000447208
  gene symbol: TANGO2
  hgvsc: ENST00000447208.2:c.56+56G>C
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000411602
  ensembl transcript: ENST00000434168
  gene symbol: TANGO2
  hgvsc: ENST00000434168.1:c.56+56G>C
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000415450
  ensembl transcript: ENST00000450664
  gene symbol: TANGO2
  hgvsc: ENST00000450664.1:c.56+56G>C
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000479679
  gene symbol: TANGO2
  hgvsc: ENST00000479679.1:n.220+56G>C
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000413850
  ensembl transcript: ENST00000432198
  gene symbol: TANGO2
  hgvsc: ENST00000432198.1:c.56+56G>C
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000382706
  ensembl transcript: ENST00000399807
  gene symbol: TANGO2
  hgvsc: ENST00000399807.3:c.-6G>C
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000391262
  ensembl transcript: ENST00000434570
  gene symbol: TANGO2
  hgvsc: ENST00000434570.2:c.-6G>C
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000395816
  ensembl transcript: ENST00000444651
  gene symbol: TANGO2
  hgvsc: ENST00000444651.1:c.56+56G>C
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000332721
  ensembl transcript: ENST00000327374
  gene symbol: TANGO2
  hgvsc: ENST00000327374.4:c.56+56G>C
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000381122
  ensembl transcript: ENST00000398042
  gene symbol: TANGO2
  hgvsc: ENST00000398042.2:c.56+56G>C
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000484373
  gene symbol: TANGO2
  hgvsc: ENST00000484373.1:n.95+56G>C
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000385662
  ensembl transcript: ENST00000401886
  gene symbol: TANGO2
  hgvsc: ENST00000401886.1:c.56+56G>C
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000396182
  ensembl transcript: ENST00000420290
  gene symbol: TANGO2
  hgvsc: ENST00000420290.2:c.-124+56G>C
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000462579
  gene symbol: TANGO2
  hgvsc: ENST00000462579.1:n.96+56G>C
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000485715
  gene symbol: TANGO2
  hgvsc: ENST00000485715.2:n.95+56G>C
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000471707
  gene symbol: TANGO2
  hgvsc: ENST00000471707.1:n.274+56G>C
  variant of: http://identifiers.org/hgnc/25439
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: Latino
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: G
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: MQ

22-20024438-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20024438
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 20024438
    reference: chr 22
allele count: 74
allele frequency: 6.115197091149492e-4
allele num: 121010
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000332721
  ensembl transcript: ENST00000327374
  gene symbol: TANGO2
  hgvsc: ENST00000327374.4:c.56+61C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000415450
  ensembl transcript: ENST00000450664
  gene symbol: TANGO2
  hgvsc: ENST00000450664.1:c.56+61C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000485715
  gene symbol: TANGO2
  hgvsc: ENST00000485715.2:n.95+61C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000381122
  ensembl transcript: ENST00000398042
  gene symbol: TANGO2
  hgvsc: ENST00000398042.2:c.56+61C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000384827
  ensembl transcript: ENST00000401833
  gene symbol: TANGO2
  hgvsc: ENST00000401833.1:c.-1C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000402926
  ensembl transcript: ENST00000432883
  gene symbol: TANGO2
  hgvsc: ENST00000432883.1:c.56+61C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000475446
  gene symbol: TANGO2
  hgvsc: ENST00000475446.1:n.257+61C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000389797
  ensembl transcript: ENST00000447208
  gene symbol: TANGO2
  hgvsc: ENST00000447208.2:c.56+61C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000479679
  gene symbol: TANGO2
  hgvsc: ENST00000479679.1:n.220+61C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000395816
  ensembl transcript: ENST00000444651
  gene symbol: TANGO2
  hgvsc: ENST00000444651.1:c.56+61C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000385662
  ensembl transcript: ENST00000401886
  gene symbol: TANGO2
  hgvsc: ENST00000401886.1:c.56+61C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000402966
  ensembl transcript: ENST00000450019
  gene symbol: TANGO2
  hgvsc: ENST00000450019.1:c.56+61C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000396182
  ensembl transcript: ENST00000420290
  gene symbol: TANGO2
  hgvsc: ENST00000420290.2:c.-124+61C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000382706
  ensembl transcript: ENST00000399807
  gene symbol: TANGO2
  hgvsc: ENST00000399807.3:c.-1C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000471707
  gene symbol: TANGO2
  hgvsc: ENST00000471707.1:n.274+61C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000413850
  ensembl transcript: ENST00000432198
  gene symbol: TANGO2
  hgvsc: ENST00000432198.1:c.56+61C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000462579
  gene symbol: TANGO2
  hgvsc: ENST00000462579.1:n.96+61C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000391262
  ensembl transcript: ENST00000434570
  gene symbol: TANGO2
  hgvsc: ENST00000434570.2:c.-1C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000411907
  gene symbol: TANGO2
  hgvsc: ENST00000411907.1:n.161+61C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000484373
  gene symbol: TANGO2
  hgvsc: ENST00000484373.1:n.95+61C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000403432
  ensembl transcript: ENST00000430807
  gene symbol: TANGO2
  hgvsc: ENST00000430807.1:c.56+61C>T
  variant of: http://identifiers.org/hgnc/25439
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 1
population: Latino
population: Other
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: C
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: ClippingRankSum

22-20024441-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20024441
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 20024441
    reference: chr 22
allele count: 2
allele frequency: 1.65338447802652e-5
allele num: 120964
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000471707
  gene symbol: TANGO2
  hgvsc: ENST00000471707.1:n.274+64G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000415450
  ensembl transcript: ENST00000450664
  gene symbol: TANGO2
  hgvsc: ENST00000450664.1:c.56+64G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: start_lost
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000391262
  ensembl transcript: ENST00000434570
  gene symbol: TANGO2
  hgvsc: ENST00000434570.2:c.3G>A
  hgvsp: ENSP00000391262.2:p.Met1?
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000479679
  gene symbol: TANGO2
  hgvsc: ENST00000479679.1:n.220+64G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000332721
  ensembl transcript: ENST00000327374
  gene symbol: TANGO2
  hgvsc: ENST00000327374.4:c.56+64G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000396182
  ensembl transcript: ENST00000420290
  gene symbol: TANGO2
  hgvsc: ENST00000420290.2:c.-124+64G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: start_lost
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000382706
  ensembl transcript: ENST00000399807
  gene symbol: TANGO2
  hgvsc: ENST00000399807.3:c.3G>A
  hgvsp: ENSP00000382706.3:p.Met1?
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000413850
  ensembl transcript: ENST00000432198
  gene symbol: TANGO2
  hgvsc: ENST00000432198.1:c.56+64G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000395816
  ensembl transcript: ENST00000444651
  gene symbol: TANGO2
  hgvsc: ENST00000444651.1:c.56+64G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000402926
  ensembl transcript: ENST00000432883
  gene symbol: TANGO2
  hgvsc: ENST00000432883.1:c.56+64G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000475446
  gene symbol: TANGO2
  hgvsc: ENST00000475446.1:n.257+64G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: start_lost
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000384827
  ensembl transcript: ENST00000401833
  gene symbol: TANGO2
  hgvsc: ENST00000401833.1:c.3G>A
  hgvsp: ENSP00000384827.1:p.Met1?
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000411907
  gene symbol: TANGO2
  hgvsc: ENST00000411907.1:n.161+64G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000389797
  ensembl transcript: ENST00000447208
  gene symbol: TANGO2
  hgvsc: ENST00000447208.2:c.56+64G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000485715
  gene symbol: TANGO2
  hgvsc: ENST00000485715.2:n.95+64G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000385662
  ensembl transcript: ENST00000401886
  gene symbol: TANGO2
  hgvsc: ENST00000401886.1:c.56+64G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000381122
  ensembl transcript: ENST00000398042
  gene symbol: TANGO2
  hgvsc: ENST00000398042.2:c.56+64G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000462579
  gene symbol: TANGO2
  hgvsc: ENST00000462579.1:n.96+64G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000484373
  gene symbol: TANGO2
  hgvsc: ENST00000484373.1:n.95+64G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000402966
  ensembl transcript: ENST00000450019
  gene symbol: TANGO2
  hgvsc: ENST00000450019.1:c.56+64G>A
  variant of: http://identifiers.org/hgnc/25439
canonical: false
consequence: start lost
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Met1?
num of homozygotes: 0
population: Other
population: South Asian
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
population: European (Finnish)
reference allele: G
site quality: FS
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ

22-20024460-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20024460
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 20024460
    reference: chr 22
allele count: 10
allele frequency: 8.324731111185108e-5
allele num: 120124
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000484373
  gene symbol: TANGO2
  hgvsc: ENST00000484373.1:n.95+83G>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000479679
  gene symbol: TANGO2
  hgvsc: ENST00000479679.1:n.220+83G>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000403432
  ensembl transcript: ENST00000430807
  gene symbol: TANGO2
  hgvsc: ENST00000430807.1:c.56+83G>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000485715
  gene symbol: TANGO2
  hgvsc: ENST00000485715.2:n.95+83G>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000382706
  ensembl transcript: ENST00000399807
  gene symbol: TANGO2
  hgvsc: ENST00000399807.3:c.22G>T
  hgvsp: ENSP00000382706.3:p.Ala8Ser
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000402966
  ensembl transcript: ENST00000450019
  gene symbol: TANGO2
  hgvsc: ENST00000450019.1:c.56+83G>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000411602
  ensembl transcript: ENST00000434168
  gene symbol: TANGO2
  hgvsc: ENST00000434168.1:c.56+83G>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000396182
  ensembl transcript: ENST00000420290
  gene symbol: TANGO2
  hgvsc: ENST00000420290.2:c.-124+83G>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000413850
  ensembl transcript: ENST00000432198
  gene symbol: TANGO2
  hgvsc: ENST00000432198.1:c.56+83G>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000415450
  ensembl transcript: ENST00000450664
  gene symbol: TANGO2
  hgvsc: ENST00000450664.1:c.56+83G>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000402926
  ensembl transcript: ENST00000432883
  gene symbol: TANGO2
  hgvsc: ENST00000432883.1:c.56+83G>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000462579
  gene symbol: TANGO2
  hgvsc: ENST00000462579.1:n.96+83G>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000411907
  gene symbol: TANGO2
  hgvsc: ENST00000411907.1:n.161+83G>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000475446
  gene symbol: TANGO2
  hgvsc: ENST00000475446.1:n.257+83G>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000391262
  ensembl transcript: ENST00000434570
  gene symbol: TANGO2
  hgvsc: ENST00000434570.2:c.22G>T
  hgvsp: ENSP00000391262.2:p.Ala8Ser
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000332721
  ensembl transcript: ENST00000327374
  gene symbol: TANGO2
  hgvsc: ENST00000327374.4:c.56+83G>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000385662
  ensembl transcript: ENST00000401886
  gene symbol: TANGO2
  hgvsc: ENST00000401886.1:c.56+83G>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000381122
  ensembl transcript: ENST00000398042
  gene symbol: TANGO2
  hgvsc: ENST00000398042.2:c.56+83G>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000389797
  ensembl transcript: ENST00000447208
  gene symbol: TANGO2
  hgvsc: ENST00000447208.2:c.56+83G>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000471707
  gene symbol: TANGO2
  hgvsc: ENST00000471707.1:n.274+83G>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000395816
  ensembl transcript: ENST00000444651
  gene symbol: TANGO2
  hgvsc: ENST00000444651.1:c.56+83G>T
  variant of: http://identifiers.org/hgnc/25439
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Ala8Ser
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: European (Finnish)
population: Latino
population: African
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP

22-20024461-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20024461
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 20024461
    reference: chr 22
allele count: 10
allele frequency: 8.328058896032513e-5
allele num: 120076
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000384827
  ensembl transcript: ENST00000401833
  gene symbol: TANGO2
  hgvsc: ENST00000401833.1:c.23C>T
  hgvsp: ENSP00000384827.1:p.Ala8Val
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000411602
  ensembl transcript: ENST00000434168
  gene symbol: TANGO2
  hgvsc: ENST00000434168.1:c.56+84C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000382706
  ensembl transcript: ENST00000399807
  gene symbol: TANGO2
  hgvsc: ENST00000399807.3:c.23C>T
  hgvsp: ENSP00000382706.3:p.Ala8Val
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000332721
  ensembl transcript: ENST00000327374
  gene symbol: TANGO2
  hgvsc: ENST00000327374.4:c.56+84C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000462579
  gene symbol: TANGO2
  hgvsc: ENST00000462579.1:n.96+84C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000415450
  ensembl transcript: ENST00000450664
  gene symbol: TANGO2
  hgvsc: ENST00000450664.1:c.56+84C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000411907
  gene symbol: TANGO2
  hgvsc: ENST00000411907.1:n.161+84C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000485715
  gene symbol: TANGO2
  hgvsc: ENST00000485715.2:n.95+84C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000475446
  gene symbol: TANGO2
  hgvsc: ENST00000475446.1:n.257+84C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000396182
  ensembl transcript: ENST00000420290
  gene symbol: TANGO2
  hgvsc: ENST00000420290.2:c.-124+84C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000484373
  gene symbol: TANGO2
  hgvsc: ENST00000484373.1:n.95+84C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000471707
  gene symbol: TANGO2
  hgvsc: ENST00000471707.1:n.274+84C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000413850
  ensembl transcript: ENST00000432198
  gene symbol: TANGO2
  hgvsc: ENST00000432198.1:c.56+84C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000402926
  ensembl transcript: ENST00000432883
  gene symbol: TANGO2
  hgvsc: ENST00000432883.1:c.56+84C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000391262
  ensembl transcript: ENST00000434570
  gene symbol: TANGO2
  hgvsc: ENST00000434570.2:c.23C>T
  hgvsp: ENSP00000391262.2:p.Ala8Val
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000395816
  ensembl transcript: ENST00000444651
  gene symbol: TANGO2
  hgvsc: ENST00000444651.1:c.56+84C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000403432
  ensembl transcript: ENST00000430807
  gene symbol: TANGO2
  hgvsc: ENST00000430807.1:c.56+84C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000479679
  gene symbol: TANGO2
  hgvsc: ENST00000479679.1:n.220+84C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000381122
  ensembl transcript: ENST00000398042
  gene symbol: TANGO2
  hgvsc: ENST00000398042.2:c.56+84C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000385662
  ensembl transcript: ENST00000401886
  gene symbol: TANGO2
  hgvsc: ENST00000401886.1:c.56+84C>T
  variant of: http://identifiers.org/hgnc/25439
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Ala8Val
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Latino
population: European (Finnish)
population: African
reference allele: C
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/22-20024462-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20024462
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 20024462
    reference: chr 22
allele count: 1
allele frequency: 8.328891257995735e-6
allele num: 120064
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000411602
  ensembl transcript: ENST00000434168
  gene symbol: TANGO2
  hgvsc: ENST00000434168.1:c.56+85A>C
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000332721
  ensembl transcript: ENST00000327374
  gene symbol: TANGO2
  hgvsc: ENST00000327374.4:c.56+85A>C
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000479679
  gene symbol: TANGO2
  hgvsc: ENST00000479679.1:n.220+85A>C
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000384827
  ensembl transcript: ENST00000401833
  gene symbol: TANGO2
  hgvsc: ENST00000401833.1:c.24A>C
  hgvsp: ENST00000401833.1:c.24A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000413850
  ensembl transcript: ENST00000432198
  gene symbol: TANGO2
  hgvsc: ENST00000432198.1:c.56+85A>C
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000415450
  ensembl transcript: ENST00000450664
  gene symbol: TANGO2
  hgvsc: ENST00000450664.1:c.56+85A>C
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000385662
  ensembl transcript: ENST00000401886
  gene symbol: TANGO2
  hgvsc: ENST00000401886.1:c.56+85A>C
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000484373
  gene symbol: TANGO2
  hgvsc: ENST00000484373.1:n.95+85A>C
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000471707
  gene symbol: TANGO2
  hgvsc: ENST00000471707.1:n.274+85A>C
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000391262
  ensembl transcript: ENST00000434570
  gene symbol: TANGO2
  hgvsc: ENST00000434570.2:c.24A>C
  hgvsp: ENST00000434570.2:c.24A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000396182
  ensembl transcript: ENST00000420290
  gene symbol: TANGO2
  hgvsc: ENST00000420290.2:c.-124+85A>C
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000475446
  gene symbol: TANGO2
  hgvsc: ENST00000475446.1:n.257+85A>C
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000381122
  ensembl transcript: ENST00000398042
  gene symbol: TANGO2
  hgvsc: ENST00000398042.2:c.56+85A>C
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000462579
  gene symbol: TANGO2
  hgvsc: ENST00000462579.1:n.96+85A>C
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000389797
  ensembl transcript: ENST00000447208
  gene symbol: TANGO2
  hgvsc: ENST00000447208.2:c.56+85A>C
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000382706
  ensembl transcript: ENST00000399807
  gene symbol: TANGO2
  hgvsc: ENST00000399807.3:c.24A>C
  hgvsp: ENST00000399807.3:c.24A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000411907
  gene symbol: TANGO2
  hgvsc: ENST00000411907.1:n.161+85A>C
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000402966
  ensembl transcript: ENST00000450019
  gene symbol: TANGO2
  hgvsc: ENST00000450019.1:c.56+85A>C
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000402926
  ensembl transcript: ENST00000432883
  gene symbol: TANGO2
  hgvsc: ENST00000432883.1:c.56+85A>C
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000395816
  ensembl transcript: ENST00000444651
  gene symbol: TANGO2
  hgvsc: ENST00000444651.1:c.56+85A>C
  variant of: http://identifiers.org/hgnc/25439
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Ala8Ala
num of homozygotes: 0
population: East Asian
population: African
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: Latino
reference allele: A
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: ClippingRankSum

22-20024470-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20024470
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 20024470
    reference: chr 22
allele count: 1
allele frequency: 8.380543729677181e-6
allele num: 119324
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000411602
  ensembl transcript: ENST00000434168
  gene symbol: TANGO2
  hgvsc: ENST00000434168.1:c.56+93G>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000395816
  ensembl transcript: ENST00000444651
  gene symbol: TANGO2
  hgvsc: ENST00000444651.1:c.56+93G>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000485715
  gene symbol: TANGO2
  hgvsc: ENST00000485715.2:n.95+93G>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000389797
  ensembl transcript: ENST00000447208
  gene symbol: TANGO2
  hgvsc: ENST00000447208.2:c.56+93G>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000382706
  ensembl transcript: ENST00000399807
  gene symbol: TANGO2
  hgvsc: ENST00000399807.3:c.32G>T
  hgvsp: ENSP00000382706.3:p.Cys11Phe
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000391262
  ensembl transcript: ENST00000434570
  gene symbol: TANGO2
  hgvsc: ENST00000434570.2:c.32G>T
  hgvsp: ENSP00000391262.2:p.Cys11Phe
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000381122
  ensembl transcript: ENST00000398042
  gene symbol: TANGO2
  hgvsc: ENST00000398042.2:c.56+93G>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000396182
  ensembl transcript: ENST00000420290
  gene symbol: TANGO2
  hgvsc: ENST00000420290.2:c.-124+93G>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000411907
  gene symbol: TANGO2
  hgvsc: ENST00000411907.1:n.161+93G>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000475446
  gene symbol: TANGO2
  hgvsc: ENST00000475446.1:n.257+93G>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000462579
  gene symbol: TANGO2
  hgvsc: ENST00000462579.1:n.96+93G>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000332721
  ensembl transcript: ENST00000327374
  gene symbol: TANGO2
  hgvsc: ENST00000327374.4:c.56+93G>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000479679
  gene symbol: TANGO2
  hgvsc: ENST00000479679.1:n.220+93G>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000402926
  ensembl transcript: ENST00000432883
  gene symbol: TANGO2
  hgvsc: ENST00000432883.1:c.56+93G>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000402966
  ensembl transcript: ENST00000450019
  gene symbol: TANGO2
  hgvsc: ENST00000450019.1:c.56+93G>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000403432
  ensembl transcript: ENST00000430807
  gene symbol: TANGO2
  hgvsc: ENST00000430807.1:c.56+93G>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000413850
  ensembl transcript: ENST00000432198
  gene symbol: TANGO2
  hgvsc: ENST00000432198.1:c.56+93G>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000471707
  gene symbol: TANGO2
  hgvsc: ENST00000471707.1:n.274+93G>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000385662
  ensembl transcript: ENST00000401886
  gene symbol: TANGO2
  hgvsc: ENST00000401886.1:c.56+93G>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000384827
  ensembl transcript: ENST00000401833
  gene symbol: TANGO2
  hgvsc: ENST00000401833.1:c.32G>T
  hgvsp: ENSP00000384827.1:p.Cys11Phe
  variant of: http://identifiers.org/hgnc/25439
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Cys11Phe
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Latino
population: South Asian
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: QD

22-20024473-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20024473
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 20024473
    reference: chr 22
allele count: 1
allele frequency: 8.401666890711118e-6
allele num: 119024
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000384827
  ensembl transcript: ENST00000401833
  gene symbol: TANGO2
  hgvsc: ENST00000401833.1:c.35T>G
  hgvsp: ENSP00000384827.1:p.Val12Gly
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000396182
  ensembl transcript: ENST00000420290
  gene symbol: TANGO2
  hgvsc: ENST00000420290.2:c.-124+96T>G
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000395816
  ensembl transcript: ENST00000444651
  gene symbol: TANGO2
  hgvsc: ENST00000444651.1:c.56+96T>G
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000484373
  gene symbol: TANGO2
  hgvsc: ENST00000484373.1:n.95+96T>G
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000471707
  gene symbol: TANGO2
  hgvsc: ENST00000471707.1:n.274+96T>G
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000485715
  gene symbol: TANGO2
  hgvsc: ENST00000485715.2:n.95+96T>G
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000413850
  ensembl transcript: ENST00000432198
  gene symbol: TANGO2
  hgvsc: ENST00000432198.1:c.56+96T>G
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000411907
  gene symbol: TANGO2
  hgvsc: ENST00000411907.1:n.161+96T>G
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000411602
  ensembl transcript: ENST00000434168
  gene symbol: TANGO2
  hgvsc: ENST00000434168.1:c.56+96T>G
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000382706
  ensembl transcript: ENST00000399807
  gene symbol: TANGO2
  hgvsc: ENST00000399807.3:c.35T>G
  hgvsp: ENSP00000382706.3:p.Val12Gly
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000391262
  ensembl transcript: ENST00000434570
  gene symbol: TANGO2
  hgvsc: ENST00000434570.2:c.35T>G
  hgvsp: ENSP00000391262.2:p.Val12Gly
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000389797
  ensembl transcript: ENST00000447208
  gene symbol: TANGO2
  hgvsc: ENST00000447208.2:c.56+96T>G
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000402966
  ensembl transcript: ENST00000450019
  gene symbol: TANGO2
  hgvsc: ENST00000450019.1:c.56+96T>G
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000381122
  ensembl transcript: ENST00000398042
  gene symbol: TANGO2
  hgvsc: ENST00000398042.2:c.56+96T>G
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000462579
  gene symbol: TANGO2
  hgvsc: ENST00000462579.1:n.96+96T>G
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000479679
  gene symbol: TANGO2
  hgvsc: ENST00000479679.1:n.220+96T>G
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000403432
  ensembl transcript: ENST00000430807
  gene symbol: TANGO2
  hgvsc: ENST00000430807.1:c.56+96T>G
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000402926
  ensembl transcript: ENST00000432883
  gene symbol: TANGO2
  hgvsc: ENST00000432883.1:c.56+96T>G
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000332721
  ensembl transcript: ENST00000327374
  gene symbol: TANGO2
  hgvsc: ENST00000327374.4:c.56+96T>G
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000385662
  ensembl transcript: ENST00000401886
  gene symbol: TANGO2
  hgvsc: ENST00000401886.1:c.56+96T>G
  variant of: http://identifiers.org/hgnc/25439
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Val12Gly
num of homozygotes: 0
population: Other
population: East Asian
population: European (Finnish)
population: South Asian
population: African
population: Latino
population: European (Non-Finnish)
reference allele: T
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP

http://identifiers.org/exac.variant/22-20024478-CA-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20024478
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 20024477
    reference: chr 22
allele count: 17
allele frequency: 1.436975926426832e-4
allele num: 118304
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000384827
  ensembl transcript: ENST00000401833
  gene symbol: TANGO2
  hgvsc: ENST00000401833.1:c.41delA
  hgvsp: ENSP00000384827.1:p.Gln14ArgfsTer64
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000381122
  ensembl transcript: ENST00000398042
  gene symbol: TANGO2
  hgvsc: ENST00000398042.2:c.56+102delA
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000484373
  gene symbol: TANGO2
  hgvsc: ENST00000484373.1:n.95+102delA
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000391262
  ensembl transcript: ENST00000434570
  gene symbol: TANGO2
  hgvsc: ENST00000434570.2:c.41delA
  hgvsp: ENSP00000391262.2:p.Gln14ArgfsTer64
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000413850
  ensembl transcript: ENST00000432198
  gene symbol: TANGO2
  hgvsc: ENST00000432198.1:c.56+102delA
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000411907
  gene symbol: TANGO2
  hgvsc: ENST00000411907.1:n.161+102delA
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000396182
  ensembl transcript: ENST00000420290
  gene symbol: TANGO2
  hgvsc: ENST00000420290.2:c.-124+102delA
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000382706
  ensembl transcript: ENST00000399807
  gene symbol: TANGO2
  hgvsc: ENST00000399807.3:c.41delA
  hgvsp: ENSP00000382706.3:p.Gln14ArgfsTer64
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000471707
  gene symbol: TANGO2
  hgvsc: ENST00000471707.1:n.274+102delA
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000479679
  gene symbol: TANGO2
  hgvsc: ENST00000479679.1:n.220+102delA
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000403432
  ensembl transcript: ENST00000430807
  gene symbol: TANGO2
  hgvsc: ENST00000430807.1:c.56+102delA
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000395816
  ensembl transcript: ENST00000444651
  gene symbol: TANGO2
  hgvsc: ENST00000444651.1:c.56+102delA
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000402966
  ensembl transcript: ENST00000450019
  gene symbol: TANGO2
  hgvsc: ENST00000450019.1:c.56+102delA
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000475446
  gene symbol: TANGO2
  hgvsc: ENST00000475446.1:n.257+102delA
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000332721
  ensembl transcript: ENST00000327374
  gene symbol: TANGO2
  hgvsc: ENST00000327374.4:c.56+102delA
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000415450
  ensembl transcript: ENST00000450664
  gene symbol: TANGO2
  hgvsc: ENST00000450664.1:c.56+102delA
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000389797
  ensembl transcript: ENST00000447208
  gene symbol: TANGO2
  hgvsc: ENST00000447208.2:c.56+102delA
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000402926
  ensembl transcript: ENST00000432883
  gene symbol: TANGO2
  hgvsc: ENST00000432883.1:c.56+102delA
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000485715
  gene symbol: TANGO2
  hgvsc: ENST00000485715.2:n.95+102delA
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000385662
  ensembl transcript: ENST00000401886
  gene symbol: TANGO2
  hgvsc: ENST00000401886.1:c.56+102delA
  variant of: http://identifiers.org/hgnc/25439
canonical: false
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Gln14ArgfsTer64
num of homozygotes: 0
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Other
reference allele: CA
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: MQ

22-20024483-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20024483
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 20024483
    reference: chr 22
allele count: 1
allele frequency: 8.487955591016347e-6
allele num: 117814
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000403432
  ensembl transcript: ENST00000430807
  gene symbol: TANGO2
  hgvsc: ENST00000430807.1:c.56+106C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000485715
  gene symbol: TANGO2
  hgvsc: ENST00000485715.2:n.95+106C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000411907
  gene symbol: TANGO2
  hgvsc: ENST00000411907.1:n.161+106C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000475446
  gene symbol: TANGO2
  hgvsc: ENST00000475446.1:n.257+106C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000415450
  ensembl transcript: ENST00000450664
  gene symbol: TANGO2
  hgvsc: ENST00000450664.1:c.56+106C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000396182
  ensembl transcript: ENST00000420290
  gene symbol: TANGO2
  hgvsc: ENST00000420290.2:c.-124+106C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000462579
  gene symbol: TANGO2
  hgvsc: ENST00000462579.1:n.96+106C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000384827
  ensembl transcript: ENST00000401833
  gene symbol: TANGO2
  hgvsc: ENST00000401833.1:c.45C>T
  hgvsp: ENST00000401833.1:c.45C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000411602
  ensembl transcript: ENST00000434168
  gene symbol: TANGO2
  hgvsc: ENST00000434168.1:c.56+106C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000471707
  gene symbol: TANGO2
  hgvsc: ENST00000471707.1:n.274+106C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000395816
  ensembl transcript: ENST00000444651
  gene symbol: TANGO2
  hgvsc: ENST00000444651.1:c.56+106C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000484373
  gene symbol: TANGO2
  hgvsc: ENST00000484373.1:n.95+106C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000389797
  ensembl transcript: ENST00000447208
  gene symbol: TANGO2
  hgvsc: ENST00000447208.2:c.56+106C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000381122
  ensembl transcript: ENST00000398042
  gene symbol: TANGO2
  hgvsc: ENST00000398042.2:c.56+106C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000402966
  ensembl transcript: ENST00000450019
  gene symbol: TANGO2
  hgvsc: ENST00000450019.1:c.56+106C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000479679
  gene symbol: TANGO2
  hgvsc: ENST00000479679.1:n.220+106C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000382706
  ensembl transcript: ENST00000399807
  gene symbol: TANGO2
  hgvsc: ENST00000399807.3:c.45C>T
  hgvsp: ENST00000399807.3:c.45C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000391262
  ensembl transcript: ENST00000434570
  gene symbol: TANGO2
  hgvsc: ENST00000434570.2:c.45C>T
  hgvsp: ENST00000434570.2:c.45C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000413850
  ensembl transcript: ENST00000432198
  gene symbol: TANGO2
  hgvsc: ENST00000432198.1:c.56+106C>T
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000402926
  ensembl transcript: ENST00000432883
  gene symbol: TANGO2
  hgvsc: ENST00000432883.1:c.56+106C>T
  variant of: http://identifiers.org/hgnc/25439
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
hgvs: p.Asp15Asp
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Other
population: South Asian
population: Latino
population: African
population: European (Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum

22-20024484-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 20024484
    reference: chr 22
  end: Position
    type: ExactPosition
    position: 20024484
    reference: chr 22
allele count: 3
allele frequency: 2.546300225771953e-5
allele num: 117818
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000332721
  ensembl transcript: ENST00000327374
  gene symbol: TANGO2
  hgvsc: ENST00000327374.4:c.56+107G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000382706
  ensembl transcript: ENST00000399807
  gene symbol: TANGO2
  hgvsc: ENST00000399807.3:c.46G>A
  hgvsp: ENSP00000382706.3:p.Gly16Arg
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000413850
  ensembl transcript: ENST00000432198
  gene symbol: TANGO2
  hgvsc: ENST00000432198.1:c.56+107G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000381122
  ensembl transcript: ENST00000398042
  gene symbol: TANGO2
  hgvsc: ENST00000398042.2:c.56+107G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl transcript: ENST00000411907
  gene symbol: TANGO2
  hgvsc: ENST00000411907.1:n.161+107G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000402966
  ensembl transcript: ENST00000450019
  gene symbol: TANGO2
  hgvsc: ENST00000450019.1:c.56+107G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000395816
  ensembl transcript: ENST00000444651
  gene symbol: TANGO2
  hgvsc: ENST00000444651.1:c.56+107G>A
  variant of: http://identifiers.org/hgnc/25439
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000183597
  ensembl protein: ENSP00000415450
  ensembl transcript: ENST00000450664
  gene symbol: TANGO2
  hgvsc: ENST00000450664.1:c.56+107G>A
  variant of: http://identifiers.org/hgnc/25439
canonical: false
consequence: missense
filter: PASS
hgvs: p.Gly16Arg
num of homozygotes: 0
reference allele: G

GenotypeDepth
all individuals: 445
bin: 5.25e1
variant carriers: 2

GenotypeDepth
all individuals: 28
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1617
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 947
bin: 4.75e1
variant carriers: 3

GenotypeDepth
all individuals: 12895
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2074
bin: 4.25e1
variant carriers: 1

GenotypeDepth
all individuals: 127
bin: 6.25e1
variant carriers: 0

GenotypeDepth
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bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 245
bin: 5.75e1
variant carriers: 2

GenotypeDepth
all individuals: 4749
bin: 3.75e1
variant carriers: 3

GenotypeDepth
all individuals: 57
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3287
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 107
bin: 5.75e1
variant carriers: 1

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 14

GenotypeQuality
all individuals: 1616
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 512
bin: 3.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10170
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 876
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6098
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11454
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.082725060827251e-5
allele num: 16440
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 13
allele frequency: 1.991543599485263e-4
allele num: 65276
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.878e0

DP
type: SiteQuality
SIO_000300: 1.721667e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.9e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -2.04e-1

FS
type: SiteQuality
SIO_000300: 1.399e0

QD
type: SiteQuality
SIO_000300: 1.149e1

MQ
type: SiteQuality
SIO_000300: 5.965e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 1.39e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.97e0

GenotypeDepth
all individuals: 942
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 27
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 143
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 57
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 24
bin: 7.75e1
variant carriers: 0

GenotypeDepth
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bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 942
bin: 4.75e1
variant carriers: 0

GenotypeDepth
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bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 28
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1882
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 17
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 350
bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3890
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4216
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 183
bin: 5.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16430
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6078
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.533460099368214e-5
allele num: 65212
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10162
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8574
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11442
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.24e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.8e-2

MQRankSum
type: SiteQuality
SIO_000300: -8.599999999999999e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 3.66e0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.338e1

VQSLOD
type: SiteQuality
SIO_000300: 2.74e0

MQ
type: SiteQuality
SIO_000300: 5.964e1

DP
type: SiteQuality
SIO_000300: 1.714057e6

GenotypeDepth
all individuals: 24
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4702
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2066
bin: 4.25e1
variant carriers: 2

GenotypeDepth
all individuals: 88
bin: 6.75e1
variant carriers: 1

GenotypeDepth
all individuals: 944
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 12345
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 127
bin: 6.25e1
variant carriers: 1

GenotypeDepth
all individuals: 28
bin: 8.25e1
variant carriers: 1

GenotypeDepth
all individuals: 57
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 70
bin: 9.75e1
variant carriers: 2

GenotypeDepth
all individuals: 28
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 599
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variant carriers: 0

GenotypeQuality
all individuals: 141
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variant carriers: 0

GenotypeQuality
all individuals: 1611
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variant carriers: 0

GenotypeQuality
all individuals: 1854
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variant carriers: 0

GenotypeQuality
all individuals: 3269
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variant carriers: 0

GenotypeQuality
all individuals: 8487
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variant carriers: 0

GenotypeQuality
all individuals: 2959
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variant carriers: 0

GenotypeQuality
all individuals: 684
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variant carriers: 0

GenotypeQuality
all individuals: 42
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variant carriers: 0

GenotypeQuality
all individuals: 218
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variant carriers: 0

GenotypeQuality
all individuals: 167
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 4200
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 30376
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variant carriers: 0

GenotypeQuality
all individuals: 170
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 3891
bin: 9.75e1
variant carriers: 9

GenotypeQuality
all individuals: 1224
bin: 8.75e1
variant carriers: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.826595226497808e-4
allele num: 16424
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 876
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 2.622377622377622e-4
allele num: 11440
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6058
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10156
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.603486373680334e-5
allele num: 65168
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8572
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.952e1

QD
type: SiteQuality
SIO_000300: 1.258e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.76e0

MQRankSum
type: SiteQuality
SIO_000300: -1.14e-1

FS
type: SiteQuality
SIO_000300: 3.722e0

VQSLOD
type: SiteQuality
SIO_000300: 1.88e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.2e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -6.7e-2

DP
type: SiteQuality
SIO_000300: 1.709175e6

GenotypeDepth
all individuals: 71
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 2146
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 939
bin: 4.75e1
variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
all individuals: 87
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
all individuals: 17
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variant carriers: 0

GenotypeDepth
all individuals: 28
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variant carriers: 0

GenotypeDepth
all individuals: 12519
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variant carriers: 0

GenotypeDepth
all individuals: 244
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variant carriers: 1

GenotypeQuality
all individuals: 617
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variant carriers: 0

GenotypeQuality
all individuals: 142
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variant carriers: 0

GenotypeQuality
all individuals: 444
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 183
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variant carriers: 0

GenotypeQuality
all individuals: 1610
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 185
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variant carriers: 0

GenotypeQuality
all individuals: 8455
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variant carriers: 0

GenotypeQuality
all individuals: 3882
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variant carriers: 2

GenotypeQuality
all individuals: 4192
bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.217878455730118e-4
allele num: 16422
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10148
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8568
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11430
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65148
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6054
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.72e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.11e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.38e0

MQ
type: SiteQuality
SIO_000300: 5.967e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.91e-1

DP
type: SiteQuality
SIO_000300: 1.705781e6

QD
type: SiteQuality
SIO_000300: 1.06e1

FS
type: SiteQuality
SIO_000300: 5.147e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.3e-3

VQSLOD
type: SiteQuality
SIO_000300: 8.61e-1

GenotypeDepth
all individuals: 2058
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 87
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2369
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 57
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variant carriers: 0

GenotypeDepth
all individuals: 442
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variant carriers: 0

GenotypeDepth
all individuals: 71
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GenotypeDepth
all individuals: 125
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GenotypeDepth
all individuals: 28
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GenotypeDepth
all individuals: 4646
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variant carriers: 0

GenotypeDepth
all individuals: 12370
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variant carriers: 0

GenotypeDepth
all individuals: 24
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GenotypeQuality
all individuals: 676
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 29877
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4183
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.756567425569177e-5
allele num: 11420
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10148
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65110
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.093102607847916e-5
allele num: 16412
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6034
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8564
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.698626e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.47e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.7e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.63e0

MQRankSum
type: SiteQuality
SIO_000300: -7.47e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -2.907e0

QD
type: SiteQuality
SIO_000300: 2.659e1

GenotypeDepth
all individuals: 22336
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 12268
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variant carriers: 0

GenotypeDepth
all individuals: 242
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variant carriers: 0

GenotypeDepth
all individuals: 1064
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variant carriers: 0

GenotypeDepth
all individuals: 170
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variant carriers: 0

GenotypeDepth
all individuals: 123
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variant carriers: 1

GenotypeDepth
all individuals: 89
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variant carriers: 1

GenotypeDepth
all individuals: 28
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variant carriers: 0

GenotypeDepth
all individuals: 57
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variant carriers: 0

GenotypeDepth
all individuals: 12395
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variant carriers: 0

GenotypeDepth
all individuals: 28
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variant carriers: 0

GenotypeQuality
all individuals: 226
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GenotypeQuality
all individuals: 20
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GenotypeQuality
all individuals: 574
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variant carriers: 0

GenotypeQuality
all individuals: 164
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variant carriers: 0

GenotypeQuality
all individuals: 254
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variant carriers: 0

GenotypeQuality
all individuals: 1216
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variant carriers: 0

GenotypeQuality
all individuals: 2073
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variant carriers: 0

GenotypeQuality
all individuals: 928
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variant carriers: 0

GenotypeQuality
all individuals: 3889
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variant carriers: 2

GenotypeQuality
all individuals: 2929
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variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 1.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11410
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8564
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.536759282026063e-5
allele num: 65072
num of homozygotes: 0

African
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allele count: 1
allele frequency: 9.856100926473487e-5
allele num: 10146
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.951e1

MQRankSum
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SIO_000300: 2.07e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.05e-1

InbreedingCoeff
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SIO_000300: 8.0e-4

DP
type: SiteQuality
SIO_000300: 1.694391e6

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.321e1

VQSLOD
type: SiteQuality
SIO_000300: 4.75e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.62e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.44e-1

GenotypeDepth
all individuals: 123
bin: 6.25e1
variant carriers: 1

GenotypeDepth
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variant carriers: 1

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 2

Latino
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allele count: 4
allele frequency: 3.5056967572305e-4
allele num: 11410
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.856100926473487e-5
allele num: 10146
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 45
allele frequency: 6.915416769117285e-4
allele num: 65072
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8564
num of homozygotes: 0

European (Finnish)
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allele count: 1
allele frequency: 1.65892501658925e-4
allele num: 6028
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

BaseQRankSum
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SIO_000300: -2.62e0

ClippingRankSum
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SIO_000300: -1.44e-1

VQSLOD
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MQRankSum
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FS
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SIO_000300: 0.0e0

DP
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SIO_000300: 1.694391e6

QD
type: SiteQuality
SIO_000300: 1.321e1

InbreedingCoeff
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SIO_000300: 8.0e-4

ReadPosRankSum
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SIO_000300: 2.05e-1

MQ
type: SiteQuality
SIO_000300: 5.951e1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8562
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6016
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10142
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.537184492882836e-5
allele num: 65054
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16410
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11400
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 864
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 5.23e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.128e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.68697e6

VQSLOD
type: SiteQuality
SIO_000300: 3.09e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -5.85e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.2e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.15e-1

GenotypeDepth
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variant carriers: 40

GenotypeDepth
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variant carriers: 19

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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variant carriers: 30

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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variant carriers: 371

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.079765937788728e-5
allele num: 64940
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 864
num of homozygotes: 0

African
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allele count: 372
allele frequency: 3.678797468354431e-2
allele num: 10112
num of homozygotes: 9

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16400
num of homozygotes: 0

Latino
type: Population
allele count: 9
allele frequency: 7.905832747716093e-4
allele num: 11384
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8550
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5988
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.663671e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.09e-1

InbreedingCoeff
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SIO_000300: 2.67e-2

QD
type: SiteQuality
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MQ
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SIO_000300: 6.0e1

VQSLOD
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MQRankSum
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FS
type: SiteQuality
SIO_000300: 6.860000000000001e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.3e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -4.57e-1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10108
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5972
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 6.097560975609756e-5
allele num: 16400
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 64920
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Other
type: Population
allele count: 0
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East Asian
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VQSLOD
type: SiteQuality
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MQ
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ClippingRankSum
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QD
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BaseQRankSum
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ReadPosRankSum
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InbreedingCoeff
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FS
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MQRankSum
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 10114
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.540309910353963e-5
allele num: 64922
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11378
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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South Asian
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allele count: 0
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ClippingRankSum
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InbreedingCoeff
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DP
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ReadPosRankSum
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MQRankSum
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FS
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VQSLOD
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MQ
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QD
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BaseQRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8542
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5938
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.906875371507826e-5
allele num: 10094
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64828
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11356
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.13e-1

MQ
type: SiteQuality
SIO_000300: 5.97e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.53e-1

QD
type: SiteQuality
SIO_000300: 1.641e1

DP
type: SiteQuality
SIO_000300: 1.605895e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -1.594e0

VQSLOD
type: SiteQuality
SIO_000300: -6.403e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.58e0

GenotypeDepth
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variant carriers: 10

GenotypeDepth
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variant carriers: 4

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 104

GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 3
allele frequency: 4.635352286773795e-5
allele num: 64720
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 97
allele frequency: 9.623015873015874e-3
allele num: 10080
num of homozygotes: 0

Latino
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allele count: 5
allele frequency: 4.408393581378946e-4
allele num: 11342
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8534
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5880
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

InbreedingCoeff
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SIO_000300: 0.0e0

DP
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SIO_000300: 1.569667e6

MQRankSum
type: SiteQuality
SIO_000300: 7.9e-2

MQ
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SIO_000300: 6.0e1

QD
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SIO_000300: 1.423e1

BaseQRankSum
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SIO_000300: 1.22e0

ReadPosRankSum
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SIO_000300: 2.35e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.8e-2

VQSLOD
type: SiteQuality
SIO_000300: 6.01e0

GenotypeDepth
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variant carriers: 2

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.710571330824495e-4
allele num: 5846
num of homozygotes: 0

South Asian
type: Population
allele count: 14
allele frequency: 8.572128337007102e-4
allele num: 16332
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.16822429906542e-3
allele num: 856
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 32
allele frequency: 4.958165478772854e-4
allele num: 64540
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 208
allele frequency: 2.443609022556391e-2
allele num: 8512
num of homozygotes: 3

Latino
type: Population
allele count: 2
allele frequency: 1.768659356207994e-4
allele num: 11308
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.46e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.200000000000001e-3

FS
type: SiteQuality
SIO_000300: 7.39e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.55e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.81e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.65e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.371e1

DP
type: SiteQuality
SIO_000300: 1.556191e6

ClippingRankSum
type: SiteQuality
SIO_000300: -2.54e-1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 854
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10046
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.551253412757508e-5
allele num: 64464
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5818
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16284
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -3.77e-1

DP
type: SiteQuality
SIO_000300: 1.547147e6

BaseQRankSum
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SIO_000300: -2.464e0

VQSLOD
type: SiteQuality
SIO_000300: 5.32e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.5e-2

QD
type: SiteQuality
SIO_000300: 1.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.24e0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 3

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10018
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.781132310373805e-5
allele num: 64258
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 4
allele frequency: 6.951685783802572e-4
allele num: 5754
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 858
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8466
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

InbreedingCoeff
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MQRankSum
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MQ
type: SiteQuality
SIO_000300: 5.903e1

ClippingRankSum
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ReadPosRankSum
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FS
type: SiteQuality
SIO_000300: 5.262e0

BaseQRankSum
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VQSLOD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.519802e6

QD
type: SiteQuality
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 8

East Asian
type: Population
allele count: 1
allele frequency: 1.155802126675913e-4
allele num: 8652
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 7
allele frequency: 1.049758555532228e-4
allele num: 66682
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.667918e6

ClippingRankSum
type: SiteQuality
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InbreedingCoeff
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MQ
type: SiteQuality
SIO_000300: 5.916e1

FS
type: SiteQuality
SIO_000300: 4.415e0

QD
type: SiteQuality
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BaseQRankSum
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VQSLOD
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SIO_000300: 4.04e-1

ReadPosRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
all individuals: 2726
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3031
bin: 6.25e1
variant carriers: 3

GenotypeDepth
all individuals: 5117
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 77
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 234
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 15
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 635
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1018
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2196
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 6603
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 8617
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2194
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3433
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3496
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 80
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3514
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30248
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 2324
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10508
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4548
bin: 6.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.998500749625187e-5
allele num: 66700
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16500
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.638562543192812e-5
allele num: 11576
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.66e-1

MQ
type: SiteQuality
SIO_000300: 5.977e1

MQRankSum
type: SiteQuality
SIO_000300: -4.4e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.01e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.31e-1

QD
type: SiteQuality
SIO_000300: 1.243e1

DP
type: SiteQuality
SIO_000300: 2.667845e6

FS
type: SiteQuality
SIO_000300: 6.293e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 1.92e0

GenotypeDepth
all individuals: 6605
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 8638
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3910
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1017
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 15
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 76
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1448
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 234
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 636
bin: 8.25e1
variant carriers: 1

GenotypeDepth
all individuals: 2196
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 580
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3027
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5115
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 411
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 155
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4555
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3432
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3493
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3513
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2194
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30244
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 27
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2326
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10576
bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499295331194339e-5
allele num: 66698
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.11e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 7.0e-1

FS
type: SiteQuality
SIO_000300: 1.759e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.74e0

MQ
type: SiteQuality
SIO_000300: 5.948e1

DP
type: SiteQuality
SIO_000300: 2.667746e6

QD
type: SiteQuality
SIO_000300: 9.26e0

MQRankSum
type: SiteQuality
SIO_000300: 1.63e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.32e-1

Annotation
canonical: false
consequence: splice_region_variant
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000183597
ensembl protein: ENSP00000411602
ensembl transcript: ENST00000434168
gene symbol: TANGO2
hgvsc: ENST00000434168.1:c.-39A>G
variant of: http://identifiers.org/hgnc/25439

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: non_coding_transcript_exon_variant
ensembl gene: ENSG00000183597
ensembl transcript: ENST00000462579
gene symbol: TANGO2
hgvsc: ENST00000462579.1:n.2A>G
variant of: http://identifiers.org/hgnc/25439

Annotation
canonical: false
consequence: splice_region_variant
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000183597
ensembl protein: ENSP00000389797
ensembl transcript: ENST00000447208
gene symbol: TANGO2
hgvsc: ENST00000447208.2:c.-39A>G
variant of: http://identifiers.org/hgnc/25439

GenotypeDepth
all individuals: 2196
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 65
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 234
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3028
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7570
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2769
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 102
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 6602
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 15
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 1017
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 8443
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7895
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3909
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 8670
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 411
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 635
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1448
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5116
bin: 5.25e1
variant carriers: 1

GenotypeDepth
all individuals: 580
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3433
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10696
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3515
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2334
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3492
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4547
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30243
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2194
bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499115521842113e-5
allele num: 66706
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -8.967000000000001e-1

DP
type: SiteQuality
SIO_000300: 2.668146e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.09e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

MQ
type: SiteQuality
SIO_000300: 5.928e1

QD
type: SiteQuality
SIO_000300: 1.407e1

MQRankSum
type: SiteQuality
SIO_000300: 1.47e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.217e0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.51e-1

FS
type: SiteQuality
SIO_000300: 5.577e0

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: non_coding_transcript_exon_variant
ensembl gene: ENSG00000183597
ensembl transcript: ENST00000462579
gene symbol: TANGO2
hgvsc: ENST00000462579.1:n.6C>T
variant of: http://identifiers.org/hgnc/25439

GenotypeDepth
all individuals: 581
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 3909
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 73
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 6602
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2196
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 8446
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5115
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3028
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7568
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1017
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 61
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 411
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 2787
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 234
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 8682
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1447
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 15
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 7898
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 635
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2330
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3512
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 30241
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2194
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4537
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3426
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3488
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10759
bin: 6.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499160470136723e-5
allele num: 66704
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.051e0

QD
type: SiteQuality
SIO_000300: 1.204e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -1.07e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.47e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.47e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.5e-1

DP
type: SiteQuality
SIO_000300: 2.668448e6

Annotation
canonical: false
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000183597
ensembl protein: ENSP00000415450
ensembl transcript: ENST00000450664
gene symbol: TANGO2
hgvsc: ENST00000450664.1:c.-34G>A
variant of: http://identifiers.org/hgnc/25439

GenotypeDepth
all individuals: 580
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 8691
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3909
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 234
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3027
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 8443
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 2790
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 59
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7897
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1447
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 15
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 6602
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5116
bin: 5.25e1
variant carriers: 1

GenotypeDepth
all individuals: 635
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1017
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7567
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 411
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 69
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2196
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10775
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3425
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3492
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2328
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4542
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30240
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 3510
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2195
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 5.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.997961386257345e-5
allele num: 66712
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.668399e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -2.67e-1

MQ
type: SiteQuality
SIO_000300: 5.97e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.42e0

MQRankSum
type: SiteQuality
SIO_000300: 2.02e-1

QD
type: SiteQuality
SIO_000300: 1.518e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.44e-1

FS
type: SiteQuality
SIO_000300: 1.433e0

VQSLOD
type: SiteQuality
SIO_000300: 3.75e0

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: non_coding_transcript_exon_variant
ensembl gene: ENSG00000183597
ensembl transcript: ENST00000462579
gene symbol: TANGO2
hgvsc: ENST00000462579.1:n.9G>A
variant of: http://identifiers.org/hgnc/25439

GenotypeDepth
all individuals: 7567
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 8711
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 6602
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3027
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3908
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 581
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2807
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 8435
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 14
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 2196
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 7896
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 53
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 50
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1447
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5116
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 234
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 635
bin: 8.25e1
variant carriers: 1

GenotypeDepth
all individuals: 411
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1016
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 30236
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4554
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3423
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10819
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3511
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2328
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2193
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3492
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 3.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.49902563333833e-5
allele num: 66710
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.26e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 6.23e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.03e0

MQ
type: SiteQuality
SIO_000300: 5.961e1

FS
type: SiteQuality
SIO_000300: 1.396e0

DP
type: SiteQuality
SIO_000300: 2.668505e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.022e0

QD
type: SiteQuality
SIO_000300: 1.426e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.3e0

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: non_coding_transcript_exon_variant
ensembl gene: ENSG00000183597
ensembl transcript: ENST00000485715
gene symbol: TANGO2
hgvsc: ENST00000485715.2:n.8G>T
variant of: http://identifiers.org/hgnc/25439

GenotypeDepth
all individuals: 8435
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 50
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 1447
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7567
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 8711
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3908
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 6602
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 53
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5116
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 411
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 14
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 581
bin: 9.75e1
variant carriers: 2

GenotypeDepth
all individuals: 2807
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2196
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3027
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1016
bin: 7.75e1
variant carriers: 1

GenotypeDepth
all individuals: 234
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 635
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7896
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3511
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3492
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2328
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3423
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30236
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 4554
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10819
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2193
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.49707690001499e-5
allele num: 66710
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.3e0

MQRankSum
type: SiteQuality
SIO_000300: 6.23e-1

FS
type: SiteQuality
SIO_000300: 1.396e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

QD
type: SiteQuality
SIO_000300: 1.426e1

MQ
type: SiteQuality
SIO_000300: 5.961e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.26e0

VQSLOD
type: SiteQuality
SIO_000300: 1.03e0

DP
type: SiteQuality
SIO_000300: 2.668505e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.022e0

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: non_coding_transcript_exon_variant
ensembl gene: ENSG00000183597
ensembl transcript: ENST00000484373
gene symbol: TANGO2
hgvsc: ENST00000484373.1:n.24G>A
variant of: http://identifiers.org/hgnc/25439

GenotypeDepth
all individuals: 7902
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 412
bin: 8.75e1
variant carriers: 1

GenotypeDepth
all individuals: 8731
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 19
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2836
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3027
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1447
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 13
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 8446
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 634
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3908
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 1017
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 6601
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 234
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5115
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 579
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 23
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7566
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2196
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4567
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30235
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 8
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2197
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3419
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2337
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3508
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3488
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10880
bin: 6.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498845888665727e-5
allele num: 66718
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.844e0

VQSLOD
type: SiteQuality
SIO_000300: 4.4e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -8.75e-1

FS
type: SiteQuality
SIO_000300: 7.375e0

MQ
type: SiteQuality
SIO_000300: 5.934e1

MQRankSum
type: SiteQuality
SIO_000300: 5.49e-1

DP
type: SiteQuality
SIO_000300: 2.669101e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.54e-1

QD
type: SiteQuality
SIO_000300: 1.041e1

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: non_coding_transcript_exon_variant
ensembl gene: ENSG00000183597
ensembl transcript: ENST00000484373
gene symbol: TANGO2
hgvsc: ENST00000484373.1:n.26C>T
variant of: http://identifiers.org/hgnc/25439

GenotypeDepth
all individuals: 7563
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 6601
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7902
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 587
bin: 9.75e1
variant carriers: 9

GenotypeDepth
all individuals: 633
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3906
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 412
bin: 8.75e1
variant carriers: 2

GenotypeDepth
all individuals: 8731
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 22
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 18
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2835
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1447
bin: 7.25e1
variant carriers: 1

GenotypeDepth
all individuals: 2195
bin: 6.75e1
variant carriers: 1

GenotypeDepth
all individuals: 5115
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 12
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 8451
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 235
bin: 9.25e1
variant carriers: 1

GenotypeDepth
all individuals: 1017
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3024
bin: 6.25e1
variant carriers: 1

GenotypeQuality
all individuals: 30234
bin: 9.75e1
variant carriers: 15

GenotypeQuality
all individuals: 2195
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3489
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3420
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10876
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2335
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4571
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3508
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 3.75e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 14
allele frequency: 2.098447149109659e-4
allele num: 66716
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.669615e6

MQRankSum
type: SiteQuality
SIO_000300: -1.34e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 1.65e0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.17e-1

QD
type: SiteQuality
SIO_000300: 1.205e1

MQ
type: SiteQuality
SIO_000300: 5.942e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.88e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.27e0

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: non_coding_transcript_exon_variant
ensembl gene: ENSG00000183597
ensembl transcript: ENST00000479679
gene symbol: TANGO2
hgvsc: ENST00000479679.1:n.152G>A
variant of: http://identifiers.org/hgnc/25439

GenotypeDepth
all individuals: 7901
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2195
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7570
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 410
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2837
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 15
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 234
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 21
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1446
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 6602
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3024
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5115
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 12
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 3908
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 8736
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1017
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 8451
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 633
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 579
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 10886
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3509
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3419
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2337
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4569
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2196
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3489
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30230
bin: 9.75e1
variant carriers: 2

African
type: Population
allele count: 2
allele frequency: 1.92270717169775e-4
allele num: 10402
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66718
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.76e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 8.34e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.69e0

QD
type: SiteQuality
SIO_000300: 1.383e1

DP
type: SiteQuality
SIO_000300: 2.668953e6

VQSLOD
type: SiteQuality
SIO_000300: 1.83e0

MQ
type: SiteQuality
SIO_000300: 5.944e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.78e-1

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: non_coding_transcript_exon_variant
ensembl gene: ENSG00000183597
ensembl transcript: ENST00000479679
gene symbol: TANGO2
hgvsc: ENST00000479679.1:n.161C>A
variant of: http://identifiers.org/hgnc/25439

GenotypeDepth
all individuals: 6601
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 8756
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2835
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 8452
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3909
bin: 5.75e1
variant carriers: 1

GenotypeDepth
all individuals: 14
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1017
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5113
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7570
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 12
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1445
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 9
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 3024
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 234
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 633
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7898
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2195
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 410
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 579
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30227
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 4
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2341
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3508
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10896
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3420
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2198
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3491
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4573
bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.496133325340207e-5
allele num: 66724
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.257e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.98e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.84e-1

DP
type: SiteQuality
SIO_000300: 2.668891e6

MQRankSum
type: SiteQuality
SIO_000300: 5.81e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 3.39e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.68e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.77e-1

Annotation
canonical: false
consequence: missense_variant
ensembl gene: ENSG00000183597
ensembl protein: ENSP00000385662
ensembl transcript: ENST00000401886
gene symbol: TANGO2
hgvsc: ENST00000401886.1:c.13T>A
hgvsp: ENSP00000385662.1:p.Phe5Ile
variant of: http://identifiers.org/hgnc/25439

Annotation
canonical: false
consequence: missense_variant
consequence: NMD_transcript_variant
ensembl gene: ENSG00000183597
ensembl protein: ENSP00000395816
ensembl transcript: ENST00000444651
gene symbol: TANGO2
hgvsc: ENST00000444651.1:c.13T>A
hgvsp: ENSP00000395816.1:p.Phe5Ile
variant of: http://identifiers.org/hgnc/25439

GenotypeDepth
all individuals: 3907
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7896
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1017
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 8
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 410
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3024
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5113
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 2840
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 8765
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 8456
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 234
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 578
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 6602
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1445
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2195
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7571
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 633
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30224
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3418
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2198
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4576
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10926
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3507
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3487
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2342
bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498666187093487e-5
allele num: 66726
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.47e0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.099999999999999e-2

MQ
type: SiteQuality
SIO_000300: 5.938e1

QD
type: SiteQuality
SIO_000300: 1.23e1

VQSLOD
type: SiteQuality
SIO_000300: -7.791e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.918e0

MQRankSum
type: SiteQuality
SIO_000300: -2.27e-1

DP
type: SiteQuality
SIO_000300: 2.668962e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

FS
type: SiteQuality
SIO_000300: 6.31e0

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: non_coding_transcript_exon_variant
ensembl gene: ENSG00000183597
ensembl transcript: ENST00000475446
gene symbol: TANGO2
hgvsc: ENST00000475446.1:n.219T>C
variant of: http://identifiers.org/hgnc/25439

Annotation
canonical: false
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000183597
ensembl protein: ENSP00000384827
ensembl transcript: ENST00000401833
gene symbol: TANGO2
hgvsc: ENST00000401833.1:c.-100T>C
variant of: http://identifiers.org/hgnc/25439

Annotation
canonical: false
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000183597
ensembl protein: ENSP00000396182
ensembl transcript: ENST00000420290
gene symbol: TANGO2
hgvsc: ENST00000420290.2:c.-162T>C
variant of: http://identifiers.org/hgnc/25439

GenotypeDepth
all individuals: 3024
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5113
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 8767
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3907
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 6
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 234
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2195
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 6602
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 7897
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 410
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1445
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2842
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 577
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 633
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7570
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1017
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 8455
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2342
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2198
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3417
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4576
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10931
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3488
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3507
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30224
bin: 9.75e1
variant carriers: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498666187093487e-5
allele num: 66726
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 9.29e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.04e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.76e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.6e-2

DP
type: SiteQuality
SIO_000300: 2.669002e6

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.15e-1

MQ
type: SiteQuality
SIO_000300: 5.882e1

QD
type: SiteQuality
SIO_000300: 1.308e1

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: non_coding_transcript_exon_variant
ensembl gene: ENSG00000183597
ensembl transcript: ENST00000479679
gene symbol: TANGO2
hgvsc: ENST00000479679.1:n.190A>T
variant of: http://identifiers.org/hgnc/25439

Annotation
canonical: false
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000183597
ensembl protein: ENSP00000391262
ensembl transcript: ENST00000434570
gene symbol: TANGO2
hgvsc: ENST00000434570.2:c.-92A>T
variant of: http://identifiers.org/hgnc/25439

GenotypeDepth
all individuals: 6
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 410
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 576
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7896
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 8773
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5113
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3024
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 6
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3907
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 8456
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7570
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 632
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 6
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 235
bin: 9.25e1
variant carriers: 1

GenotypeDepth
all individuals: 2837
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1017
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1445
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 6602
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2195
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4574
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3488
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30223
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10931
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3507
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2197
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2341
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3419
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.609840476648087e-5
allele num: 10406
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66726
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.41e0

MQ
type: SiteQuality
SIO_000300: 5.929e1

VQSLOD
type: SiteQuality
SIO_000300: 1.47e0

MQRankSum
type: SiteQuality
SIO_000300: 1.55e-1

FS
type: SiteQuality
SIO_000300: 1.738e0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.1e-2

QD
type: SiteQuality
SIO_000300: 1.492e1

DP
type: SiteQuality
SIO_000300: 2.668862e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.79e-1

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: non_coding_transcript_exon_variant
ensembl gene: ENSG00000183597
ensembl transcript: ENST00000475446
gene symbol: TANGO2
hgvsc: ENST00000475446.1:n.233G>A
variant of: http://identifiers.org/hgnc/25439

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: non_coding_transcript_exon_variant
ensembl gene: ENSG00000183597
ensembl transcript: ENST00000484373
gene symbol: TANGO2
hgvsc: ENST00000484373.1:n.71G>A
variant of: http://identifiers.org/hgnc/25439

GenotypeDepth
all individuals: 7571
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 2195
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3024
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1445
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 410
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 8455
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3907
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 9
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 6
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 2838
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 8771
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 234
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1017
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 576
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 5113
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 632
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 6602
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7896
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2341
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3418
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2197
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30222
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 10925
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3486
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4575
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3508
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498666187093487e-5
allele num: 66726
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -3.52e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.9e-1

DP
type: SiteQuality
SIO_000300: 2.66886e6

QD
type: SiteQuality
SIO_000300: 1.069e1

FS
type: SiteQuality
SIO_000300: 1.097e0

MQ
type: SiteQuality
SIO_000300: 5.947e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -1.31e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.059e0

VQSLOD
type: SiteQuality
SIO_000300: 1.65e0

Annotation
canonical: false
consequence: missense_variant
consequence: NMD_transcript_variant
ensembl gene: ENSG00000183597
ensembl protein: ENSP00000395816
ensembl transcript: ENST00000444651
gene symbol: TANGO2
hgvsc: ENST00000444651.1:c.37G>C
hgvsp: ENSP00000395816.1:p.Val13Leu
variant of: http://identifiers.org/hgnc/25439

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: non_coding_transcript_exon_variant
ensembl gene: ENSG00000183597
ensembl transcript: ENST00000411907
gene symbol: TANGO2
hgvsc: ENST00000411907.1:n.142G>C
variant of: http://identifiers.org/hgnc/25439

GenotypeDepth
all individuals: 576
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 2844
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 6
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 8766
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 9
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 6602
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 8455
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7571
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 6
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 1017
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1445
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7895
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5113
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2195
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3023
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3907
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 632
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 234
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 410
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2197
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3481
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3418
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30221
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2341
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4574
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10935
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3508
bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498711108446736e-5
allele num: 66724
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.668711e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.202e0

QD
type: SiteQuality
SIO_000300: 1.33e1

FS
type: SiteQuality
SIO_000300: 4.065e0

MQRankSum
type: SiteQuality
SIO_000300: -9.1e-2

MQ
type: SiteQuality
SIO_000300: 5.966e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.35e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 1.17e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.52e-1

Annotation
canonical: false
consequence: missense_variant
ensembl gene: ENSG00000183597
ensembl protein: ENSP00000381122
ensembl transcript: ENST00000398042
gene symbol: TANGO2
hgvsc: ENST00000398042.2:c.38T>C
hgvsp: ENSP00000381122.2:p.Val13Ala
variant of: http://identifiers.org/hgnc/25439

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: non_coding_transcript_exon_variant
ensembl gene: ENSG00000183597
ensembl transcript: ENST00000462579
gene symbol: TANGO2
hgvsc: ENST00000462579.1:n.78T>C
variant of: http://identifiers.org/hgnc/25439

GenotypeDepth
all individuals: 577
bin: 9.75e1
variant carriers: 2

GenotypeDepth
all individuals: 632
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 9
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 234
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 410
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 1444
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5113
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 6
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 2195
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 6603
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2843
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1017
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 8454
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3022
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7895
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 8767
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7571
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3907
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3418
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3481
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30221
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2341
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10933
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3508
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4575
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2197
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498711108446736e-5
allele num: 66724
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.511944360447536e-4
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 5.96e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -6.31e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.51e0

QD
type: SiteQuality
SIO_000300: 1.195e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.49e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 2.668733e6

FS
type: SiteQuality
SIO_000300: 4.397e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.94e0

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: non_coding_transcript_exon_variant
ensembl gene: ENSG00000183597
ensembl transcript: ENST00000471707
gene symbol: TANGO2
hgvsc: ENST00000471707.1:n.265A>C
variant of: http://identifiers.org/hgnc/25439

Annotation
canonical: false
consequence: missense_variant
ensembl gene: ENSG00000183597
ensembl protein: ENSP00000402926
ensembl transcript: ENST00000432883
gene symbol: TANGO2
hgvsc: ENST00000432883.1:c.47A>C
hgvsp: ENSP00000402926.1:p.Asn16Thr
variant of: http://identifiers.org/hgnc/25439

GenotypeDepth
all individuals: 7892
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1017
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 8
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 10
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3908
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5112
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2838
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2196
bin: 6.75e1
variant carriers: 1

GenotypeDepth
all individuals: 8767
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1444
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 8457
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 9
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3022
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 6603
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 632
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7572
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 575
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 234
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 410
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2196
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3420
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3508
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2338
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10935
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30220
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4573
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3480
bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498756032493031e-5
allele num: 66722
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.83e-1

DP
type: SiteQuality
SIO_000300: 2.668539e6

MQRankSum
type: SiteQuality
SIO_000300: -8.139999999999999e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.75e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.723e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

FS
type: SiteQuality
SIO_000300: 9.62e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.45e0

QD
type: SiteQuality
SIO_000300: 1.085e1

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: non_coding_transcript_exon_variant
ensembl gene: ENSG00000183597
ensembl transcript: ENST00000479679
gene symbol: TANGO2
hgvsc: ENST00000479679.1:n.212C>T
variant of: http://identifiers.org/hgnc/25439

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: non_coding_transcript_exon_variant
ensembl gene: ENSG00000183597
ensembl transcript: ENST00000484373
gene symbol: TANGO2
hgvsc: ENST00000484373.1:n.87C>T
variant of: http://identifiers.org/hgnc/25439

GenotypeDepth
all individuals: 7572
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 3022
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7893
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2836
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 234
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1017
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 410
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 8765
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 8457
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 11
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3908
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2194
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1444
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 10
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5112
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 9
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 576
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 6604
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 632
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2338
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4572
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2196
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3508
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30219
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 10933
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3420
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3480
bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66720
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.638562543192812e-5
allele num: 11576
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.87e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -1.082e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.33e-1

QD
type: SiteQuality
SIO_000300: 1.091e1

MQ
type: SiteQuality
SIO_000300: 5.981e1

DP
type: SiteQuality
SIO_000300: 2.668532e6

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 8.100000000000001e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.73e-1

Annotation
canonical: false
consequence: missense_variant
consequence: NMD_transcript_variant
ensembl gene: ENSG00000183597
ensembl protein: ENSP00000403432
ensembl transcript: ENST00000430807
gene symbol: TANGO2
hgvsc: ENST00000430807.1:c.49G>A
hgvsp: ENSP00000403432.1:p.Ala17Thr
variant of: http://identifiers.org/hgnc/25439

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: non_coding_transcript_exon_variant
ensembl gene: ENSG00000183597
ensembl transcript: ENST00000479679
gene symbol: TANGO2
hgvsc: ENST00000479679.1:n.213G>A
variant of: http://identifiers.org/hgnc/25439

GenotypeDepth
all individuals: 5112
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 6604
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3908
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7573
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 9
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 10
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 575
bin: 9.75e1
variant carriers: 3

GenotypeDepth
all individuals: 3022
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 8764
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7892
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2194
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 8459
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2835
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1444
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 234
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 411
bin: 8.75e1
variant carriers: 1

GenotypeDepth
all individuals: 11
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1017
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 632
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4572
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3480
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30219
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 4
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3419
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2337
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3509
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2195
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10932
bin: 6.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498845888665727e-5
allele num: 66718
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.101321585903084e-3
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.921968095329617e-4
allele num: 10406
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.446e0

DP
type: SiteQuality
SIO_000300: 2.668607e6

MQRankSum
type: SiteQuality
SIO_000300: -3.4e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.032e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

QD
type: SiteQuality
SIO_000300: 1.351e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.86e-1

MQ
type: SiteQuality
SIO_000300: 5.972e1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.0e-3

VQSLOD
type: SiteQuality
SIO_000300: 1.96e0

Annotation
canonical: false
consequence: NMD_transcript_variant
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000183597
ensembl protein: ENSP00000382706
ensembl transcript: ENST00000399807
gene symbol: TANGO2
hgvsc: ENST00000399807.3:c.-68C>T
variant of: http://identifiers.org/hgnc/25439

Annotation
canonical: false
consequence: 5_prime_UTR_variant
ensembl gene: ENSG00000183597
ensembl protein: ENSP00000384827
ensembl transcript: ENST00000401833
gene symbol: TANGO2
hgvsc: ENST00000401833.1:c.-68C>T
variant of: http://identifiers.org/hgnc/25439

GenotypeDepth
all individuals: 632
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 8770
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7574
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3908
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 12
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2194
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7892
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 9
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5113
bin: 5.25e1
variant carriers: 1

GenotypeDepth
all individuals: 8456
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1017
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 3021
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 9
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 410
bin: 8.75e1
variant carriers: 1

GenotypeDepth
all individuals: 573
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 6604
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 234
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1444
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2834
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4573
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30217
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2337
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10932
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3509
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3420
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3481
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2194
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 5.25e1
variant carriers: 0

Latino
type: Population
allele count: 2
allele frequency: 1.727712508638562e-4
allele num: 11576
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.609840476648087e-5
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66720
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.668228e6

VQSLOD
type: SiteQuality
SIO_000300: 1.95e0

FS
type: SiteQuality
SIO_000300: 2.35e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.2e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.01e0

MQ
type: SiteQuality
SIO_000300: 5.966e1

MQRankSum
type: SiteQuality
SIO_000300: -4.2e-2

QD
type: SiteQuality
SIO_000300: 1.268e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.41e0

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000183597
ensembl transcript: ENST00000475446
gene symbol: TANGO2
hgvsc: ENST00000475446.1:n.257+10T>C
variant of: http://identifiers.org/hgnc/25439

GenotypeDepth
all individuals: 3908
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 2804
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2194
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7895
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 8763
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7574
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1444
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1017
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 410
bin: 8.75e1
variant carriers: 1

GenotypeDepth
all individuals: 26
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 32
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 632
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 8454
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 572
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 11
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 234
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5112
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 6602
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3020
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10883
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2339
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4568
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3420
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30212
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 7
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3509
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2194
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3477
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 3.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498935755613514e-5
allele num: 66714
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.41e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.84e0

MQRankSum
type: SiteQuality
SIO_000300: 4.31e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.667656e6

QD
type: SiteQuality
SIO_000300: 1.359e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.0e-3

VQSLOD
type: SiteQuality
SIO_000300: 3.34e0

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000183597
ensembl protein: ENSP00000389797
ensembl transcript: ENST00000447208
gene symbol: TANGO2
hgvsc: ENST00000447208.2:c.56+11C>T
variant of: http://identifiers.org/hgnc/25439

GenotypeDepth
all individuals: 8762
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 11
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 572
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5112
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2806
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3907
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7895
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 8454
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 25
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 32
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7574
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 632
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1017
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 6603
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1444
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 234
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2194
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 409
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3021
bin: 6.25e1
variant carriers: 1

GenotypeQuality
all individuals: 3478
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2339
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3420
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3508
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30210
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 7
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2193
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10889
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4571
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 3.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.640055296353897e-5
allele num: 11574
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66716
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.9e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.4e-2

VQSLOD
type: SiteQuality
SIO_000300: -2.098e0

QD
type: SiteQuality
SIO_000300: 9.35e0

DP
type: SiteQuality
SIO_000300: 2.667617e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.24e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.14e0

MQ
type: SiteQuality
SIO_000300: 5.914e1

FS
type: SiteQuality
SIO_000300: 1.4794e1

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000183597
ensembl protein: ENSP00000381122
ensembl transcript: ENST00000398042
gene symbol: TANGO2
hgvsc: ENST00000398042.2:c.56+12G>A
variant of: http://identifiers.org/hgnc/25439

GenotypeDepth
all individuals: 409
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7897
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3907
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2195
bin: 6.75e1
variant carriers: 1

GenotypeDepth
all individuals: 7572
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 8767
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3021
bin: 6.25e1
variant carriers: 1

GenotypeDepth
all individuals: 25
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5112
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 6600
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 12
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 1017
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 572
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 234
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1444
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 632
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 32
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2805
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 8451
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4564
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3419
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2339
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3477
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30208
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 37
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3509
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10895
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2193
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 5.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.609840476648087e-5
allele num: 10406
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498890820792613e-5
allele num: 66716
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.252e0

FS
type: SiteQuality
SIO_000300: 4.607e0

VQSLOD
type: SiteQuality
SIO_000300: -3.403e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.73e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.5e-2

QD
type: SiteQuality
SIO_000300: 9.85e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 1.61e0

DP
type: SiteQuality
SIO_000300: 2.667562e6

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000183597
ensembl protein: ENSP00000385662
ensembl transcript: ENST00000401886
gene symbol: TANGO2
hgvsc: ENST00000401886.1:c.56+13C>T
variant of: http://identifiers.org/hgnc/25439

GenotypeDepth
all individuals: 3020
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7894
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5111
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 12
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 1018
bin: 7.75e1
variant carriers: 1

GenotypeDepth
all individuals: 2195
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 36
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 8451
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 234
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 27
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 8761
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7572
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 572
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3906
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 632
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2809
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 409
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1444
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 6601
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2340
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10900
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2193
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3478
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4566
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3508
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30208
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3421
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498890820792613e-5
allele num: 66716
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.47e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.85e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.0e-1

FS
type: SiteQuality
SIO_000300: 2.174e0

QD
type: SiteQuality
SIO_000300: 1.855e1

VQSLOD
type: SiteQuality
SIO_000300: -1.619e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.155e0

MQ
type: SiteQuality
SIO_000300: 5.965e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.667413e6

Annotation
canonical: false
consequence: NMD_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000183597
ensembl protein: ENSP00000402966
ensembl transcript: ENST00000450019
gene symbol: TANGO2
hgvsc: ENST00000450019.1:c.56+27C>T
variant of: http://identifiers.org/hgnc/25439

GenotypeDepth
all individuals: 8740
bin: 2.75e1
variant carriers: 1

GenotypeDepth
all individuals: 7886
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7560
bin: 4.25e1
variant carriers: 4

GenotypeDepth
all individuals: 1441
bin: 7.25e1
variant carriers: 27

GenotypeDepth
all individuals: 619
bin: 9.75e1
variant carriers: 80

GenotypeDepth
all individuals: 644
bin: 8.25e1
variant carriers: 34

GenotypeDepth
all individuals: 5094
bin: 5.25e1
variant carriers: 10

GenotypeDepth
all individuals: 61
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2777
bin: 2.25e1
variant carriers: 1

GenotypeDepth
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 247
bin: 9.25e1
variant carriers: 15

GenotypeDepth
all individuals: 3877
bin: 5.75e1
variant carriers: 13

GenotypeDepth
all individuals: 6588
bin: 4.75e1
variant carriers: 11

GenotypeDepth
all individuals: 28
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 8431
bin: 3.25e1
variant carriers: 2

GenotypeDepth
all individuals: 54
bin: 1.75e1
variant carriers: 1

GenotypeDepth
all individuals: 3015
bin: 6.25e1
variant carriers: 23

GenotypeDepth
all individuals: 2181
bin: 6.75e1
variant carriers: 25

GenotypeDepth
all individuals: 414
bin: 8.75e1
variant carriers: 24

GenotypeDepth
all individuals: 1047
bin: 7.75e1
variant carriers: 49

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3409
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2329
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3505
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 74
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10831
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4535
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30224
bin: 9.75e1
variant carriers: 320

GenotypeQuality
all individuals: 3471
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2193
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 3
allele frequency: 4.535833081342606e-4
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 2
allele frequency: 2.202643171806168e-3
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 10
allele frequency: 9.611687812379854e-4
allele num: 10404
num of homozygotes: 0

Latino
type: Population
allele count: 8
allele frequency: 6.914433880726015e-4
allele num: 11570
num of homozygotes: 0

South Asian
type: Population
allele count: 6
allele frequency: 3.633720930232558e-4
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 293
allele frequency: 4.393857597024774e-3
allele num: 66684
num of homozygotes: 2

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.97e1

VQSLOD
type: SiteQuality
SIO_000300: 4.75e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-3

FS
type: SiteQuality
SIO_000300: 5.49e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.54e0

QD
type: SiteQuality
SIO_000300: 1.374e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.32e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.8e-1

DP
type: SiteQuality
SIO_000300: 2.671028e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.57e-1

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000183597
ensembl protein: ENSP00000402926
ensembl transcript: ENST00000432883
gene symbol: TANGO2
hgvsc: ENST00000432883.1:c.56+28G>A
variant of: http://identifiers.org/hgnc/25439

GenotypeDepth
all individuals: 8455
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5105
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1427
bin: 7.25e1
variant carriers: 1

GenotypeDepth
all individuals: 2782
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3011
bin: 6.25e1
variant carriers: 1

GenotypeDepth
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 617
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 35
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 7913
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7592
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 546
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 68
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 233
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 60
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3899
bin: 5.75e1
variant carriers: 2

GenotypeDepth
all individuals: 8774
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2176
bin: 6.75e1
variant carriers: 1

GenotypeDepth
all individuals: 394
bin: 8.75e1
variant carriers: 1

GenotypeDepth
all individuals: 6611
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1006
bin: 7.75e1
variant carriers: 2

GenotypeQuality
all individuals: 17
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2343
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4542
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3484
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 85
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10858
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2205
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3513
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30107
bin: 9.75e1
variant carriers: 9

GenotypeQuality
all individuals: 20
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3420
bin: 8.25e1
variant carriers: 0

South Asian
type: Population
allele count: 7
allele frequency: 4.239854633555421e-4
allele num: 16510
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.999580058791769e-5
allele num: 66676
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.68e0

QD
type: SiteQuality
SIO_000300: 1.116e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.22e0

MQ
type: SiteQuality
SIO_000300: 5.974e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.798e0

DP
type: SiteQuality
SIO_000300: 2.660044e6

FS
type: SiteQuality
SIO_000300: 5.590000000000001e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.0e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -4.8e-1

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000183597
ensembl transcript: ENST00000484373
gene symbol: TANGO2
hgvsc: ENST00000484373.1:n.95+29C>T
variant of: http://identifiers.org/hgnc/25439

GenotypeDepth
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 8774
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 35
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 393
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2176
bin: 6.75e1
variant carriers: 1

GenotypeDepth
all individuals: 233
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 70
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3897
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2786
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 59
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 6613
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5106
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 545
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1004
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7914
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 8454
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3010
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1426
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7592
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 617
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3420
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2343
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 88
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3513
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4540
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10887
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30103
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 20
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2206
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3483
bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66676
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.611687812379854e-5
allele num: 10404
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.07e0

DP
type: SiteQuality
SIO_000300: 2.659716e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 5.5e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -1.631e0

MQRankSum
type: SiteQuality
SIO_000300: -6.29e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 9.72e-1

QD
type: SiteQuality
SIO_000300: 1.633e1

VQSLOD
type: SiteQuality
SIO_000300: -2.1e-1

Annotation
canonical: false
consequence: NMD_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000183597
ensembl protein: ENSP00000403432
ensembl transcript: ENST00000430807
gene symbol: TANGO2
hgvsc: ENST00000430807.1:c.56+31C>T
variant of: http://identifiers.org/hgnc/25439

GenotypeDepth
all individuals: 2175
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3009
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2783
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 8760
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 6612
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 5107
bin: 5.25e1
variant carriers: 1

GenotypeDepth
all individuals: 3897
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 8442
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 617
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 41
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 7908
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1004
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 77
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 393
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7592
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1426
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 545
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 233
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 81
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3477
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2337
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2206
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3419
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4524
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30101
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3513
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10820
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 95
bin: 2.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.643042350907519e-5
allele num: 11570
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66666
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.52e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.62e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -6.75e-1

FS
type: SiteQuality
SIO_000300: 1.058e0

VQSLOD
type: SiteQuality
SIO_000300: 8.26e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.102e0

QD
type: SiteQuality
SIO_000300: 1.301e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 2.659039e6

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000183597
ensembl protein: ENSP00000411602
ensembl transcript: ENST00000434168
gene symbol: TANGO2
hgvsc: ENST00000434168.1:c.56+32T>C
variant of: http://identifiers.org/hgnc/25439

GenotypeDepth
all individuals: 8765
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3897
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 8440
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 617
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 233
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 81
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2784
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1426
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 77
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2175
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 545
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7909
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 7588
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 41
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 6612
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5106
bin: 5.25e1
variant carriers: 1

GenotypeDepth
all individuals: 393
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1004
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3009
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3476
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30101
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2205
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3419
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3513
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10839
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 96
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4522
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2339
bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.613535858488752e-5
allele num: 10402
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66668
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 2.658951e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 1.15e0

VQSLOD
type: SiteQuality
SIO_000300: -1.369e0

FS
type: SiteQuality
SIO_000300: 9.196999999999999e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.848e0

QD
type: SiteQuality
SIO_000300: 1.244e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.95e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.94e0

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000183597
ensembl protein: ENSP00000385662
ensembl transcript: ENST00000401886
gene symbol: TANGO2
hgvsc: ENST00000401886.1:c.56+37G>T
variant of: http://identifiers.org/hgnc/25439

GenotypeDepth
all individuals: 3896
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 545
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 8745
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7583
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1427
bin: 7.25e1
variant carriers: 1

GenotypeDepth
all individuals: 48
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 3009
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 8425
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7901
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 94
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 233
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 393
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 5106
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 6610
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2794
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 617
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2174
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 98
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1004
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3514
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2334
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 30094
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 33
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4527
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10802
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2203
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3418
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 113
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3471
bin: 7.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500285054160291e-5
allele num: 66654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

QD
type: SiteQuality
SIO_000300: 1.274e1

DP
type: SiteQuality
SIO_000300: 2.657982e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 1.12e0

MQRankSum
type: SiteQuality
SIO_000300: 1.23e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.41e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.952e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.19e-1

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000183597
ensembl transcript: ENST00000484373
gene symbol: TANGO2
hgvsc: ENST00000484373.1:n.95+40C>T
variant of: http://identifiers.org/hgnc/25439

GenotypeDepth
all individuals: 7893
bin: 3.75e1
variant carriers: 1

GenotypeDepth
all individuals: 1006
bin: 7.75e1
variant carriers: 3

GenotypeDepth
all individuals: 103
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5105
bin: 5.25e1
variant carriers: 2

GenotypeDepth
all individuals: 618
bin: 8.25e1
variant carriers: 1

GenotypeDepth
all individuals: 1427
bin: 7.25e1
variant carriers: 1

GenotypeDepth
all individuals: 8414
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7581
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 110
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 233
bin: 9.25e1
variant carriers: 1

GenotypeDepth
all individuals: 6611
bin: 4.75e1
variant carriers: 2

GenotypeDepth
all individuals: 8738
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2791
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2174
bin: 6.75e1
variant carriers: 3

GenotypeDepth
all individuals: 57
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 394
bin: 8.75e1
variant carriers: 1

GenotypeDepth
all individuals: 3005
bin: 6.25e1
variant carriers: 2

GenotypeDepth
all individuals: 545
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3897
bin: 5.75e1
variant carriers: 4

GenotypeQuality
all individuals: 126
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3512
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4521
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 30095
bin: 9.75e1
variant carriers: 21

GenotypeQuality
all individuals: 45
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3416
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3475
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2203
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10751
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2330
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 4.25e1
variant carriers: 0

Latino
type: Population
allele count: 21
allele frequency: 1.815352697095436e-3
allele num: 11568
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66638
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.96e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 3.49e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.9e-2

MQRankSum
type: SiteQuality
SIO_000300: 1.56e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.43e-1

FS
type: SiteQuality
SIO_000300: 1.18e0

DP
type: SiteQuality
SIO_000300: 2.657509e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.506e0

QD
type: SiteQuality
SIO_000300: 1.307e1

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000183597
ensembl protein: ENSP00000396182
ensembl transcript: ENST00000420290
gene symbol: TANGO2
hgvsc: ENST00000420290.2:c.-124+50C>T
variant of: http://identifiers.org/hgnc/25439

GenotypeDepth
all individuals: 86
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 3892
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7871
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5101
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 8672
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 130
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 393
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2172
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 6607
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 617
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1426
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 8372
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 232
bin: 9.25e1
variant carriers: 1

GenotypeDepth
all individuals: 2836
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 163
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7580
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 545
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1003
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3003
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 191
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3440
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2198
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10727
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3502
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2320
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4507
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3404
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30065
bin: 9.75e1
variant carriers: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.501366243281386e-5
allele num: 66606
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16482
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.654304e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -6.15e-1

MQRankSum
type: SiteQuality
SIO_000300: -7.33e-1

QD
type: SiteQuality
SIO_000300: 1.536e1

VQSLOD
type: SiteQuality
SIO_000300: 3.11e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.646e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.55e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

Annotation
canonical: false
consequence: NMD_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000183597
ensembl protein: ENSP00000403432
ensembl transcript: ENST00000430807
gene symbol: TANGO2
hgvsc: ENST00000430807.1:c.56+56G>C
variant of: http://identifiers.org/hgnc/25439

GenotypeDepth
all individuals: 116
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 2844
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 618
bin: 8.25e1
variant carriers: 1

GenotypeDepth
all individuals: 3893
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2172
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 393
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7574
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 8327
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5102
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1004
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 6602
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7849
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 163
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 200
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 3000
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 545
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 231
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1426
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 8642
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30064
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 257
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10668
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3394
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 81
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3504
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3423
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4480
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2305
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2189
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10396
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.501817198810561e-5
allele num: 66586
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16442
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.209e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.61e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 9.27e-1

FS
type: SiteQuality
SIO_000300: 1.4047e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.313e0

VQSLOD
type: SiteQuality
SIO_000300: -2.581e0

DP
type: SiteQuality
SIO_000300: 2.652098e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.04e0

MQ
type: SiteQuality
SIO_000300: 5.972e1

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000183597
ensembl protein: ENSP00000411602
ensembl transcript: ENST00000434168
gene symbol: TANGO2
hgvsc: ENST00000434168.1:c.56+61C>T
variant of: http://identifiers.org/hgnc/25439

GenotypeDepth
all individuals: 3896
bin: 5.75e1
variant carriers: 10

GenotypeDepth
all individuals: 1428
bin: 7.25e1
variant carriers: 4

GenotypeDepth
all individuals: 8260
bin: 3.25e1
variant carriers: 5

GenotypeDepth
all individuals: 8558
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 8
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 7828
bin: 3.75e1
variant carriers: 5

GenotypeDepth
all individuals: 2839
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7579
bin: 4.25e1
variant carriers: 8

GenotypeDepth
all individuals: 393
bin: 8.75e1
variant carriers: 2

GenotypeDepth
all individuals: 545
bin: 9.75e1
variant carriers: 2

GenotypeDepth
all individuals: 266
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1007
bin: 7.75e1
variant carriers: 6

GenotypeDepth
all individuals: 6594
bin: 4.75e1
variant carriers: 5

GenotypeDepth
all individuals: 182
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 2173
bin: 6.75e1
variant carriers: 6

GenotypeDepth
all individuals: 619
bin: 8.25e1
variant carriers: 2

GenotypeDepth
all individuals: 5102
bin: 5.25e1
variant carriers: 11

GenotypeDepth
all individuals: 2997
bin: 6.25e1
variant carriers: 7

GenotypeDepth
all individuals: 231
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 201
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 100
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 89
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3488
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2183
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2302
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10508
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 94
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 89
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 358
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30072
bin: 9.75e1
variant carriers: 73

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 77
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4412
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3386
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3397
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 84
bin: 4.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10392
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 8
allele frequency: 1.202754307363863e-4
allele num: 66514
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 66
allele frequency: 9.978832778953735e-3
allele num: 6614
num of homozygotes: 1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16378
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.526e0

VQSLOD
type: SiteQuality
SIO_000300: 3.52e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.03e-2

MQ
type: SiteQuality
SIO_000300: 5.965e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.09e-1

DP
type: SiteQuality
SIO_000300: 2.649209e6

MQRankSum
type: SiteQuality
SIO_000300: 1.29e-1

FS
type: SiteQuality
SIO_000300: 1.166e0

QD
type: SiteQuality
SIO_000300: 1.366e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.12e-1

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000183597
ensembl protein: ENSP00000411602
ensembl transcript: ENST00000434168
gene symbol: TANGO2
hgvsc: ENST00000434168.1:c.56+64G>A
variant of: http://identifiers.org/hgnc/25439

Annotation
canonical: false
consequence: NMD_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000183597
ensembl protein: ENSP00000403432
ensembl transcript: ENST00000430807
gene symbol: TANGO2
hgvsc: ENST00000430807.1:c.56+64G>A
variant of: http://identifiers.org/hgnc/25439

GenotypeDepth
all individuals: 7825
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 6597
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5097
bin: 5.25e1
variant carriers: 1

GenotypeDepth
all individuals: 2169
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1425
bin: 7.25e1
variant carriers: 1

GenotypeDepth
all individuals: 1001
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2856
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3889
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 209
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 7569
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 617
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 316
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 8218
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2991
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 8520
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 11
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 391
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 544
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 231
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 230
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3382
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2179
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3395
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 115
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10428
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 91
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 99
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4403
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 108
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 109
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30028
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 417
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3493
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2292
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 89
bin: 4.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16342
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.007337904486948e-5
allele num: 66504
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10392
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.434e0

QD
type: SiteQuality
SIO_000300: 1.182e1

DP
type: SiteQuality
SIO_000300: 2.645664e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.82e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.16e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.77e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.797e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.3e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

Annotation
canonical: false
consequence: missense_variant
ensembl gene: ENSG00000183597
ensembl protein: ENSP00000384827
ensembl transcript: ENST00000401833
gene symbol: TANGO2
hgvsc: ENST00000401833.1:c.22G>T
hgvsp: ENSP00000384827.1:p.Ala8Ser
variant of: http://identifiers.org/hgnc/25439

GenotypeDepth
all individuals: 19
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 617
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 231
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7840
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7876
bin: 2.75e1
variant carriers: 1

GenotypeDepth
all individuals: 3889
bin: 5.75e1
variant carriers: 2

GenotypeDepth
all individuals: 600
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 2990
bin: 6.25e1
variant carriers: 1

GenotypeDepth
all individuals: 2168
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7733
bin: 3.75e1
variant carriers: 1

GenotypeDepth
all individuals: 454
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 6579
bin: 4.75e1
variant carriers: 1

GenotypeDepth
all individuals: 846
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7518
bin: 4.25e1
variant carriers: 1

GenotypeDepth
all individuals: 2892
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1424
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 544
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 391
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1002
bin: 7.75e1
variant carriers: 1

GenotypeDepth
all individuals: 5093
bin: 5.25e1
variant carriers: 1

GenotypeQuality
all individuals: 10
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 113
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9783
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 109
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 242
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4065
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 166
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1178
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 256
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3311
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 191
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29994
bin: 9.75e1
variant carriers: 10

GenotypeQuality
all individuals: 3470
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2158
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3352
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2176
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 81
bin: 4.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66188
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15876
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 10
allele frequency: 8.653513326410523e-4
allele num: 11556
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10358
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.77e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 1.3e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.08e-1

QD
type: SiteQuality
SIO_000300: 1.734e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.744e0

VQSLOD
type: SiteQuality
SIO_000300: 3.81e0

DP
type: SiteQuality
SIO_000300: 2.623419e6

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000183597
ensembl protein: ENSP00000389797
ensembl transcript: ENST00000447208
gene symbol: TANGO2
hgvsc: ENST00000447208.2:c.56+84C>T
variant of: http://identifiers.org/hgnc/25439

Annotation
canonical: false
consequence: NMD_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000183597
ensembl protein: ENSP00000402966
ensembl transcript: ENST00000450019
gene symbol: TANGO2
hgvsc: ENST00000450019.1:c.56+84C>T
variant of: http://identifiers.org/hgnc/25439

GenotypeDepth
all individuals: 849
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2168
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5094
bin: 5.25e1
variant carriers: 1

GenotypeDepth
all individuals: 2989
bin: 6.25e1
variant carriers: 1

GenotypeDepth
all individuals: 231
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 602
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 1424
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 19
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 450
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2901
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7821
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7729
bin: 3.75e1
variant carriers: 1

GenotypeDepth
all individuals: 7883
bin: 2.75e1
variant carriers: 1

GenotypeDepth
all individuals: 3890
bin: 5.75e1
variant carriers: 2

GenotypeDepth
all individuals: 391
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1002
bin: 7.75e1
variant carriers: 1

GenotypeDepth
all individuals: 7524
bin: 4.25e1
variant carriers: 1

GenotypeDepth
all individuals: 544
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 6578
bin: 4.75e1
variant carriers: 1

GenotypeDepth
all individuals: 617
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2158
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29991
bin: 9.75e1
variant carriers: 10

GenotypeQuality
all individuals: 258
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 97
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 161
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4042
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3305
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 245
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1179
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 107
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3467
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 174
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9811
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3346
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 131
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2152
bin: 8.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66164
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15852
num of homozygotes: 0

Latino
type: Population
allele count: 10
allele frequency: 8.653513326410523e-4
allele num: 11556
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10358
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.938e0

MQRankSum
type: SiteQuality
SIO_000300: 1.56e-1

DP
type: SiteQuality
SIO_000300: 2.623238e6

ClippingRankSum
type: SiteQuality
SIO_000300: -3.64e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.739e1

VQSLOD
type: SiteQuality
SIO_000300: 3.98e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

Annotation
canonical: false
consequence: NMD_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000183597
ensembl protein: ENSP00000403432
ensembl transcript: ENST00000430807
gene symbol: TANGO2
hgvsc: ENST00000430807.1:c.56+85A>C
variant of: http://identifiers.org/hgnc/25439

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000183597
ensembl transcript: ENST00000485715
gene symbol: TANGO2
hgvsc: ENST00000485715.2:n.95+85A>C
variant of: http://identifiers.org/hgnc/25439

GenotypeDepth
all individuals: 894
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 391
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 446
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 6576
bin: 4.75e1
variant carriers: 1

GenotypeDepth
all individuals: 7847
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7521
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5095
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2898
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7799
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1424
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 18
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 7721
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 638
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 2168
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1001
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3889
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 231
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2988
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 617
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 544
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 113
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3467
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 269
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4050
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 158
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 249
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 85
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1243
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9850
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29987
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 128
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2155
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3310
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3343
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2174
bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10346
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15848
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.511395925276585e-5
allele num: 66164
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 4.408e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.191e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 1.89e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.14e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.03e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

QD
type: SiteQuality
SIO_000300: 8.880000000000001e0

DP
type: SiteQuality
SIO_000300: 2.621487e6

ClippingRankSum
type: SiteQuality
SIO_000300: -5.7e-2

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000183597
ensembl transcript: ENST00000484373
gene symbol: TANGO2
hgvsc: ENST00000484373.1:n.95+93G>T
variant of: http://identifiers.org/hgnc/25439

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000183597
ensembl protein: ENSP00000415450
ensembl transcript: ENST00000450664
gene symbol: TANGO2
hgvsc: ENST00000450664.1:c.56+93G>T
variant of: http://identifiers.org/hgnc/25439

GenotypeDepth
all individuals: 989
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 2682
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1424
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 231
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1001
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 6571
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 651
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 22
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 7522
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1316
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7698
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7272
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7637
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 544
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2168
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 391
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3888
bin: 5.75e1
variant carriers: 1

GenotypeDepth
all individuals: 617
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2988
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5094
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3288
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29985
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 256
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3462
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1876
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3950
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 393
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 142
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3333
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 156
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 121
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 357
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2153
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8915
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 102
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2130
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10312
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65910
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.490977541217708e-5
allele num: 15406
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.93e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.58e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.753e0

MQRankSum
type: SiteQuality
SIO_000300: 3.42e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 4.34e0

DP
type: SiteQuality
SIO_000300: 2.606053e6

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.297e1

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000183597
ensembl protein: ENSP00000415450
ensembl transcript: ENST00000450664
gene symbol: TANGO2
hgvsc: ENST00000450664.1:c.56+96T>G
variant of: http://identifiers.org/hgnc/25439

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000183597
ensembl transcript: ENST00000475446
gene symbol: TANGO2
hgvsc: ENST00000475446.1:n.257+96T>G
variant of: http://identifiers.org/hgnc/25439

GenotypeDepth
all individuals: 1112
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 720
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2595
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7566
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 231
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 25
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 1001
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 391
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 617
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 6572
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2988
bin: 6.25e1
variant carriers: 1

GenotypeDepth
all individuals: 7098
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5094
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1462
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7693
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7519
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3886
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1424
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 544
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2168
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3922
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2114
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3331
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 181
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29984
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3286
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 272
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 110
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3461
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 425
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 379
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 122
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2121
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2150
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8681
bin: 6.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15228
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.710623422023694e-5
allele num: 10298
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65812
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -1.046e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.029e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.7e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

QD
type: SiteQuality
SIO_000300: 1.461e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.85e0

MQRankSum
type: SiteQuality
SIO_000300: 7.0e-3

DP
type: SiteQuality
SIO_000300: 2.600623e6

Annotation
canonical: false
consequence: non_coding_transcript_variant
consequence: intron_variant
ensembl gene: ENSG00000183597
ensembl transcript: ENST00000462579
gene symbol: TANGO2
hgvsc: ENST00000462579.1:n.96+102delA
variant of: http://identifiers.org/hgnc/25439

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000183597
ensembl protein: ENSP00000411602
ensembl transcript: ENST00000434168
gene symbol: TANGO2
hgvsc: ENST00000434168.1:c.56+102delA
variant of: http://identifiers.org/hgnc/25439

GenotypeDepth
all individuals: 6575
bin: 4.75e1
variant carriers: 2

GenotypeDepth
all individuals: 7638
bin: 3.75e1
variant carriers: 3

GenotypeDepth
all individuals: 2169
bin: 6.75e1
variant carriers: 1

GenotypeDepth
all individuals: 1805
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 824
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1426
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 391
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1003
bin: 7.75e1
variant carriers: 2

GenotypeDepth
all individuals: 2987
bin: 6.25e1
variant carriers: 1

GenotypeDepth
all individuals: 2580
bin: 2.25e1
variant carriers: 1

GenotypeDepth
all individuals: 7274
bin: 3.25e1
variant carriers: 1

GenotypeDepth
all individuals: 544
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 48
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 7501
bin: 4.25e1
variant carriers: 1

GenotypeDepth
all individuals: 618
bin: 8.25e1
variant carriers: 1

GenotypeDepth
all individuals: 1421
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3888
bin: 5.75e1
variant carriers: 3

GenotypeDepth
all individuals: 6687
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5095
bin: 5.25e1
variant carriers: 1

GenotypeDepth
all individuals: 231
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2661
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 136
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3599
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8006
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 419
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30001
bin: 9.75e1
variant carriers: 17

GenotypeQuality
all individuals: 70
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 324
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3221
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3457
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 250
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2142
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 166
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3320
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2063
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 266
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 489
bin: 3.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10250
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 9
allele frequency: 1.361573373676248e-3
allele num: 6610
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 8
allele frequency: 1.219400664573362e-4
allele num: 65606
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14780
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.5e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 2.74e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.31e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.313e0

VQSLOD
type: SiteQuality
SIO_000300: 5.44e0

QD
type: SiteQuality
SIO_000300: 1.39e1

DP
type: SiteQuality
SIO_000300: 2.585669e6

MQ
type: SiteQuality
SIO_000300: 6.011e1

Annotation
canonical: true
consequence: intron_variant
ensembl gene: ENSG00000183597
ensembl protein: ENSP00000332721
ensembl transcript: ENST00000327374
gene symbol: TANGO2
hgvsc: ENST00000327374.4:c.56+106C>T
variant of: http://identifiers.org/hgnc/25439

Annotation
canonical: false
consequence: intron_variant
ensembl gene: ENSG00000183597
ensembl protein: ENSP00000385662
ensembl transcript: ENST00000401886
gene symbol: TANGO2
hgvsc: ENST00000401886.1:c.56+106C>T
variant of: http://identifiers.org/hgnc/25439

GenotypeDepth
all individuals: 391
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 6442
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2168
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 842
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7130
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 7598
bin: 3.75e1
variant carriers: 1

GenotypeDepth
all individuals: 1614
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 544
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7497
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 6578
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 64
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 5097
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 231
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 617
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1986
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1422
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2611
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3885
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2986
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1002
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 78
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29987
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2957
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 431
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 145
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 97
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3320
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2056
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3459
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 486
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7844
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3536
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 212
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 122
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2140
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 318
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3222
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 218
bin: 5.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65430
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 870
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14506
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11534
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.786651008025054e-5
allele num: 10218
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.61e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.87e0

QD
type: SiteQuality
SIO_000300: 1.273e1

VQSLOD
type: SiteQuality
SIO_000300: 5.590000000000001e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

DP
type: SiteQuality
SIO_000300: 2.577291e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 2.444e0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.5e-1

MQRankSum
type: SiteQuality
SIO_000300: 9.389999999999999e-1