X-51076303-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24051076303
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24051076303
    reference: chr 0
allele count: 2
allele frequency: 2.553397934301071e-5
allele num: 78327
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000122824
  ensembl protein: ENSP00000348831
  ensembl transcript: ENST00000356450
  gene symbol: NUDT10
  hgvsc: ENST00000356450.2:c.486C>T
  hgvsp: ENST00000356450.2:c.486C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17621
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000122824
  ensembl protein: ENSP00000365174
  ensembl transcript: ENST00000376006
  gene symbol: NUDT10
  hgvsc: ENST00000376006.3:c.486C>T
  hgvsp: ENST00000376006.3:c.486C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17621
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
hgvs: p.Ser162Ser
num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 2
  allele frequency: 3.26797385620915e-4
  allele num: 6120
  num of homozygotes: 0
population: Other
population: Latino
population: African
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum

X-51076304-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24051076304
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24051076304
    reference: chr 0
allele count: 4
allele frequency: 5.102561485865905e-5
allele num: 78392
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000122824
  ensembl protein: ENSP00000348831
  ensembl transcript: ENST00000356450
  gene symbol: NUDT10
  hgvsc: ENST00000356450.2:c.487G>T
  hgvsp: ENSP00000348831.2:p.Asp163Tyr
  variant of: http://identifiers.org/hgnc/17621
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000122824
  ensembl protein: ENSP00000365174
  ensembl transcript: ENST00000376006
  gene symbol: NUDT10
  hgvsc: ENST00000376006.3:c.487G>T
  hgvsp: ENSP00000365174.3:p.Asp163Tyr
  variant of: http://identifiers.org/hgnc/17621
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 550
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Asp163Tyr
num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 7709
  num of homozygotes: 0
population: South Asian
population: East Asian
population: Other
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: MQ
site quality: BaseQRankSum

X-51076321-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24051076321
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24051076321
    reference: chr 0
allele count: 0
allele frequency: 0.0e0
allele num: 77573
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000122824
  ensembl protein: ENSP00000365174
  ensembl transcript: ENST00000376006
  gene symbol: NUDT10
  hgvsc: ENST00000376006.3:c.494+10G>A
  variant of: http://identifiers.org/hgnc/17621
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122824
  ensembl protein: ENSP00000348831
  ensembl transcript: ENST00000356450
  gene symbol: NUDT10
  hgvsc: ENST00000356450.2:c.494+10G>A
  variant of: http://identifiers.org/hgnc/17621
canonical: true
consequence: intron
filter: AC_Adj0
genotype depth: GenotypeDepth
  all individuals: 551
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 7303
  num of homozygotes: 0
population: East Asian
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: FS
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum

X-51076321-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24051076321
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24051076321
    reference: chr 0
allele count: 1
allele frequency: 1.289108323772447e-5
allele num: 77573
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122824
  ensembl protein: ENSP00000348831
  ensembl transcript: ENST00000356450
  gene symbol: NUDT10
  hgvsc: ENST00000356450.2:c.494+10G>T
  variant of: http://identifiers.org/hgnc/17621
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000122824
  ensembl protein: ENSP00000365174
  ensembl transcript: ENST00000376006
  gene symbol: NUDT10
  hgvsc: ENST00000376006.3:c.494+10G>T
  variant of: http://identifiers.org/hgnc/17621
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 6066
  num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
population: Other
population: South Asian
reference allele: G
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum

X-51076327-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24051076327
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24051076327
    reference: chr 0
allele count: 2
allele frequency: 2.595919214994029e-5
allele num: 77044
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122824
  ensembl protein: ENSP00000348831
  ensembl transcript: ENST00000356450
  gene symbol: NUDT10
  hgvsc: ENST00000356450.2:c.494+16G>C
  variant of: http://identifiers.org/hgnc/17621
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000122824
  ensembl protein: ENSP00000365174
  ensembl transcript: ENST00000376006
  gene symbol: NUDT10
  hgvsc: ENST00000376006.3:c.494+16G>C
  variant of: http://identifiers.org/hgnc/17621
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14724
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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num of homozygotes: 0
population: Latino
  type: Population
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  allele num: 8676
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population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Other
population: South Asian
population: African
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site quality: BaseQRankSum
site quality: VQSLOD
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X-51076329-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24051076329
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24051076329
    reference: chr 0
allele count: 3
allele frequency: 3.89757181276065e-5
allele num: 76971
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
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  ensembl protein: ENSP00000348831
  ensembl transcript: ENST00000356450
  gene symbol: NUDT10
  hgvsc: ENST00000356450.2:c.494+18C>T
  variant of: http://identifiers.org/hgnc/17621
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000122824
  ensembl protein: ENSP00000365174
  ensembl transcript: ENST00000376006
  gene symbol: NUDT10
  hgvsc: ENST00000376006.3:c.494+18C>T
  variant of: http://identifiers.org/hgnc/17621
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
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population: East Asian
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  allele num: 6046
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population: Other
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population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
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site quality: ClippingRankSum
site quality: BaseQRankSum
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X-51076330-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24051076330
    reference: chr 0
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    type: ExactPosition
    position: 24051076330
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allele count: 2
allele frequency: 2.607086059910838e-5
allele num: 76714
alternate allele: T
annotation: Annotation
  canonical: true
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  ensembl protein: ENSP00000365174
  ensembl transcript: ENST00000376006
  gene symbol: NUDT10
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  variant of: http://identifiers.org/hgnc/17621
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122824
  ensembl protein: ENSP00000348831
  ensembl transcript: ENST00000356450
  gene symbol: NUDT10
  hgvsc: ENST00000356450.2:c.494+19C>T
  variant of: http://identifiers.org/hgnc/17621
canonical: true
consequence: intron
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genotype depth: GenotypeDepth
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population: East Asian
population: European (Finnish)
population: African
population: South Asian
population: Other
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site quality: MQRankSum
site quality: BaseQRankSum
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site quality: VQSLOD
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X-51076333-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24051076333
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24051076333
    reference: chr 0
allele count: 4
allele frequency: 5.232657012414479e-5
allele num: 76443
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122824
  ensembl protein: ENSP00000348831
  ensembl transcript: ENST00000356450
  gene symbol: NUDT10
  hgvsc: ENST00000356450.2:c.494+22A>G
  variant of: http://identifiers.org/hgnc/17621
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000122824
  ensembl protein: ENSP00000365174
  ensembl transcript: ENST00000376006
  gene symbol: NUDT10
  hgvsc: ENST00000376006.3:c.494+22A>G
  variant of: http://identifiers.org/hgnc/17621
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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population: South Asian
population: African
population: Latino
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population: East Asian
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site quality: MQRankSum
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X-51076343-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24051076343
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24051076343
    reference: chr 0
allele count: 4
allele frequency: 5.330561441383814e-5
allele num: 75039
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122824
  ensembl protein: ENSP00000348831
  ensembl transcript: ENST00000356450
  gene symbol: NUDT10
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  variant of: http://identifiers.org/hgnc/17621
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000122824
  ensembl protein: ENSP00000365174
  ensembl transcript: ENST00000376006
  gene symbol: NUDT10
  hgvsc: ENST00000376006.3:c.494+32G>A
  variant of: http://identifiers.org/hgnc/17621
canonical: true
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: East Asian
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  allele num: 5941
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population: African
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
population: Other
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site quality: ReadPosRankSum
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site quality: FS
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site quality: BaseQRankSum
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X-51076355-T-C
type: Variant
location: Region
  begin: Position
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    reference: chr 0
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    type: ExactPosition
    position: 24051076355
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allele count: 13
allele frequency: 1.808972503617945e-4
allele num: 71864
alternate allele: C
annotation: Annotation
  canonical: true
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  ensembl gene: ENSG00000122824
  ensembl protein: ENSP00000365174
  ensembl transcript: ENST00000376006
  gene symbol: NUDT10
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  variant of: http://identifiers.org/hgnc/17621
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122824
  ensembl protein: ENSP00000348831
  ensembl transcript: ENST00000356450
  gene symbol: NUDT10
  hgvsc: ENST00000356450.2:c.494+44T>C
  variant of: http://identifiers.org/hgnc/17621
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
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population: African
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population: Latino
population: European (Finnish)
population: East Asian
population: South Asian
population: Other
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reference allele: T
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site quality: BaseQRankSum
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X-51079045-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24051079045
    reference: chr 0
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    type: ExactPosition
    position: 24051079045
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allele count: 5
allele frequency: 6.437243314922817e-5
allele num: 77673
alternate allele: G
annotation: Annotation
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  ensembl protein: ENSP00000365174
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  gene symbol: NUDT10
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  variant of: http://identifiers.org/hgnc/17621
annotation: Annotation
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  ensembl protein: ENSP00000348831
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  gene symbol: NUDT10
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  variant of: http://identifiers.org/hgnc/17621
canonical: true
consequence: intron
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genotype depth: GenotypeDepth
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population: Latino
population: East Asian
population: European (Non-Finnish)
population: Other
population: African
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site quality: BaseQRankSum
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site quality: MQRankSum
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X-51079051-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24051079051
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24051079051
    reference: chr 0
allele count: 1
allele frequency: 1.286488016364128e-5
allele num: 77731
alternate allele: A
annotation: Annotation
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  ensembl gene: ENSG00000122824
  ensembl protein: ENSP00000365174
  ensembl transcript: ENST00000376006
  gene symbol: NUDT10
  hgvsc: ENST00000376006.3:c.*-40G>A
  variant of: http://identifiers.org/hgnc/17621
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122824
  ensembl protein: ENSP00000348831
  ensembl transcript: ENST00000356450
  gene symbol: NUDT10
  hgvsc: ENST00000356450.2:c.*-40G>A
  variant of: http://identifiers.org/hgnc/17621
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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X-51079058-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24051079058
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24051079058
    reference: chr 0
allele count: 1
allele frequency: 1.280278588620884e-5
allele num: 78108
alternate allele: A
annotation: Annotation
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  ensembl protein: ENSP00000348831
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  gene symbol: NUDT10
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  variant of: http://identifiers.org/hgnc/17621
annotation: Annotation
  canonical: true
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  ensembl gene: ENSG00000122824
  ensembl protein: ENSP00000365174
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  gene symbol: NUDT10
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  variant of: http://identifiers.org/hgnc/17621
canonical: true
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 8017
  num of homozygotes: 0
population: East Asian
population: Other
population: South Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: VQSLOD

X-51079067-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24051079067
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24051079067
    reference: chr 0
allele count: 1
allele frequency: 1.270938715335146e-5
allele num: 78682
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122824
  ensembl protein: ENSP00000348831
  ensembl transcript: ENST00000356450
  gene symbol: NUDT10
  hgvsc: ENST00000356450.2:c.*-24A>G
  variant of: http://identifiers.org/hgnc/17621
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000122824
  ensembl protein: ENSP00000365174
  ensembl transcript: ENST00000376006
  gene symbol: NUDT10
  hgvsc: ENST00000376006.3:c.*-24A>G
  variant of: http://identifiers.org/hgnc/17621
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6936
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 6.25e1
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num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 7398
  num of homozygotes: 0
population: African
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: East Asian
reference allele: A
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: QD

X-51079074-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24051079074
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24051079074
    reference: chr 0
allele count: 2
allele frequency: 2.517274798303357e-5
allele num: 79451
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122824
  ensembl protein: ENSP00000348831
  ensembl transcript: ENST00000356450
  gene symbol: NUDT10
  hgvsc: ENST00000356450.2:c.*-17A>T
  variant of: http://identifiers.org/hgnc/17621
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000122824
  ensembl protein: ENSP00000365174
  ensembl transcript: ENST00000376006
  gene symbol: NUDT10
  hgvsc: ENST00000376006.3:c.*-17A>T
  variant of: http://identifiers.org/hgnc/17621
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7570
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 7561
  num of homozygotes: 0
population: East Asian
population: Other
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: A
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum

X-51079077-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24051079077
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24051079077
    reference: chr 0
allele count: 1
allele frequency: 1.253274178792094e-5
allele num: 79791
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000122824
  ensembl protein: ENSP00000365174
  ensembl transcript: ENST00000376006
  gene symbol: NUDT10
  hgvsc: ENST00000376006.3:c.*-14A>C
  variant of: http://identifiers.org/hgnc/17621
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000122824
  ensembl protein: ENSP00000348831
  ensembl transcript: ENST00000356450
  gene symbol: NUDT10
  hgvsc: ENST00000356450.2:c.*-14A>C
  variant of: http://identifiers.org/hgnc/17621
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 1534
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: East Asian
  type: Population
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  allele frequency: 0.0e0
  allele num: 6233
  num of homozygotes: 0
population: Other
population: European (Finnish)
population: Latino
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: A
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP

X-51079098-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24051079098
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24051079098
    reference: chr 0
allele count: 0
allele frequency: 0.0e0
allele num: 81997
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000122824
  ensembl protein: ENSP00000365174
  ensembl transcript: ENST00000376006
  gene symbol: NUDT10
  hgvsc: ENST00000376006.3:c.*7G>A
  variant of: http://identifiers.org/hgnc/17621
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000122824
  ensembl protein: ENSP00000348831
  ensembl transcript: ENST00000356450
  gene symbol: NUDT10
  hgvsc: ENST00000356450.2:c.*7G>A
  variant of: http://identifiers.org/hgnc/17621
canonical: true
consequence: 3' UTR
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 4409
  num of homozygotes: 0
population: East Asian
population: South Asian
population: Other
population: European (Non-Finnish)
population: African
population: Latino
reference allele: G
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum

X-51079100-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24051079100
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24051079100
    reference: chr 0
allele count: 1
allele frequency: 1.216426625145971e-5
allele num: 82208
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000122824
  ensembl protein: ENSP00000365174
  ensembl transcript: ENST00000376006
  gene symbol: NUDT10
  hgvsc: ENST00000376006.3:c.*9A>G
  variant of: http://identifiers.org/hgnc/17621
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000122824
  ensembl protein: ENSP00000348831
  ensembl transcript: ENST00000356450
  gene symbol: NUDT10
  hgvsc: ENST00000356450.2:c.*9A>G
  variant of: http://identifiers.org/hgnc/17621
canonical: true
consequence: 3' UTR
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
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  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 3.25e1
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num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 8255
  num of homozygotes: 0
population: Other
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
reference allele: A
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ

X-51079104-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24051079104
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24051079104
    reference: chr 0
allele count: 1
allele frequency: 1.212738606320794e-5
allele num: 82458
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000122824
  ensembl protein: ENSP00000365174
  ensembl transcript: ENST00000376006
  gene symbol: NUDT10
  hgvsc: ENST00000376006.3:c.*13A>G
  variant of: http://identifiers.org/hgnc/17621
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000122824
  ensembl protein: ENSP00000348831
  ensembl transcript: ENST00000356450
  gene symbol: NUDT10
  hgvsc: ENST00000356450.2:c.*13A>G
  variant of: http://identifiers.org/hgnc/17621
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 829
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 8276
  num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: European (Finnish)
population: Other
reference allele: A
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum

X-51079104-ATGT-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24051079104
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24051079101
    reference: chr 0
allele count: 1
allele frequency: 1.212738606320794e-5
allele num: 82458
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000122824
  ensembl protein: ENSP00000348831
  ensembl transcript: ENST00000356450
  gene symbol: NUDT10
  hgvsc: ENST00000356450.2:c.*18_*20delGTT
  variant of: http://identifiers.org/hgnc/17621
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000122824
  ensembl protein: ENSP00000365174
  ensembl transcript: ENST00000376006
  gene symbol: NUDT10
  hgvsc: ENST00000376006.3:c.*18_*20delGTT
  variant of: http://identifiers.org/hgnc/17621
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2379
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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population: Other
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 585
  num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: African
population: Latino
population: European (Finnish)
reference allele: ATGT
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum

X-51079111-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24051079111
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24051079111
    reference: chr 0
allele count: 2
allele frequency: 2.418613650655444e-5
allele num: 82692
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000122824
  ensembl protein: ENSP00000348831
  ensembl transcript: ENST00000356450
  gene symbol: NUDT10
  hgvsc: ENST00000356450.2:c.*20T>C
  variant of: http://identifiers.org/hgnc/17621
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000122824
  ensembl protein: ENSP00000365174
  ensembl transcript: ENST00000376006
  gene symbol: NUDT10
  hgvsc: ENST00000376006.3:c.*20T>C
  variant of: http://identifiers.org/hgnc/17621
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: Other
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 585
  num of homozygotes: 0
population: Latino
population: South Asian
population: East Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
reference allele: T
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS

X-51079113-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24051079113
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24051079113
    reference: chr 0
allele count: 1
allele frequency: 1.208283995070201e-5
allele num: 82762
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000122824
  ensembl protein: ENSP00000365174
  ensembl transcript: ENST00000376006
  gene symbol: NUDT10
  hgvsc: ENST00000376006.3:c.*22A>G
  variant of: http://identifiers.org/hgnc/17621
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000122824
  ensembl protein: ENSP00000348831
  ensembl transcript: ENST00000356450
  gene symbol: NUDT10
  hgvsc: ENST00000356450.2:c.*22A>G
  variant of: http://identifiers.org/hgnc/17621
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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population: European (Finnish)
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  allele frequency: 0.0e0
  allele num: 4438
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population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: African
reference allele: A
site quality: InbreedingCoeff
site quality: VQSLOD
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X-51079115-A-C
type: Variant
location: Region
  begin: Position
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    reference: chr 0
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    type: ExactPosition
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allele count: 1
allele frequency: 1.207583625166043e-5
allele num: 82810
alternate allele: C
annotation: Annotation
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  consequence: 3_prime_UTR_variant
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  ensembl protein: ENSP00000348831
  ensembl transcript: ENST00000356450
  gene symbol: NUDT10
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  variant of: http://identifiers.org/hgnc/17621
annotation: Annotation
  canonical: true
  consequence: 3_prime_UTR_variant
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  ensembl protein: ENSP00000365174
  ensembl transcript: ENST00000376006
  gene symbol: NUDT10
  hgvsc: ENST00000376006.3:c.*24A>C
  variant of: http://identifiers.org/hgnc/17621
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
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  allele num: 6458
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population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Other
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X-51079117-T-C
type: Variant
location: Region
  begin: Position
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    position: 24051079117
    reference: chr 0
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    type: ExactPosition
    position: 24051079117
    reference: chr 0
allele count: 1
allele frequency: 1.206752989730532e-5
allele num: 82867
alternate allele: C
annotation: Annotation
  canonical: true
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  ensembl gene: ENSG00000122824
  ensembl protein: ENSP00000365174
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  gene symbol: NUDT10
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  variant of: http://identifiers.org/hgnc/17621
annotation: Annotation
  canonical: false
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  ensembl gene: ENSG00000122824
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  gene symbol: NUDT10
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  variant of: http://identifiers.org/hgnc/17621
canonical: true
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genotype depth: GenotypeDepth
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population: Latino
population: East Asian
population: South Asian
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reference allele: T
site quality: VQSLOD
site quality: MQ
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X-51079132-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24051079132
    reference: chr 0
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    type: ExactPosition
    position: 24051079132
    reference: chr 0
allele count: 2
allele frequency: 2.410742267544177e-5
allele num: 82962
alternate allele: T
annotation: Annotation
  canonical: true
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  ensembl gene: ENSG00000122824
  ensembl protein: ENSP00000365174
  ensembl transcript: ENST00000376006
  gene symbol: NUDT10
  hgvsc: ENST00000376006.3:c.*41C>T
  variant of: http://identifiers.org/hgnc/17621
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000122824
  ensembl protein: ENSP00000348831
  ensembl transcript: ENST00000356450
  gene symbol: NUDT10
  hgvsc: ENST00000356450.2:c.*41C>T
  variant of: http://identifiers.org/hgnc/17621
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
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population: European (Non-Finnish)
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population: African
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site quality: InbreedingCoeff
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X-51079143-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24051079143
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24051079143
    reference: chr 0
allele count: 2
allele frequency: 2.411527099535781e-5
allele num: 82935
alternate allele: G
annotation: Annotation
  canonical: true
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  ensembl gene: ENSG00000122824
  ensembl protein: ENSP00000365174
  ensembl transcript: ENST00000376006
  gene symbol: NUDT10
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  variant of: http://identifiers.org/hgnc/17621
annotation: Annotation
  canonical: false
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  ensembl gene: ENSG00000122824
  ensembl protein: ENSP00000348831
  ensembl transcript: ENST00000356450
  gene symbol: NUDT10
  hgvsc: ENST00000356450.2:c.*52A>G
  variant of: http://identifiers.org/hgnc/17621
canonical: true
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: Other
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 584
  num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: East Asian
population: South Asian
reference allele: A
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum

X-51149820-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24051149820
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24051149820
    reference: chr 0
allele count: 1
allele frequency: 1.657852417977751e-5
allele num: 60319
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000226530
  ensembl transcript: ENST00000455931
  gene symbol: RP11-348F1.2
  hgvsc: ENST00000455931.1:n.151+10287G>A
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000187690
  ensembl protein: ENSP00000342680
  ensembl transcript: ENST00000342995
  gene symbol: CXorf67
  hgvsc: ENST00000342995.2:c.-49G>A
  variant of: http://identifiers.org/hgnc/33738
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: African
  type: Population
  allele count: 0
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  allele num: 6755
  num of homozygotes: 0
population: South Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: G
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum

X-51149820-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24051149820
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24051149820
    reference: chr 0
allele count: 2
allele frequency: 3.315704835955503e-5
allele num: 60319
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000226530
  ensembl transcript: ENST00000455931
  gene symbol: RP11-348F1.2
  hgvsc: ENST00000455931.1:n.151+10287G>C
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000187690
  ensembl protein: ENSP00000342680
  ensembl transcript: ENST00000342995
  gene symbol: CXorf67
  hgvsc: ENST00000342995.2:c.-49G>C
  variant of: http://identifiers.org/hgnc/33738
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: African
  type: Population
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  allele num: 6755
  num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ

X-51149822-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24051149822
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24051149822
    reference: chr 0
allele count: 4
allele frequency: 6.587398307038635e-5
allele num: 60722
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000226530
  ensembl transcript: ENST00000455931
  gene symbol: RP11-348F1.2
  hgvsc: ENST00000455931.1:n.151+10289C>T
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000187690
  ensembl protein: ENSP00000342680
  ensembl transcript: ENST00000342995
  gene symbol: CXorf67
  hgvsc: ENST00000342995.2:c.-47C>T
  variant of: http://identifiers.org/hgnc/33738
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: Other
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  allele num: 394
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population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: African
population: East Asian
reference allele: C
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: QD

X-51149824-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24051149824
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24051149824
    reference: chr 0
allele count: 1
allele frequency: 1.641012176310348e-5
allele num: 60938
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000226530
  ensembl transcript: ENST00000455931
  gene symbol: RP11-348F1.2
  hgvsc: ENST00000455931.1:n.151+10291G>A
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000187690
  ensembl protein: ENSP00000342680
  ensembl transcript: ENST00000342995
  gene symbol: CXorf67
  hgvsc: ENST00000342995.2:c.-45G>A
  variant of: http://identifiers.org/hgnc/33738
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: Latino
  type: Population
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  allele num: 7399
  num of homozygotes: 0
population: European (Finnish)
population: Other
population: African
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: G
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum

X-51149826-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24051149826
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24051149826
    reference: chr 0
allele count: 1
allele frequency: 1.636152423959816e-5
allele num: 61119
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000187690
  ensembl protein: ENSP00000342680
  ensembl transcript: ENST00000342995
  gene symbol: CXorf67
  hgvsc: ENST00000342995.2:c.-43A>G
  variant of: http://identifiers.org/hgnc/33738
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000226530
  ensembl transcript: ENST00000455931
  gene symbol: RP11-348F1.2
  hgvsc: ENST00000455931.1:n.151+10293A>G
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4437
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 5.75e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 9.25e1
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.5e0
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genotype depth: GenotypeDepth
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  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 1
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 6
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 4.75e1
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genotype quality: GenotypeQuality
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  bin: 7.5e0
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 121
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 5.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 1765
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14998
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 1
  allele frequency: 2.833663927458204e-4
  allele num: 3529
  num of homozygotes: 0
population: Other
population: East Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Latino
reference allele: A
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: MQ

X-51149827-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24051149827
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24051149827
    reference: chr 0
allele count: 0
allele frequency: 0.0e0
allele num: 61155
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000226530
  ensembl transcript: ENST00000455931
  gene symbol: RP11-348F1.2
  hgvsc: ENST00000455931.1:n.151+10294G>A
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000187690
  ensembl protein: ENSP00000342680
  ensembl transcript: ENST00000342995
  gene symbol: CXorf67
  hgvsc: ENST00000342995.2:c.-42G>A
  variant of: http://identifiers.org/hgnc/33738
canonical: true
consequence: 5' UTR
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17670
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  variant carriers: 1
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 407
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  variant carriers: 0
num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 6838
  num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: MQ
site quality: FS
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff

X-51149831-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24051149831
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24051149831
    reference: chr 0
allele count: 4
allele frequency: 6.515082415792559e-5
allele num: 61396
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000187690
  ensembl protein: ENSP00000342680
  ensembl transcript: ENST00000342995
  gene symbol: CXorf67
  hgvsc: ENST00000342995.2:c.-38C>G
  variant of: http://identifiers.org/hgnc/33738
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000226530
  ensembl transcript: ENST00000455931
  gene symbol: RP11-348F1.2
  hgvsc: ENST00000455931.1:n.151+10298C>G
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17784
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 1
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 3
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genotype quality: GenotypeQuality
  all individuals: 4023
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 416
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  variant carriers: 0
num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 7433
  num of homozygotes: 0
population: African
population: Other
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum

X-51149831-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24051149831
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24051149831
    reference: chr 0
allele count: 1
allele frequency: 1.62877060394814e-5
allele num: 61396
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000226530
  ensembl transcript: ENST00000455931
  gene symbol: RP11-348F1.2
  hgvsc: ENST00000455931.1:n.151+10298C>T
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000187690
  ensembl protein: ENSP00000342680
  ensembl transcript: ENST00000342995
  gene symbol: CXorf67
  hgvsc: ENST00000342995.2:c.-38C>T
  variant of: http://identifiers.org/hgnc/33738
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4706
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 28
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  variant carriers: 0
num of homozygotes: 0
population: African
  type: Population
  allele count: 1
  allele frequency: 1.463057790782736e-4
  allele num: 6835
  num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: East Asian
population: South Asian
population: Latino
reference allele: C
site quality: QD
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum

X-51149832-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24051149832
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24051149832
    reference: chr 0
allele count: 0
allele frequency: 0.0e0
allele num: 61799
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000187690
  ensembl protein: ENSP00000342680
  ensembl transcript: ENST00000342995
  gene symbol: CXorf67
  hgvsc: ENST00000342995.2:c.-37A>C
  variant of: http://identifiers.org/hgnc/33738
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000226530
  ensembl transcript: ENST00000455931
  gene symbol: RP11-348F1.2
  hgvsc: ENST00000455931.1:n.151+10299A>C
canonical: true
consequence: 5' UTR
filter: AC_Adj0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4197
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 1618
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 9.75e1
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genotype quality: GenotypeQuality
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  bin: 6.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 8.25e1
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genotype quality: GenotypeQuality
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  bin: 2.5e0
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genotype quality: GenotypeQuality
  all individuals: 1675
  bin: 1.75e1
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genotype quality: GenotypeQuality
  all individuals: 4061
  bin: 3.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 420
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 3609
  num of homozygotes: 0
population: East Asian
population: African
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: Latino
reference allele: A
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD

X-51149832-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24051149832
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24051149832
    reference: chr 0
allele count: 1
allele frequency: 1.61814916098966e-5
allele num: 61799
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000187690
  ensembl protein: ENSP00000342680
  ensembl transcript: ENST00000342995
  gene symbol: CXorf67
  hgvsc: ENST00000342995.2:c.-37A>G
  variant of: http://identifiers.org/hgnc/33738
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000226530
  ensembl transcript: ENST00000455931
  gene symbol: RP11-348F1.2
  hgvsc: ENST00000455931.1:n.151+10299A>G
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4197
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 1914
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  variant carriers: 0
num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 3609
  num of homozygotes: 0
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: East Asian
population: African
reference allele: A
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
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X-51149833-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24051149833
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24051149833
    reference: chr 0
allele count: 3
allele frequency: 4.856412082753262e-5
allele num: 61774
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000187690
  ensembl protein: ENSP00000342680
  ensembl transcript: ENST00000342995
  gene symbol: CXorf67
  hgvsc: ENST00000342995.2:c.-36G>C
  variant of: http://identifiers.org/hgnc/33738
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000226530
  ensembl transcript: ENST00000455931
  gene symbol: RP11-348F1.2
  hgvsc: ENST00000455931.1:n.151+10300G>C
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 1
  allele frequency: 2.825098172161483e-5
  allele num: 35397
  num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: South Asian
population: African
population: Latino
population: Other
reference allele: G
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: QD

X-51149834-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24051149834
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24051149834
    reference: chr 0
allele count: 10
allele frequency: 1.616083260609587e-4
allele num: 61878
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000226530
  ensembl transcript: ENST00000455931
  gene symbol: RP11-348F1.2
  hgvsc: ENST00000455931.1:n.151+10301C>T
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000187690
  ensembl protein: ENSP00000342680
  ensembl transcript: ENST00000342995
  gene symbol: CXorf67
  hgvsc: ENST00000342995.2:c.-35C>T
  variant of: http://identifiers.org/hgnc/33738
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: Other
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 398
  num of homozygotes: 0
population: East Asian
population: African
population: South Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ

X-51149836-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24051149836
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24051149836
    reference: chr 0
allele count: 0
allele frequency: 0.0e0
allele num: 62236
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000187690
  ensembl protein: ENSP00000342680
  ensembl transcript: ENST00000342995
  gene symbol: CXorf67
  hgvsc: ENST00000342995.2:c.-33G>A
  variant of: http://identifiers.org/hgnc/33738
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000226530
  ensembl transcript: ENST00000455931
  gene symbol: RP11-348F1.2
  hgvsc: ENST00000455931.1:n.151+10303G>A
canonical: true
consequence: 5' UTR
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 18109
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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population: Latino
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: G
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X-51149839-C-T
type: Variant
location: Region
  begin: Position
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    reference: chr 0
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    type: ExactPosition
    position: 24051149839
    reference: chr 0
allele count: 20
allele frequency: 3.17576257998952e-4
allele num: 62977
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
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  ensembl gene: ENSG00000226530
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  gene symbol: RP11-348F1.2
  hgvsc: ENST00000455931.1:n.151+10306C>T
annotation: Annotation
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  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000187690
  ensembl protein: ENSP00000342680
  ensembl transcript: ENST00000342995
  gene symbol: CXorf67
  hgvsc: ENST00000342995.2:c.-30C>T
  variant of: http://identifiers.org/hgnc/33738
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
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population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Other
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population: African
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X-51149841-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
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    reference: chr 0
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allele count: 1
allele frequency: 1.57693884631154e-5
allele num: 63414
alternate allele: T
annotation: Annotation
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  gene symbol: CXorf67
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  variant of: http://identifiers.org/hgnc/33738
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
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  ensembl gene: ENSG00000226530
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  gene symbol: RP11-348F1.2
  hgvsc: ENST00000455931.1:n.151+10308C>T
canonical: true
consequence: 5' UTR
filter: PASS
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population: Other
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X-51149844-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24051149844
    reference: chr 0
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    type: ExactPosition
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allele count: 1
allele frequency: 1.562231491462405e-5
allele num: 64011
alternate allele: C
annotation: Annotation
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  ensembl protein: ENSP00000342680
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  gene symbol: CXorf67
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  variant of: http://identifiers.org/hgnc/33738
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000226530
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  gene symbol: RP11-348F1.2
  hgvsc: ENST00000455931.1:n.151+10311G>C
canonical: true
consequence: 5' UTR
filter: PASS
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genotype depth: GenotypeDepth
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X-51149847-C-T
type: Variant
location: Region
  begin: Position
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    reference: chr 0
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allele count: 1
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allele num: 65054
alternate allele: T
annotation: Annotation
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  gene symbol: CXorf67
  hgvsc: ENST00000342995.2:c.-22C>T
  variant of: http://identifiers.org/hgnc/33738
canonical: true
consequence: 5' UTR
filter: PASS
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site quality: MQ
site quality: BaseQRankSum

X-51149849-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24051149849
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24051149849
    reference: chr 0
allele count: 3
allele frequency: 4.570244660430822e-5
allele num: 65642
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000187690
  ensembl protein: ENSP00000342680
  ensembl transcript: ENST00000342995
  gene symbol: CXorf67
  hgvsc: ENST00000342995.2:c.-20C>G
  variant of: http://identifiers.org/hgnc/33738
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000226530
  ensembl transcript: ENST00000455931
  gene symbol: RP11-348F1.2
  hgvsc: ENST00000455931.1:n.151+10316C>G
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1528
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 1
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: Latino
  type: Population
  allele count: 1
  allele frequency: 1.267105930055753e-4
  allele num: 7892
  num of homozygotes: 0
population: European (Finnish)
population: Other
population: East Asian
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: C
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP

X-51149850-T-TG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24051149850
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24051149851
    reference: chr 0
allele count: 19
allele frequency: 2.878002968887273e-4
allele num: 66018
alternate allele: TG
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000187690
  ensembl protein: ENSP00000342680
  ensembl transcript: ENST00000342995
  gene symbol: CXorf67
  hgvsc: ENST00000342995.2:c.-14dupG
  variant of: http://identifiers.org/hgnc/33738
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000226530
  ensembl transcript: ENST00000455931
  gene symbol: RP11-348F1.2
  hgvsc: ENST00000455931.1:n.151+10322dupG
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1485
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  variant carriers: 6
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 1
num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 2945
  num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Latino
population: African
population: Other
reference allele: T
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: MQ

X-51149854-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24051149854
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24051149854
    reference: chr 0
allele count: 1
allele frequency: 1.483019427554501e-5
allele num: 67430
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000187690
  ensembl protein: ENSP00000342680
  ensembl transcript: ENST00000342995
  gene symbol: CXorf67
  hgvsc: ENST00000342995.2:c.-15G>T
  variant of: http://identifiers.org/hgnc/33738
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000226530
  ensembl transcript: ENST00000455931
  gene symbol: RP11-348F1.2
  hgvsc: ENST00000455931.1:n.151+10321G>T
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1607
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 38525
  num of homozygotes: 0
population: African
population: Other
population: Latino
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: G
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: QD

X-51149863-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24051149863
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24051149863
    reference: chr 0
allele count: 21
allele frequency: 2.979230507320395e-4
allele num: 70488
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000187690
  ensembl protein: ENSP00000342680
  ensembl transcript: ENST00000342995
  gene symbol: CXorf67
  hgvsc: ENST00000342995.2:c.-6G>A
  variant of: http://identifiers.org/hgnc/33738
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000226530
  ensembl transcript: ENST00000455931
  gene symbol: RP11-348F1.2
  hgvsc: ENST00000455931.1:n.151+10330G>A
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1214
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 1
population: Latino
  type: Population
  allele count: 1
  allele frequency: 1.200768491834774e-4
  allele num: 8328
  num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff

X-51149865-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24051149865
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24051149865
    reference: chr 0
allele count: 1
allele frequency: 1.405995163376638e-5
allele num: 71124
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000187690
  ensembl protein: ENSP00000342680
  ensembl transcript: ENST00000342995
  gene symbol: CXorf67
  hgvsc: ENST00000342995.2:c.-4C>A
  variant of: http://identifiers.org/hgnc/33738
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000226530
  ensembl transcript: ENST00000455931
  gene symbol: RP11-348F1.2
  hgvsc: ENST00000455931.1:n.151+10332C>A
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7892
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 1
  allele frequency: 1.665833749791771e-4
  allele num: 6003
  num of homozygotes: 0
population: Latino
population: South Asian
population: Other
population: European (Finnish)
population: African
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS

X-51149865-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24051149865
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24051149865
    reference: chr 0
allele count: 1
allele frequency: 1.405995163376638e-5
allele num: 71124
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000226530
  ensembl transcript: ENST00000455931
  gene symbol: RP11-348F1.2
  hgvsc: ENST00000455931.1:n.151+10332C>T
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000187690
  ensembl protein: ENSP00000342680
  ensembl transcript: ENST00000342995
  gene symbol: CXorf67
  hgvsc: ENST00000342995.2:c.-4C>T
  variant of: http://identifiers.org/hgnc/33738
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
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  bin: 8.75e1
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: East Asian
  type: Population
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  allele num: 6003
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population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: African
population: Latino
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: BaseQRankSum
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site quality: QD
site quality: FS
site quality: VQSLOD
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site quality: DP
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X-51149866-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24051149866
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24051149866
    reference: chr 0
allele count: 8
allele frequency: 1.114407901152019e-4
allele num: 71787
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000187690
  ensembl protein: ENSP00000342680
  ensembl transcript: ENST00000342995
  gene symbol: CXorf67
  hgvsc: ENST00000342995.2:c.-3G>A
  variant of: http://identifiers.org/hgnc/33738
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000226530
  ensembl transcript: ENST00000455931
  gene symbol: RP11-348F1.2
  hgvsc: ENST00000455931.1:n.151+10333G>A
canonical: true
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
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population: African
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population: East Asian
population: European (Finnish)
population: Other
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: MQ
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site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD

X-51149870-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24051149870
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24051149870
    reference: chr 0
allele count: 1
allele frequency: 1.367278295824332e-5
allele num: 73138
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: start_lost
  ensembl gene: ENSG00000187690
  ensembl protein: ENSP00000342680
  ensembl transcript: ENST00000342995
  gene symbol: CXorf67
  hgvsc: ENST00000342995.2:c.2T>A
  hgvsp: ENSP00000342680.2:p.Met1?
  variant of: http://identifiers.org/hgnc/33738
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000226530
  ensembl transcript: ENST00000455931
  gene symbol: RP11-348F1.2
  hgvsc: ENST00000455931.1:n.151+10337T>A
canonical: true
consequence: start lost
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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hgvs: p.Met1?
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population: Latino
  type: Population
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  allele num: 8518
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population: African
population: Other
population: South Asian
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: T
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
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site quality: DP

X-51149887-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24051149887
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24051149887
    reference: chr 0
allele count: 1
allele frequency: 1.300542326150005e-5
allele num: 76891
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000187690
  ensembl protein: ENSP00000342680
  ensembl transcript: ENST00000342995
  gene symbol: CXorf67
  hgvsc: ENST00000342995.2:c.19A>G
  hgvsp: ENSP00000342680.2:p.Met7Val
  variant of: http://identifiers.org/hgnc/33738
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000226530
  ensembl transcript: ENST00000455931
  gene symbol: RP11-348F1.2
  hgvsc: ENST00000455931.1:n.151+10354A>G
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 124
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 7.25e1
  variant carriers: 0
hgvs: p.Met7Val
num of homozygotes: 0
population: Other
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 512
  num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
population: South Asian
reference allele: A
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: QD

X-51149888-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24051149888
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24051149888
    reference: chr 0
allele count: 4
allele frequency: 5.191434133679429e-5
allele num: 77050
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000187690
  ensembl protein: ENSP00000342680
  ensembl transcript: ENST00000342995
  gene symbol: CXorf67
  hgvsc: ENST00000342995.2:c.20T>C
  hgvsp: ENSP00000342680.2:p.Met7Thr
  variant of: http://identifiers.org/hgnc/33738
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000226530
  ensembl transcript: ENST00000455931
  gene symbol: RP11-348F1.2
  hgvsc: ENST00000455931.1:n.151+10355T>C
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Met7Thr
num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 43514
  num of homozygotes: 0
population: South Asian
population: Other
population: Latino
population: European (Finnish)
population: East Asian
population: African
reference allele: T
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP

X-51149914-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24051149914
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24051149914
    reference: chr 0
allele count: 1
allele frequency: 1.252473635429974e-5
allele num: 79842
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000187690
  ensembl protein: ENSP00000342680
  ensembl transcript: ENST00000342995
  gene symbol: CXorf67
  hgvsc: ENST00000342995.2:c.46G>A
  hgvsp: ENSP00000342680.2:p.Asp16Asn
  variant of: http://identifiers.org/hgnc/33738
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000226530
  ensembl transcript: ENST00000455931
  gene symbol: RP11-348F1.2
  hgvsc: ENST00000455931.1:n.151+10381G>A
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Asp16Asn
num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 3732
  num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: BaseQRankSum

X-51149916-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24051149916
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24051149916
    reference: chr 0
allele count: 1
allele frequency: 1.252426576491953e-5
allele num: 79845
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000187690
  ensembl protein: ENSP00000342680
  ensembl transcript: ENST00000342995
  gene symbol: CXorf67
  hgvsc: ENST00000342995.2:c.48C>A
  hgvsp: ENSP00000342680.2:p.Asp16Glu
  variant of: http://identifiers.org/hgnc/33738
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000226530
  ensembl transcript: ENST00000455931
  gene symbol: RP11-348F1.2
  hgvsc: ENST00000455931.1:n.151+10383C>A
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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hgvs: p.Asp16Glu
num of homozygotes: 0
population: African
  type: Population
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  allele frequency: 0.0e0
  allele num: 7976
  num of homozygotes: 0
population: East Asian
population: Latino
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ

X-51149916-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24051149916
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24051149916
    reference: chr 0
allele count: 1
allele frequency: 1.252426576491953e-5
allele num: 79845
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000187690
  ensembl protein: ENSP00000342680
  ensembl transcript: ENST00000342995
  gene symbol: CXorf67
  hgvsc: ENST00000342995.2:c.48C>T
  hgvsp: ENST00000342995.2:c.48C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/33738
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000226530
  ensembl transcript: ENST00000455931
  gene symbol: RP11-348F1.2
  hgvsc: ENST00000455931.1:n.151+10383C>T
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 321
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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hgvs: p.Asp16Asp
num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 8898
  num of homozygotes: 0
population: African
population: South Asian
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff

X-51149917-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24051149917
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24051149917
    reference: chr 0
allele count: 3
allele frequency: 3.752439085405514e-5
allele num: 79948
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000226530
  ensembl transcript: ENST00000455931
  gene symbol: RP11-348F1.2
  hgvsc: ENST00000455931.1:n.151+10384G>A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000187690
  ensembl protein: ENSP00000342680
  ensembl transcript: ENST00000342995
  gene symbol: CXorf67
  hgvsc: ENST00000342995.2:c.49G>A
  hgvsp: ENSP00000342680.2:p.Glu17Lys
  variant of: http://identifiers.org/hgnc/33738
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 1
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 1
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 6.75e1
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genotype quality: GenotypeQuality
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  bin: 9.75e1
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genotype quality: GenotypeQuality
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  bin: 7.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37209
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Glu17Lys
num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 6391
  num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: Other
population: European (Finnish)
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum

X-51149920-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24051149920
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24051149920
    reference: chr 0
allele count: 5
allele frequency: 6.231461402328073e-5
allele num: 80238
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000187690
  ensembl protein: ENSP00000342680
  ensembl transcript: ENST00000342995
  gene symbol: CXorf67
  hgvsc: ENST00000342995.2:c.52G>A
  hgvsp: ENSP00000342680.2:p.Gly18Arg
  variant of: http://identifiers.org/hgnc/33738
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000226530
  ensembl transcript: ENST00000455931
  gene symbol: RP11-348F1.2
  hgvsc: ENST00000455931.1:n.151+10387G>A
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 8.25e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 37
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  variant carriers: 0
hgvs: p.Gly18Arg
num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 8063
  num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: Other
population: European (Finnish)
population: East Asian
population: African
reference allele: G
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD

X-51149921-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24051149921
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24051149921
    reference: chr 0
allele count: 1
allele frequency: 1.24512843499807e-5
allele num: 80313
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000226530
  ensembl transcript: ENST00000455931
  gene symbol: RP11-348F1.2
  hgvsc: ENST00000455931.1:n.151+10388G>A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000187690
  ensembl protein: ENSP00000342680
  ensembl transcript: ENST00000342995
  gene symbol: CXorf67
  hgvsc: ENST00000342995.2:c.53G>A
  hgvsp: ENSP00000342680.2:p.Gly18Glu
  variant of: http://identifiers.org/hgnc/33738
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 32191
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
hgvs: p.Gly18Glu
num of homozygotes: 0
population: Other
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 550
  num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Latino
population: European (Finnish)
population: African
population: South Asian
reference allele: G
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum

X-51149922-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24051149922
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24051149922
    reference: chr 0
allele count: 1
allele frequency: 1.244229883913352e-5
allele num: 80371
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000187690
  ensembl protein: ENSP00000342680
  ensembl transcript: ENST00000342995
  gene symbol: CXorf67
  hgvsc: ENST00000342995.2:c.54G>C
  hgvsp: ENST00000342995.2:c.54G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/33738
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000226530
  ensembl transcript: ENST00000455931
  gene symbol: RP11-348F1.2
  hgvsc: ENST00000455931.1:n.151+10389G>C
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 667
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  variant carriers: 0
hgvs: p.Gly18Gly
num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 7988
  num of homozygotes: 0
population: Latino
population: South Asian
population: European (Finnish)
population: Other
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP

X-51149933-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24051149933
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24051149933
    reference: chr 0
allele count: 1
allele frequency: 1.236659535263347e-5
allele num: 80863
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000226530
  ensembl transcript: ENST00000455931
  gene symbol: RP11-348F1.2
  hgvsc: ENST00000455931.1:n.151+10400T>A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000187690
  ensembl protein: ENSP00000342680
  ensembl transcript: ENST00000342995
  gene symbol: CXorf67
  hgvsc: ENST00000342995.2:c.65T>A
  hgvsp: ENSP00000342680.2:p.Leu22Gln
  variant of: http://identifiers.org/hgnc/33738
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Leu22Gln
num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 1
  allele frequency: 2.236836218852056e-5
  allele num: 44706
  num of homozygotes: 0
population: East Asian
population: Other
population: South Asian
population: Latino
population: European (Finnish)
population: African
reference allele: T
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
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site quality: QD

X-51149950-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24051149950
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24051149950
    reference: chr 0
allele count: 1
allele frequency: 1.236674828720536e-5
allele num: 80862
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000226530
  ensembl transcript: ENST00000455931
  gene symbol: RP11-348F1.2
  hgvsc: ENST00000455931.1:n.151+10417C>T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000187690
  ensembl protein: ENSP00000342680
  ensembl transcript: ENST00000342995
  gene symbol: CXorf67
  hgvsc: ENST00000342995.2:c.82C>T
  hgvsp: ENSP00000342680.2:p.Leu28Phe
  variant of: http://identifiers.org/hgnc/33738
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Leu28Phe
num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 7945
  num of homozygotes: 0
population: East Asian
population: Latino
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: QD
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X-51149956-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24051149956
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24051149956
    reference: chr 0
allele count: 25
allele frequency: 3.09088436383418e-4
allele num: 80883
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000226530
  ensembl transcript: ENST00000455931
  gene symbol: RP11-348F1.2
  hgvsc: ENST00000455931.1:n.151+10423T>A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000187690
  ensembl protein: ENSP00000342680
  ensembl transcript: ENST00000342995
  gene symbol: CXorf67
  hgvsc: ENST00000342995.2:c.88T>A
  hgvsp: ENSP00000342680.2:p.Ser30Thr
  variant of: http://identifiers.org/hgnc/33738
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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hgvs: p.Ser30Thr
num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 19
  allele frequency: 4.260471791192035e-4
  allele num: 44596
  num of homozygotes: 0
population: South Asian
population: African
population: East Asian
population: Latino
population: European (Finnish)
population: Other
reference allele: T
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: DP

X-51149959-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24051149959
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24051149959
    reference: chr 0
allele count: 15
allele frequency: 1.857976292222511e-4
allele num: 80733
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000226530
  ensembl transcript: ENST00000455931
  gene symbol: RP11-348F1.2
  hgvsc: ENST00000455931.1:n.151+10426G>A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000187690
  ensembl protein: ENSP00000342680
  ensembl transcript: ENST00000342995
  gene symbol: CXorf67
  hgvsc: ENST00000342995.2:c.91G>A
  hgvsp: ENSP00000342680.2:p.Gly31Arg
  variant of: http://identifiers.org/hgnc/33738
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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hgvs: p.Gly31Arg
num of homozygotes: 0
population: Other
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 555
  num of homozygotes: 0
population: African
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: East Asian
reference allele: G
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
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site quality: VQSLOD
site quality: DP
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X-51149967-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24051149967
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24051149967
    reference: chr 0
allele count: 2
allele frequency: 2.474390062849507e-5
allele num: 80828
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000187690
  ensembl protein: ENSP00000342680
  ensembl transcript: ENST00000342995
  gene symbol: CXorf67
  hgvsc: ENST00000342995.2:c.99C>G
  hgvsp: ENST00000342995.2:c.99C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/33738
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000226530
  ensembl transcript: ENST00000455931
  gene symbol: RP11-348F1.2
  hgvsc: ENST00000455931.1:n.151+10434C>G
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Ala33Ala
num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 44543
  num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: South Asian
population: Other
reference allele: C
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum

X-51149971-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24051149971
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24051149971
    reference: chr 0
allele count: 46
allele frequency: 5.699841395717685e-4
allele num: 80704
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000226530
  ensembl transcript: ENST00000455931
  gene symbol: RP11-348F1.2
  hgvsc: ENST00000455931.1:n.151+10438G>A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000187690
  ensembl protein: ENSP00000342680
  ensembl transcript: ENST00000342995
  gene symbol: CXorf67
  hgvsc: ENST00000342995.2:c.103G>A
  hgvsp: ENSP00000342680.2:p.Gly35Arg
  variant of: http://identifiers.org/hgnc/33738
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
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  variant carriers: 1
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Gly35Arg
num of homozygotes: 0
population: Other
  type: Population
  allele count: 1
  allele frequency: 1.798561151079137e-3
  allele num: 556
  num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
reference allele: G
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: QD

X-51149973-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24051149973
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24051149973
    reference: chr 0
allele count: 4
allele frequency: 4.952947003467063e-5
allele num: 80760
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000226530
  ensembl transcript: ENST00000455931
  gene symbol: RP11-348F1.2
  hgvsc: ENST00000455931.1:n.151+10440G>A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000187690
  ensembl protein: ENSP00000342680
  ensembl transcript: ENST00000342995
  gene symbol: CXorf67
  hgvsc: ENST00000342995.2:c.105G>A
  hgvsp: ENST00000342995.2:c.105G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/33738
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
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  bin: 7.5e0
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Gly35Gly
num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 3624
  num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Latino
population: South Asian
population: African
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD

X-51149977-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24051149977
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24051149977
    reference: chr 0
allele count: 1
allele frequency: 1.241511167392951e-5
allele num: 80547
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000187690
  ensembl protein: ENSP00000342680
  ensembl transcript: ENST00000342995
  gene symbol: CXorf67
  hgvsc: ENST00000342995.2:c.109G>C
  hgvsp: ENSP00000342680.2:p.Gly37Arg
  variant of: http://identifiers.org/hgnc/33738
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000226530
  ensembl transcript: ENST00000455931
  gene symbol: RP11-348F1.2
  hgvsc: ENST00000455931.1:n.151+10444G>C
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 26597
  bin: 2.25e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Gly37Arg
num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 8833
  num of homozygotes: 0
population: Other
population: South Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
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site quality: ClippingRankSum

X-51149978-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24051149978
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24051149978
    reference: chr 0
allele count: 1
allele frequency: 1.23978725250747e-5
allele num: 80659
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000187690
  ensembl protein: ENSP00000342680
  ensembl transcript: ENST00000342995
  gene symbol: CXorf67
  hgvsc: ENST00000342995.2:c.110G>A
  hgvsp: ENSP00000342680.2:p.Gly37Glu
  variant of: http://identifiers.org/hgnc/33738
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000226530
  ensembl transcript: ENST00000455931
  gene symbol: RP11-348F1.2
  hgvsc: ENST00000455931.1:n.151+10445G>A
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5581
  bin: 1.75e1
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3453
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Gly37Glu
num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 8861
  num of homozygotes: 0
population: South Asian
population: East Asian
population: African
population: Other
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD

X-51149984-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24051149984
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24051149984
    reference: chr 0
allele count: 2
allele frequency: 2.479236395190281e-5
allele num: 80670
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000226530
  ensembl transcript: ENST00000455931
  gene symbol: RP11-348F1.2
  hgvsc: ENST00000455931.1:n.151+10451A>G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000187690
  ensembl protein: ENSP00000342680
  ensembl transcript: ENST00000342995
  gene symbol: CXorf67
  hgvsc: ENST00000342995.2:c.116A>G
  hgvsp: ENSP00000342680.2:p.Gln39Arg
  variant of: http://identifiers.org/hgnc/33738
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Gln39Arg
num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 8870
  num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: East Asian
population: African
population: Other
population: European (Non-Finnish)
reference allele: A
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: VQSLOD

X-51149986-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24051149986
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24051149986
    reference: chr 0
allele count: 4
allele frequency: 4.960809604127394e-5
allele num: 80632
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000226530
  ensembl transcript: ENST00000455931
  gene symbol: RP11-348F1.2
  hgvsc: ENST00000455931.1:n.151+10453G>A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000187690
  ensembl protein: ENSP00000342680
  ensembl transcript: ENST00000342995
  gene symbol: CXorf67
  hgvsc: ENST00000342995.2:c.118G>A
  hgvsp: ENSP00000342680.2:p.Asp40Asn
  variant of: http://identifiers.org/hgnc/33738
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Asp40Asn
num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 8929
  num of homozygotes: 0
population: Other
population: Latino
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
reference allele: G
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum

X-51150000-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24051150000
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24051150000
    reference: chr 0
allele count: 1
allele frequency: 1.242915382320772e-5
allele num: 80456
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000187690
  ensembl protein: ENSP00000342680
  ensembl transcript: ENST00000342995
  gene symbol: CXorf67
  hgvsc: ENST00000342995.2:c.132C>G
  hgvsp: ENST00000342995.2:c.132C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/33738
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000226530
  ensembl transcript: ENST00000455931
  gene symbol: RP11-348F1.2
  hgvsc: ENST00000455931.1:n.151+10467C>G
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Ser44Ser
num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 1
  allele frequency: 1.118193000111819e-4
  allele num: 8943
  num of homozygotes: 0
population: East Asian
population: African
population: Other
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: QD

X-51150001-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24051150001
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24051150001
    reference: chr 0
allele count: 3
allele frequency: 3.725597337439769e-5
allele num: 80524
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000187690
  ensembl protein: ENSP00000342680
  ensembl transcript: ENST00000342995
  gene symbol: CXorf67
  hgvsc: ENST00000342995.2:c.133G>T
  hgvsp: ENSP00000342680.2:p.Val45Phe
  variant of: http://identifiers.org/hgnc/33738
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000226530
  ensembl transcript: ENST00000455931
  gene symbol: RP11-348F1.2
  hgvsc: ENST00000455931.1:n.151+10468G>T
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Val45Phe
num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 6325
  num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Latino
population: African
reference allele: G
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: DP

X-51150007-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24051150007
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24051150007
    reference: chr 0
allele count: 1
allele frequency: 1.239049896539334e-5
allele num: 80707
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000226530
  ensembl transcript: ENST00000455931
  gene symbol: RP11-348F1.2
  hgvsc: ENST00000455931.1:n.151+10474A>C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000187690
  ensembl protein: ENSP00000342680
  ensembl transcript: ENST00000342995
  gene symbol: CXorf67
  hgvsc: ENST00000342995.2:c.139A>C
  hgvsp: ENSP00000342680.2:p.Thr47Pro
  variant of: http://identifiers.org/hgnc/33738
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
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  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 1
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 37635
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  variant carriers: 0
hgvs: p.Thr47Pro
num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 7895
  num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
reference allele: A
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: MQ

X-51150011-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24051150011
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24051150011
    reference: chr 0
allele count: 1
allele frequency: 1.238466778128677e-5
allele num: 80745
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000187690
  ensembl protein: ENSP00000342680
  ensembl transcript: ENST00000342995
  gene symbol: CXorf67
  hgvsc: ENST00000342995.2:c.143T>G
  hgvsp: ENSP00000342680.2:p.Val48Gly
  variant of: http://identifiers.org/hgnc/33738
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000226530
  ensembl transcript: ENST00000455931
  gene symbol: RP11-348F1.2
  hgvsc: ENST00000455931.1:n.151+10478T>G
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7548
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2760
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 183
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Val48Gly
num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 44498
  num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Finnish)
population: Other
population: Latino
population: African
reference allele: T
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: VQSLOD

X-51150015-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24051150015
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24051150015
    reference: chr 0
allele count: 0
allele frequency: 0.0e0
allele num: 80728
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000187690
  ensembl protein: ENSP00000342680
  ensembl transcript: ENST00000342995
  gene symbol: CXorf67
  hgvsc: ENST00000342995.2:c.147C>T
  hgvsp: ENST00000342995.2:c.147C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/33738
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000226530
  ensembl transcript: ENST00000455931
  gene symbol: RP11-348F1.2
  hgvsc: ENST00000455931.1:n.151+10482C>T
canonical: true
consequence: synonymous
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 12346
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Ser49Ser
num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 44474
  num of homozygotes: 0
population: Other
population: Latino
population: East Asian
population: African
population: South Asian
population: European (Finnish)
reference allele: C
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum

X-51150018-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24051150018
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24051150018
    reference: chr 0
allele count: 1
allele frequency: 1.240556265429419e-5
allele num: 80609
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000226530
  ensembl transcript: ENST00000455931
  gene symbol: RP11-348F1.2
  hgvsc: ENST00000455931.1:n.151+10485C>T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000187690
  ensembl protein: ENSP00000342680
  ensembl transcript: ENST00000342995
  gene symbol: CXorf67
  hgvsc: ENST00000342995.2:c.150C>T
  hgvsp: ENST00000342995.2:c.150C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/33738
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Ser50Ser
num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 6329
  num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Other
population: African
population: European (Finnish)
population: Latino
reference allele: C
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: ClippingRankSum

X-51150032-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24051150032
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24051150032
    reference: chr 0
allele count: 1
allele frequency: 1.261399901610808e-5
allele num: 79277
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000187690
  ensembl protein: ENSP00000342680
  ensembl transcript: ENST00000342995
  gene symbol: CXorf67
  hgvsc: ENST00000342995.2:c.164C>G
  hgvsp: ENSP00000342680.2:p.Ser55Trp
  variant of: http://identifiers.org/hgnc/33738
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000226530
  ensembl transcript: ENST00000455931
  gene symbol: RP11-348F1.2
  hgvsc: ENST00000455931.1:n.151+10499C>G
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6361
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25266
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4875
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9144
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11777
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 695
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ser55Trp
num of homozygotes: 0
reference allele: C

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 556
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8795
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7695
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7561
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4073
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 43527
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.774e0

DP
type: SiteQuality
SIO_000300: 1.377884e6

FS
type: SiteQuality
SIO_000300: 2.813e0

MQRankSum
type: SiteQuality
SIO_000300: 7.27e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.9e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -2.18e0

QD
type: SiteQuality
SIO_000300: 2.365e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.398e0

MQ
type: SiteQuality
SIO_000300: 4.356e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.39e-1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7572
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6120
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 557
num of homozygotes: 0

Latino
type: Population
allele count: 4
allele frequency: 4.545971133083305e-4
allele num: 8799
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4080
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 43555
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.736e0

QD
type: SiteQuality
SIO_000300: 1.195e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.26e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.2e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.93e-1

MQRankSum
type: SiteQuality
SIO_000300: -4.96e-1

DP
type: SiteQuality
SIO_000300: 1.378038e6

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 4.036e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.114e0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6066
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8718
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4068
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7689
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 43180
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 549
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 6.776e0

QD
type: SiteQuality
SIO_000300: 1.384e1

DP
type: SiteQuality
SIO_000300: 1.348536e6

MQRankSum
type: SiteQuality
SIO_000300: 4.38e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.269e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.6e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.51e-1

MQ
type: SiteQuality
SIO_000300: 4.873e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.949e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.36e-1

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 43180
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7689
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8718
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4068
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 549
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.36930028755306e-4
allele num: 7303
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.348536e6

VQSLOD
type: SiteQuality
SIO_000300: -1.269e0

MQRankSum
type: SiteQuality
SIO_000300: 4.38e-1

QD
type: SiteQuality
SIO_000300: 1.384e1

FS
type: SiteQuality
SIO_000300: 6.776e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.6e-3

MQ
type: SiteQuality
SIO_000300: 4.873e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.51e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.949e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.36e-1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4030
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 4.658746797111577e-5
allele num: 42930
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6046
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 544
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7151
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7667
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.5e-1

VQSLOD
type: SiteQuality
SIO_000300: -9.87e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.3e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.6e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 4.315e1

MQRankSum
type: SiteQuality
SIO_000300: 1.3e-1

DP
type: SiteQuality
SIO_000300: 1.318691e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.4e-1

QD
type: SiteQuality
SIO_000300: 1.782e1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 543
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.305483028720627e-4
allele num: 7660
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8661
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.331219694143976e-5
allele num: 42896
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4031
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.401738155312588e-4
allele num: 7134
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.211e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.174e0

VQSLOD
type: SiteQuality
SIO_000300: -1.08e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.77e0

MQ
type: SiteQuality
SIO_000300: 4.234e1

FS
type: SiteQuality
SIO_000300: 4.1852e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.3e-3

MQRankSum
type: SiteQuality
SIO_000300: -1.956e0

DP
type: SiteQuality
SIO_000300: 1.309269e6

QD
type: SiteQuality
SIO_000300: 2.7e1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6018
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4023
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7650
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7067
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 542
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 4.36e1

MQRankSum
type: SiteQuality
SIO_000300: 8.53e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.74e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 2.411e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.18e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.785e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

DP
type: SiteQuality
SIO_000300: 1.303523e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.85e-1

South Asian
type: Population
allele count: 2
allele frequency: 2.869028833739779e-4
allele num: 6971
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.314405888538381e-4
allele num: 7608
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4016
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6012
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 540
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.277307e6

VQSLOD
type: SiteQuality
SIO_000300: -6.29e0

MQRankSum
type: SiteQuality
SIO_000300: -2.179e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.67e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.36e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.1e-3

FS
type: SiteQuality
SIO_000300: 2.9521e1

QD
type: SiteQuality
SIO_000300: 2.977e1

MQ
type: SiteQuality
SIO_000300: 4.279e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.54e0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7517
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3960
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8550
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6527
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 9.520635978483362e-5
allele num: 42014
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 530
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.067e0

DP
type: SiteQuality
SIO_000300: 1.209538e6

FS
type: SiteQuality
SIO_000300: 1.003e0

MQ
type: SiteQuality
SIO_000300: 4.104e1

MQRankSum
type: SiteQuality
SIO_000300: -2.278e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.179e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.3e0

VQSLOD
type: SiteQuality
SIO_000300: -3.935e0

QD
type: SiteQuality
SIO_000300: 2.84e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.4e-3

Latino
type: Population
allele count: 2
allele frequency: 2.408767915211369e-4
allele num: 8303
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3771
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.740644038294169e-4
allele num: 5745
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5890
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 507
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 10
allele frequency: 2.47843759294141e-4
allele num: 40348
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.069e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.594e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

MQ
type: SiteQuality
SIO_000300: 4.322e1

FS
type: SiteQuality
SIO_000300: 7.142e0

VQSLOD
type: SiteQuality
SIO_000300: -2.618e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.79e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.489e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.3e-1

DP
type: SiteQuality
SIO_000300: 1.137897e6

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4271
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8866
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.65809981760902e-4
allele num: 6031
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 42791
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 558
num of homozygotes: 0

African
type: Population
allele count: 4
allele frequency: 5.011903270266884e-4
allele num: 7981
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.83e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 8.599999999999999e-2

MQ
type: SiteQuality
SIO_000300: 5.951e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.39e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.6e-3

QD
type: SiteQuality
SIO_000300: 9.09e0

DP
type: SiteQuality
SIO_000300: 1.629835e6

VQSLOD
type: SiteQuality
SIO_000300: 2.84e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.350000000000001e-1

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 42806
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7185
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6050
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.251564455569462e-4
allele num: 7990
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 558
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8870
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -4.78e-1

QD
type: SiteQuality
SIO_000300: 1.328e1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.71e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.73e0

FS
type: SiteQuality
SIO_000300: 1.176e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.2e-3

DP
type: SiteQuality
SIO_000300: 1.650102e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.12e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.783e0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6069
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 562
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7279
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4278
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.124353496739375e-4
allele num: 8894
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 43009
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-3

MQ
type: SiteQuality
SIO_000300: 5.956e1

QD
type: SiteQuality
SIO_000300: 6.25e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.01e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.67e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.26e-1

FS
type: SiteQuality
SIO_000300: 3.927e0

MQRankSum
type: SiteQuality
SIO_000300: -2.18e-1

DP
type: SiteQuality
SIO_000300: 1.680425e6

VQSLOD
type: SiteQuality
SIO_000300: -8.749e-1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8052
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 566
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4301
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 43314
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.120322652924042e-4
allele num: 8926
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6125
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.7e-3

MQRankSum
type: SiteQuality
SIO_000300: 1.44e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.44e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 1.61e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.41e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.41e-1

FS
type: SiteQuality
SIO_000300: 3.274e0

DP
type: SiteQuality
SIO_000300: 1.725619e6

QD
type: SiteQuality
SIO_000300: 1.015e1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6198
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 571
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8094
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8970
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4326
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 4.573414740115708e-5
allele num: 43731
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.34e0

VQSLOD
type: SiteQuality
SIO_000300: 6.840000000000001e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.16e-1

FS
type: SiteQuality
SIO_000300: 2.295e0

QD
type: SiteQuality
SIO_000300: 1.5e1

DP
type: SiteQuality
SIO_000300: 1.762295e6

MQRankSum
type: SiteQuality
SIO_000300: 7.65e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.5e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 7.36e-1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 572
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4334
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9000
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8114
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.30872922392357e-4
allele num: 7641
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 43897
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BaseQRankSum
type: SiteQuality
SIO_000300: 1.97e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.98e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 2.968e1

VQSLOD
type: SiteQuality
SIO_000300: -3.544e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -9.74e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.8e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.4e-3

DP
type: SiteQuality
SIO_000300: 1.776303e6

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6401
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8078
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 582
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European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 45161
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8240
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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BaseQRankSum
type: SiteQuality
SIO_000300: -1.737e0

FS
type: SiteQuality
SIO_000300: 2.199e0

VQSLOD
type: SiteQuality
SIO_000300: 1.61e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.3e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.443e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.72e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.02e-1

DP
type: SiteQuality
SIO_000300: 1.846826e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.2e0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 581
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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South Asian
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allele frequency: 1.232134056185313e-4
allele num: 8116
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European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 45290
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 9135
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4419
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DP
type: SiteQuality
SIO_000300: 1.849922e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.06e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.41e-1

QD
type: SiteQuality
SIO_000300: 5.47e0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -2.856e0

MQRankSum
type: SiteQuality
SIO_000300: -4.23e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.223e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

MQ
type: SiteQuality
SIO_000300: 5.855e1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9152
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 45429
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.226241569589209e-4
allele num: 8155
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6432
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4429
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 585
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InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

FS
type: SiteQuality
SIO_000300: 9.389999999999999e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.03e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.64e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.854322e6

MQRankSum
type: SiteQuality
SIO_000300: -2.57e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.58e-1

QD
type: SiteQuality
SIO_000300: 8.08e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.66e-1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6432
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.201237095247529e-5
allele num: 45429
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8155
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8276
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9152
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4429
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.03e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -2.57e-1

DP
type: SiteQuality
SIO_000300: 1.854322e6

BaseQRankSum
type: SiteQuality
SIO_000300: 2.64e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

QD
type: SiteQuality
SIO_000300: 8.08e0

FS
type: SiteQuality
SIO_000300: 9.389999999999999e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.66e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.58e-1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9167
num of homozygotes: 0

South Asian
type: Population
allele count: 0
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allele num: 8205
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6446
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8286
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4435
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 4.389044943820225e-5
allele num: 45568
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.08e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 2.004e1

DP
type: SiteQuality
SIO_000300: 1.855654e6

VQSLOD
type: SiteQuality
SIO_000300: -2.193e0

MQRankSum
type: SiteQuality
SIO_000300: 4.25e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.31e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.217e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.61e0

FS
type: SiteQuality
SIO_000300: 1.603e0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6452
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8217
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 45607
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9170
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 586
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African
type: Population
allele count: 1
allele frequency: 1.20598166907863e-4
allele num: 8292
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InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 1.9e0

DP
type: SiteQuality
SIO_000300: 1.856856e6

BaseQRankSum
type: SiteQuality
SIO_000300: 9.81e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.8e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 4.508e0

MQRankSum
type: SiteQuality
SIO_000300: 5.4e-1

QD
type: SiteQuality
SIO_000300: 1.295e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.8e-1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9173
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.191444600280505e-5
allele num: 45632
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4443
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8296
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Other
type: Population
allele count: 0
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allele num: 586
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8222
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BaseQRankSum
type: SiteQuality
SIO_000300: 4.42e0

MQ
type: SiteQuality
SIO_000300: 5.982e1

VQSLOD
type: SiteQuality
SIO_000300: -4.256e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.070000000000001e-1

QD
type: SiteQuality
SIO_000300: 1.556e1

MQRankSum
type: SiteQuality
SIO_000300: 1.95e0

FS
type: SiteQuality
SIO_000300: 3.587e0

DP
type: SiteQuality
SIO_000300: 1.855887e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.17e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8300
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4443
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9173
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6460
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8234
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 587
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VQSLOD
type: SiteQuality
SIO_000300: 1.66e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.856187e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.24e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 2.813e1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4450
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 45755
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 2.1767522855899e-4
allele num: 9188
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8311
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 590
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VQSLOD
type: SiteQuality
SIO_000300: 3.32e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.2e-3

FS
type: SiteQuality
SIO_000300: 2.453e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.37e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.851616e6

QD
type: SiteQuality
SIO_000300: 9.65e0

MQRankSum
type: SiteQuality
SIO_000300: 9.86e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.37e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.609e0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8310
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 45806
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4453
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9194
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East Asian
type: Population
allele count: 2
allele frequency: 3.083564600678384e-4
allele num: 6486
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South Asian
type: Population
allele count: 0
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allele num: 8102
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ReadPosRankSum
type: SiteQuality
SIO_000300: 2.5e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.500000000000001e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.859173e6

MQRankSum
type: SiteQuality
SIO_000300: -7.16e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -2.045e0

QD
type: SiteQuality
SIO_000300: 2.264e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.23e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.19e-1

South Asian
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allele count: 0
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Latino
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2628
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 2.892012262131992e-5
allele num: 34578
num of homozygotes: 0

East Asian
type: Population
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Other
type: Population
allele count: 0
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allele num: 388
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DP
type: SiteQuality
SIO_000300: 7.99932e5

ClippingRankSum
type: SiteQuality
SIO_000300: 3.3e-2

VQSLOD
type: SiteQuality
SIO_000300: 2.71e0

QD
type: SiteQuality
SIO_000300: 1.464e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.88e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.43e-1

FS
type: SiteQuality
SIO_000300: 2.824e0

MQRankSum
type: SiteQuality
SIO_000300: -3.0e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.08e-1

East Asian
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allele count: 2
allele frequency: 3.853564547206166e-4
allele num: 5190
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South Asian
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allele num: 3471
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 2628
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 34578
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7309
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 388
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InbreedingCoeff
type: SiteQuality
SIO_000300: 2.88e-2

MQRankSum
type: SiteQuality
SIO_000300: -3.0e-1

DP
type: SiteQuality
SIO_000300: 7.99932e5

BaseQRankSum
type: SiteQuality
SIO_000300: 4.08e-1

FS
type: SiteQuality
SIO_000300: 2.824e0

QD
type: SiteQuality
SIO_000300: 1.464e1

VQSLOD
type: SiteQuality
SIO_000300: 2.71e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.43e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.3e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3489
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 1.148798070019242e-4
allele num: 34819
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 0
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5227
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ReadPosRankSum
type: SiteQuality
SIO_000300: -4.37e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 7.7e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -3.05e0

VQSLOD
type: SiteQuality
SIO_000300: 1.93e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.200000000000001e-3

FS
type: SiteQuality
SIO_000300: 3.61e0

DP
type: SiteQuality
SIO_000300: 8.0827e5

ClippingRankSum
type: SiteQuality
SIO_000300: 1.15e-1

QD
type: SiteQuality
SIO_000300: 1.6e1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2656
num of homozygotes: 0

Other
type: Population
allele count: 0
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allele num: 397
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6799
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 34932
num of homozygotes: 0

East Asian
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allele count: 1
allele frequency: 1.91131498470948e-4
allele num: 5232
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South Asian
type: Population
allele count: 0
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ClippingRankSum
type: SiteQuality
SIO_000300: -1.466e0

FS
type: SiteQuality
SIO_000300: 3.522e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.29e0

MQRankSum
type: SiteQuality
SIO_000300: -1.022e0

QD
type: SiteQuality
SIO_000300: 1.532e1

VQSLOD
type: SiteQuality
SIO_000300: 1.75e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.6e-3

DP
type: SiteQuality
SIO_000300: 8.19184e5

BaseQRankSum
type: SiteQuality
SIO_000300: -9.330000000000001e-1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 401
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5268
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 6828
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 35011
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Latino
type: Population
allele count: 0
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num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 3.148e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.1e-3

VQSLOD
type: SiteQuality
SIO_000300: -1.05e0

DP
type: SiteQuality
SIO_000300: 8.26509e5

MQ
type: SiteQuality
SIO_000300: 5.805e1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2680
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7405
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5277
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3544
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 398
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 35013
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 8.29618e5

QD
type: SiteQuality
SIO_000300: 2.367e1

VQSLOD
type: SiteQuality
SIO_000300: 1.17e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.8e-3

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6835
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 397
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2697
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3556
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 1.136073163111704e-4
allele num: 35209
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5269
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BaseQRankSum
type: SiteQuality
SIO_000300: -1.367e0

VQSLOD
type: SiteQuality
SIO_000300: -1.359e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.12e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.19e-1

QD
type: SiteQuality
SIO_000300: 2.038e1

DP
type: SiteQuality
SIO_000300: 8.47609e5

FS
type: SiteQuality
SIO_000300: 4.881e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.63e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.78e-1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2697
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 35209
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 397
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5269
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3556
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7433
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 2.038e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 8.47609e5

BaseQRankSum
type: SiteQuality
SIO_000300: -1.367e0

FS
type: SiteQuality
SIO_000300: 4.881e0

MQRankSum
type: SiteQuality
SIO_000300: 6.78e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.12e-2

VQSLOD
type: SiteQuality
SIO_000300: -1.359e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.19e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.63e-1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5313
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6861
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2723
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 398
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 35421
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7474
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.5e-3

MQRankSum
type: SiteQuality
SIO_000300: 7.42e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.42e-1

QD
type: SiteQuality
SIO_000300: 1.244e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.42e-1

DP
type: SiteQuality
SIO_000300: 8.5493e5

BaseQRankSum
type: SiteQuality
SIO_000300: -7.42e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.86e-1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 398
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2723
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.823183986900426e-5
allele num: 35421
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7474
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5313
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6861
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.244e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 7.42e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 2.86e-1

DP
type: SiteQuality
SIO_000300: 8.5493e5

BaseQRankSum
type: SiteQuality
SIO_000300: -7.42e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.42e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.5e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.42e-1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2729
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5307
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South Asian
type: Population
allele count: 2
allele frequency: 5.527915975677169e-4
allele num: 3618
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6859
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7468
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Other
type: Population
allele count: 0
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allele num: 396
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MQRankSum
type: SiteQuality
SIO_000300: -6.45e-1

DP
type: SiteQuality
SIO_000300: 8.6044e5

ClippingRankSum
type: SiteQuality
SIO_000300: 4.61e-1

FS
type: SiteQuality
SIO_000300: 6.113e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.9e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.21e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.227e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.233e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.702e1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5315
num of homozygotes: 0

African
type: Population
allele count: 7
allele frequency: 1.019962115692846e-3
allele num: 6863
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3617
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.334757074212493e-4
allele num: 7492
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2717
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 5.637614161686774e-5
allele num: 35476
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -5.2e-2

FS
type: SiteQuality
SIO_000300: 2.115e0

DP
type: SiteQuality
SIO_000300: 8.66522e5

VQSLOD
type: SiteQuality
SIO_000300: 1.86e0

QD
type: SiteQuality
SIO_000300: 1.617e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.9e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.7e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.858e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.199999999999999e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 404
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7528
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African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6887
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European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 35654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2756
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3664
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FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.02e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.8e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -1.735e0

VQSLOD
type: SiteQuality
SIO_000300: -2.312e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.06e-1

QD
type: SiteQuality
SIO_000300: 2.457e1

MQRankSum
type: SiteQuality
SIO_000300: -9.19e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 8.8103e5

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.773386582355714e-5
allele num: 36057
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3766
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5411
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 406
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.316309069369488e-4
allele num: 7597
num of homozygotes: 0

African
type: Population
allele count: 18
allele frequency: 2.591419522027066e-3
allele num: 6946
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ClippingRankSum
type: SiteQuality
SIO_000300: -7.18e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.412e0

VQSLOD
type: SiteQuality
SIO_000300: 1.34e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.37e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.95e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 9.10248e5

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.23e-2

QD
type: SiteQuality
SIO_000300: 1.769e1

FS
type: SiteQuality
SIO_000300: 1.014e0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6989
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2815
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 409
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7635
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.754213947339429e-5
allele num: 36308
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3812
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InbreedingCoeff
type: SiteQuality
SIO_000300: -5.7e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.452e0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -3.136e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.065e0

MQRankSum
type: SiteQuality
SIO_000300: 7.47e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.29e0

DP
type: SiteQuality
SIO_000300: 9.28663e5

QD
type: SiteQuality
SIO_000300: 1.212e1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 411
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 36652
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2831
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7722
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.818512456810329e-4
allele num: 5499
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African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7027
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MQRankSum
type: SiteQuality
SIO_000300: 2.42e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.77e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.5e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -7.26e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.606e0

QD
type: SiteQuality
SIO_000300: 8.050000000000001e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.139999999999999e-1

DP
type: SiteQuality
SIO_000300: 9.50459e5

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.687594065792303e-5
allele num: 37208
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4008
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2890
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5574
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Latino
type: Population
allele count: 0
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num of homozygotes: 0

African
type: Population
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QD
type: SiteQuality
SIO_000300: 1.942e1

VQSLOD
type: SiteQuality
SIO_000300: -1.023e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.3e-3

MQRankSum
type: SiteQuality
SIO_000300: 1.01e0

FS
type: SiteQuality
SIO_000300: 3.114e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.25e0

DP
type: SiteQuality
SIO_000300: 9.74814e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.36e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.307e0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2920
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 423
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5618
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 37538
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.796420581655481e-4
allele num: 7152
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4099
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QD
type: SiteQuality
SIO_000300: 1.975e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.99e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.41e-1

FS
type: SiteQuality
SIO_000300: 3.923e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.71e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.7e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -5.828e-1

DP
type: SiteQuality
SIO_000300: 9.88883e5

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5651
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4151
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 19
allele frequency: 5.035380171202926e-4
allele num: 37733
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7923
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 423
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.36e-2

FS
type: SiteQuality
SIO_000300: 1.546e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.74e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.13e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.07e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.28e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.33e0

DP
type: SiteQuality
SIO_000300: 9.98812e5

QD
type: SiteQuality
SIO_000300: 1.489e1

MQ
type: SiteQuality
SIO_000300: 6.04e1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7296
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 433
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8058
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3033
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.738223535546671e-4
allele num: 5753
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4332
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ClippingRankSum
type: SiteQuality
SIO_000300: 9.49e-1

FS
type: SiteQuality
SIO_000300: 4.121e0

DP
type: SiteQuality
SIO_000300: 1.028594e6

VQSLOD
type: SiteQuality
SIO_000300: -5.09e-1

MQRankSum
type: SiteQuality
SIO_000300: 9.14e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.468e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.5e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.294e0

QD
type: SiteQuality
SIO_000300: 9.220000000000001e0

East Asian
type: Population
allele count: 18
allele frequency: 3.01659125188537e-3
allele num: 5967
num of homozygotes: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3224
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Other
type: Population
allele count: 1
allele frequency: 2.150537634408602e-3
allele num: 465
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European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 40186
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7502
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 2.07641196013289e-4
allele num: 4816
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.977e0

FS
type: SiteQuality
SIO_000300: 6.25e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.52e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.1e-2

QD
type: SiteQuality
SIO_000300: 1.459e1

VQSLOD
type: SiteQuality
SIO_000300: 3.51e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.2e-1

DP
type: SiteQuality
SIO_000300: 1.091489e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.04e-2

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8381
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4916
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 471
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3256
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7544
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 40553
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 8.62e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.870000000000001e-1

QD
type: SiteQuality
SIO_000300: 1.22e1

DP
type: SiteQuality
SIO_000300: 1.106956e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.03e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.659e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.63e-1

FS
type: SiteQuality
SIO_000300: 1.765e0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 40553
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3256
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 471
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7544
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8381
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4916
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.03e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 8.62e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.659e0

QD
type: SiteQuality
SIO_000300: 1.22e1

FS
type: SiteQuality
SIO_000300: 1.765e0

VQSLOD
type: SiteQuality
SIO_000300: 6.870000000000001e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.63e-1

DP
type: SiteQuality
SIO_000300: 1.106956e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

East Asian
type: Population
allele count: 8
allele frequency: 1.323407775020678e-3
allele num: 6045
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3308
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 473
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8419
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 40892
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5067
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.118436e6

FS
type: SiteQuality
SIO_000300: 1.081e0

MQRankSum
type: SiteQuality
SIO_000300: 2.0e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.6e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 2.17e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.8e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.34e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.03e-2

QD
type: SiteQuality
SIO_000300: 1.632e1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7662
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 484
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5337
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.63025758069775e-4
allele num: 6134
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3381
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 41622
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -8.107e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.2e-3

QD
type: SiteQuality
SIO_000300: 2.883e1

MQ
type: SiteQuality
SIO_000300: 5.797e1

DP
type: SiteQuality
SIO_000300: 1.141995e6

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6332
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3596
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 43432
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7856
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8783
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.567398119122257e-4
allele num: 6380
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.205739e6

VQSLOD
type: SiteQuality
SIO_000300: 1.31e0

QD
type: SiteQuality
SIO_000300: 2.53e1

South Asian
type: Population
allele count: 4
allele frequency: 6.21793875330328e-4
allele num: 6433
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 511
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8787
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3604
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6336
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7865
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.958e0

VQSLOD
type: SiteQuality
SIO_000300: -2.484e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.2e0

BaseQRankSum
type: SiteQuality
SIO_000300: 8.36e-1

MQRankSum
type: SiteQuality
SIO_000300: 9.56e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.96e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.26e-2

QD
type: SiteQuality
SIO_000300: 2.1e1

DP
type: SiteQuality
SIO_000300: 1.208165e6

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8901
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7973
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6395
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 543
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7716
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.243057736306133e-5
allele num: 44582
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.4e-3

VQSLOD
type: SiteQuality
SIO_000300: -3.188e0

MQRankSum
type: SiteQuality
SIO_000300: -1.046e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.69e-1

MQ
type: SiteQuality
SIO_000300: 5.968e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.29e0

DP
type: SiteQuality
SIO_000300: 1.247427e6

QD
type: SiteQuality
SIO_000300: 3.74e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.552e0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6390
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8898
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3721
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 546
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.245122471430816e-5
allele num: 44541
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7773
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.327e0

QD
type: SiteQuality
SIO_000300: 8.390000000000001e0

MQRankSum
type: SiteQuality
SIO_000300: 2.6e-2

DP
type: SiteQuality
SIO_000300: 1.247818e6

VQSLOD
type: SiteQuality
SIO_000300: 5.83e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.852e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.999999999999999e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 9.0e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.83e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7976
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7773
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3721
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.564945226917058e-4
allele num: 6390
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 44541
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 546
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BaseQRankSum
type: SiteQuality
SIO_000300: -1.852e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.83e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 2.6e-2

QD
type: SiteQuality
SIO_000300: 8.390000000000001e0

DP
type: SiteQuality
SIO_000300: 1.247818e6

VQSLOD
type: SiteQuality
SIO_000300: 5.83e-1

FS
type: SiteQuality
SIO_000300: 1.327e0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.0e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.999999999999999e-3

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 6.737485121387023e-5
allele num: 44527
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7977
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 546
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3703
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7914
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.9e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.42e-2

FS
type: SiteQuality
SIO_000300: 2.897e0

VQSLOD
type: SiteQuality
SIO_000300: -8.653999999999999e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.78e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.86e1

DP
type: SiteQuality
SIO_000300: 1.244496e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.63e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.71e-1

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 44623
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8910
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 551
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3713
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6395
num of homozygotes: 0

African
type: Population
allele count: 5
allele frequency: 6.263309532757109e-4
allele num: 7983
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.248074e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.01e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.05e-1

MQ
type: SiteQuality
SIO_000300: 5.956e1

MQRankSum
type: SiteQuality
SIO_000300: 1.02e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.16e-2

QD
type: SiteQuality
SIO_000300: 1.381e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.66e-1

FS
type: SiteQuality
SIO_000300: 4.115e0

VQSLOD
type: SiteQuality
SIO_000300: 1.61e0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.239390885679095e-5
allele num: 44655
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6389
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8913
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3714
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7985
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8107
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.07e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.58e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.4e-3

FS
type: SiteQuality
SIO_000300: 8.89e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.92e-1

DP
type: SiteQuality
SIO_000300: 1.248953e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.49e-1

QD
type: SiteQuality
SIO_000300: 1.31e1

MQRankSum
type: SiteQuality
SIO_000300: -2.71e-1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8911
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8160
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3717
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 554
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6391
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.239641657334827e-5
allele num: 44650
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 6.81e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.07e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.016e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.5e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -1.639e0

FS
type: SiteQuality
SIO_000300: 1.394e0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.69e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.93e-1

DP
type: SiteQuality
SIO_000300: 1.250973e6

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6388
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 550
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8904
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3696
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7971
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -3.172e-1

DP
type: SiteQuality
SIO_000300: 1.242521e6

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.9e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.3e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.7e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.9e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.82e-1

QD
type: SiteQuality
SIO_000300: 1.32e1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6357
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8873
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3662
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8869
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.242303293943539e-5
allele num: 44597
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 559
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.38e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.14e-1

VQSLOD
type: SiteQuality
SIO_000300: -5.44e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.775e0

FS
type: SiteQuality
SIO_000300: 5.821e0

DP
type: SiteQuality
SIO_000300: 1.218713e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

QD
type: SiteQuality
SIO_000300: 7.04e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.13e0

South Asian
type: Population
allele count: 2
allele frequency: 2.246686137946529e-4
allele num: 8902
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.258178158027177e-4
allele num: 7948
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6360
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 3.381043615462639e-4
allele num: 8873
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3647
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 557
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.671e1

MQRankSum
type: SiteQuality
SIO_000300: -1.93e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.46e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.920000000000001e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -1.52e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -9.93e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.07e-1

FS
type: SiteQuality
SIO_000300: 5.15e-1

MQ
type: SiteQuality
SIO_000300: 5.977e1

DP
type: SiteQuality
SIO_000300: 1.217052e6

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7935
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8865
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 15
allele frequency: 3.370786516853932e-4
allele num: 44500
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3633
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6339
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.02e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.33e-2

FS
type: SiteQuality
SIO_000300: 1.3e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.47e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.69e0

DP
type: SiteQuality
SIO_000300: 1.217883e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.44e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.06e-1

QD
type: SiteQuality
SIO_000300: 2.167e1

East Asian
type: Population
allele count: 2
allele frequency: 3.154574132492114e-4
allele num: 6340
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7945
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8879
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3636
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8931
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 554
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VQSLOD
type: SiteQuality
SIO_000300: 1.41e-1

QD
type: SiteQuality
SIO_000300: 2.465e1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.16e-1

FS
type: SiteQuality
SIO_000300: 1.412e0

MQRankSum
type: SiteQuality
SIO_000300: 1.39e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.214531e6

ClippingRankSum
type: SiteQuality
SIO_000300: 2.21e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.6e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.9e-1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6333
num of homozygotes: 0

South Asian
type: Population
allele count: 31
allele frequency: 3.471055872802598e-3
allele num: 8931
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 13
allele frequency: 2.923910843210904e-4
allele num: 44461
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7937
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.127777151234916e-4
allele num: 8867
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3619
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 5.2e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.539e-1

DP
type: SiteQuality
SIO_000300: 1.215254e6

MQ
type: SiteQuality
SIO_000300: 5.971e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.58e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.52e0

MQRankSum
type: SiteQuality
SIO_000300: 6.6e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.17e-1

FS
type: SiteQuality
SIO_000300: 1.107e0

QD
type: SiteQuality
SIO_000300: 2.213e1

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 6.740815638692282e-5
allele num: 44505
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6336
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.12739571589628e-4
allele num: 8870
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8936
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7935
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 554
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.61e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.083e0

DP
type: SiteQuality
SIO_000300: 1.213585e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.5e-3

MQRankSum
type: SiteQuality
SIO_000300: 1.45e-1

FS
type: SiteQuality
SIO_000300: 4.33e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.889999999999999e-1

QD
type: SiteQuality
SIO_000300: 1.189e1

VQSLOD
type: SiteQuality
SIO_000300: 3.0e0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 554
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8923
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3615
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7917
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.253064167267484e-5
allele num: 44384
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6321
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.715e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.3e-3

QD
type: SiteQuality
SIO_000300: 1.17e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.185e0

DP
type: SiteQuality
SIO_000300: 1.214674e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.55e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.47e-1

MQRankSum
type: SiteQuality
SIO_000300: -5.92e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.55e-1

South Asian
type: Population
allele count: 1
allele frequency: 1.119946242580356e-4
allele num: 8929
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6324
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7914
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 554
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3621
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 44456
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.59e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -9.47e-1

DP
type: SiteQuality
SIO_000300: 1.213617e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 7.054e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.8e-3

MQRankSum
type: SiteQuality
SIO_000300: 1.23e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.81e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.149e0

QD
type: SiteQuality
SIO_000300: 3.66e0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3617
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8930
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6333
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7913
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 552
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 4.498931503767855e-5
allele num: 44455
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.56e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.39e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.83e-2

DP
type: SiteQuality
SIO_000300: 1.212785e6

MQRankSum
type: SiteQuality
SIO_000300: -1.542e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.93e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 2.572e1

VQSLOD
type: SiteQuality
SIO_000300: -2.384e0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 553
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.12739571589628e-4
allele num: 8870
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.579279848389134e-4
allele num: 6332
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3606
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 4.501462975467027e-5
allele num: 44430
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7912
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.252e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.4e-3

DP
type: SiteQuality
SIO_000300: 1.213426e6

FS
type: SiteQuality
SIO_000300: 9.03e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.977e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 1.56e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.9e-2

MQRankSum
type: SiteQuality
SIO_000300: -4.17e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.5e-1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6330
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7891
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 553
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8844
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 44325
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3570
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.226539e6

VQSLOD
type: SiteQuality
SIO_000300: -7.62e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.4e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 3.052e1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 549
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 44371
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3586
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8943
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8858
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 3.801317790167258e-4
allele num: 7892
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.166e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.51e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.11e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.1e-3

MQRankSum
type: SiteQuality
SIO_000300: 5.0e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 5.56e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.91e0

FS
type: SiteQuality
SIO_000300: 3.627e0

DP
type: SiteQuality
SIO_000300: 1.226825e6

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.248605864364094e-5
allele num: 44472
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 552
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8984
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6335
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8878
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3591
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.958e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.83e-1

MQRankSum
type: SiteQuality
SIO_000300: -8.3e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.599999999999999e-3

VQSLOD
type: SiteQuality
SIO_000300: -1.489e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.42e0

QD
type: SiteQuality
SIO_000300: 2.044e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.12e0

DP
type: SiteQuality
SIO_000300: 1.236717e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6336
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8992
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3597
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 551
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8881
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.267427122940431e-4
allele num: 7890
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.706e0

MQRankSum
type: SiteQuality
SIO_000300: -1.67e0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.54e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.98e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 2.33e0

DP
type: SiteQuality
SIO_000300: 1.237964e6

QD
type: SiteQuality
SIO_000300: 7.85e0

VQSLOD
type: SiteQuality
SIO_000300: -1.253e0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 549
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8889
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6335
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7878
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9005
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3598
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.241838e6

QD
type: SiteQuality
SIO_000300: 2.139e1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.51e-1

MQRankSum
type: SiteQuality
SIO_000300: -7.18e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.9e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.89e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -2.553e0

BaseQRankSum
type: SiteQuality
SIO_000300: 7.51e-1

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 44389
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9012
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 546
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7862
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3585
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.125365743866757e-4
allele num: 8886
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.922e1

VQSLOD
type: SiteQuality
SIO_000300: -2.238e0

QD
type: SiteQuality
SIO_000300: 2.352e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.36e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.36e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

FS
type: SiteQuality
SIO_000300: 2.593e0

DP
type: SiteQuality
SIO_000300: 1.237193e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.75e-1