20-31381424-CTG-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31381424
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 31381422
    reference: chr 20
allele count: 1
allele frequency: 8.274309922552459e-6
allele num: 120856
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000412305
  ensembl transcript: ENST00000456297
  gene symbol: DNMT3B
  hgvsc: ENST00000456297.2:c.838+851_838+852delTG
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000345105
  ensembl transcript: ENST00000344505
  gene symbol: DNMT3B
  hgvsc: ENST00000344505.4:c.1066+851_1066+852delTG
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000313397
  ensembl transcript: ENST00000353855
  gene symbol: DNMT3B
  hgvsc: ENST00000353855.2:c.1066+851_1066+852delTG
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000364774
  ensembl transcript: ENST00000375623
  gene symbol: DNMT3B
  hgvsc: ENST00000375623.4:c.796-1788_796-1787delTG
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000201963
  ensembl transcript: ENST00000201963
  gene symbol: DNMT3B
  hgvsc: ENST00000201963.3:c.1102+851_1102+852delTG
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000328547
  ensembl transcript: ENST00000328111
  gene symbol: DNMT3B
  hgvsc: ENST00000328111.2:c.1126+26_1126+27delTG
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000403169
  ensembl transcript: ENST00000443239
  gene symbol: DNMT3B
  hgvsc: ENST00000443239.3:c.940+851_940+852delTG
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000337764
  ensembl transcript: ENST00000348286
  gene symbol: DNMT3B
  hgvsc: ENST00000348286.2:c.1066+851_1066+852delTG
  variant of: http://identifiers.org/hgnc/2979
canonical: true
consequence: intron
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 985
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1396
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 647
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9007
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 718
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1886
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 669
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1350
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 884
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3616
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 813
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12828
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1875
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18000
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 670
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3724
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 702
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 679
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2053
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3058
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 794
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 240
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 290
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 621
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 202
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: Other
population: South Asian
population: European (Non-Finnish)
population: African
population: East Asian
reference allele: CTG
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP

20-31381443-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31381443
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 31381443
    reference: chr 20
allele count: 1
allele frequency: 8.308960382876895e-6
allele num: 120352
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000201963
  ensembl transcript: ENST00000201963
  gene symbol: DNMT3B
  hgvsc: ENST00000201963.3:c.1102+867C>T
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000403169
  ensembl transcript: ENST00000443239
  gene symbol: DNMT3B
  hgvsc: ENST00000443239.3:c.940+867C>T
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000337764
  ensembl transcript: ENST00000348286
  gene symbol: DNMT3B
  hgvsc: ENST00000348286.2:c.1066+867C>T
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000345105
  ensembl transcript: ENST00000344505
  gene symbol: DNMT3B
  hgvsc: ENST00000344505.4:c.1066+867C>T
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000412305
  ensembl transcript: ENST00000456297
  gene symbol: DNMT3B
  hgvsc: ENST00000456297.2:c.838+867C>T
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000364774
  ensembl transcript: ENST00000375623
  gene symbol: DNMT3B
  hgvsc: ENST00000375623.4:c.796-1772C>T
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000328547
  ensembl transcript: ENST00000328111
  gene symbol: DNMT3B
  hgvsc: ENST00000328111.2:c.1126+42C>T
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000313397
  ensembl transcript: ENST00000353855
  gene symbol: DNMT3B
  hgvsc: ENST00000353855.2:c.1066+867C>T
  variant of: http://identifiers.org/hgnc/2979
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 679
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1876
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3724
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 702
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8029
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 883
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 647
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13936
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8167
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3538
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 718
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9687
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 670
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3208
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 985
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1349
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 669
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 813
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6835
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 283
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1416
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1628
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2017
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2382
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: European (Finnish)
population: Latino
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum

20-31381450-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31381450
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 31381450
    reference: chr 20
allele count: 2
allele frequency: 1.669504824868944e-5
allele num: 119796
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000337764
  ensembl transcript: ENST00000348286
  gene symbol: DNMT3B
  hgvsc: ENST00000348286.2:c.1066+874T>G
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000403169
  ensembl transcript: ENST00000443239
  gene symbol: DNMT3B
  hgvsc: ENST00000443239.3:c.940+874T>G
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000201963
  ensembl transcript: ENST00000201963
  gene symbol: DNMT3B
  hgvsc: ENST00000201963.3:c.1102+874T>G
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000313397
  ensembl transcript: ENST00000353855
  gene symbol: DNMT3B
  hgvsc: ENST00000353855.2:c.1066+874T>G
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000412305
  ensembl transcript: ENST00000456297
  gene symbol: DNMT3B
  hgvsc: ENST00000456297.2:c.838+874T>G
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000345105
  ensembl transcript: ENST00000344505
  gene symbol: DNMT3B
  hgvsc: ENST00000344505.4:c.1066+874T>G
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000364774
  ensembl transcript: ENST00000375623
  gene symbol: DNMT3B
  hgvsc: ENST00000375623.4:c.796-1765T>G
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000328547
  ensembl transcript: ENST00000328111
  gene symbol: DNMT3B
  hgvsc: ENST00000328111.2:c.1126+49T>G
  variant of: http://identifiers.org/hgnc/2979
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11821
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13258
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1347
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 679
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 984
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3203
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3368
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8041
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3724
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 718
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 883
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 669
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1856
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 647
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 813
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 670
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 702
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6717
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4948
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 776
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1443
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4060
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10576
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 125
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4023
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: Other
population: European (Finnish)
population: South Asian
population: Latino
population: European (Non-Finnish)
reference allele: T
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ

20-31381451-TC-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31381451
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 31381450
    reference: chr 20
allele count: 1
allele frequency: 8.345434212942099e-6
allele num: 119826
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000337764
  ensembl transcript: ENST00000348286
  gene symbol: DNMT3B
  hgvsc: ENST00000348286.2:c.1066+876delC
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000412305
  ensembl transcript: ENST00000456297
  gene symbol: DNMT3B
  hgvsc: ENST00000456297.2:c.838+876delC
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000201963
  ensembl transcript: ENST00000201963
  gene symbol: DNMT3B
  hgvsc: ENST00000201963.3:c.1102+876delC
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000313397
  ensembl transcript: ENST00000353855
  gene symbol: DNMT3B
  hgvsc: ENST00000353855.2:c.1066+876delC
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000345105
  ensembl transcript: ENST00000344505
  gene symbol: DNMT3B
  hgvsc: ENST00000344505.4:c.1066+876delC
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000364774
  ensembl transcript: ENST00000375623
  gene symbol: DNMT3B
  hgvsc: ENST00000375623.4:c.796-1763delC
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000328547
  ensembl transcript: ENST00000328111
  gene symbol: DNMT3B
  hgvsc: ENST00000328111.2:c.1126+51delC
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000403169
  ensembl transcript: ENST00000443239
  gene symbol: DNMT3B
  hgvsc: ENST00000443239.3:c.940+876delC
  variant of: http://identifiers.org/hgnc/2979
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 647
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 883
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 702
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1349
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 670
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8033
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1855
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 679
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13263
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3207
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11850
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3364
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6690
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3724
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 984
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 718
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 813
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 669
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4886
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 777
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1181
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3856
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4061
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 257
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: South Asian
population: East Asian
population: European (Finnish)
population: Other
population: African
reference allele: TC
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum

20-31381452-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31381452
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 31381452
    reference: chr 20
allele count: 1
allele frequency: 8.353381448810478e-6
allele num: 119712
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000364774
  ensembl transcript: ENST00000375623
  gene symbol: DNMT3B
  hgvsc: ENST00000375623.4:c.796-1763C>T
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000313397
  ensembl transcript: ENST00000353855
  gene symbol: DNMT3B
  hgvsc: ENST00000353855.2:c.1066+876C>T
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000412305
  ensembl transcript: ENST00000456297
  gene symbol: DNMT3B
  hgvsc: ENST00000456297.2:c.838+876C>T
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000403169
  ensembl transcript: ENST00000443239
  gene symbol: DNMT3B
  hgvsc: ENST00000443239.3:c.940+876C>T
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000337764
  ensembl transcript: ENST00000348286
  gene symbol: DNMT3B
  hgvsc: ENST00000348286.2:c.1066+876C>T
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000328547
  ensembl transcript: ENST00000328111
  gene symbol: DNMT3B
  hgvsc: ENST00000328111.2:c.1126+51C>T
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000201963
  ensembl transcript: ENST00000201963
  gene symbol: DNMT3B
  hgvsc: ENST00000201963.3:c.1102+876C>T
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000345105
  ensembl transcript: ENST00000344505
  gene symbol: DNMT3B
  hgvsc: ENST00000344505.4:c.1066+876C>T
  variant of: http://identifiers.org/hgnc/2979
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 984
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8029
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 679
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13236
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 718
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11883
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 813
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3208
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 561
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3363
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1855
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3724
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 647
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 702
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6689
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 670
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1348
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 883
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 669
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3679
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 137
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2643
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4854
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1861
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3121
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13410
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Latino
population: South Asian
population: Other
reference allele: C
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff

20-31383165-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31383165
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 31383165
    reference: chr 20
allele count: 2
allele frequency: 1.658017342861406e-5
allele num: 120626
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000201963
  ensembl transcript: ENST00000201963
  gene symbol: DNMT3B
  hgvsc: ENST00000201963.3:c.1103-50C>T
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000313397
  ensembl transcript: ENST00000353855
  gene symbol: DNMT3B
  hgvsc: ENST00000353855.2:c.1067-50C>T
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000364774
  ensembl transcript: ENST00000375623
  gene symbol: DNMT3B
  hgvsc: ENST00000375623.4:c.796-50C>T
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000345105
  ensembl transcript: ENST00000344505
  gene symbol: DNMT3B
  hgvsc: ENST00000344505.4:c.1067-50C>T
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000412305
  ensembl transcript: ENST00000456297
  gene symbol: DNMT3B
  hgvsc: ENST00000456297.2:c.839-50C>T
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000328547
  ensembl transcript: ENST00000328111
  gene symbol: DNMT3B
  hgvsc: ENST00000328111.2:c.1127-50C>T
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000403169
  ensembl transcript: ENST00000443239
  gene symbol: DNMT3B
  hgvsc: ENST00000443239.3:c.941-50C>T
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000337764
  ensembl transcript: ENST00000348286
  gene symbol: DNMT3B
  hgvsc: ENST00000348286.2:c.1067-50C>T
  variant of: http://identifiers.org/hgnc/2979
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6297
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5660
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6657
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3099
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5903
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3137
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1864
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1219
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4728
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2343
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1512
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4750
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3727
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6858
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1662
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1180
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1939
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: South Asian
population: African
population: East Asian
population: European (Finnish)
population: Latino
reference allele: C
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum

20-31383166-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31383166
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 31383166
    reference: chr 20
allele count: 1
allele frequency: 8.290499088045101e-6
allele num: 120620
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000337764
  ensembl transcript: ENST00000348286
  gene symbol: DNMT3B
  hgvsc: ENST00000348286.2:c.1067-49T>C
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000328547
  ensembl transcript: ENST00000328111
  gene symbol: DNMT3B
  hgvsc: ENST00000328111.2:c.1127-49T>C
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000412305
  ensembl transcript: ENST00000456297
  gene symbol: DNMT3B
  hgvsc: ENST00000456297.2:c.839-49T>C
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000201963
  ensembl transcript: ENST00000201963
  gene symbol: DNMT3B
  hgvsc: ENST00000201963.3:c.1103-49T>C
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000313397
  ensembl transcript: ENST00000353855
  gene symbol: DNMT3B
  hgvsc: ENST00000353855.2:c.1067-49T>C
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000364774
  ensembl transcript: ENST00000375623
  gene symbol: DNMT3B
  hgvsc: ENST00000375623.4:c.796-49T>C
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000345105
  ensembl transcript: ENST00000344505
  gene symbol: DNMT3B
  hgvsc: ENST00000344505.4:c.1067-49T>C
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000403169
  ensembl transcript: ENST00000443239
  gene symbol: DNMT3B
  hgvsc: ENST00000443239.3:c.941-49T>C
  variant of: http://identifiers.org/hgnc/2979
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5903
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1864
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4728
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3139
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6657
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6297
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 333
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1662
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1512
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4748
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5660
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1219
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2343
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3727
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6857
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3099
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 226
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1398
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 124
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1179
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: South Asian
population: African
population: Latino
population: East Asian
reference allele: T
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: FS

20-31383174-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31383174
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 31383174
    reference: chr 20
allele count: 1
allele frequency: 8.288849839196314e-6
allele num: 120644
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000364774
  ensembl transcript: ENST00000375623
  gene symbol: DNMT3B
  hgvsc: ENST00000375623.4:c.796-41C>T
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000328547
  ensembl transcript: ENST00000328111
  gene symbol: DNMT3B
  hgvsc: ENST00000328111.2:c.1127-41C>T
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000337764
  ensembl transcript: ENST00000348286
  gene symbol: DNMT3B
  hgvsc: ENST00000348286.2:c.1067-41C>T
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000201963
  ensembl transcript: ENST00000201963
  gene symbol: DNMT3B
  hgvsc: ENST00000201963.3:c.1103-41C>T
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000412305
  ensembl transcript: ENST00000456297
  gene symbol: DNMT3B
  hgvsc: ENST00000456297.2:c.839-41C>T
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000313397
  ensembl transcript: ENST00000353855
  gene symbol: DNMT3B
  hgvsc: ENST00000353855.2:c.1067-41C>T
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000403169
  ensembl transcript: ENST00000443239
  gene symbol: DNMT3B
  hgvsc: ENST00000443239.3:c.941-41C>T
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000345105
  ensembl transcript: ENST00000344505
  gene symbol: DNMT3B
  hgvsc: ENST00000344505.4:c.1067-41C>T
  variant of: http://identifiers.org/hgnc/2979
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6857
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3140
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1685
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6658
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3099
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3727
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2343
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1512
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4739
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5902
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6296
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4728
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1219
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5660
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1864
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2305
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1550
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 125
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD

20-31383178-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31383178
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 31383178
    reference: chr 20
allele count: 33
allele frequency: 2.735275102365598e-4
allele num: 120646
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000345105
  ensembl transcript: ENST00000344505
  gene symbol: DNMT3B
  hgvsc: ENST00000344505.4:c.1067-37T>C
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000313397
  ensembl transcript: ENST00000353855
  gene symbol: DNMT3B
  hgvsc: ENST00000353855.2:c.1067-37T>C
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000364774
  ensembl transcript: ENST00000375623
  gene symbol: DNMT3B
  hgvsc: ENST00000375623.4:c.796-37T>C
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000403169
  ensembl transcript: ENST00000443239
  gene symbol: DNMT3B
  hgvsc: ENST00000443239.3:c.941-37T>C
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000337764
  ensembl transcript: ENST00000348286
  gene symbol: DNMT3B
  hgvsc: ENST00000348286.2:c.1067-37T>C
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000328547
  ensembl transcript: ENST00000328111
  gene symbol: DNMT3B
  hgvsc: ENST00000328111.2:c.1127-37T>C
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000412305
  ensembl transcript: ENST00000456297
  gene symbol: DNMT3B
  hgvsc: ENST00000456297.2:c.839-37T>C
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000201963
  ensembl transcript: ENST00000201963
  gene symbol: DNMT3B
  hgvsc: ENST00000201963.3:c.1103-37T>C
  variant of: http://identifiers.org/hgnc/2979
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3726
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1695
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1221
  bin: 9.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 5900
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1508
  bin: 8.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2344
  bin: 7.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1863
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6658
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 464
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4738
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6856
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4731
  bin: 6.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3096
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6296
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3144
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5666
  bin: 9.75e1
  variant carriers: 14
genotype quality: GenotypeQuality
  all individuals: 129
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1574
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1588
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1189
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Latino
population: South Asian
reference allele: T
site quality: MQ
site quality: QD
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum

20-31383186-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31383186
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 31383186
    reference: chr 20
allele count: 1
allele frequency: 8.287888080359362e-6
allele num: 120658
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000313397
  ensembl transcript: ENST00000353855
  gene symbol: DNMT3B
  hgvsc: ENST00000353855.2:c.1067-29C>T
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000337764
  ensembl transcript: ENST00000348286
  gene symbol: DNMT3B
  hgvsc: ENST00000348286.2:c.1067-29C>T
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000328547
  ensembl transcript: ENST00000328111
  gene symbol: DNMT3B
  hgvsc: ENST00000328111.2:c.1127-29C>T
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000403169
  ensembl transcript: ENST00000443239
  gene symbol: DNMT3B
  hgvsc: ENST00000443239.3:c.941-29C>T
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000345105
  ensembl transcript: ENST00000344505
  gene symbol: DNMT3B
  hgvsc: ENST00000344505.4:c.1067-29C>T
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000412305
  ensembl transcript: ENST00000456297
  gene symbol: DNMT3B
  hgvsc: ENST00000456297.2:c.839-29C>T
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000364774
  ensembl transcript: ENST00000375623
  gene symbol: DNMT3B
  hgvsc: ENST00000375623.4:c.796-29C>T
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000201963
  ensembl transcript: ENST00000201963
  gene symbol: DNMT3B
  hgvsc: ENST00000201963.3:c.1103-29C>T
  variant of: http://identifiers.org/hgnc/2979
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1217
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6295
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4745
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3731
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1710
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3152
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6857
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2344
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1860
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5654
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1508
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5904
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4734
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3096
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6660
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 502
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1655
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1193
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1420
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Latino
population: African
population: Other
population: European (Finnish)
population: East Asian
reference allele: C
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: MQ

20-31383187-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31383187
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 31383187
    reference: chr 20
allele count: 24
allele frequency: 1.988895334383028e-4
allele num: 120670
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000201963
  ensembl transcript: ENST00000201963
  gene symbol: DNMT3B
  hgvsc: ENST00000201963.3:c.1103-28A>G
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000345105
  ensembl transcript: ENST00000344505
  gene symbol: DNMT3B
  hgvsc: ENST00000344505.4:c.1067-28A>G
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000412305
  ensembl transcript: ENST00000456297
  gene symbol: DNMT3B
  hgvsc: ENST00000456297.2:c.839-28A>G
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000328547
  ensembl transcript: ENST00000328111
  gene symbol: DNMT3B
  hgvsc: ENST00000328111.2:c.1127-28A>G
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000337764
  ensembl transcript: ENST00000348286
  gene symbol: DNMT3B
  hgvsc: ENST00000348286.2:c.1067-28A>G
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000403169
  ensembl transcript: ENST00000443239
  gene symbol: DNMT3B
  hgvsc: ENST00000443239.3:c.941-28A>G
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000313397
  ensembl transcript: ENST00000353855
  gene symbol: DNMT3B
  hgvsc: ENST00000353855.2:c.1067-28A>G
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000364774
  ensembl transcript: ENST00000375623
  gene symbol: DNMT3B
  hgvsc: ENST00000375623.4:c.796-28A>G
  variant of: http://identifiers.org/hgnc/2979
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5900
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1509
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6295
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1860
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5658
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3730
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4736
  bin: 6.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 4743
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1710
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3093
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 514
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3153
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6857
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6660
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1217
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2346
  bin: 7.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1423
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2308
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1656
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: A
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: QD

20-31383189-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31383189
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 31383189
    reference: chr 20
allele count: 3
allele frequency: 2.486325211337643e-5
allele num: 120660
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000345105
  ensembl transcript: ENST00000344505
  gene symbol: DNMT3B
  hgvsc: ENST00000344505.4:c.1067-26G>A
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000403169
  ensembl transcript: ENST00000443239
  gene symbol: DNMT3B
  hgvsc: ENST00000443239.3:c.941-26G>A
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000313397
  ensembl transcript: ENST00000353855
  gene symbol: DNMT3B
  hgvsc: ENST00000353855.2:c.1067-26G>A
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000328547
  ensembl transcript: ENST00000328111
  gene symbol: DNMT3B
  hgvsc: ENST00000328111.2:c.1127-26G>A
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000201963
  ensembl transcript: ENST00000201963
  gene symbol: DNMT3B
  hgvsc: ENST00000201963.3:c.1103-26G>A
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000337764
  ensembl transcript: ENST00000348286
  gene symbol: DNMT3B
  hgvsc: ENST00000348286.2:c.1067-26G>A
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000364774
  ensembl transcript: ENST00000375623
  gene symbol: DNMT3B
  hgvsc: ENST00000375623.4:c.796-26G>A
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000412305
  ensembl transcript: ENST00000456297
  gene symbol: DNMT3B
  hgvsc: ENST00000456297.2:c.839-26G>A
  variant of: http://identifiers.org/hgnc/2979
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5903
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4749
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3155
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3093
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6294
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6662
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1216
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1507
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3730
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4733
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1859
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1715
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6859
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5657
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2341
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1420
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1589
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: Other
population: South Asian
population: Latino
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP

20-31383194-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31383194
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 31383194
    reference: chr 20
allele count: 1
allele frequency: 8.285141427364165e-6
allele num: 120698
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000364774
  ensembl transcript: ENST00000375623
  gene symbol: DNMT3B
  hgvsc: ENST00000375623.4:c.796-21C>T
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000345105
  ensembl transcript: ENST00000344505
  gene symbol: DNMT3B
  hgvsc: ENST00000344505.4:c.1067-21C>T
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000201963
  ensembl transcript: ENST00000201963
  gene symbol: DNMT3B
  hgvsc: ENST00000201963.3:c.1103-21C>T
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000328547
  ensembl transcript: ENST00000328111
  gene symbol: DNMT3B
  hgvsc: ENST00000328111.2:c.1127-21C>T
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000337764
  ensembl transcript: ENST00000348286
  gene symbol: DNMT3B
  hgvsc: ENST00000348286.2:c.1067-21C>T
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000403169
  ensembl transcript: ENST00000443239
  gene symbol: DNMT3B
  hgvsc: ENST00000443239.3:c.941-21C>T
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000412305
  ensembl transcript: ENST00000456297
  gene symbol: DNMT3B
  hgvsc: ENST00000456297.2:c.839-21C>T
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000313397
  ensembl transcript: ENST00000353855
  gene symbol: DNMT3B
  hgvsc: ENST00000353855.2:c.1067-21C>T
  variant of: http://identifiers.org/hgnc/2979
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1216
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3094
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 551
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1726
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3156
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5655
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5904
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6858
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4749
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6294
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4733
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1860
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6662
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2341
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3730
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1506
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1663
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1194
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: Latino
population: South Asian
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum

20-31383216-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31383216
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 31383216
    reference: chr 20
allele count: 1
allele frequency: 8.268289456277286e-6
allele num: 120944
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000328547
  ensembl transcript: ENST00000328111
  gene symbol: DNMT3B
  hgvsc: ENST00000328111.2:c.1128G>C
  hgvsp: ENSP00000328547.2:p.Glu376Asp
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000403169
  ensembl transcript: ENST00000443239
  gene symbol: DNMT3B
  hgvsc: ENST00000443239.3:c.942G>C
  hgvsp: ENSP00000403169.2:p.Glu314Asp
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000364774
  ensembl transcript: ENST00000375623
  gene symbol: DNMT3B
  hgvsc: ENST00000375623.4:c.797G>C
  hgvsp: ENSP00000364774.4:p.Arg266Thr
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000201963
  ensembl transcript: ENST00000201963
  gene symbol: DNMT3B
  hgvsc: ENST00000201963.3:c.1104G>C
  hgvsp: ENSP00000201963.3:p.Glu368Asp
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000313397
  ensembl transcript: ENST00000353855
  gene symbol: DNMT3B
  hgvsc: ENST00000353855.2:c.1068G>C
  hgvsp: ENSP00000313397.4:p.Glu356Asp
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000412305
  ensembl transcript: ENST00000456297
  gene symbol: DNMT3B
  hgvsc: ENST00000456297.2:c.840G>C
  hgvsp: ENSP00000412305.1:p.Glu280Asp
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000345105
  ensembl transcript: ENST00000344505
  gene symbol: DNMT3B
  hgvsc: ENST00000344505.4:c.1068G>C
  hgvsp: ENSP00000345105.4:p.Glu356Asp
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000337764
  ensembl transcript: ENST00000348286
  gene symbol: DNMT3B
  hgvsc: ENST00000348286.2:c.1068G>C
  hgvsp: ENSP00000337764.2:p.Glu356Asp
  variant of: http://identifiers.org/hgnc/2979
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1506
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3094
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6859
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3170
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1860
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2341
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1749
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 748
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5904
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4733
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3730
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6663
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4747
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6293
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1216
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5655
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1954
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Glu376Asp
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: African
population: South Asian
population: Latino
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD

20-31383226-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31383226
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 31383226
    reference: chr 20
allele count: 1
allele frequency: 8.259548037531387e-6
allele num: 121072
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000412305
  ensembl transcript: ENST00000456297
  gene symbol: DNMT3B
  hgvsc: ENST00000456297.2:c.850C>T
  hgvsp: ENSP00000412305.1:p.Arg284Ter
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000345105
  ensembl transcript: ENST00000344505
  gene symbol: DNMT3B
  hgvsc: ENST00000344505.4:c.1078C>T
  hgvsp: ENSP00000345105.4:p.Arg360Ter
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000337764
  ensembl transcript: ENST00000348286
  gene symbol: DNMT3B
  hgvsc: ENST00000348286.2:c.1078C>T
  hgvsp: ENSP00000337764.2:p.Arg360Ter
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000328547
  ensembl transcript: ENST00000328111
  gene symbol: DNMT3B
  hgvsc: ENST00000328111.2:c.1138C>T
  hgvsp: ENSP00000328547.2:p.Arg380Ter
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000364774
  ensembl transcript: ENST00000375623
  gene symbol: DNMT3B
  hgvsc: ENST00000375623.4:c.807C>T
  hgvsp: ENST00000375623.4:c.807C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000313397
  ensembl transcript: ENST00000353855
  gene symbol: DNMT3B
  hgvsc: ENST00000353855.2:c.1078C>T
  hgvsp: ENSP00000313397.4:p.Arg360Ter
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000201963
  ensembl transcript: ENST00000201963
  gene symbol: DNMT3B
  hgvsc: ENST00000201963.3:c.1114C>T
  hgvsp: ENSP00000201963.3:p.Arg372Ter
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000403169
  ensembl transcript: ENST00000443239
  gene symbol: DNMT3B
  hgvsc: ENST00000443239.3:c.952C>T
  hgvsp: ENSP00000403169.2:p.Arg318Ter
  variant of: http://identifiers.org/hgnc/2979
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 864
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4734
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6857
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6663
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4748
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3094
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1757
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2341
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3729
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6294
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1506
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5655
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3177
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5904
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1216
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1859
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48213
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1957
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1200
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2314
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1954
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Arg380Ter
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: South Asian
reference allele: C
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum

20-31383227-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31383227
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 31383227
    reference: chr 20
allele count: 5
allele frequency: 4.128682785044259e-5
allele num: 121104
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000313397
  ensembl transcript: ENST00000353855
  gene symbol: DNMT3B
  hgvsc: ENST00000353855.2:c.1079G>A
  hgvsp: ENSP00000313397.4:p.Arg360Gln
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000403169
  ensembl transcript: ENST00000443239
  gene symbol: DNMT3B
  hgvsc: ENST00000443239.3:c.953G>A
  hgvsp: ENSP00000403169.2:p.Arg318Gln
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000412305
  ensembl transcript: ENST00000456297
  gene symbol: DNMT3B
  hgvsc: ENST00000456297.2:c.851G>A
  hgvsp: ENSP00000412305.1:p.Arg284Gln
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000364774
  ensembl transcript: ENST00000375623
  gene symbol: DNMT3B
  hgvsc: ENST00000375623.4:c.808G>A
  hgvsp: ENSP00000364774.4:p.Glu270Lys
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000345105
  ensembl transcript: ENST00000344505
  gene symbol: DNMT3B
  hgvsc: ENST00000344505.4:c.1079G>A
  hgvsp: ENSP00000345105.4:p.Arg360Gln
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000328547
  ensembl transcript: ENST00000328111
  gene symbol: DNMT3B
  hgvsc: ENST00000328111.2:c.1139G>A
  hgvsp: ENSP00000328547.2:p.Arg380Gln
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000337764
  ensembl transcript: ENST00000348286
  gene symbol: DNMT3B
  hgvsc: ENST00000348286.2:c.1079G>A
  hgvsp: ENSP00000337764.2:p.Arg360Gln
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000201963
  ensembl transcript: ENST00000201963
  gene symbol: DNMT3B
  hgvsc: ENST00000201963.3:c.1115G>A
  hgvsp: ENSP00000201963.3:p.Arg372Gln
  variant of: http://identifiers.org/hgnc/2979
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5905
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1759
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4747
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4733
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1505
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2341
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 890
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3179
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3095
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1859
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3728
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6295
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6661
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1216
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6858
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5656
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1593
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Arg380Gln
num of homozygotes: 0
population: Latino
population: East Asian
population: Other
population: African
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum

20-31383228-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31383228
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 31383228
    reference: chr 20
allele count: 1
allele frequency: 8.256002113536541e-6
allele num: 121124
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000412305
  ensembl transcript: ENST00000456297
  gene symbol: DNMT3B
  hgvsc: ENST00000456297.2:c.852A>G
  hgvsp: ENST00000456297.2:c.852A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000201963
  ensembl transcript: ENST00000201963
  gene symbol: DNMT3B
  hgvsc: ENST00000201963.3:c.1116A>G
  hgvsp: ENST00000201963.3:c.1116A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000403169
  ensembl transcript: ENST00000443239
  gene symbol: DNMT3B
  hgvsc: ENST00000443239.3:c.954A>G
  hgvsp: ENST00000443239.3:c.954A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000364774
  ensembl transcript: ENST00000375623
  gene symbol: DNMT3B
  hgvsc: ENST00000375623.4:c.809A>G
  hgvsp: ENSP00000364774.4:p.Glu270Gly
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000313397
  ensembl transcript: ENST00000353855
  gene symbol: DNMT3B
  hgvsc: ENST00000353855.2:c.1080A>G
  hgvsp: ENST00000353855.2:c.1080A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000337764
  ensembl transcript: ENST00000348286
  gene symbol: DNMT3B
  hgvsc: ENST00000348286.2:c.1080A>G
  hgvsp: ENST00000348286.2:c.1080A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000345105
  ensembl transcript: ENST00000344505
  gene symbol: DNMT3B
  hgvsc: ENST00000344505.4:c.1080A>G
  hgvsp: ENST00000344505.4:c.1080A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000328547
  ensembl transcript: ENST00000328111
  gene symbol: DNMT3B
  hgvsc: ENST00000328111.2:c.1140A>G
  hgvsp: ENST00000328111.2:c.1140A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/2979
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3728
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4746
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1859
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4733
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3094
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5905
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6294
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6859
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2341
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3181
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1760
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6661
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5656
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1216
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 907
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1505
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Glu270Gly
num of homozygotes: 0
population: Other
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: A
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: FS

20-31383232-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31383232
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 31383232
    reference: chr 20
allele count: 64
allele frequency: 5.28235857310289e-4
allele num: 121158
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000337764
  ensembl transcript: ENST00000348286
  gene symbol: DNMT3B
  hgvsc: ENST00000348286.2:c.1084C>T
  hgvsp: ENSP00000337764.2:p.Arg362Cys
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000313397
  ensembl transcript: ENST00000353855
  gene symbol: DNMT3B
  hgvsc: ENST00000353855.2:c.1084C>T
  hgvsp: ENSP00000313397.4:p.Arg362Cys
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000201963
  ensembl transcript: ENST00000201963
  gene symbol: DNMT3B
  hgvsc: ENST00000201963.3:c.1120C>T
  hgvsp: ENSP00000201963.3:p.Arg374Cys
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000328547
  ensembl transcript: ENST00000328111
  gene symbol: DNMT3B
  hgvsc: ENST00000328111.2:c.1144C>T
  hgvsp: ENSP00000328547.2:p.Arg382Cys
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000412305
  ensembl transcript: ENST00000456297
  gene symbol: DNMT3B
  hgvsc: ENST00000456297.2:c.856C>T
  hgvsp: ENSP00000412305.1:p.Arg286Cys
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000345105
  ensembl transcript: ENST00000344505
  gene symbol: DNMT3B
  hgvsc: ENST00000344505.4:c.1084C>T
  hgvsp: ENSP00000345105.4:p.Arg362Cys
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000364774
  ensembl transcript: ENST00000375623
  gene symbol: DNMT3B
  hgvsc: ENST00000375623.4:c.813C>T
  hgvsp: ENST00000375623.4:c.813C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000403169
  ensembl transcript: ENST00000443239
  gene symbol: DNMT3B
  hgvsc: ENST00000443239.3:c.958C>T
  hgvsp: ENSP00000403169.2:p.Arg320Cys
  variant of: http://identifiers.org/hgnc/2979
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 941
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2339
  bin: 7.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6860
  bin: 4.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 5661
  bin: 9.75e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 3729
  bin: 6.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 6660
  bin: 5.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3095
  bin: 7.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 6293
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4744
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4731
  bin: 6.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1761
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3179
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1503
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1859
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1219
  bin: 9.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 5907
  bin: 5.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 1470
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 126
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Arg382Cys
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: Latino
population: European (Finnish)
population: East Asian
population: South Asian
population: African
reference allele: C
site quality: DP
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum

20-31383233-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31383233
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 31383233
    reference: chr 20
allele count: 1
allele frequency: 8.252459232851389e-6
allele num: 121176
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000403169
  ensembl transcript: ENST00000443239
  gene symbol: DNMT3B
  hgvsc: ENST00000443239.3:c.959G>A
  hgvsp: ENSP00000403169.2:p.Arg320His
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000201963
  ensembl transcript: ENST00000201963
  gene symbol: DNMT3B
  hgvsc: ENST00000201963.3:c.1121G>A
  hgvsp: ENSP00000201963.3:p.Arg374His
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000412305
  ensembl transcript: ENST00000456297
  gene symbol: DNMT3B
  hgvsc: ENST00000456297.2:c.857G>A
  hgvsp: ENSP00000412305.1:p.Arg286His
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000337764
  ensembl transcript: ENST00000348286
  gene symbol: DNMT3B
  hgvsc: ENST00000348286.2:c.1085G>A
  hgvsp: ENSP00000337764.2:p.Arg362His
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000364774
  ensembl transcript: ENST00000375623
  gene symbol: DNMT3B
  hgvsc: ENST00000375623.4:c.814G>A
  hgvsp: ENSP00000364774.4:p.Ala272Thr
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000345105
  ensembl transcript: ENST00000344505
  gene symbol: DNMT3B
  hgvsc: ENST00000344505.4:c.1085G>A
  hgvsp: ENSP00000345105.4:p.Arg362His
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000313397
  ensembl transcript: ENST00000353855
  gene symbol: DNMT3B
  hgvsc: ENST00000353855.2:c.1085G>A
  hgvsp: ENSP00000313397.4:p.Arg362His
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000328547
  ensembl transcript: ENST00000328111
  gene symbol: DNMT3B
  hgvsc: ENST00000328111.2:c.1145G>A
  hgvsp: ENSP00000328547.2:p.Arg382His
  variant of: http://identifiers.org/hgnc/2979
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1214
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5911
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6300
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 948
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3726
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1501
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4748
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1862
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4728
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6862
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3184
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5650
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6667
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1766
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3091
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2334
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1958
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2045
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48202
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Arg382His
num of homozygotes: 0
population: Other
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
reference allele: G
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum

20-31383233-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31383233
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 31383233
    reference: chr 20
allele count: 1
allele frequency: 8.252459232851389e-6
allele num: 121176
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000364774
  ensembl transcript: ENST00000375623
  gene symbol: DNMT3B
  hgvsc: ENST00000375623.4:c.814G>T
  hgvsp: ENSP00000364774.4:p.Ala272Ser
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000328547
  ensembl transcript: ENST00000328111
  gene symbol: DNMT3B
  hgvsc: ENST00000328111.2:c.1145G>T
  hgvsp: ENSP00000328547.2:p.Arg382Leu
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000313397
  ensembl transcript: ENST00000353855
  gene symbol: DNMT3B
  hgvsc: ENST00000353855.2:c.1085G>T
  hgvsp: ENSP00000313397.4:p.Arg362Leu
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000412305
  ensembl transcript: ENST00000456297
  gene symbol: DNMT3B
  hgvsc: ENST00000456297.2:c.857G>T
  hgvsp: ENSP00000412305.1:p.Arg286Leu
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000337764
  ensembl transcript: ENST00000348286
  gene symbol: DNMT3B
  hgvsc: ENST00000348286.2:c.1085G>T
  hgvsp: ENSP00000337764.2:p.Arg362Leu
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000345105
  ensembl transcript: ENST00000344505
  gene symbol: DNMT3B
  hgvsc: ENST00000344505.4:c.1085G>T
  hgvsp: ENSP00000345105.4:p.Arg362Leu
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000201963
  ensembl transcript: ENST00000201963
  gene symbol: DNMT3B
  hgvsc: ENST00000201963.3:c.1121G>T
  hgvsp: ENSP00000201963.3:p.Arg374Leu
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000403169
  ensembl transcript: ENST00000443239
  gene symbol: DNMT3B
  hgvsc: ENST00000443239.3:c.959G>T
  hgvsp: ENSP00000403169.2:p.Arg320Leu
  variant of: http://identifiers.org/hgnc/2979
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5650
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6667
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 948
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1862
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3184
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6862
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5911
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1766
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6300
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3091
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2334
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4728
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1214
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4748
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3726
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1501
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1204
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1596
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Arg382Leu
num of homozygotes: 0
population: Latino
population: South Asian
population: Other
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum

20-31383234-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31383234
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 31383234
    reference: chr 20
allele count: 1
allele frequency: 8.251642076773278e-6
allele num: 121188
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000328547
  ensembl transcript: ENST00000328111
  gene symbol: DNMT3B
  hgvsc: ENST00000328111.2:c.1146C>T
  hgvsp: ENST00000328111.2:c.1146C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000313397
  ensembl transcript: ENST00000353855
  gene symbol: DNMT3B
  hgvsc: ENST00000353855.2:c.1086C>T
  hgvsp: ENST00000353855.2:c.1086C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000364774
  ensembl transcript: ENST00000375623
  gene symbol: DNMT3B
  hgvsc: ENST00000375623.4:c.815C>T
  hgvsp: ENSP00000364774.4:p.Ala272Val
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000345105
  ensembl transcript: ENST00000344505
  gene symbol: DNMT3B
  hgvsc: ENST00000344505.4:c.1086C>T
  hgvsp: ENST00000344505.4:c.1086C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000337764
  ensembl transcript: ENST00000348286
  gene symbol: DNMT3B
  hgvsc: ENST00000348286.2:c.1086C>T
  hgvsp: ENST00000348286.2:c.1086C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000403169
  ensembl transcript: ENST00000443239
  gene symbol: DNMT3B
  hgvsc: ENST00000443239.3:c.960C>T
  hgvsp: ENST00000443239.3:c.960C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000412305
  ensembl transcript: ENST00000456297
  gene symbol: DNMT3B
  hgvsc: ENST00000456297.2:c.858C>T
  hgvsp: ENST00000456297.2:c.858C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000201963
  ensembl transcript: ENST00000201963
  gene symbol: DNMT3B
  hgvsc: ENST00000201963.3:c.1122C>T
  hgvsp: ENST00000201963.3:c.1122C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2979
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1214
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5913
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5650
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1767
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3726
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6300
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4748
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1861
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6863
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6665
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 953
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4728
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3183
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3091
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2334
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1501
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1959
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2317
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Ala272Val
num of homozygotes: 0
population: Other
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
population: East Asian
reference allele: C
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum

20-31383238-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31383238
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 31383238
    reference: chr 20
allele count: 962
allele frequency: 7.936246040126715e-3
allele num: 121216
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000403169
  ensembl transcript: ENST00000443239
  gene symbol: DNMT3B
  hgvsc: ENST00000443239.3:c.964G>A
  hgvsp: ENSP00000403169.2:p.Ala322Thr
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000412305
  ensembl transcript: ENST00000456297
  gene symbol: DNMT3B
  hgvsc: ENST00000456297.2:c.862G>A
  hgvsp: ENSP00000412305.1:p.Ala288Thr
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000201963
  ensembl transcript: ENST00000201963
  gene symbol: DNMT3B
  hgvsc: ENST00000201963.3:c.1126G>A
  hgvsp: ENSP00000201963.3:p.Ala376Thr
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000313397
  ensembl transcript: ENST00000353855
  gene symbol: DNMT3B
  hgvsc: ENST00000353855.2:c.1090G>A
  hgvsp: ENSP00000313397.4:p.Ala364Thr
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000328547
  ensembl transcript: ENST00000328111
  gene symbol: DNMT3B
  hgvsc: ENST00000328111.2:c.1150G>A
  hgvsp: ENSP00000328547.2:p.Ala384Thr
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000337764
  ensembl transcript: ENST00000348286
  gene symbol: DNMT3B
  hgvsc: ENST00000348286.2:c.1090G>A
  hgvsp: ENSP00000337764.2:p.Ala364Thr
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000345105
  ensembl transcript: ENST00000344505
  gene symbol: DNMT3B
  hgvsc: ENST00000344505.4:c.1090G>A
  hgvsp: ENSP00000345105.4:p.Ala364Thr
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000364774
  ensembl transcript: ENST00000375623
  gene symbol: DNMT3B
  hgvsc: ENST00000375623.4:c.819G>A
  hgvsp: ENST00000375623.4:c.819G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2979
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3728
  bin: 6.75e1
  variant carriers: 77
genotype depth: GenotypeDepth
  all individuals: 1509
  bin: 8.75e1
  variant carriers: 75
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3178
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1771
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4736
  bin: 3.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 6868
  bin: 4.75e1
  variant carriers: 27
genotype depth: GenotypeDepth
  all individuals: 3067
  bin: 7.25e1
  variant carriers: 71
genotype depth: GenotypeDepth
  all individuals: 5891
  bin: 5.75e1
  variant carriers: 50
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 6652
  bin: 5.25e1
  variant carriers: 41
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1212
  bin: 9.25e1
  variant carriers: 50
genotype depth: GenotypeDepth
  all individuals: 966
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6289
  bin: 4.25e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 2339
  bin: 7.75e1
  variant carriers: 74
genotype depth: GenotypeDepth
  all individuals: 5733
  bin: 9.75e1
  variant carriers: 311
genotype depth: GenotypeDepth
  all individuals: 4721
  bin: 6.25e1
  variant carriers: 63
genotype depth: GenotypeDepth
  all individuals: 1868
  bin: 8.25e1
  variant carriers: 84
genotype quality: GenotypeQuality
  all individuals: 1205
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1467
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1950
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Ala384Thr
num of homozygotes: 4
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: African
population: East Asian
population: South Asian
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum

20-31383243-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31383243
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 31383243
    reference: chr 20
allele count: 4
allele frequency: 3.298533801725133e-5
allele num: 121266
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000403169
  ensembl transcript: ENST00000443239
  gene symbol: DNMT3B
  hgvsc: ENST00000443239.3:c.969C>T
  hgvsp: ENST00000443239.3:c.969C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000328547
  ensembl transcript: ENST00000328111
  gene symbol: DNMT3B
  hgvsc: ENST00000328111.2:c.1155C>T
  hgvsp: ENST00000328111.2:c.1155C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000313397
  ensembl transcript: ENST00000353855
  gene symbol: DNMT3B
  hgvsc: ENST00000353855.2:c.1095C>T
  hgvsp: ENST00000353855.2:c.1095C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000201963
  ensembl transcript: ENST00000201963
  gene symbol: DNMT3B
  hgvsc: ENST00000201963.3:c.1131C>T
  hgvsp: ENST00000201963.3:c.1131C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000337764
  ensembl transcript: ENST00000348286
  gene symbol: DNMT3B
  hgvsc: ENST00000348286.2:c.1095C>T
  hgvsp: ENST00000348286.2:c.1095C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000364774
  ensembl transcript: ENST00000375623
  gene symbol: DNMT3B
  hgvsc: ENST00000375623.4:c.824C>T
  hgvsp: ENSP00000364774.4:p.Thr275Met
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000345105
  ensembl transcript: ENST00000344505
  gene symbol: DNMT3B
  hgvsc: ENST00000344505.4:c.1095C>T
  hgvsp: ENST00000344505.4:c.1095C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000412305
  ensembl transcript: ENST00000456297
  gene symbol: DNMT3B
  hgvsc: ENST00000456297.2:c.867C>T
  hgvsp: ENST00000456297.2:c.867C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2979
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1447
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5924
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1805
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3722
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6363
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4791
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5543
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6728
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3217
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3047
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6971
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4738
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1808
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 998
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1177
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2298
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1615
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2109
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Thr275Met
num of homozygotes: 0
population: Latino
population: Other
population: South Asian
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: InbreedingCoeff

20-31383244-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31383244
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 31383244
    reference: chr 20
allele count: 1
allele frequency: 8.245790523937529e-6
allele num: 121274
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000412305
  ensembl transcript: ENST00000456297
  gene symbol: DNMT3B
  hgvsc: ENST00000456297.2:c.868G>C
  hgvsp: ENSP00000412305.1:p.Asp290His
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000345105
  ensembl transcript: ENST00000344505
  gene symbol: DNMT3B
  hgvsc: ENST00000344505.4:c.1096G>C
  hgvsp: ENSP00000345105.4:p.Asp366His
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000201963
  ensembl transcript: ENST00000201963
  gene symbol: DNMT3B
  hgvsc: ENST00000201963.3:c.1132G>C
  hgvsp: ENSP00000201963.3:p.Asp378His
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000328547
  ensembl transcript: ENST00000328111
  gene symbol: DNMT3B
  hgvsc: ENST00000328111.2:c.1156G>C
  hgvsp: ENSP00000328547.2:p.Asp386His
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000403169
  ensembl transcript: ENST00000443239
  gene symbol: DNMT3B
  hgvsc: ENST00000443239.3:c.970G>C
  hgvsp: ENSP00000403169.2:p.Asp324His
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000364774
  ensembl transcript: ENST00000375623
  gene symbol: DNMT3B
  hgvsc: ENST00000375623.4:c.825G>C
  hgvsp: ENST00000375623.4:c.825G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000313397
  ensembl transcript: ENST00000353855
  gene symbol: DNMT3B
  hgvsc: ENST00000353855.2:c.1096G>C
  hgvsp: ENSP00000313397.4:p.Asp366His
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000337764
  ensembl transcript: ENST00000348286
  gene symbol: DNMT3B
  hgvsc: ENST00000348286.2:c.1096G>C
  hgvsp: ENSP00000337764.2:p.Asp366His
  variant of: http://identifiers.org/hgnc/2979
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3046
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1804
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3721
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1808
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1003
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4738
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6972
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2296
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3221
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1447
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5925
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4794
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1177
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5543
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6729
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6361
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1490
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1615
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1215
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Asp386His
num of homozygotes: 0
population: Latino
population: African
population: Other
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: European (Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: InbreedingCoeff

20-31383247-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31383247
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 31383247
    reference: chr 20
allele count: 1
allele frequency: 8.244159013339049e-6
allele num: 121298
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000328547
  ensembl transcript: ENST00000328111
  gene symbol: DNMT3B
  hgvsc: ENST00000328111.2:c.1159T>C
  hgvsp: ENSP00000328547.2:p.Ser387Pro
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000337764
  ensembl transcript: ENST00000348286
  gene symbol: DNMT3B
  hgvsc: ENST00000348286.2:c.1099T>C
  hgvsp: ENSP00000337764.2:p.Ser367Pro
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000313397
  ensembl transcript: ENST00000353855
  gene symbol: DNMT3B
  hgvsc: ENST00000353855.2:c.1099T>C
  hgvsp: ENSP00000313397.4:p.Ser367Pro
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000412305
  ensembl transcript: ENST00000456297
  gene symbol: DNMT3B
  hgvsc: ENST00000456297.2:c.871T>C
  hgvsp: ENSP00000412305.1:p.Ser291Pro
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000403169
  ensembl transcript: ENST00000443239
  gene symbol: DNMT3B
  hgvsc: ENST00000443239.3:c.973T>C
  hgvsp: ENSP00000403169.2:p.Ser325Pro
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000201963
  ensembl transcript: ENST00000201963
  gene symbol: DNMT3B
  hgvsc: ENST00000201963.3:c.1135T>C
  hgvsp: ENSP00000201963.3:p.Ser379Pro
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000345105
  ensembl transcript: ENST00000344505
  gene symbol: DNMT3B
  hgvsc: ENST00000344505.4:c.1099T>C
  hgvsp: ENSP00000345105.4:p.Ser367Pro
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000364774
  ensembl transcript: ENST00000375623
  gene symbol: DNMT3B
  hgvsc: ENST00000375623.4:c.828T>C
  hgvsp: ENST00000375623.4:c.828T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2979
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3218
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4791
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1014
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6730
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3045
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1177
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4738
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6972
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3722
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1447
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1808
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5925
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5543
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1808
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6361
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2295
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1214
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2127
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Ser387Pro
num of homozygotes: 0
population: African
population: East Asian
population: South Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
reference allele: T
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff

http://identifiers.org/exac.variant/20-31383251-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31383251
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 31383251
    reference: chr 20
allele count: 2
allele frequency: 1.648505629646725e-5
allele num: 121322
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000345105
  ensembl transcript: ENST00000344505
  gene symbol: DNMT3B
  hgvsc: ENST00000344505.4:c.1103C>A
  hgvsp: ENSP00000345105.4:p.Ala368Asp
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000364774
  ensembl transcript: ENST00000375623
  gene symbol: DNMT3B
  hgvsc: ENST00000375623.4:c.832C>A
  hgvsp: ENSP00000364774.4:p.Pro278Thr
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000201963
  ensembl transcript: ENST00000201963
  gene symbol: DNMT3B
  hgvsc: ENST00000201963.3:c.1139C>A
  hgvsp: ENSP00000201963.3:p.Ala380Asp
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000403169
  ensembl transcript: ENST00000443239
  gene symbol: DNMT3B
  hgvsc: ENST00000443239.3:c.977C>A
  hgvsp: ENSP00000403169.2:p.Ala326Asp
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000412305
  ensembl transcript: ENST00000456297
  gene symbol: DNMT3B
  hgvsc: ENST00000456297.2:c.875C>A
  hgvsp: ENSP00000412305.1:p.Ala292Asp
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000328547
  ensembl transcript: ENST00000328111
  gene symbol: DNMT3B
  hgvsc: ENST00000328111.2:c.1163C>A
  hgvsp: ENSP00000328547.2:p.Ala388Asp
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000337764
  ensembl transcript: ENST00000348286
  gene symbol: DNMT3B
  hgvsc: ENST00000348286.2:c.1103C>A
  hgvsp: ENSP00000337764.2:p.Ala368Asp
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000313397
  ensembl transcript: ENST00000353855
  gene symbol: DNMT3B
  hgvsc: ENST00000353855.2:c.1103C>A
  hgvsp: ENSP00000313397.4:p.Ala368Asp
  variant of: http://identifiers.org/hgnc/2979
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3215
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3721
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1026
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6973
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4737
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4789
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5544
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1821
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3045
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6360
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1447
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1808
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6731
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5925
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1177
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2295
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2132
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Ala388Asp
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
population: European (Finnish)
reference allele: C
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: DP

20-31383255-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31383255
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 31383255
    reference: chr 20
allele count: 1
allele frequency: 8.241441263248117e-6
allele num: 121338
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000328547
  ensembl transcript: ENST00000328111
  gene symbol: DNMT3B
  hgvsc: ENST00000328111.2:c.1167C>T
  hgvsp: ENST00000328111.2:c.1167C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000403169
  ensembl transcript: ENST00000443239
  gene symbol: DNMT3B
  hgvsc: ENST00000443239.3:c.981C>T
  hgvsp: ENST00000443239.3:c.981C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000345105
  ensembl transcript: ENST00000344505
  gene symbol: DNMT3B
  hgvsc: ENST00000344505.4:c.1107C>T
  hgvsp: ENST00000344505.4:c.1107C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000337764
  ensembl transcript: ENST00000348286
  gene symbol: DNMT3B
  hgvsc: ENST00000348286.2:c.1107C>T
  hgvsp: ENST00000348286.2:c.1107C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000313397
  ensembl transcript: ENST00000353855
  gene symbol: DNMT3B
  hgvsc: ENST00000353855.2:c.1107C>T
  hgvsp: ENST00000353855.2:c.1107C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000364774
  ensembl transcript: ENST00000375623
  gene symbol: DNMT3B
  hgvsc: ENST00000375623.4:c.836C>T
  hgvsp: ENSP00000364774.4:p.Pro279Leu
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000201963
  ensembl transcript: ENST00000201963
  gene symbol: DNMT3B
  hgvsc: ENST00000201963.3:c.1143C>T
  hgvsp: ENST00000201963.3:c.1143C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000412305
  ensembl transcript: ENST00000456297
  gene symbol: DNMT3B
  hgvsc: ENST00000456297.2:c.879C>T
  hgvsp: ENST00000456297.2:c.879C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2979
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1808
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6972
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4787
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1447
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4737
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1177
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5544
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3216
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1816
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3721
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5925
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6358
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1041
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6730
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2295
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3045
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1614
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Pro279Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: South Asian
population: East Asian
population: Latino
population: Other
reference allele: C
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff

20-31383258-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31383258
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 31383258
    reference: chr 20
allele count: 3
allele frequency: 2.47222863170386e-5
allele num: 121348
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000313397
  ensembl transcript: ENST00000353855
  gene symbol: DNMT3B
  hgvsc: ENST00000353855.2:c.1110T>C
  hgvsp: ENST00000353855.2:c.1110T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000403169
  ensembl transcript: ENST00000443239
  gene symbol: DNMT3B
  hgvsc: ENST00000443239.3:c.984T>C
  hgvsp: ENST00000443239.3:c.984T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000412305
  ensembl transcript: ENST00000456297
  gene symbol: DNMT3B
  hgvsc: ENST00000456297.2:c.882T>C
  hgvsp: ENST00000456297.2:c.882T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000345105
  ensembl transcript: ENST00000344505
  gene symbol: DNMT3B
  hgvsc: ENST00000344505.4:c.1110T>C
  hgvsp: ENST00000344505.4:c.1110T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000364774
  ensembl transcript: ENST00000375623
  gene symbol: DNMT3B
  hgvsc: ENST00000375623.4:c.839T>C
  hgvsp: ENSP00000364774.4:p.Leu280Pro
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000328547
  ensembl transcript: ENST00000328111
  gene symbol: DNMT3B
  hgvsc: ENST00000328111.2:c.1170T>C
  hgvsp: ENST00000328111.2:c.1170T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000337764
  ensembl transcript: ENST00000348286
  gene symbol: DNMT3B
  hgvsc: ENST00000348286.2:c.1110T>C
  hgvsp: ENST00000348286.2:c.1110T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000201963
  ensembl transcript: ENST00000201963
  gene symbol: DNMT3B
  hgvsc: ENST00000201963.3:c.1146T>C
  hgvsp: ENST00000201963.3:c.1146T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2979
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1808
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3224
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6728
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1040
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6974
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6355
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1446
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4735
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3723
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4786
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5925
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2294
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3046
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5544
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1177
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1820
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2156
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1700
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Leu280Pro
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: T
site quality: DP
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum

20-31383259-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31383259
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 31383259
    reference: chr 20
allele count: 3
allele frequency: 2.472147142197904e-5
allele num: 121352
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000364774
  ensembl transcript: ENST00000375623
  gene symbol: DNMT3B
  hgvsc: ENST00000375623.4:c.840G>T
  hgvsp: ENST00000375623.4:c.840G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000345105
  ensembl transcript: ENST00000344505
  gene symbol: DNMT3B
  hgvsc: ENST00000344505.4:c.1111G>T
  hgvsp: ENSP00000345105.4:p.Asp371Tyr
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000201963
  ensembl transcript: ENST00000201963
  gene symbol: DNMT3B
  hgvsc: ENST00000201963.3:c.1147G>T
  hgvsp: ENSP00000201963.3:p.Asp383Tyr
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000337764
  ensembl transcript: ENST00000348286
  gene symbol: DNMT3B
  hgvsc: ENST00000348286.2:c.1111G>T
  hgvsp: ENSP00000337764.2:p.Asp371Tyr
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000403169
  ensembl transcript: ENST00000443239
  gene symbol: DNMT3B
  hgvsc: ENST00000443239.3:c.985G>T
  hgvsp: ENSP00000403169.2:p.Asp329Tyr
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000412305
  ensembl transcript: ENST00000456297
  gene symbol: DNMT3B
  hgvsc: ENST00000456297.2:c.883G>T
  hgvsp: ENSP00000412305.1:p.Asp295Tyr
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000328547
  ensembl transcript: ENST00000328111
  gene symbol: DNMT3B
  hgvsc: ENST00000328111.2:c.1171G>T
  hgvsp: ENSP00000328547.2:p.Asp391Tyr
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000313397
  ensembl transcript: ENST00000353855
  gene symbol: DNMT3B
  hgvsc: ENST00000353855.2:c.1111G>T
  hgvsp: ENSP00000313397.4:p.Asp371Tyr
  variant of: http://identifiers.org/hgnc/2979
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 3722
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1808
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4786
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6355
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5544
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2294
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4736
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1823
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5925
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6728
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1041
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3222
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3046
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6974
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1177
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1446
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2333
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1697
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2152
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Asp391Tyr
num of homozygotes: 0
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: East Asian
population: African
population: Latino
population: South Asian
reference allele: G
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: DP

http://identifiers.org/exac.variant/20-31383270-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31383270
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 31383270
    reference: chr 20
allele count: 2
allele frequency: 1.647962294622699e-5
allele num: 121362
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000403169
  ensembl transcript: ENST00000443239
  gene symbol: DNMT3B
  hgvsc: ENST00000443239.3:c.996C>A
  hgvsp: ENST00000443239.3:c.996C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000313397
  ensembl transcript: ENST00000353855
  gene symbol: DNMT3B
  hgvsc: ENST00000353855.2:c.1122C>A
  hgvsp: ENST00000353855.2:c.1122C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000337764
  ensembl transcript: ENST00000348286
  gene symbol: DNMT3B
  hgvsc: ENST00000348286.2:c.1122C>A
  hgvsp: ENST00000348286.2:c.1122C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000328547
  ensembl transcript: ENST00000328111
  gene symbol: DNMT3B
  hgvsc: ENST00000328111.2:c.1182C>A
  hgvsp: ENST00000328111.2:c.1182C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000345105
  ensembl transcript: ENST00000344505
  gene symbol: DNMT3B
  hgvsc: ENST00000344505.4:c.1122C>A
  hgvsp: ENST00000344505.4:c.1122C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000412305
  ensembl transcript: ENST00000456297
  gene symbol: DNMT3B
  hgvsc: ENST00000456297.2:c.894C>A
  hgvsp: ENST00000456297.2:c.894C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000364774
  ensembl transcript: ENST00000375623
  gene symbol: DNMT3B
  hgvsc: ENST00000375623.4:c.851C>A
  hgvsp: ENSP00000364774.4:p.Pro284Gln
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000201963
  ensembl transcript: ENST00000201963
  gene symbol: DNMT3B
  hgvsc: ENST00000201963.3:c.1158C>A
  hgvsp: ENST00000201963.3:c.1158C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2979
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6978
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6347
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1446
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1178
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3045
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3722
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6727
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5925
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4787
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3213
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1808
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1028
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1829
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4735
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2294
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5544
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2329
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Pro284Gln
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
population: European (Finnish)
population: South Asian
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD

20-31383270-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31383270
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 31383270
    reference: chr 20
allele count: 2
allele frequency: 1.647962294622699e-5
allele num: 121362
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000337764
  ensembl transcript: ENST00000348286
  gene symbol: DNMT3B
  hgvsc: ENST00000348286.2:c.1122C>T
  hgvsp: ENST00000348286.2:c.1122C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000403169
  ensembl transcript: ENST00000443239
  gene symbol: DNMT3B
  hgvsc: ENST00000443239.3:c.996C>T
  hgvsp: ENST00000443239.3:c.996C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000364774
  ensembl transcript: ENST00000375623
  gene symbol: DNMT3B
  hgvsc: ENST00000375623.4:c.851C>T
  hgvsp: ENSP00000364774.4:p.Pro284Leu
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000328547
  ensembl transcript: ENST00000328111
  gene symbol: DNMT3B
  hgvsc: ENST00000328111.2:c.1182C>T
  hgvsp: ENST00000328111.2:c.1182C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000313397
  ensembl transcript: ENST00000353855
  gene symbol: DNMT3B
  hgvsc: ENST00000353855.2:c.1122C>T
  hgvsp: ENST00000353855.2:c.1122C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000201963
  ensembl transcript: ENST00000201963
  gene symbol: DNMT3B
  hgvsc: ENST00000201963.3:c.1158C>T
  hgvsp: ENST00000201963.3:c.1158C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000345105
  ensembl transcript: ENST00000344505
  gene symbol: DNMT3B
  hgvsc: ENST00000344505.4:c.1122C>T
  hgvsp: ENST00000344505.4:c.1122C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000412305
  ensembl transcript: ENST00000456297
  gene symbol: DNMT3B
  hgvsc: ENST00000456297.2:c.894C>T
  hgvsp: ENST00000456297.2:c.894C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2979
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4735
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4787
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2294
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1829
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5544
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1808
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6978
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3722
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1028
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5925
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6347
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3045
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3213
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6727
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1446
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1178
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1979
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1208
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Pro284Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
population: South Asian
population: Other
population: European (Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD

20-31383271-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31383271
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 31383271
    reference: chr 20
allele count: 1
allele frequency: 8.239947264337508e-6
allele num: 121360
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000201963
  ensembl transcript: ENST00000201963
  gene symbol: DNMT3B
  hgvsc: ENST00000201963.3:c.1159G>A
  hgvsp: ENSP00000201963.3:p.Ala387Thr
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000328547
  ensembl transcript: ENST00000328111
  gene symbol: DNMT3B
  hgvsc: ENST00000328111.2:c.1183G>A
  hgvsp: ENSP00000328547.2:p.Ala395Thr
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000364774
  ensembl transcript: ENST00000375623
  gene symbol: DNMT3B
  hgvsc: ENST00000375623.4:c.852G>A
  hgvsp: ENST00000375623.4:c.852G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000313397
  ensembl transcript: ENST00000353855
  gene symbol: DNMT3B
  hgvsc: ENST00000353855.2:c.1123G>A
  hgvsp: ENSP00000313397.4:p.Ala375Thr
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000412305
  ensembl transcript: ENST00000456297
  gene symbol: DNMT3B
  hgvsc: ENST00000456297.2:c.895G>A
  hgvsp: ENSP00000412305.1:p.Ala299Thr
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000337764
  ensembl transcript: ENST00000348286
  gene symbol: DNMT3B
  hgvsc: ENST00000348286.2:c.1123G>A
  hgvsp: ENSP00000337764.2:p.Ala375Thr
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000403169
  ensembl transcript: ENST00000443239
  gene symbol: DNMT3B
  hgvsc: ENST00000443239.3:c.997G>A
  hgvsp: ENSP00000403169.2:p.Ala333Thr
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000345105
  ensembl transcript: ENST00000344505
  gene symbol: DNMT3B
  hgvsc: ENST00000344505.4:c.1123G>A
  hgvsp: ENSP00000345105.4:p.Ala375Thr
  variant of: http://identifiers.org/hgnc/2979
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5924
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4785
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3217
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1024
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6974
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1447
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6350
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1838
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3045
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6725
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3722
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5543
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4734
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1177
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1809
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2294
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48064
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1479
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Ala395Thr
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: Latino
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: DP

20-31383274-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31383274
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 31383274
    reference: chr 20
allele count: 3
allele frequency: 2.471780505891077e-5
allele num: 121370
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000313397
  ensembl transcript: ENST00000353855
  gene symbol: DNMT3B
  hgvsc: ENST00000353855.2:c.1126C>T
  hgvsp: ENSP00000313397.4:p.Pro376Ser
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000412305
  ensembl transcript: ENST00000456297
  gene symbol: DNMT3B
  hgvsc: ENST00000456297.2:c.898C>T
  hgvsp: ENSP00000412305.1:p.Pro300Ser
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000201963
  ensembl transcript: ENST00000201963
  gene symbol: DNMT3B
  hgvsc: ENST00000201963.3:c.1162C>T
  hgvsp: ENSP00000201963.3:p.Pro388Ser
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000403169
  ensembl transcript: ENST00000443239
  gene symbol: DNMT3B
  hgvsc: ENST00000443239.3:c.1000C>T
  hgvsp: ENSP00000403169.2:p.Pro334Ser
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000345105
  ensembl transcript: ENST00000344505
  gene symbol: DNMT3B
  hgvsc: ENST00000344505.4:c.1126C>T
  hgvsp: ENSP00000345105.4:p.Pro376Ser
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000337764
  ensembl transcript: ENST00000348286
  gene symbol: DNMT3B
  hgvsc: ENST00000348286.2:c.1126C>T
  hgvsp: ENSP00000337764.2:p.Pro376Ser
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000364774
  ensembl transcript: ENST00000375623
  gene symbol: DNMT3B
  hgvsc: ENST00000375623.4:c.855C>T
  hgvsp: ENST00000375623.4:c.855C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000328547
  ensembl transcript: ENST00000328111
  gene symbol: DNMT3B
  hgvsc: ENST00000328111.2:c.1186C>T
  hgvsp: ENSP00000328547.2:p.Pro396Ser
  variant of: http://identifiers.org/hgnc/2979
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3215
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5920
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3045
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1447
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1843
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5543
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3723
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6721
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1809
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1037
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4787
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6970
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2295
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1177
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6351
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4732
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1210
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Pro396Ser
num of homozygotes: 0
population: African
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: East Asian
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff

20-31383280-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31383280
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 31383280
    reference: chr 20
allele count: 2
allele frequency: 1.647636465490254e-5
allele num: 121386
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000345105
  ensembl transcript: ENST00000344505
  gene symbol: DNMT3B
  hgvsc: ENST00000344505.4:c.1132C>T
  hgvsp: ENSP00000345105.4:p.Arg378Cys
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000328547
  ensembl transcript: ENST00000328111
  gene symbol: DNMT3B
  hgvsc: ENST00000328111.2:c.1192C>T
  hgvsp: ENSP00000328547.2:p.Arg398Cys
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000201963
  ensembl transcript: ENST00000201963
  gene symbol: DNMT3B
  hgvsc: ENST00000201963.3:c.1168C>T
  hgvsp: ENSP00000201963.3:p.Arg390Cys
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000364774
  ensembl transcript: ENST00000375623
  gene symbol: DNMT3B
  hgvsc: ENST00000375623.4:c.861C>T
  hgvsp: ENST00000375623.4:c.861C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000313397
  ensembl transcript: ENST00000353855
  gene symbol: DNMT3B
  hgvsc: ENST00000353855.2:c.1132C>T
  hgvsp: ENSP00000313397.4:p.Arg378Cys
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000403169
  ensembl transcript: ENST00000443239
  gene symbol: DNMT3B
  hgvsc: ENST00000443239.3:c.1006C>T
  hgvsp: ENSP00000403169.2:p.Arg336Cys
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000337764
  ensembl transcript: ENST00000348286
  gene symbol: DNMT3B
  hgvsc: ENST00000348286.2:c.1132C>T
  hgvsp: ENSP00000337764.2:p.Arg378Cys
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000412305
  ensembl transcript: ENST00000456297
  gene symbol: DNMT3B
  hgvsc: ENST00000456297.2:c.904C>T
  hgvsp: ENSP00000412305.1:p.Arg302Cys
  variant of: http://identifiers.org/hgnc/2979
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1066
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4771
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5922
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1839
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3217
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2294
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3722
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1177
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1809
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6343
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4734
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6972
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3045
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1447
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6717
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5543
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1613
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1689
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Arg398Cys
num of homozygotes: 0
population: Other
population: Latino
population: East Asian
population: South Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
reference allele: C
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum

20-31383281-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31383281
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 31383281
    reference: chr 20
allele count: 3
allele frequency: 2.471576866040534e-5
allele num: 121380
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000337764
  ensembl transcript: ENST00000348286
  gene symbol: DNMT3B
  hgvsc: ENST00000348286.2:c.1133G>A
  hgvsp: ENSP00000337764.2:p.Arg378His
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000412305
  ensembl transcript: ENST00000456297
  gene symbol: DNMT3B
  hgvsc: ENST00000456297.2:c.905G>A
  hgvsp: ENSP00000412305.1:p.Arg302His
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000345105
  ensembl transcript: ENST00000344505
  gene symbol: DNMT3B
  hgvsc: ENST00000344505.4:c.1133G>A
  hgvsp: ENSP00000345105.4:p.Arg378His
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000364774
  ensembl transcript: ENST00000375623
  gene symbol: DNMT3B
  hgvsc: ENST00000375623.4:c.862G>A
  hgvsp: ENSP00000364774.4:p.Ala288Thr
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000313397
  ensembl transcript: ENST00000353855
  gene symbol: DNMT3B
  hgvsc: ENST00000353855.2:c.1133G>A
  hgvsp: ENSP00000313397.4:p.Arg378His
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000201963
  ensembl transcript: ENST00000201963
  gene symbol: DNMT3B
  hgvsc: ENST00000201963.3:c.1169G>A
  hgvsp: ENSP00000201963.3:p.Arg390His
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000328547
  ensembl transcript: ENST00000328111
  gene symbol: DNMT3B
  hgvsc: ENST00000328111.2:c.1193G>A
  hgvsp: ENSP00000328547.2:p.Arg398His
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000403169
  ensembl transcript: ENST00000443239
  gene symbol: DNMT3B
  hgvsc: ENST00000443239.3:c.1007G>A
  hgvsp: ENSP00000403169.2:p.Arg336His
  variant of: http://identifiers.org/hgnc/2979
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6340
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5921
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4770
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3223
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3722
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6973
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4734
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3045
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1447
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2294
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1178
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1838
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6717
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5543
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1065
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1808
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1609
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Arg398His
num of homozygotes: 0
population: Other
population: South Asian
population: African
population: East Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: DP

20-31383283-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31383283
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 31383283
    reference: chr 20
allele count: 6
allele frequency: 4.942827956634923e-5
allele num: 121388
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000201963
  ensembl transcript: ENST00000201963
  gene symbol: DNMT3B
  hgvsc: ENST00000201963.3:c.1171C>T
  hgvsp: ENSP00000201963.3:p.Leu391Phe
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000345105
  ensembl transcript: ENST00000344505
  gene symbol: DNMT3B
  hgvsc: ENST00000344505.4:c.1135C>T
  hgvsp: ENSP00000345105.4:p.Leu379Phe
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000364774
  ensembl transcript: ENST00000375623
  gene symbol: DNMT3B
  hgvsc: ENST00000375623.4:c.864C>T
  hgvsp: ENST00000375623.4:c.864C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000313397
  ensembl transcript: ENST00000353855
  gene symbol: DNMT3B
  hgvsc: ENST00000353855.2:c.1135C>T
  hgvsp: ENSP00000313397.4:p.Leu379Phe
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000412305
  ensembl transcript: ENST00000456297
  gene symbol: DNMT3B
  hgvsc: ENST00000456297.2:c.907C>T
  hgvsp: ENSP00000412305.1:p.Leu303Phe
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000328547
  ensembl transcript: ENST00000328111
  gene symbol: DNMT3B
  hgvsc: ENST00000328111.2:c.1195C>T
  hgvsp: ENSP00000328547.2:p.Leu399Phe
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000403169
  ensembl transcript: ENST00000443239
  gene symbol: DNMT3B
  hgvsc: ENST00000443239.3:c.1009C>T
  hgvsp: ENSP00000403169.2:p.Leu337Phe
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000337764
  ensembl transcript: ENST00000348286
  gene symbol: DNMT3B
  hgvsc: ENST00000348286.2:c.1135C>T
  hgvsp: ENSP00000337764.2:p.Leu379Phe
  variant of: http://identifiers.org/hgnc/2979
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4765
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3226
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1807
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5544
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 6968
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6339
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6716
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1841
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3046
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1178
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1075
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5920
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3722
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2294
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1447
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4734
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1209
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2332
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2175
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Leu399Phe
num of homozygotes: 0
population: East Asian
population: South Asian
population: Latino
population: European (Finnish)
population: African
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQ

http://identifiers.org/exac.variant/20-31383291-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31383291
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 31383291
    reference: chr 20
allele count: 1
allele frequency: 8.237503706876667e-6
allele num: 121396
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000328547
  ensembl transcript: ENST00000328111
  gene symbol: DNMT3B
  hgvsc: ENST00000328111.2:c.1203A>C
  hgvsp: ENST00000328111.2:c.1203A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000313397
  ensembl transcript: ENST00000353855
  gene symbol: DNMT3B
  hgvsc: ENST00000353855.2:c.1143A>C
  hgvsp: ENST00000353855.2:c.1143A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000364774
  ensembl transcript: ENST00000375623
  gene symbol: DNMT3B
  hgvsc: ENST00000375623.4:c.872A>C
  hgvsp: ENSP00000364774.4:p.Gln291Pro
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000201963
  ensembl transcript: ENST00000201963
  gene symbol: DNMT3B
  hgvsc: ENST00000201963.3:c.1179A>C
  hgvsp: ENST00000201963.3:c.1179A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000345105
  ensembl transcript: ENST00000344505
  gene symbol: DNMT3B
  hgvsc: ENST00000344505.4:c.1143A>C
  hgvsp: ENST00000344505.4:c.1143A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000412305
  ensembl transcript: ENST00000456297
  gene symbol: DNMT3B
  hgvsc: ENST00000456297.2:c.915A>C
  hgvsp: ENST00000456297.2:c.915A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000337764
  ensembl transcript: ENST00000348286
  gene symbol: DNMT3B
  hgvsc: ENST00000348286.2:c.1143A>C
  hgvsp: ENST00000348286.2:c.1143A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000403169
  ensembl transcript: ENST00000443239
  gene symbol: DNMT3B
  hgvsc: ENST00000443239.3:c.1017A>C
  hgvsp: ENST00000443239.3:c.1017A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2979
canonical: false
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6967
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6334
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1084
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3225
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5920
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1178
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1807
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6711
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3720
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2294
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4762
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4733
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1841
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1448
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5543
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3046
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Gln291Pro
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: South Asian
reference allele: A
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: VQSLOD

20-31383299-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31383299
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 31383299
    reference: chr 20
allele count: 1079
allele frequency: 8.888559377883222e-3
allele num: 121392
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000337764
  ensembl transcript: ENST00000348286
  gene symbol: DNMT3B
  hgvsc: ENST00000348286.2:c.1151A>G
  hgvsp: ENSP00000337764.2:p.Tyr384Cys
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000201963
  ensembl transcript: ENST00000201963
  gene symbol: DNMT3B
  hgvsc: ENST00000201963.3:c.1187A>G
  hgvsp: ENSP00000201963.3:p.Tyr396Cys
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000328547
  ensembl transcript: ENST00000328111
  gene symbol: DNMT3B
  hgvsc: ENST00000328111.2:c.1211A>G
  hgvsp: ENSP00000328547.2:p.Tyr404Cys
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000412305
  ensembl transcript: ENST00000456297
  gene symbol: DNMT3B
  hgvsc: ENST00000456297.2:c.923A>G
  hgvsp: ENSP00000412305.1:p.Tyr308Cys
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000364774
  ensembl transcript: ENST00000375623
  gene symbol: DNMT3B
  hgvsc: ENST00000375623.4:c.880A>G
  hgvsp: ENSP00000364774.4:p.Ile294Val
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000345105
  ensembl transcript: ENST00000344505
  gene symbol: DNMT3B
  hgvsc: ENST00000344505.4:c.1151A>G
  hgvsp: ENSP00000345105.4:p.Tyr384Cys
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000313397
  ensembl transcript: ENST00000353855
  gene symbol: DNMT3B
  hgvsc: ENST00000353855.2:c.1151A>G
  hgvsp: ENSP00000313397.4:p.Tyr384Cys
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000403169
  ensembl transcript: ENST00000443239
  gene symbol: DNMT3B
  hgvsc: ENST00000443239.3:c.1025A>G
  hgvsp: ENSP00000403169.2:p.Tyr342Cys
  variant of: http://identifiers.org/hgnc/2979
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3212
  bin: 3.25e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 4730
  bin: 6.25e1
  variant carriers: 58
genotype depth: GenotypeDepth
  all individuals: 5938
  bin: 5.75e1
  variant carriers: 101
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6944
  bin: 4.75e1
  variant carriers: 81
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3707
  bin: 6.75e1
  variant carriers: 36
genotype depth: GenotypeDepth
  all individuals: 4730
  bin: 3.75e1
  variant carriers: 32
genotype depth: GenotypeDepth
  all individuals: 6684
  bin: 5.25e1
  variant carriers: 66
genotype depth: GenotypeDepth
  all individuals: 1826
  bin: 2.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 6340
  bin: 4.25e1
  variant carriers: 77
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1770
  bin: 8.25e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 1411
  bin: 8.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 3030
  bin: 7.25e1
  variant carriers: 39
genotype depth: GenotypeDepth
  all individuals: 2271
  bin: 7.75e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 1089
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5777
  bin: 9.75e1
  variant carriers: 471
genotype depth: GenotypeDepth
  all individuals: 1139
  bin: 9.25e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 1203
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48187
  bin: 9.75e1
  variant carriers: 1036
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1480
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1588
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Tyr404Cys
num of homozygotes: 40
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: South Asian
population: Latino
population: East Asian
population: African
reference allele: A
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP

20-31383300-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31383300
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 31383300
    reference: chr 20
allele count: 15
allele frequency: 1.235645913307083e-4
allele num: 121394
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000328547
  ensembl transcript: ENST00000328111
  gene symbol: DNMT3B
  hgvsc: ENST00000328111.2:c.1212T>C
  hgvsp: ENST00000328111.2:c.1212T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000201963
  ensembl transcript: ENST00000201963
  gene symbol: DNMT3B
  hgvsc: ENST00000201963.3:c.1188T>C
  hgvsp: ENST00000201963.3:c.1188T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000364774
  ensembl transcript: ENST00000375623
  gene symbol: DNMT3B
  hgvsc: ENST00000375623.4:c.881T>C
  hgvsp: ENSP00000364774.4:p.Ile294Thr
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000412305
  ensembl transcript: ENST00000456297
  gene symbol: DNMT3B
  hgvsc: ENST00000456297.2:c.924T>C
  hgvsp: ENST00000456297.2:c.924T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000345105
  ensembl transcript: ENST00000344505
  gene symbol: DNMT3B
  hgvsc: ENST00000344505.4:c.1152T>C
  hgvsp: ENST00000344505.4:c.1152T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000313397
  ensembl transcript: ENST00000353855
  gene symbol: DNMT3B
  hgvsc: ENST00000353855.2:c.1152T>C
  hgvsp: ENST00000353855.2:c.1152T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000403169
  ensembl transcript: ENST00000443239
  gene symbol: DNMT3B
  hgvsc: ENST00000443239.3:c.1026T>C
  hgvsp: ENST00000443239.3:c.1026T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000337764
  ensembl transcript: ENST00000348286
  gene symbol: DNMT3B
  hgvsc: ENST00000348286.2:c.1152T>C
  hgvsp: ENST00000348286.2:c.1152T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2979
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4764
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1770
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3013
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1146
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6703
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3251
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5741
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6962
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1101
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4699
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6347
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1839
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2259
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5888
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1409
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3704
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1995
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1494
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Ile294Thr
num of homozygotes: 0
population: African
population: East Asian
population: South Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
reference allele: T
site quality: QD
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff

20-31383303-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31383303
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 31383303
    reference: chr 20
allele count: 21
allele frequency: 1.7298757784441e-4
allele num: 121396
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000313397
  ensembl transcript: ENST00000353855
  gene symbol: DNMT3B
  hgvsc: ENST00000353855.2:c.1155C>T
  hgvsp: ENST00000353855.2:c.1155C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000364774
  ensembl transcript: ENST00000375623
  gene symbol: DNMT3B
  hgvsc: ENST00000375623.4:c.884C>T
  hgvsp: ENSP00000364774.4:p.Thr295Ile
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000345105
  ensembl transcript: ENST00000344505
  gene symbol: DNMT3B
  hgvsc: ENST00000344505.4:c.1155C>T
  hgvsp: ENST00000344505.4:c.1155C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000337764
  ensembl transcript: ENST00000348286
  gene symbol: DNMT3B
  hgvsc: ENST00000348286.2:c.1155C>T
  hgvsp: ENST00000348286.2:c.1155C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000412305
  ensembl transcript: ENST00000456297
  gene symbol: DNMT3B
  hgvsc: ENST00000456297.2:c.927C>T
  hgvsp: ENST00000456297.2:c.927C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000328547
  ensembl transcript: ENST00000328111
  gene symbol: DNMT3B
  hgvsc: ENST00000328111.2:c.1215C>T
  hgvsp: ENST00000328111.2:c.1215C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000403169
  ensembl transcript: ENST00000443239
  gene symbol: DNMT3B
  hgvsc: ENST00000443239.3:c.1029C>T
  hgvsp: ENST00000443239.3:c.1029C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000201963
  ensembl transcript: ENST00000201963
  gene symbol: DNMT3B
  hgvsc: ENST00000201963.3:c.1191C>T
  hgvsp: ENST00000201963.3:c.1191C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2979
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1770
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6352
  bin: 4.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1147
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1119
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1409
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6697
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5739
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4761
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5887
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3243
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1831
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3012
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4701
  bin: 6.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3703
  bin: 6.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 6964
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2261
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1693
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1490
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1220
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Thr295Ile
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: Other
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff

20-31383304-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31383304
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 31383304
    reference: chr 20
allele count: 1
allele frequency: 8.237096588194593e-6
allele num: 121402
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000201963
  ensembl transcript: ENST00000201963
  gene symbol: DNMT3B
  hgvsc: ENST00000201963.3:c.1192A>G
  hgvsp: ENSP00000201963.3:p.Asn398Asp
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000364774
  ensembl transcript: ENST00000375623
  gene symbol: DNMT3B
  hgvsc: ENST00000375623.4:c.885A>G
  hgvsp: ENST00000375623.4:c.885A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000412305
  ensembl transcript: ENST00000456297
  gene symbol: DNMT3B
  hgvsc: ENST00000456297.2:c.928A>G
  hgvsp: ENSP00000412305.1:p.Asn310Asp
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000345105
  ensembl transcript: ENST00000344505
  gene symbol: DNMT3B
  hgvsc: ENST00000344505.4:c.1156A>G
  hgvsp: ENSP00000345105.4:p.Asn386Asp
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000313397
  ensembl transcript: ENST00000353855
  gene symbol: DNMT3B
  hgvsc: ENST00000353855.2:c.1156A>G
  hgvsp: ENSP00000313397.4:p.Asn386Asp
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000337764
  ensembl transcript: ENST00000348286
  gene symbol: DNMT3B
  hgvsc: ENST00000348286.2:c.1156A>G
  hgvsp: ENSP00000337764.2:p.Asn386Asp
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000403169
  ensembl transcript: ENST00000443239
  gene symbol: DNMT3B
  hgvsc: ENST00000443239.3:c.1030A>G
  hgvsp: ENSP00000403169.2:p.Asn344Asp
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000328547
  ensembl transcript: ENST00000328111
  gene symbol: DNMT3B
  hgvsc: ENST00000328111.2:c.1216A>G
  hgvsp: ENSP00000328547.2:p.Asn406Asp
  variant of: http://identifiers.org/hgnc/2979
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2259
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1130
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1824
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4702
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3238
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1770
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5889
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1147
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6964
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6348
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5739
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4766
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3699
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1409
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6696
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3014
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48035
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1607
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1693
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Asn406Asp
num of homozygotes: 0
population: African
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: East Asian
population: Other
reference allele: A
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum

20-31383306-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31383306
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 31383306
    reference: chr 20
allele count: 23
allele frequency: 1.89465706707086e-4
allele num: 121394
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000345105
  ensembl transcript: ENST00000344505
  gene symbol: DNMT3B
  hgvsc: ENST00000344505.4:c.1158C>T
  hgvsp: ENST00000344505.4:c.1158C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000313397
  ensembl transcript: ENST00000353855
  gene symbol: DNMT3B
  hgvsc: ENST00000353855.2:c.1158C>T
  hgvsp: ENST00000353855.2:c.1158C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000328547
  ensembl transcript: ENST00000328111
  gene symbol: DNMT3B
  hgvsc: ENST00000328111.2:c.1218C>T
  hgvsp: ENST00000328111.2:c.1218C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000201963
  ensembl transcript: ENST00000201963
  gene symbol: DNMT3B
  hgvsc: ENST00000201963.3:c.1194C>T
  hgvsp: ENST00000201963.3:c.1194C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000412305
  ensembl transcript: ENST00000456297
  gene symbol: DNMT3B
  hgvsc: ENST00000456297.2:c.930C>T
  hgvsp: ENST00000456297.2:c.930C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000364774
  ensembl transcript: ENST00000375623
  gene symbol: DNMT3B
  hgvsc: ENST00000375623.4:c.887C>T
  hgvsp: ENSP00000364774.4:p.Thr296Met
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000337764
  ensembl transcript: ENST00000348286
  gene symbol: DNMT3B
  hgvsc: ENST00000348286.2:c.1158C>T
  hgvsp: ENST00000348286.2:c.1158C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000403169
  ensembl transcript: ENST00000443239
  gene symbol: DNMT3B
  hgvsc: ENST00000443239.3:c.1032C>T
  hgvsp: ENST00000443239.3:c.1032C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2979
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5888
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1409
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3014
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3233
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1770
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4700
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6960
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2259
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1144
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3700
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1816
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6699
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1146
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6352
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 5742
  bin: 9.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 4760
  bin: 3.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 1215
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1988
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1690
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Thr296Met
num of homozygotes: 0
population: European (Finnish)
population: Other
population: East Asian
population: African
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP

20-31383307-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31383307
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 31383307
    reference: chr 20
allele count: 35
allele frequency: 2.883221299591407e-4
allele num: 121392
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000328547
  ensembl transcript: ENST00000328111
  gene symbol: DNMT3B
  hgvsc: ENST00000328111.2:c.1219G>A
  hgvsp: ENSP00000328547.2:p.Gly407Ser
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000403169
  ensembl transcript: ENST00000443239
  gene symbol: DNMT3B
  hgvsc: ENST00000443239.3:c.1033G>A
  hgvsp: ENSP00000403169.2:p.Gly345Ser
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000201963
  ensembl transcript: ENST00000201963
  gene symbol: DNMT3B
  hgvsc: ENST00000201963.3:c.1195G>A
  hgvsp: ENSP00000201963.3:p.Gly399Ser
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000412305
  ensembl transcript: ENST00000456297
  gene symbol: DNMT3B
  hgvsc: ENST00000456297.2:c.931G>A
  hgvsp: ENSP00000412305.1:p.Gly311Ser
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000337764
  ensembl transcript: ENST00000348286
  gene symbol: DNMT3B
  hgvsc: ENST00000348286.2:c.1159G>A
  hgvsp: ENSP00000337764.2:p.Gly387Ser
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000364774
  ensembl transcript: ENST00000375623
  gene symbol: DNMT3B
  hgvsc: ENST00000375623.4:c.888G>A
  hgvsp: ENST00000375623.4:c.888G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000345105
  ensembl transcript: ENST00000344505
  gene symbol: DNMT3B
  hgvsc: ENST00000344505.4:c.1159G>A
  hgvsp: ENSP00000345105.4:p.Gly387Ser
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000313397
  ensembl transcript: ENST00000353855
  gene symbol: DNMT3B
  hgvsc: ENST00000353855.2:c.1159G>A
  hgvsp: ENSP00000313397.4:p.Gly387Ser
  variant of: http://identifiers.org/hgnc/2979
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5742
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 3226
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6958
  bin: 4.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6700
  bin: 5.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 3014
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3694
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1146
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2260
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4768
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 6346
  bin: 4.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1409
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1821
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4704
  bin: 6.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1769
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1147
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5889
  bin: 5.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1463
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1683
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Gly407Ser
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: African
population: European (Finnish)
population: Latino
population: Other
reference allele: G
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff

20-31383309-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31383309
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 31383309
    reference: chr 20
allele count: 1
allele frequency: 8.237503706876667e-6
allele num: 121396
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000201963
  ensembl transcript: ENST00000201963
  gene symbol: DNMT3B
  hgvsc: ENST00000201963.3:c.1197C>G
  hgvsp: ENST00000201963.3:c.1197C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000313397
  ensembl transcript: ENST00000353855
  gene symbol: DNMT3B
  hgvsc: ENST00000353855.2:c.1161C>G
  hgvsp: ENST00000353855.2:c.1161C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000337764
  ensembl transcript: ENST00000348286
  gene symbol: DNMT3B
  hgvsc: ENST00000348286.2:c.1161C>G
  hgvsp: ENST00000348286.2:c.1161C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000345105
  ensembl transcript: ENST00000344505
  gene symbol: DNMT3B
  hgvsc: ENST00000344505.4:c.1161C>G
  hgvsp: ENST00000344505.4:c.1161C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000364774
  ensembl transcript: ENST00000375623
  gene symbol: DNMT3B
  hgvsc: ENST00000375623.4:c.890C>G
  hgvsp: ENSP00000364774.4:p.Ala297Gly
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000403169
  ensembl transcript: ENST00000443239
  gene symbol: DNMT3B
  hgvsc: ENST00000443239.3:c.1035C>G
  hgvsp: ENST00000443239.3:c.1035C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000412305
  ensembl transcript: ENST00000456297
  gene symbol: DNMT3B
  hgvsc: ENST00000456297.2:c.933C>G
  hgvsp: ENST00000456297.2:c.933C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000328547
  ensembl transcript: ENST00000328111
  gene symbol: DNMT3B
  hgvsc: ENST00000328111.2:c.1221C>G
  hgvsp: ENST00000328111.2:c.1221C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/2979
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3697
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3223
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1408
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5740
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5889
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4762
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1822
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6700
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6959
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3013
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1159
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2259
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1148
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6346
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4699
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1770
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1607
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1211
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1473
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Ala297Gly
num of homozygotes: 0
population: European (Finnish)
population: African
population: Other
population: South Asian
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum

20-31383317-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31383317
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 31383317
    reference: chr 20
allele count: 2
allele frequency: 1.647473599235572e-5
allele num: 121398
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000412305
  ensembl transcript: ENST00000456297
  gene symbol: DNMT3B
  hgvsc: ENST00000456297.2:c.941G>A
  hgvsp: ENSP00000412305.1:p.Arg314Gln
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000201963
  ensembl transcript: ENST00000201963
  gene symbol: DNMT3B
  hgvsc: ENST00000201963.3:c.1205G>A
  hgvsp: ENSP00000201963.3:p.Arg402Gln
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000328547
  ensembl transcript: ENST00000328111
  gene symbol: DNMT3B
  hgvsc: ENST00000328111.2:c.1229G>A
  hgvsp: ENSP00000328547.2:p.Arg410Gln
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000313397
  ensembl transcript: ENST00000353855
  gene symbol: DNMT3B
  hgvsc: ENST00000353855.2:c.1169G>A
  hgvsp: ENSP00000313397.4:p.Arg390Gln
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000364774
  ensembl transcript: ENST00000375623
  gene symbol: DNMT3B
  hgvsc: ENST00000375623.4:c.898G>A
  hgvsp: ENSP00000364774.4:p.Glu300Lys
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000345105
  ensembl transcript: ENST00000344505
  gene symbol: DNMT3B
  hgvsc: ENST00000344505.4:c.1169G>A
  hgvsp: ENSP00000345105.4:p.Arg390Gln
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000403169
  ensembl transcript: ENST00000443239
  gene symbol: DNMT3B
  hgvsc: ENST00000443239.3:c.1043G>A
  hgvsp: ENSP00000403169.2:p.Arg348Gln
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000337764
  ensembl transcript: ENST00000348286
  gene symbol: DNMT3B
  hgvsc: ENST00000348286.2:c.1169G>A
  hgvsp: ENSP00000337764.2:p.Arg390Gln
  variant of: http://identifiers.org/hgnc/2979
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4769
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3697
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6963
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1177
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1838
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2259
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6702
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5885
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1408
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3201
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6340
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4698
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1148
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1770
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3014
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5740
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1207
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1690
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1488
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Arg410Gln
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: African
population: Other
population: European (Finnish)
population: Latino
reference allele: G
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum

20-31383322-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31383322
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 31383322
    reference: chr 20
allele count: 2
allele frequency: 1.647527884409444e-5
allele num: 121394
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000201963
  ensembl transcript: ENST00000201963
  gene symbol: DNMT3B
  hgvsc: ENST00000201963.3:c.1210G>T
  hgvsp: ENSP00000201963.3:p.Asp404Tyr
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000337764
  ensembl transcript: ENST00000348286
  gene symbol: DNMT3B
  hgvsc: ENST00000348286.2:c.1174G>T
  hgvsp: ENSP00000337764.2:p.Asp392Tyr
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000364774
  ensembl transcript: ENST00000375623
  gene symbol: DNMT3B
  hgvsc: ENST00000375623.4:c.903G>T
  hgvsp: ENST00000375623.4:c.903G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000403169
  ensembl transcript: ENST00000443239
  gene symbol: DNMT3B
  hgvsc: ENST00000443239.3:c.1048G>T
  hgvsp: ENSP00000403169.2:p.Asp350Tyr
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000328547
  ensembl transcript: ENST00000328111
  gene symbol: DNMT3B
  hgvsc: ENST00000328111.2:c.1234G>T
  hgvsp: ENSP00000328547.2:p.Asp412Tyr
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000313397
  ensembl transcript: ENST00000353855
  gene symbol: DNMT3B
  hgvsc: ENST00000353855.2:c.1174G>T
  hgvsp: ENSP00000313397.4:p.Asp392Tyr
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000412305
  ensembl transcript: ENST00000456297
  gene symbol: DNMT3B
  hgvsc: ENST00000456297.2:c.946G>T
  hgvsp: ENSP00000412305.1:p.Asp316Tyr
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000345105
  ensembl transcript: ENST00000344505
  gene symbol: DNMT3B
  hgvsc: ENST00000344505.4:c.1174G>T
  hgvsp: ENSP00000345105.4:p.Asp392Tyr
  variant of: http://identifiers.org/hgnc/2979
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1844
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4770
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5740
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3696
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1770
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1148
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5885
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3201
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6340
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1408
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6703
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3014
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4697
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6959
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2259
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1179
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2184
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48043
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1214
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Asp412Tyr
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum

20-31383330-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31383330
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 31383330
    reference: chr 20
allele count: 1
allele frequency: 8.236825198095647e-6
allele num: 121406
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000403169
  ensembl transcript: ENST00000443239
  gene symbol: DNMT3B
  hgvsc: ENST00000443239.3:c.1056T>C
  hgvsp: ENST00000443239.3:c.1056T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000328547
  ensembl transcript: ENST00000328111
  gene symbol: DNMT3B
  hgvsc: ENST00000328111.2:c.1242T>C
  hgvsp: ENST00000328111.2:c.1242T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000345105
  ensembl transcript: ENST00000344505
  gene symbol: DNMT3B
  hgvsc: ENST00000344505.4:c.1182T>C
  hgvsp: ENST00000344505.4:c.1182T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000337764
  ensembl transcript: ENST00000348286
  gene symbol: DNMT3B
  hgvsc: ENST00000348286.2:c.1182T>C
  hgvsp: ENST00000348286.2:c.1182T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000412305
  ensembl transcript: ENST00000456297
  gene symbol: DNMT3B
  hgvsc: ENST00000456297.2:c.954T>C
  hgvsp: ENST00000456297.2:c.954T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000364774
  ensembl transcript: ENST00000375623
  gene symbol: DNMT3B
  hgvsc: ENST00000375623.4:c.911T>C
  hgvsp: ENSP00000364774.4:p.Ile304Thr
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000201963
  ensembl transcript: ENST00000201963
  gene symbol: DNMT3B
  hgvsc: ENST00000201963.3:c.1218T>C
  hgvsp: ENST00000201963.3:c.1218T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000313397
  ensembl transcript: ENST00000353855
  gene symbol: DNMT3B
  hgvsc: ENST00000353855.2:c.1182T>C
  hgvsp: ENST00000353855.2:c.1182T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/2979
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6703
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6336
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1408
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5740
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4774
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3194
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1186
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6959
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1770
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1834
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2258
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3015
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4696
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5885
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3696
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1148
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1604
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1692
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ile304Thr
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Other
population: African
population: European (Finnish)
reference allele: T
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: DP

20-31383334-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31383334
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 31383334
    reference: chr 20
allele count: 1
allele frequency: 8.236825198095647e-6
allele num: 121406
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000337764
  ensembl transcript: ENST00000348286
  gene symbol: DNMT3B
  hgvsc: ENST00000348286.2:c.1186A>G
  hgvsp: ENSP00000337764.2:p.Ser396Gly
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000403169
  ensembl transcript: ENST00000443239
  gene symbol: DNMT3B
  hgvsc: ENST00000443239.3:c.1060A>G
  hgvsp: ENSP00000403169.2:p.Ser354Gly
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000313397
  ensembl transcript: ENST00000353855
  gene symbol: DNMT3B
  hgvsc: ENST00000353855.2:c.1186A>G
  hgvsp: ENSP00000313397.4:p.Ser396Gly
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000364774
  ensembl transcript: ENST00000375623
  gene symbol: DNMT3B
  hgvsc: ENST00000375623.4:c.915A>G
  hgvsp: ENST00000375623.4:c.915A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000345105
  ensembl transcript: ENST00000344505
  gene symbol: DNMT3B
  hgvsc: ENST00000344505.4:c.1186A>G
  hgvsp: ENSP00000345105.4:p.Ser396Gly
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000328547
  ensembl transcript: ENST00000328111
  gene symbol: DNMT3B
  hgvsc: ENST00000328111.2:c.1246A>G
  hgvsp: ENSP00000328547.2:p.Ser416Gly
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000412305
  ensembl transcript: ENST00000456297
  gene symbol: DNMT3B
  hgvsc: ENST00000456297.2:c.958A>G
  hgvsp: ENSP00000412305.1:p.Ser320Gly
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000201963
  ensembl transcript: ENST00000201963
  gene symbol: DNMT3B
  hgvsc: ENST00000201963.3:c.1222A>G
  hgvsp: ENSP00000201963.3:p.Ser408Gly
  variant of: http://identifiers.org/hgnc/2979
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1830
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3696
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4695
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5888
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3193
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1191
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1770
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6703
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2258
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6957
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4772
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6336
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1148
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3015
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5740
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1408
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1698
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Ser416Gly
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Other
population: African
reference allele: A
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD

20-31383338-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31383338
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 31383338
    reference: chr 20
allele count: 1
allele frequency: 8.236960890909689e-6
allele num: 121404
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000412305
  ensembl transcript: ENST00000456297
  gene symbol: DNMT3B
  hgvsc: ENST00000456297.2:c.962G>A
  hgvsp: ENSP00000412305.1:p.Arg321Gln
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000328547
  ensembl transcript: ENST00000328111
  gene symbol: DNMT3B
  hgvsc: ENST00000328111.2:c.1250G>A
  hgvsp: ENSP00000328547.2:p.Arg417Gln
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000337764
  ensembl transcript: ENST00000348286
  gene symbol: DNMT3B
  hgvsc: ENST00000348286.2:c.1190G>A
  hgvsp: ENSP00000337764.2:p.Arg397Gln
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000201963
  ensembl transcript: ENST00000201963
  gene symbol: DNMT3B
  hgvsc: ENST00000201963.3:c.1226G>A
  hgvsp: ENSP00000201963.3:p.Arg409Gln
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000345105
  ensembl transcript: ENST00000344505
  gene symbol: DNMT3B
  hgvsc: ENST00000344505.4:c.1190G>A
  hgvsp: ENSP00000345105.4:p.Arg397Gln
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000364774
  ensembl transcript: ENST00000375623
  gene symbol: DNMT3B
  hgvsc: ENST00000375623.4:c.919G>A
  hgvsp: ENSP00000364774.4:p.Glu307Lys
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000313397
  ensembl transcript: ENST00000353855
  gene symbol: DNMT3B
  hgvsc: ENST00000353855.2:c.1190G>A
  hgvsp: ENSP00000313397.4:p.Arg397Gln
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000403169
  ensembl transcript: ENST00000443239
  gene symbol: DNMT3B
  hgvsc: ENST00000443239.3:c.1064G>A
  hgvsp: ENSP00000403169.2:p.Arg355Gln
  variant of: http://identifiers.org/hgnc/2979
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1408
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3015
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6705
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1770
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1189
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1148
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3696
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1840
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6961
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3192
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5887
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5740
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6338
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2258
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4773
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4695
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2168
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Arg417Gln
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Latino
population: Other
population: African
population: European (Finnish)
population: South Asian
reference allele: G
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: QD

20-31383346-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31383346
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 31383346
    reference: chr 20
allele count: 1
allele frequency: 8.236825198095647e-6
allele num: 121406
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000364774
  ensembl transcript: ENST00000375623
  gene symbol: DNMT3B
  hgvsc: ENST00000375623.4:c.921+6T>G
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000412305
  ensembl transcript: ENST00000456297
  gene symbol: DNMT3B
  hgvsc: ENST00000456297.2:c.964+6T>G
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000201963
  ensembl transcript: ENST00000201963
  gene symbol: DNMT3B
  hgvsc: ENST00000201963.3:c.1228+6T>G
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000345105
  ensembl transcript: ENST00000344505
  gene symbol: DNMT3B
  hgvsc: ENST00000344505.4:c.1192+6T>G
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000313397
  ensembl transcript: ENST00000353855
  gene symbol: DNMT3B
  hgvsc: ENST00000353855.2:c.1192+6T>G
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000403169
  ensembl transcript: ENST00000443239
  gene symbol: DNMT3B
  hgvsc: ENST00000443239.3:c.1066+6T>G
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000337764
  ensembl transcript: ENST00000348286
  gene symbol: DNMT3B
  hgvsc: ENST00000348286.2:c.1192+6T>G
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000328547
  ensembl transcript: ENST00000328111
  gene symbol: DNMT3B
  hgvsc: ENST00000328111.2:c.1252+6T>G
  variant of: http://identifiers.org/hgnc/2979
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3204
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6963
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1194
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4767
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2258
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6707
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1148
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3695
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1833
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1770
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1408
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5888
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6337
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4696
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3015
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5740
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2013
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
hgvs: c.1252+6T>G
num of homozygotes: 0
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: African
population: European (Finnish)
reference allele: T
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP

20-31383353-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31383353
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 31383353
    reference: chr 20
allele count: 58669
allele frequency: 4.835569695371225e-1
allele num: 121328
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000328547
  ensembl transcript: ENST00000328111
  gene symbol: DNMT3B
  hgvsc: ENST00000328111.2:c.1252+13T>G
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000201963
  ensembl transcript: ENST00000201963
  gene symbol: DNMT3B
  hgvsc: ENST00000201963.3:c.1228+13T>G
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000412305
  ensembl transcript: ENST00000456297
  gene symbol: DNMT3B
  hgvsc: ENST00000456297.2:c.964+13T>G
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000364774
  ensembl transcript: ENST00000375623
  gene symbol: DNMT3B
  hgvsc: ENST00000375623.4:c.921+13T>G
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000403169
  ensembl transcript: ENST00000443239
  gene symbol: DNMT3B
  hgvsc: ENST00000443239.3:c.1066+13T>G
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000313397
  ensembl transcript: ENST00000353855
  gene symbol: DNMT3B
  hgvsc: ENST00000353855.2:c.1192+13T>G
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000337764
  ensembl transcript: ENST00000348286
  gene symbol: DNMT3B
  hgvsc: ENST00000348286.2:c.1192+13T>G
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000345105
  ensembl transcript: ENST00000344505
  gene symbol: DNMT3B
  hgvsc: ENST00000344505.4:c.1192+13T>G
  variant of: http://identifiers.org/hgnc/2979
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 6200
  bin: 4.75e1
  variant carriers: 4093
genotype depth: GenotypeDepth
  all individuals: 1963
  bin: 8.25e1
  variant carriers: 1436
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 2.25e1
  variant carriers: 193
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1460
  bin: 8.75e1
  variant carriers: 1050
genotype depth: GenotypeDepth
  all individuals: 3561
  bin: 3.75e1
  variant carriers: 2143
genotype depth: GenotypeDepth
  all individuals: 1092
  bin: 2.75e1
  variant carriers: 534
genotype depth: GenotypeDepth
  all individuals: 6062
  bin: 5.75e1
  variant carriers: 4344
genotype depth: GenotypeDepth
  all individuals: 5187
  bin: 4.25e1
  variant carriers: 3236
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 1.75e1
  variant carriers: 48
genotype depth: GenotypeDepth
  all individuals: 6411
  bin: 5.25e1
  variant carriers: 4412
genotype depth: GenotypeDepth
  all individuals: 4284
  bin: 6.75e1
  variant carriers: 3156
genotype depth: GenotypeDepth
  all individuals: 2244
  bin: 3.25e1
  variant carriers: 1267
genotype depth: GenotypeDepth
  all individuals: 9277
  bin: 9.75e1
  variant carriers: 7819
genotype depth: GenotypeDepth
  all individuals: 3389
  bin: 7.25e1
  variant carriers: 2459
genotype depth: GenotypeDepth
  all individuals: 2584
  bin: 7.75e1
  variant carriers: 1891
genotype depth: GenotypeDepth
  all individuals: 1143
  bin: 9.25e1
  variant carriers: 819
genotype depth: GenotypeDepth
  all individuals: 5224
  bin: 6.25e1
  variant carriers: 3793
genotype quality: GenotypeQuality
  all individuals: 732
  bin: 6.25e1
  variant carriers: 39
genotype quality: GenotypeQuality
  all individuals: 754
  bin: 8.25e1
  variant carriers: 166
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 5.75e1
  variant carriers: 36
genotype quality: GenotypeQuality
  all individuals: 450
  bin: 7.25e1
  variant carriers: 69
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 2.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 3.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 945
  bin: 9.25e1
  variant carriers: 223
num of homozygotes: 15987
population: East Asian
population: African
population: South Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
reference allele: T
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum

20-31383354-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31383354
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 31383354
    reference: chr 20
allele count: 1
allele frequency: 8.236825198095647e-6
allele num: 121406
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000337764
  ensembl transcript: ENST00000348286
  gene symbol: DNMT3B
  hgvsc: ENST00000348286.2:c.1192+14A>G
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000403169
  ensembl transcript: ENST00000443239
  gene symbol: DNMT3B
  hgvsc: ENST00000443239.3:c.1066+14A>G
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000328547
  ensembl transcript: ENST00000328111
  gene symbol: DNMT3B
  hgvsc: ENST00000328111.2:c.1252+14A>G
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000313397
  ensembl transcript: ENST00000353855
  gene symbol: DNMT3B
  hgvsc: ENST00000353855.2:c.1192+14A>G
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000201963
  ensembl transcript: ENST00000201963
  gene symbol: DNMT3B
  hgvsc: ENST00000201963.3:c.1228+14A>G
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000364774
  ensembl transcript: ENST00000375623
  gene symbol: DNMT3B
  hgvsc: ENST00000375623.4:c.921+14A>G
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000345105
  ensembl transcript: ENST00000344505
  gene symbol: DNMT3B
  hgvsc: ENST00000344505.4:c.1192+14A>G
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000412305
  ensembl transcript: ENST00000456297
  gene symbol: DNMT3B
  hgvsc: ENST00000456297.2:c.964+14A>G
  variant of: http://identifiers.org/hgnc/2979
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3568
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5025
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6695
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5477
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7071
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7896
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3413
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1351
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 654
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1928
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4445
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2587
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6546
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 902
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1106
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1936
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1162
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1733
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: A
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: ReadPosRankSum

20-31383364-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31383364
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 31383364
    reference: chr 20
allele count: 1
allele frequency: 8.236825198095647e-6
allele num: 121406
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000412305
  ensembl transcript: ENST00000456297
  gene symbol: DNMT3B
  hgvsc: ENST00000456297.2:c.964+24A>G
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000403169
  ensembl transcript: ENST00000443239
  gene symbol: DNMT3B
  hgvsc: ENST00000443239.3:c.1066+24A>G
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000345105
  ensembl transcript: ENST00000344505
  gene symbol: DNMT3B
  hgvsc: ENST00000344505.4:c.1192+24A>G
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000337764
  ensembl transcript: ENST00000348286
  gene symbol: DNMT3B
  hgvsc: ENST00000348286.2:c.1192+24A>G
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000364774
  ensembl transcript: ENST00000375623
  gene symbol: DNMT3B
  hgvsc: ENST00000375623.4:c.921+24A>G
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000328547
  ensembl transcript: ENST00000328111
  gene symbol: DNMT3B
  hgvsc: ENST00000328111.2:c.1252+24A>G
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000313397
  ensembl transcript: ENST00000353855
  gene symbol: DNMT3B
  hgvsc: ENST00000353855.2:c.1192+24A>G
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000201963
  ensembl transcript: ENST00000201963
  gene symbol: DNMT3B
  hgvsc: ENST00000201963.3:c.1228+24A>G
  variant of: http://identifiers.org/hgnc/2979
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 680
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5013
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1928
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6690
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6548
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4442
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1900
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3546
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3413
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5478
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2587
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1351
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7074
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7896
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 902
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1106
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: South Asian
population: Latino
population: European (Finnish)
population: East Asian
population: Other
reference allele: A
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD

20-31383376-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31383376
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 31383376
    reference: chr 20
allele count: 3
allele frequency: 2.471210398853358e-5
allele num: 121398
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000328547
  ensembl transcript: ENST00000328111
  gene symbol: DNMT3B
  hgvsc: ENST00000328111.2:c.1252+36G>A
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000412305
  ensembl transcript: ENST00000456297
  gene symbol: DNMT3B
  hgvsc: ENST00000456297.2:c.964+36G>A
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000364774
  ensembl transcript: ENST00000375623
  gene symbol: DNMT3B
  hgvsc: ENST00000375623.4:c.921+36G>A
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000201963
  ensembl transcript: ENST00000201963
  gene symbol: DNMT3B
  hgvsc: ENST00000201963.3:c.1228+36G>A
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000337764
  ensembl transcript: ENST00000348286
  gene symbol: DNMT3B
  hgvsc: ENST00000348286.2:c.1192+36G>A
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000403169
  ensembl transcript: ENST00000443239
  gene symbol: DNMT3B
  hgvsc: ENST00000443239.3:c.1066+36G>A
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000313397
  ensembl transcript: ENST00000353855
  gene symbol: DNMT3B
  hgvsc: ENST00000353855.2:c.1192+36G>A
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000345105
  ensembl transcript: ENST00000344505
  gene symbol: DNMT3B
  hgvsc: ENST00000344505.4:c.1192+36G>A
  variant of: http://identifiers.org/hgnc/2979
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1856
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7073
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1106
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 732
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3523
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5479
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2585
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4442
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6547
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6686
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5009
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1928
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 902
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3416
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1351
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7896
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2472
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1600
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: Other
population: African
population: East Asian
reference allele: G
site quality: DP
site quality: MQ
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum

20-31383378-AG-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31383378
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 31383377
    reference: chr 20
allele count: 1
allele frequency: 8.236825198095647e-6
allele num: 121406
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000412305
  ensembl transcript: ENST00000456297
  gene symbol: DNMT3B
  hgvsc: ENST00000456297.2:c.964+40delG
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000345105
  ensembl transcript: ENST00000344505
  gene symbol: DNMT3B
  hgvsc: ENST00000344505.4:c.1192+40delG
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000313397
  ensembl transcript: ENST00000353855
  gene symbol: DNMT3B
  hgvsc: ENST00000353855.2:c.1192+40delG
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000201963
  ensembl transcript: ENST00000201963
  gene symbol: DNMT3B
  hgvsc: ENST00000201963.3:c.1228+40delG
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000364774
  ensembl transcript: ENST00000375623
  gene symbol: DNMT3B
  hgvsc: ENST00000375623.4:c.921+40delG
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000337764
  ensembl transcript: ENST00000348286
  gene symbol: DNMT3B
  hgvsc: ENST00000348286.2:c.1192+40delG
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000328547
  ensembl transcript: ENST00000328111
  gene symbol: DNMT3B
  hgvsc: ENST00000328111.2:c.1252+40delG
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000403169
  ensembl transcript: ENST00000443239
  gene symbol: DNMT3B
  hgvsc: ENST00000443239.3:c.1066+40delG
  variant of: http://identifiers.org/hgnc/2979
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1854
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6683
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2587
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4442
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1351
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7075
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 727
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6547
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3521
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5010
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3414
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 902
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7895
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1929
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5479
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1106
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2473
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1417
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2061
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: AG
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: MQ

20-31383379-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31383379
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 31383379
    reference: chr 20
allele count: 6
allele frequency: 4.942257952916756e-5
allele num: 121402
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000345105
  ensembl transcript: ENST00000344505
  gene symbol: DNMT3B
  hgvsc: ENST00000344505.4:c.1192+39G>A
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000328547
  ensembl transcript: ENST00000328111
  gene symbol: DNMT3B
  hgvsc: ENST00000328111.2:c.1252+39G>A
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000403169
  ensembl transcript: ENST00000443239
  gene symbol: DNMT3B
  hgvsc: ENST00000443239.3:c.1066+39G>A
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000364774
  ensembl transcript: ENST00000375623
  gene symbol: DNMT3B
  hgvsc: ENST00000375623.4:c.921+39G>A
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000313397
  ensembl transcript: ENST00000353855
  gene symbol: DNMT3B
  hgvsc: ENST00000353855.2:c.1192+39G>A
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000412305
  ensembl transcript: ENST00000456297
  gene symbol: DNMT3B
  hgvsc: ENST00000456297.2:c.964+39G>A
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000337764
  ensembl transcript: ENST00000348286
  gene symbol: DNMT3B
  hgvsc: ENST00000348286.2:c.1192+39G>A
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000201963
  ensembl transcript: ENST00000201963
  gene symbol: DNMT3B
  hgvsc: ENST00000201963.3:c.1228+39G>A
  variant of: http://identifiers.org/hgnc/2979
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5007
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7895
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6548
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3414
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7074
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3519
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1351
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6684
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 736
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1848
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4442
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1929
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5478
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2587
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1106
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 901
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2058
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1638
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48224
  bin: 9.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: African
population: South Asian
population: East Asian
population: Other
population: European (Finnish)
reference allele: G
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: DP

20-31383385-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31383385
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 31383385
    reference: chr 20
allele count: 9
allele frequency: 7.413631196560076e-5
allele num: 121398
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000412305
  ensembl transcript: ENST00000456297
  gene symbol: DNMT3B
  hgvsc: ENST00000456297.2:c.964+45C>T
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000345105
  ensembl transcript: ENST00000344505
  gene symbol: DNMT3B
  hgvsc: ENST00000344505.4:c.1192+45C>T
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000328547
  ensembl transcript: ENST00000328111
  gene symbol: DNMT3B
  hgvsc: ENST00000328111.2:c.1252+45C>T
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000337764
  ensembl transcript: ENST00000348286
  gene symbol: DNMT3B
  hgvsc: ENST00000348286.2:c.1192+45C>T
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000403169
  ensembl transcript: ENST00000443239
  gene symbol: DNMT3B
  hgvsc: ENST00000443239.3:c.1066+45C>T
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000201963
  ensembl transcript: ENST00000201963
  gene symbol: DNMT3B
  hgvsc: ENST00000201963.3:c.1228+45C>T
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000313397
  ensembl transcript: ENST00000353855
  gene symbol: DNMT3B
  hgvsc: ENST00000353855.2:c.1192+45C>T
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000364774
  ensembl transcript: ENST00000375623
  gene symbol: DNMT3B
  hgvsc: ENST00000375623.4:c.921+45C>T
  variant of: http://identifiers.org/hgnc/2979
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2588
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5478
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1107
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1350
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6549
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3413
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5011
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1833
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1929
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3486
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4443
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 901
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 792
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7896
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6683
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7071
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 131
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48226
  bin: 9.75e1
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1383
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: QD

20-31383388-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31383388
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 31383388
    reference: chr 20
allele count: 1
allele frequency: 8.236960890909689e-6
allele num: 121404
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000403169
  ensembl transcript: ENST00000443239
  gene symbol: DNMT3B
  hgvsc: ENST00000443239.3:c.1066+48T>C
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000345105
  ensembl transcript: ENST00000344505
  gene symbol: DNMT3B
  hgvsc: ENST00000344505.4:c.1192+48T>C
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000313397
  ensembl transcript: ENST00000353855
  gene symbol: DNMT3B
  hgvsc: ENST00000353855.2:c.1192+48T>C
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000364774
  ensembl transcript: ENST00000375623
  gene symbol: DNMT3B
  hgvsc: ENST00000375623.4:c.921+48T>C
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000328547
  ensembl transcript: ENST00000328111
  gene symbol: DNMT3B
  hgvsc: ENST00000328111.2:c.1252+48T>C
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000412305
  ensembl transcript: ENST00000456297
  gene symbol: DNMT3B
  hgvsc: ENST00000456297.2:c.964+48T>C
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000337764
  ensembl transcript: ENST00000348286
  gene symbol: DNMT3B
  hgvsc: ENST00000348286.2:c.1192+48T>C
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000201963
  ensembl transcript: ENST00000201963
  gene symbol: DNMT3B
  hgvsc: ENST00000201963.3:c.1228+48T>C
  variant of: http://identifiers.org/hgnc/2979
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6552
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7069
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1929
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1351
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 901
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7896
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6687
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3498
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1826
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5005
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3413
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2588
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 800
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1106
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4442
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5478
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1390
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2072
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1609
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1136
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Other
population: South Asian
population: Latino
population: African
population: European (Finnish)
reference allele: T
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff

20-31383391-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31383391
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 31383391
    reference: chr 20
allele count: 5
allele frequency: 4.118480445454845e-5
allele num: 121404
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000328547
  ensembl transcript: ENST00000328111
  gene symbol: DNMT3B
  hgvsc: ENST00000328111.2:c.1252+51A>G
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000313397
  ensembl transcript: ENST00000353855
  gene symbol: DNMT3B
  hgvsc: ENST00000353855.2:c.1192+51A>G
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000403169
  ensembl transcript: ENST00000443239
  gene symbol: DNMT3B
  hgvsc: ENST00000443239.3:c.1066+51A>G
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000337764
  ensembl transcript: ENST00000348286
  gene symbol: DNMT3B
  hgvsc: ENST00000348286.2:c.1192+51A>G
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000345105
  ensembl transcript: ENST00000344505
  gene symbol: DNMT3B
  hgvsc: ENST00000344505.4:c.1192+51A>G
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000412305
  ensembl transcript: ENST00000456297
  gene symbol: DNMT3B
  hgvsc: ENST00000456297.2:c.964+51A>G
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000364774
  ensembl transcript: ENST00000375623
  gene symbol: DNMT3B
  hgvsc: ENST00000375623.4:c.921+51A>G
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000201963
  ensembl transcript: ENST00000201963
  gene symbol: DNMT3B
  hgvsc: ENST00000201963.3:c.1228+51A>G
  variant of: http://identifiers.org/hgnc/2979
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2588
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6689
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1351
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 791
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7896
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 901
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1929
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6553
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3413
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1829
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5007
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7069
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3509
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5478
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4442
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1106
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2478
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1376
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: European (Non-Finnish)
population: South Asian
population: African
population: East Asian
population: European (Finnish)
reference allele: A
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum

20-31383392-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31383392
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 31383392
    reference: chr 20
allele count: 1
allele frequency: 8.237367996177861e-6
allele num: 121398
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000337764
  ensembl transcript: ENST00000348286
  gene symbol: DNMT3B
  hgvsc: ENST00000348286.2:c.1192+52G>A
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000364774
  ensembl transcript: ENST00000375623
  gene symbol: DNMT3B
  hgvsc: ENST00000375623.4:c.921+52G>A
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000403169
  ensembl transcript: ENST00000443239
  gene symbol: DNMT3B
  hgvsc: ENST00000443239.3:c.1066+52G>A
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000313397
  ensembl transcript: ENST00000353855
  gene symbol: DNMT3B
  hgvsc: ENST00000353855.2:c.1192+52G>A
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000412305
  ensembl transcript: ENST00000456297
  gene symbol: DNMT3B
  hgvsc: ENST00000456297.2:c.964+52G>A
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000201963
  ensembl transcript: ENST00000201963
  gene symbol: DNMT3B
  hgvsc: ENST00000201963.3:c.1228+52G>A
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000345105
  ensembl transcript: ENST00000344505
  gene symbol: DNMT3B
  hgvsc: ENST00000344505.4:c.1192+52G>A
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000328547
  ensembl transcript: ENST00000328111
  gene symbol: DNMT3B
  hgvsc: ENST00000328111.2:c.1252+52G>A
  variant of: http://identifiers.org/hgnc/2979
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7069
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5479
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2588
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5009
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1929
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1351
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 796
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6551
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6689
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4442
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7896
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 901
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1828
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1106
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3413
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3511
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1615
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1769
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2479
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Finnish)
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD

20-31383407-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31383407
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 31383407
    reference: chr 20
allele count: 1
allele frequency: 8.237503706876667e-6
allele num: 121396
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000328547
  ensembl transcript: ENST00000328111
  gene symbol: DNMT3B
  hgvsc: ENST00000328111.2:c.1253-49T>C
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000364774
  ensembl transcript: ENST00000375623
  gene symbol: DNMT3B
  hgvsc: ENST00000375623.4:c.922-49T>C
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000403169
  ensembl transcript: ENST00000443239
  gene symbol: DNMT3B
  hgvsc: ENST00000443239.3:c.1067-49T>C
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000337764
  ensembl transcript: ENST00000348286
  gene symbol: DNMT3B
  hgvsc: ENST00000348286.2:c.1193-49T>C
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000345105
  ensembl transcript: ENST00000344505
  gene symbol: DNMT3B
  hgvsc: ENST00000344505.4:c.1193-49T>C
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000412305
  ensembl transcript: ENST00000456297
  gene symbol: DNMT3B
  hgvsc: ENST00000456297.2:c.965-49T>C
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000313397
  ensembl transcript: ENST00000353855
  gene symbol: DNMT3B
  hgvsc: ENST00000353855.2:c.1193-49T>C
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000201963
  ensembl transcript: ENST00000201963
  gene symbol: DNMT3B
  hgvsc: ENST00000201963.3:c.1229-49T>C
  variant of: http://identifiers.org/hgnc/2979
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7167
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 947
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1130
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5087
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7371
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6222
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2700
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6395
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 806
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1948
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3602
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3441
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4896
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 943
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6487
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1402
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1811
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2480
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42212
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2901
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Other
population: East Asian
population: Latino
population: African
population: European (Finnish)
reference allele: T
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: MQ
site quality: DP

20-31383409-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31383409
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 31383409
    reference: chr 20
allele count: 1
allele frequency: 8.237503706876667e-6
allele num: 121396
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000201963
  ensembl transcript: ENST00000201963
  gene symbol: DNMT3B
  hgvsc: ENST00000201963.3:c.1229-47T>C
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000364774
  ensembl transcript: ENST00000375623
  gene symbol: DNMT3B
  hgvsc: ENST00000375623.4:c.922-47T>C
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000403169
  ensembl transcript: ENST00000443239
  gene symbol: DNMT3B
  hgvsc: ENST00000443239.3:c.1067-47T>C
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000345105
  ensembl transcript: ENST00000344505
  gene symbol: DNMT3B
  hgvsc: ENST00000344505.4:c.1193-47T>C
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000328547
  ensembl transcript: ENST00000328111
  gene symbol: DNMT3B
  hgvsc: ENST00000328111.2:c.1253-47T>C
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000412305
  ensembl transcript: ENST00000456297
  gene symbol: DNMT3B
  hgvsc: ENST00000456297.2:c.965-47T>C
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000313397
  ensembl transcript: ENST00000353855
  gene symbol: DNMT3B
  hgvsc: ENST00000353855.2:c.1193-47T>C
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000337764
  ensembl transcript: ENST00000348286
  gene symbol: DNMT3B
  hgvsc: ENST00000348286.2:c.1193-47T>C
  variant of: http://identifiers.org/hgnc/2979
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1130
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7168
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 943
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1402
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4896
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2700
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 806
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7371
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3455
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3601
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5075
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 955
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6394
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6487
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6218
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1948
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2903
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2495
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42207
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3689
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Latino
population: Other
population: South Asian
reference allele: T
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: MQ

20-31383413-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31383413
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 31383413
    reference: chr 20
allele count: 45
allele frequency: 3.707120967476192e-4
allele num: 121388
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000345105
  ensembl transcript: ENST00000344505
  gene symbol: DNMT3B
  hgvsc: ENST00000344505.4:c.1193-43C>T
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000201963
  ensembl transcript: ENST00000201963
  gene symbol: DNMT3B
  hgvsc: ENST00000201963.3:c.1229-43C>T
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000412305
  ensembl transcript: ENST00000456297
  gene symbol: DNMT3B
  hgvsc: ENST00000456297.2:c.965-43C>T
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000337764
  ensembl transcript: ENST00000348286
  gene symbol: DNMT3B
  hgvsc: ENST00000348286.2:c.1193-43C>T
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000313397
  ensembl transcript: ENST00000353855
  gene symbol: DNMT3B
  hgvsc: ENST00000353855.2:c.1193-43C>T
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000403169
  ensembl transcript: ENST00000443239
  gene symbol: DNMT3B
  hgvsc: ENST00000443239.3:c.1067-43C>T
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000364774
  ensembl transcript: ENST00000375623
  gene symbol: DNMT3B
  hgvsc: ENST00000375623.4:c.922-43C>T
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000328547
  ensembl transcript: ENST00000328111
  gene symbol: DNMT3B
  hgvsc: ENST00000328111.2:c.1253-43C>T
  variant of: http://identifiers.org/hgnc/2979
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 806
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5089
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7374
  bin: 4.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 3436
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6209
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7167
  bin: 4.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1948
  bin: 7.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2698
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 980
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6488
  bin: 9.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3602
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4896
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6397
  bin: 5.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1127
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 944
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1405
  bin: 7.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 1527
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1803
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3784
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: European (Non-Finnish)
population: East Asian
population: Other
population: South Asian
population: European (Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: FS
site quality: ClippingRankSum

20-31383414-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31383414
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 31383414
    reference: chr 20
allele count: 8
allele frequency: 6.590111537637774e-5
allele num: 121394
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000328547
  ensembl transcript: ENST00000328111
  gene symbol: DNMT3B
  hgvsc: ENST00000328111.2:c.1253-42G>A
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000313397
  ensembl transcript: ENST00000353855
  gene symbol: DNMT3B
  hgvsc: ENST00000353855.2:c.1193-42G>A
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000403169
  ensembl transcript: ENST00000443239
  gene symbol: DNMT3B
  hgvsc: ENST00000443239.3:c.1067-42G>A
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000345105
  ensembl transcript: ENST00000344505
  gene symbol: DNMT3B
  hgvsc: ENST00000344505.4:c.1193-42G>A
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000364774
  ensembl transcript: ENST00000375623
  gene symbol: DNMT3B
  hgvsc: ENST00000375623.4:c.922-42G>A
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000412305
  ensembl transcript: ENST00000456297
  gene symbol: DNMT3B
  hgvsc: ENST00000456297.2:c.965-42G>A
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000337764
  ensembl transcript: ENST00000348286
  gene symbol: DNMT3B
  hgvsc: ENST00000348286.2:c.1193-42G>A
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000201963
  ensembl transcript: ENST00000201963
  gene symbol: DNMT3B
  hgvsc: ENST00000201963.3:c.1229-42G>A
  variant of: http://identifiers.org/hgnc/2979
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1403
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6212
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6396
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4900
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1000
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3447
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5082
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7367
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7163
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1947
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6485
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3601
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2698
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 944
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1127
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 807
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2481
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1530
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42188
  bin: 9.75e1
  variant carriers: 8
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: South Asian
population: African
population: European (Finnish)
population: Other
population: East Asian
reference allele: G
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD

20-31383420-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31383420
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 31383420
    reference: chr 20
allele count: 4
allele frequency: 3.295001482750667e-5
allele num: 121396
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000403169
  ensembl transcript: ENST00000443239
  gene symbol: DNMT3B
  hgvsc: ENST00000443239.3:c.1067-36C>T
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000345105
  ensembl transcript: ENST00000344505
  gene symbol: DNMT3B
  hgvsc: ENST00000344505.4:c.1193-36C>T
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000313397
  ensembl transcript: ENST00000353855
  gene symbol: DNMT3B
  hgvsc: ENST00000353855.2:c.1193-36C>T
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000412305
  ensembl transcript: ENST00000456297
  gene symbol: DNMT3B
  hgvsc: ENST00000456297.2:c.965-36C>T
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000328547
  ensembl transcript: ENST00000328111
  gene symbol: DNMT3B
  hgvsc: ENST00000328111.2:c.1253-36C>T
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000337764
  ensembl transcript: ENST00000348286
  gene symbol: DNMT3B
  hgvsc: ENST00000348286.2:c.1193-36C>T
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000364774
  ensembl transcript: ENST00000375623
  gene symbol: DNMT3B
  hgvsc: ENST00000375623.4:c.922-36C>T
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000201963
  ensembl transcript: ENST00000201963
  gene symbol: DNMT3B
  hgvsc: ENST00000201963.3:c.1229-36C>T
  variant of: http://identifiers.org/hgnc/2979
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7164
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4899
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 807
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1016
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6214
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5074
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3599
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7368
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2700
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1946
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6397
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6485
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1403
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 943
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1127
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3468
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2497
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3880
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1535
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42196
  bin: 9.75e1
  variant carriers: 4
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Other
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
reference allele: C
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum

20-31383425-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31383425
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 31383425
    reference: chr 20
allele count: 1
allele frequency: 8.238046594391538e-6
allele num: 121388
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000364774
  ensembl transcript: ENST00000375623
  gene symbol: DNMT3B
  hgvsc: ENST00000375623.4:c.922-31C>T
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000328547
  ensembl transcript: ENST00000328111
  gene symbol: DNMT3B
  hgvsc: ENST00000328111.2:c.1253-31C>T
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000345105
  ensembl transcript: ENST00000344505
  gene symbol: DNMT3B
  hgvsc: ENST00000344505.4:c.1193-31C>T
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000403169
  ensembl transcript: ENST00000443239
  gene symbol: DNMT3B
  hgvsc: ENST00000443239.3:c.1067-31C>T
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000412305
  ensembl transcript: ENST00000456297
  gene symbol: DNMT3B
  hgvsc: ENST00000456297.2:c.965-31C>T
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000313397
  ensembl transcript: ENST00000353855
  gene symbol: DNMT3B
  hgvsc: ENST00000353855.2:c.1193-31C>T
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000337764
  ensembl transcript: ENST00000348286
  gene symbol: DNMT3B
  hgvsc: ENST00000348286.2:c.1193-31C>T
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000201963
  ensembl transcript: ENST00000201963
  gene symbol: DNMT3B
  hgvsc: ENST00000201963.3:c.1229-31C>T
  variant of: http://identifiers.org/hgnc/2979
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4898
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6396
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7165
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3599
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1023
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1403
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1946
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2699
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3490
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5065
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7371
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6213
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6485
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 807
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 943
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1127
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3196
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1800
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2495
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: East Asian
population: Other
population: European (Finnish)
population: African
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum

20-31383428-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31383428
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 31383428
    reference: chr 20
allele count: 1
allele frequency: 8.238182327451271e-6
allele num: 121386
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000412305
  ensembl transcript: ENST00000456297
  gene symbol: DNMT3B
  hgvsc: ENST00000456297.2:c.965-28A>G
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000403169
  ensembl transcript: ENST00000443239
  gene symbol: DNMT3B
  hgvsc: ENST00000443239.3:c.1067-28A>G
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000364774
  ensembl transcript: ENST00000375623
  gene symbol: DNMT3B
  hgvsc: ENST00000375623.4:c.922-28A>G
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000201963
  ensembl transcript: ENST00000201963
  gene symbol: DNMT3B
  hgvsc: ENST00000201963.3:c.1229-28A>G
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000345105
  ensembl transcript: ENST00000344505
  gene symbol: DNMT3B
  hgvsc: ENST00000344505.4:c.1193-28A>G
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000337764
  ensembl transcript: ENST00000348286
  gene symbol: DNMT3B
  hgvsc: ENST00000348286.2:c.1193-28A>G
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000328547
  ensembl transcript: ENST00000328111
  gene symbol: DNMT3B
  hgvsc: ENST00000328111.2:c.1253-28A>G
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000313397
  ensembl transcript: ENST00000353855
  gene symbol: DNMT3B
  hgvsc: ENST00000353855.2:c.1193-28A>G
  variant of: http://identifiers.org/hgnc/2979
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3488
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 943
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2699
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3599
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6216
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5072
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1403
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7161
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4898
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6485
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1024
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6396
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 807
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1127
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7371
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1946
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: East Asian
reference allele: A
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: ClippingRankSum

20-31383436-CCTT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31383436
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 31383433
    reference: chr 20
allele count: 1
allele frequency: 8.240218860212928e-6
allele num: 121356
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000403169
  ensembl transcript: ENST00000443239
  gene symbol: DNMT3B
  hgvsc: ENST00000443239.3:c.1067-13_1067-11delCTT
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000412305
  ensembl transcript: ENST00000456297
  gene symbol: DNMT3B
  hgvsc: ENST00000456297.2:c.965-13_965-11delCTT
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000313397
  ensembl transcript: ENST00000353855
  gene symbol: DNMT3B
  hgvsc: ENST00000353855.2:c.1193-13_1193-11delCTT
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000364774
  ensembl transcript: ENST00000375623
  gene symbol: DNMT3B
  hgvsc: ENST00000375623.4:c.922-13_922-11delCTT
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000337764
  ensembl transcript: ENST00000348286
  gene symbol: DNMT3B
  hgvsc: ENST00000348286.2:c.1193-13_1193-11delCTT
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000345105
  ensembl transcript: ENST00000344505
  gene symbol: DNMT3B
  hgvsc: ENST00000344505.4:c.1193-13_1193-11delCTT
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000328547
  ensembl transcript: ENST00000328111
  gene symbol: DNMT3B
  hgvsc: ENST00000328111.2:c.1253-13_1253-11delCTT
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000201963
  ensembl transcript: ENST00000201963
  gene symbol: DNMT3B
  hgvsc: ENST00000201963.3:c.1229-13_1229-11delCTT
  variant of: http://identifiers.org/hgnc/2979
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6485
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7369
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5068
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4897
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3480
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7161
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1128
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3599
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1032
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1403
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 807
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1946
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2699
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6213
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 943
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6396
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2486
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: South Asian
population: European (Finnish)
population: Latino
population: Other
reference allele: CCTT
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: DP

20-31383437-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31383437
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 31383437
    reference: chr 20
allele count: 2
allele frequency: 1.648152421135907e-5
allele num: 121348
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000313397
  ensembl transcript: ENST00000353855
  gene symbol: DNMT3B
  hgvsc: ENST00000353855.2:c.1193-19C>T
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000337764
  ensembl transcript: ENST00000348286
  gene symbol: DNMT3B
  hgvsc: ENST00000348286.2:c.1193-19C>T
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000364774
  ensembl transcript: ENST00000375623
  gene symbol: DNMT3B
  hgvsc: ENST00000375623.4:c.922-19C>T
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000403169
  ensembl transcript: ENST00000443239
  gene symbol: DNMT3B
  hgvsc: ENST00000443239.3:c.1067-19C>T
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000328547
  ensembl transcript: ENST00000328111
  gene symbol: DNMT3B
  hgvsc: ENST00000328111.2:c.1253-19C>T
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000412305
  ensembl transcript: ENST00000456297
  gene symbol: DNMT3B
  hgvsc: ENST00000456297.2:c.965-19C>T
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000201963
  ensembl transcript: ENST00000201963
  gene symbol: DNMT3B
  hgvsc: ENST00000201963.3:c.1229-19C>T
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000345105
  ensembl transcript: ENST00000344505
  gene symbol: DNMT3B
  hgvsc: ENST00000344505.4:c.1193-19C>T
  variant of: http://identifiers.org/hgnc/2979
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6485
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5063
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 807
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6214
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1127
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1403
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6396
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4899
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 943
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1032
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1946
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3479
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2699
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7369
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3599
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7161
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2476
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2481
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3979
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: East Asian
population: South Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum

20-31383443-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31383443
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 31383443
    reference: chr 20
allele count: 2
allele frequency: 1.648559982854976e-5
allele num: 121318
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000345105
  ensembl transcript: ENST00000344505
  gene symbol: DNMT3B
  hgvsc: ENST00000344505.4:c.1193-13C>G
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000201963
  ensembl transcript: ENST00000201963
  gene symbol: DNMT3B
  hgvsc: ENST00000201963.3:c.1229-13C>G
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000337764
  ensembl transcript: ENST00000348286
  gene symbol: DNMT3B
  hgvsc: ENST00000348286.2:c.1193-13C>G
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000328547
  ensembl transcript: ENST00000328111
  gene symbol: DNMT3B
  hgvsc: ENST00000328111.2:c.1253-13C>G
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000412305
  ensembl transcript: ENST00000456297
  gene symbol: DNMT3B
  hgvsc: ENST00000456297.2:c.965-13C>G
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000403169
  ensembl transcript: ENST00000443239
  gene symbol: DNMT3B
  hgvsc: ENST00000443239.3:c.1067-13C>G
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000313397
  ensembl transcript: ENST00000353855
  gene symbol: DNMT3B
  hgvsc: ENST00000353855.2:c.1193-13C>G
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000364774
  ensembl transcript: ENST00000375623
  gene symbol: DNMT3B
  hgvsc: ENST00000375623.4:c.922-13C>G
  variant of: http://identifiers.org/hgnc/2979
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1946
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1037
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 807
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1127
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6209
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3463
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6485
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4898
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7159
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 943
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6397
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2699
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7370
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1403
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5055
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3600
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2473
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2471
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: Other
population: Latino
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ

20-31383453-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 31383453
    reference: chr 20
  end: Position
    type: ExactPosition
    position: 31383453
    reference: chr 20
allele count: 1
allele frequency: 8.247694769311978e-6
allele num: 121246
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000337764
  ensembl transcript: ENST00000348286
  gene symbol: DNMT3B
  hgvsc: ENST00000348286.2:c.1193-3T>C
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000345105
  ensembl transcript: ENST00000344505
  gene symbol: DNMT3B
  hgvsc: ENST00000344505.4:c.1193-3T>C
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000403169
  ensembl transcript: ENST00000443239
  gene symbol: DNMT3B
  hgvsc: ENST00000443239.3:c.1067-3T>C
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000201963
  ensembl transcript: ENST00000201963
  gene symbol: DNMT3B
  hgvsc: ENST00000201963.3:c.1229-3T>C
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000328547
  ensembl transcript: ENST00000328111
  gene symbol: DNMT3B
  hgvsc: ENST00000328111.2:c.1253-3T>C
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000313397
  ensembl transcript: ENST00000353855
  gene symbol: DNMT3B
  hgvsc: ENST00000353855.2:c.1193-3T>C
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000412305
  ensembl transcript: ENST00000456297
  gene symbol: DNMT3B
  hgvsc: ENST00000456297.2:c.965-3T>C
  variant of: http://identifiers.org/hgnc/2979
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000088305
  ensembl protein: ENSP00000364774
  ensembl transcript: ENST00000375623
  gene symbol: DNMT3B
  hgvsc: ENST00000375623.4:c.922-3T>C
  variant of: http://identifiers.org/hgnc/2979
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1947
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1127
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1003
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3600
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5040
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4896
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3422
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6485
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6396
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6209
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7158
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7370
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 943
  bin: 8.75e1
  variant carriers: 0
hgvs: c.1253-3T>C
num of homozygotes: 0
reference allele: T

GenotypeQuality
all individuals: 886
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2563
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1190
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 592
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 295
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1137
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7872
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13425
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 25441
bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11508
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16452
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66398
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10362
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.158480074142725e-4
allele num: 8632
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.79e-1

FS
type: SiteQuality
SIO_000300: 1.0005e1

MQRankSum
type: SiteQuality
SIO_000300: 5.21e-1

QD
type: SiteQuality
SIO_000300: 1.771e1

BaseQRankSum
type: SiteQuality
SIO_000300: -8.0e-2

MQ
type: SiteQuality
SIO_000300: 6.055e1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.48e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.09e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

DP
type: SiteQuality
SIO_000300: 2.297325e6

GenotypeQuality
all individuals: 1185
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3324
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 83
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 782
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2932
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2894
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13412
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1994
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16727
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 680
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1964
bin: 4.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10336
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6582
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11452
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16386
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.161710037174721e-4
allele num: 8608
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66084
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.39e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.75e-1

DP
type: SiteQuality
SIO_000300: 2.218014e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 4.6e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.53e-1

QD
type: SiteQuality
SIO_000300: 1.179e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -9.71e-1

GenotypeQuality
all individuals: 116
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 758
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 284
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1181
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2566
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3133
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13413
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1845
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4855
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2638
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1942
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1994
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10316
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.349624060150376e-4
allele num: 8512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6560
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16338
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11418
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65748
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 9.67e0

VQSLOD
type: SiteQuality
SIO_000300: 5.39e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.01e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.57e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.22e-1

FS
type: SiteQuality
SIO_000300: 4.025e0

DP
type: SiteQuality
SIO_000300: 2.188228e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 4.85e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 3132
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2000
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 574
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13412
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1853
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1447
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2555
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 121
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2649
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1943
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10925
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4922
bin: 4.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65758
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.755034144633164e-5
allele num: 11422
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16342
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8526
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6562
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10312
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 1.69e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.47e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.85e0

MQRankSum
type: SiteQuality
SIO_000300: 6.43e-1

QD
type: SiteQuality
SIO_000300: 1.383e1

DP
type: SiteQuality
SIO_000300: 2.188057e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -1.13e-1

GenotypeQuality
all individuals: 1179
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 267
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 427
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 128
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1432
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4914
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11258
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4065
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 777
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1986
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1942
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2575
bin: 4.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8508
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65700
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10308
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6556
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11406
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16332
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.108647450110865e-3
allele num: 902
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.291e1

DP
type: SiteQuality
SIO_000300: 2.188186e6

MQRankSum
type: SiteQuality
SIO_000300: 9.03e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.48e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.498e0

FS
type: SiteQuality
SIO_000300: 1.2087e1

VQSLOD
type: SiteQuality
SIO_000300: -1.829e0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.85e-1

MQ
type: SiteQuality
SIO_000300: 5.983e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-3

GenotypeQuality
all individuals: 39
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1652
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 122
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 48233
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 130
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1395
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 223
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1588
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2308
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1483
bin: 6.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.017683626048645e-5
allele num: 66276
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16450
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10228
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11532
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.4e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.02e-1

DP
type: SiteQuality
SIO_000300: 3.604236e6

VQSLOD
type: SiteQuality
SIO_000300: 8.51e-1

FS
type: SiteQuality
SIO_000300: 1.586e0

QD
type: SiteQuality
SIO_000300: 1.065e1

MQRankSum
type: SiteQuality
SIO_000300: -3.79e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.246e0

MQ
type: SiteQuality
SIO_000300: 5.95e1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.38e-1

GenotypeQuality
all individuals: 1937
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2307
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 129
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1490
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48231
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 35
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1590
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1651
bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.508887346470713e-5
allele num: 66274
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16448
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10230
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11530
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.25e-1

MQRankSum
type: SiteQuality
SIO_000300: -7.76e-1

QD
type: SiteQuality
SIO_000300: 1.453e1

VQSLOD
type: SiteQuality
SIO_000300: 5.29e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.12e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.182e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.4e-3

DP
type: SiteQuality
SIO_000300: 3.604205e6

FS
type: SiteQuality
SIO_000300: 3.061e0

GenotypeQuality
all individuals: 33
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 268
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1588
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 133
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1656
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1404
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1188
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1934
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48224
bin: 9.75e1
variant carriers: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11534
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16448
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8628
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.508614187007815e-5
allele num: 66286
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10234
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.92e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.06e0

MQ
type: SiteQuality
SIO_000300: 5.942e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.8e-3

FS
type: SiteQuality
SIO_000300: 3.677e0

MQRankSum
type: SiteQuality
SIO_000300: 2.03e-1

DP
type: SiteQuality
SIO_000300: 3.604523e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.71e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.16e-1

QD
type: SiteQuality
SIO_000300: 1.184e1

GenotypeQuality
all individuals: 45
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 128
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1937
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 291
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1654
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2306
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1414
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 95
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48226
bin: 9.75e1
variant carriers: 33

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8628
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 33
allele frequency: 4.978577032164625e-4
allele num: 66284
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10232
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11536
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16450
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.952e1

QD
type: SiteQuality
SIO_000300: 1.34e1

DP
type: SiteQuality
SIO_000300: 3.605041e6

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 3.66e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.54e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.7e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.42e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -3.08e-1

GenotypeQuality
all individuals: 13
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 118
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 80
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 311
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1620
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1942
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48222
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1589
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2308
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.508432135638218e-5
allele num: 66294
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16450
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11538
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10232
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8628
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 8.58e-1

DP
type: SiteQuality
SIO_000300: 3.604919e6

VQSLOD
type: SiteQuality
SIO_000300: 7.18e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.5e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.94e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.188e0

FS
type: SiteQuality
SIO_000300: 1.987e0

QD
type: SiteQuality
SIO_000300: 9.869999999999999e0

MQ
type: SiteQuality
SIO_000300: 5.958e1

GenotypeQuality
all individuals: 16
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 124
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1588
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 310
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48224
bin: 9.75e1
variant carriers: 24

GenotypeQuality
all individuals: 23
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1941
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1629
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1195
bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11538
num of homozygotes: 0

South Asian
type: Population
allele count: 24
allele frequency: 1.458611887686885e-3
allele num: 16454
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8628
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10234
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66300
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 3.605249e6

FS
type: SiteQuality
SIO_000300: 1.132e0

VQSLOD
type: SiteQuality
SIO_000300: 3.19e0

BaseQRankSum
type: SiteQuality
SIO_000300: -6.5e-2

MQRankSum
type: SiteQuality
SIO_000300: 2.04e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 7.5e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.72e-1

MQ
type: SiteQuality
SIO_000300: 5.968e1

QD
type: SiteQuality
SIO_000300: 1.151e1

GenotypeQuality
all individuals: 25
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 313
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48216
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 16
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1646
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 120
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1946
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1658
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2308
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1195
bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.773260359655981e-5
allele num: 10232
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16458
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11538
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.016955288722621e-5
allele num: 66292
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.924e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.58e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.44e0

FS
type: SiteQuality
SIO_000300: 6.877e0

MQRankSum
type: SiteQuality
SIO_000300: 1.57e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.44e-1

QD
type: SiteQuality
SIO_000300: 1.269e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

VQSLOD
type: SiteQuality
SIO_000300: 1.14e0

DP
type: SiteQuality
SIO_000300: 3.605083e6

GenotypeQuality
all individuals: 2308
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 48216
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1947
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1590
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 114
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 310
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1665
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1430
bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.761811792268645e-5
allele num: 10244
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11534
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16460
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8628
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66316
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 3.605382e6

VQSLOD
type: SiteQuality
SIO_000300: 1.53e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.599999999999999e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -2.871e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

FS
type: SiteQuality
SIO_000300: 2.825e0

MQRankSum
type: SiteQuality
SIO_000300: 4.1e-1

QD
type: SiteQuality
SIO_000300: 9.93e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.54e-1

GenotypeQuality
all individuals: 1663
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1593
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48214
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1855
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 213
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1198
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1440
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2313
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66462
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10302
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16474
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.658008658008658e-5
allele num: 11550
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.16e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

DP
type: SiteQuality
SIO_000300: 3.608321e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.51e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.703e0

QD
type: SiteQuality
SIO_000300: 2.565e1

FS
type: SiteQuality
SIO_000300: 1.89e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 2.48e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.92e-1

GenotypeQuality
all individuals: 45
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 160
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1461
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1593
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1660
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 4.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10322
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.50253929140247e-5
allele num: 66554
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16482
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.376e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

FS
type: SiteQuality
SIO_000300: 3.354e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.2e0

MQ
type: SiteQuality
SIO_000300: 5.973e1

DP
type: SiteQuality
SIO_000300: 3.60993e6

MQRankSum
type: SiteQuality
SIO_000300: 1.09e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.72e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.37e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.0e-1

GenotypeQuality
all individuals: 1956
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1661
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1993
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1467
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 48213
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 2314
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1202
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 151
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 2.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.674922600619196e-5
allele num: 10336
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 4
allele frequency: 2.426595486532395e-4
allele num: 16484
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66568
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.26e-1

MQRankSum
type: SiteQuality
SIO_000300: -4.57e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

DP
type: SiteQuality
SIO_000300: 3.610701e6

MQ
type: SiteQuality
SIO_000300: 5.952e1

QD
type: SiteQuality
SIO_000300: 1.087e1

BaseQRankSum
type: SiteQuality
SIO_000300: 9.12e-1

FS
type: SiteQuality
SIO_000300: 5.610000000000001e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.53e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.86e-1

GenotypeQuality
all individuals: 1595
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2314
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1955
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variant carriers: 0

GenotypeQuality
all individuals: 0
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variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1468
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variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
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GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2007
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48213
bin: 9.75e1
variant carriers: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10342
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66578
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.065752759917505e-5
allele num: 16486
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.52e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.1e0

QD
type: SiteQuality
SIO_000300: 1.304e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

DP
type: SiteQuality
SIO_000300: 3.610612e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.72e0

MQRankSum
type: SiteQuality
SIO_000300: 7.79e-1

MQ
type: SiteQuality
SIO_000300: 5.964e1

VQSLOD
type: SiteQuality
SIO_000300: 5.0e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
all individuals: 48217
bin: 9.75e1
variant carriers: 64

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 1.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 50
allele frequency: 7.507056633235241e-4
allele num: 66604
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 4
allele frequency: 3.459609064175748e-4
allele num: 11562
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

South Asian
type: Population
allele count: 8
allele frequency: 4.852602207934004e-4
allele num: 16486
num of homozygotes: 0

African
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allele count: 2
allele frequency: 1.932740626207963e-4
allele num: 10348
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 3.611894e6

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.968e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.61e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 7.15e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.4e-2

VQSLOD
type: SiteQuality
SIO_000300: 5.35e0

QD
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SIO_000300: 1.286e1

MQRankSum
type: SiteQuality
SIO_000300: 4.5e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.1e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1665
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GenotypeQuality
all individuals: 118
bin: 2.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16492
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10350
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.501185936890143e-5
allele num: 66614
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.292e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.28e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -6.32e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.34e-1

FS
type: SiteQuality
SIO_000300: 1.883e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.295e0

DP
type: SiteQuality
SIO_000300: 3.610399e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.8e-2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 8
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variant carriers: 0

GenotypeQuality
all individuals: 48202
bin: 9.75e1
variant carriers: 1

Latino
type: Population
allele count: 1
allele frequency: 8.64902266043937e-5
allele num: 11562
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16492
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10350
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66614
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 3.610399e6

FS
type: SiteQuality
SIO_000300: 1.883e0

VQSLOD
type: SiteQuality
SIO_000300: 8.34e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.8e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

QD
type: SiteQuality
SIO_000300: 1.292e1

MQRankSum
type: SiteQuality
SIO_000300: -6.32e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.295e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.28e-1

GenotypeQuality
all individuals: 23
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variant carriers: 0

GenotypeQuality
all individuals: 7
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variant carriers: 0

GenotypeQuality
all individuals: 10
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1596
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GenotypeQuality
all individuals: 15
bin: 4.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10354
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.501095799933952e-5
allele num: 66618
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16494
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 3.610516e6

MQ
type: SiteQuality
SIO_000300: 5.93e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.88e-1

FS
type: SiteQuality
SIO_000300: 5.215e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -5.927e0

MQRankSum
type: SiteQuality
SIO_000300: 8.01e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.21e-1

QD
type: SiteQuality
SIO_000300: 1.099e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.51e-1

GenotypeQuality
all individuals: 0
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 22
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 958

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1660
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GenotypeQuality
all individuals: 2067
bin: 6.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 727
allele frequency: 1.091067355024613e-2
allele num: 66632
num of homozygotes: 2

European (Finnish)
type: Population
allele count: 73
allele frequency: 1.103719383126701e-2
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 68
allele frequency: 5.88031822898651e-3
allele num: 11564
num of homozygotes: 1

African
type: Population
allele count: 22
allele frequency: 2.122732535700502e-3
allele num: 10364
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

South Asian
type: Population
allele count: 65
allele frequency: 3.940349175557711e-3
allele num: 16496
num of homozygotes: 1

Other
type: Population
allele count: 7
allele frequency: 7.72626931567329e-3
allele num: 906
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.5e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -3.682e0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.42e1

MQRankSum
type: SiteQuality
SIO_000300: 1.85e-1

MQ
type: SiteQuality
SIO_000300: 5.969e1

VQSLOD
type: SiteQuality
SIO_000300: 6.4e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.78e-1

DP
type: SiteQuality
SIO_000300: 3.626596e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.600000000000001e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 74
bin: 2.25e1
variant carriers: 0

Latino
type: Population
allele count: 4
allele frequency: 3.457814661134163e-4
allele num: 11568
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16498
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10378
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66658
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.44e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.96e0

VQSLOD
type: SiteQuality
SIO_000300: 9.97e-1

FS
type: SiteQuality
SIO_000300: 3.029e0

MQ
type: SiteQuality
SIO_000300: 5.95e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.42e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.23e-1

DP
type: SiteQuality
SIO_000300: 3.599875e6

QD
type: SiteQuality
SIO_000300: 1.376e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1979
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GenotypeQuality
all individuals: 4
bin: 4.25e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.644536652835408e-5
allele num: 11568
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10378
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66666
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South Asian
type: Population
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allele frequency: 0.0e0
allele num: 16498
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.39e-1

ReadPosRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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FS
type: SiteQuality
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VQSLOD
type: SiteQuality
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DP
type: SiteQuality
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MQRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 1.03e-2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10380
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16498
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499610101373643e-5
allele num: 66684
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 3.59996e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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FS
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: 9.2e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -2.23e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.26e0

QD
type: SiteQuality
SIO_000300: 1.351e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48091
bin: 9.75e1
variant carriers: 2

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1614
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 4.75e1
variant carriers: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.211827435773146e-4
allele num: 16504
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66696
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10380
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.06e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.233e0

FS
type: SiteQuality
SIO_000300: 1.767e0

MQ
type: SiteQuality
SIO_000300: 5.956e1

VQSLOD
type: SiteQuality
SIO_000300: 7.71e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.56e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.64e-1

QD
type: SiteQuality
SIO_000300: 1.067e1

DP
type: SiteQuality
SIO_000300: 3.600456e6

GenotypeQuality
all individuals: 43
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1500
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1701
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 3.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66704
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10386
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.156336725254394e-4
allele num: 8648
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -3.384e-1

DP
type: SiteQuality
SIO_000300: 3.600282e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.56e-1

MQRankSum
type: SiteQuality
SIO_000300: -7.199999999999999e-2

QD
type: SiteQuality
SIO_000300: 1.888e1

MQ
type: SiteQuality
SIO_000300: 5.958e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.022e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.61e-1

FS
type: SiteQuality
SIO_000300: 1.612e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2334
bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 48087
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variant carriers: 3

GenotypeQuality
all individuals: 1985
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variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1612
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10388
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.49707690001499e-5
allele num: 66710
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 3.600308e6

FS
type: SiteQuality
SIO_000300: 4.965e0

MQ
type: SiteQuality
SIO_000300: 5.971e1

MQRankSum
type: SiteQuality
SIO_000300: -3.23e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -1.174e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.133e0

QD
type: SiteQuality
SIO_000300: 1.975e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.51e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.88e0

GenotypeQuality
all individuals: 11
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1217
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 3

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1984
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1613
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.496942079386017e-5
allele num: 66712
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10390
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.971e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -3.746e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.29e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.55e0

QD
type: SiteQuality
SIO_000300: 3.404e1

MQRankSum
type: SiteQuality
SIO_000300: 9.84e-1

VQSLOD
type: SiteQuality
SIO_000300: -3.821e0

FS
type: SiteQuality
SIO_000300: 4.146e0

DP
type: SiteQuality
SIO_000300: 3.600359e6

GenotypeQuality
all individuals: 46
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 18
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2095
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 3
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variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 4.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.997871511227029e-5
allele num: 66714
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.51e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

DP
type: SiteQuality
SIO_000300: 3.600164e6

QD
type: SiteQuality
SIO_000300: 1.212e1

MQRankSum
type: SiteQuality
SIO_000300: 2.77e-1

FS
type: SiteQuality
SIO_000300: 4.11e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.327e0

MQ
type: SiteQuality
SIO_000300: 5.96e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.57e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.66e0

GenotypeQuality
all individuals: 30
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 4.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 46
bin: 5.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66714
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.923446816695518e-4
allele num: 10398
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.212e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.57e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.77e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

FS
type: SiteQuality
SIO_000300: 4.11e-1

MQ
type: SiteQuality
SIO_000300: 5.96e1

DP
type: SiteQuality
SIO_000300: 3.600164e6

ClippingRankSum
type: SiteQuality
SIO_000300: -3.51e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.66e0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1987
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66712
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.641548565502938e-5
allele num: 11572
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 6.74e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.779e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -1.032e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.92e0

FS
type: SiteQuality
SIO_000300: 4.855e0

QD
type: SiteQuality
SIO_000300: 6.85e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.96e0

DP
type: SiteQuality
SIO_000300: 3.600092e6

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 14
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GenotypeQuality
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variant carriers: 3

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2156
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variant carriers: 0

GenotypeQuality
all individuals: 1694
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 3
allele frequency: 2.885170225043277e-4
allele num: 10398
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66718
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.07e-1

ClippingRankSum
type: SiteQuality
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QD
type: SiteQuality
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BaseQRankSum
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MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 1.241e0

VQSLOD
type: SiteQuality
SIO_000300: 1.5e0

MQRankSum
type: SiteQuality
SIO_000300: -7.2e-1

DP
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

GenotypeQuality
all individuals: 18
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1991
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variant carriers: 0

GenotypeQuality
all individuals: 14
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variant carriers: 0

GenotypeQuality
all individuals: 1206
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variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 3.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.997242536866083e-5
allele num: 66728
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 3.599487e6

BaseQRankSum
type: SiteQuality
SIO_000300: 6.71e-1

MQ
type: SiteQuality
SIO_000300: 5.977e1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.29e-1

FS
type: SiteQuality
SIO_000300: 1.2235e1

VQSLOD
type: SiteQuality
SIO_000300: -1.702e0

QD
type: SiteQuality
SIO_000300: 1.317e1

MQRankSum
type: SiteQuality
SIO_000300: -8.03e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.24e0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
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GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1202
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GenotypeQuality
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bin: 9.75e1
variant carriers: 3

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.817080557238038e-4
allele num: 16510
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66724
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.26e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.184e0

VQSLOD
type: SiteQuality
SIO_000300: 2.19e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 6.0e-2

QD
type: SiteQuality
SIO_000300: 1.177e1

MQ
type: SiteQuality
SIO_000300: 5.991e1

MQRankSum
type: SiteQuality
SIO_000300: 7.8e-1

FS
type: SiteQuality
SIO_000300: 1.106e0

DP
type: SiteQuality
SIO_000300: 3.599631e6

GenotypeQuality
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bin: 9.75e1
variant carriers: 6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.511944360447536e-4
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.101321585903084e-3
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 5.994305409860632e-5
allele num: 66730
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -5.11e-1

DP
type: SiteQuality
SIO_000300: 3.59947e6

VQSLOD
type: SiteQuality
SIO_000300: 1.49e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.23e0

FS
type: SiteQuality
SIO_000300: 5.896e0

MQRankSum
type: SiteQuality
SIO_000300: 5.93e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.441e0

QD
type: SiteQuality
SIO_000300: 1.405e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 2.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66732
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.1e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 8.24e-1

FS
type: SiteQuality
SIO_000300: 1.5115e1

QD
type: SiteQuality
SIO_000300: 1.336e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.01e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.19e0

MQ
type: SiteQuality
SIO_000300: 5.918e1

DP
type: SiteQuality
SIO_000300: 3.599023e6

VQSLOD
type: SiteQuality
SIO_000300: -2.788e0

GenotypeQuality
all individuals: 21
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 1

GenotypeQuality
all individuals: 18
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1970
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2106
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variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 11
allele frequency: 1.648335181466719e-4
allele num: 66734
num of homozygotes: 0

Other
type: Population
allele count: 3
allele frequency: 3.303964757709251e-3
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.511944360447536e-4
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 1047
allele frequency: 6.340843023255814e-2
allele num: 16512
num of homozygotes: 40

Latino
type: Population
allele count: 16
allele frequency: 1.38217000691085e-3
allele num: 11576
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.615384615384615e-5
allele num: 10400
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 4.05e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.43e-1

MQ
type: SiteQuality
SIO_000300: 5.973e1

FS
type: SiteQuality
SIO_000300: 5.24e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.89e0

MQRankSum
type: SiteQuality
SIO_000300: 2.67e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.9e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.27e-2

QD
type: SiteQuality
SIO_000300: 1.429e1

DP
type: SiteQuality
SIO_000300: 3.650412e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 48034
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variant carriers: 15

GenotypeQuality
all individuals: 1219
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 14
allele frequency: 2.097944014865432e-4
allele num: 66732
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.511944360447536e-4
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.497e1

DP
type: SiteQuality
SIO_000300: 3.614146e6

MQ
type: SiteQuality
SIO_000300: 5.982e1

VQSLOD
type: SiteQuality
SIO_000300: 5.11e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.95e0

MQRankSum
type: SiteQuality
SIO_000300: 2.07e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.79e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.620000000000001e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 21

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 21
allele frequency: 2.427184466019417e-3
allele num: 8652
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66730
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.161e1

FS
type: SiteQuality
SIO_000300: 1.102e0

ReadPosRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 3.613925e6

MQRankSum
type: SiteQuality
SIO_000300: -1.7e-2

VQSLOD
type: SiteQuality
SIO_000300: 3.69e0

MQ
type: SiteQuality
SIO_000300: 5.986e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66736
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
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allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.284e0

MQ
type: SiteQuality
SIO_000300: 5.917e1

VQSLOD
type: SiteQuality
SIO_000300: 6.54e-1

ReadPosRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

DP
type: SiteQuality
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MQRankSum
type: SiteQuality
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QD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: 3.2e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 23

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1472
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GenotypeQuality
all individuals: 16
bin: 2.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

African
type: Population
allele count: 18
allele frequency: 1.731102135025967e-3
allele num: 10398
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 5.994125756758376e-5
allele num: 66732
num of homozygotes: 0

FS
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.302e1

InbreedingCoeff
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.952e1

VQSLOD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -1.24e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.38e-1

DP
type: SiteQuality
SIO_000300: 3.613972e6

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1607
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1988
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48043
bin: 9.75e1
variant carriers: 35

GenotypeQuality
all individuals: 30
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2324
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 3.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 18
allele frequency: 2.697518283179475e-4
allele num: 66728
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 10
allele frequency: 9.613535858488752e-4
allele num: 10402
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 4
allele frequency: 3.455425017277125e-4
allele num: 11576
num of homozygotes: 0

Other
type: Population
allele count: 3
allele frequency: 3.303964757709251e-3
allele num: 908
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.294e1

VQSLOD
type: SiteQuality
SIO_000300: 5.56e0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.63e0

MQRankSum
type: SiteQuality
SIO_000300: 2.58e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.53e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.2e-1

DP
type: SiteQuality
SIO_000300: 3.61385e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.83e-2

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1998
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48040
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1691
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2322
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2088
bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498576352465158e-5
allele num: 66730
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.966e1

DP
type: SiteQuality
SIO_000300: 3.613445e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.66e0

QD
type: SiteQuality
SIO_000300: 1.551e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -1.274e-1

MQRankSum
type: SiteQuality
SIO_000300: 8.74e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.99e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.807e0

GenotypeQuality
all individuals: 2321
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1605
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2176
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48040
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1996
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 4.25e1
variant carriers: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.311604253351826e-4
allele num: 8652
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66732
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.005e1

DP
type: SiteQuality
SIO_000300: 3.613469e6

ClippingRankSum
type: SiteQuality
SIO_000300: 2.5e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.88e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

FS
type: SiteQuality
SIO_000300: 7.2e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.423e0

MQ
type: SiteQuality
SIO_000300: 5.948e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.45e-1

GenotypeQuality
all individuals: 18
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1605
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2322
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1999
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1491
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1685
bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66732
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.311604253351826e-4
allele num: 8652
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.336e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -7.199999999999999e-2

VQSLOD
type: SiteQuality
SIO_000300: 5.47e-1

DP
type: SiteQuality
SIO_000300: 3.613366e6

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.8e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

QD
type: SiteQuality
SIO_000300: 1.135e1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.110000000000001e-1

GenotypeQuality
all individuals: 18
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1207
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2321
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48047
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 13
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1490
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2008
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2135
bin: 6.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66736
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.25e0

BaseQRankSum
type: SiteQuality
SIO_000300: 6.2e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.99e-1

QD
type: SiteQuality
SIO_000300: 1.383e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 6.13e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.63e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.966e1

DP
type: SiteQuality
SIO_000300: 3.613208e6

GenotypeQuality
all individuals: 12
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2129
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1483
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1208
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2321
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1601
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2007
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48049
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 34
bin: 4.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498441620714457e-5
allele num: 66736
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -5.96e-1

FS
type: SiteQuality
SIO_000300: 1.189e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.884e1

DP
type: SiteQuality
SIO_000300: 3.613144e6

ClippingRankSum
type: SiteQuality
SIO_000300: 9.21e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.82e0

QD
type: SiteQuality
SIO_000300: 1.541e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.9e-1

VQSLOD
type: SiteQuality
SIO_000300: -8.642e-1

GenotypeQuality
all individuals: 2003
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1218
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2320
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 48053
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1698
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1469
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1603
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66734
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.611687812379854e-5
allele num: 10404
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -4.25e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.71e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -2.039e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.193e0

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 3.61343e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

QD
type: SiteQuality
SIO_000300: 2.374e1

GenotypeQuality
all individuals: 2138
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1496
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2325
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48056
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1220
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1603
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1708
bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66736
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 4.18e-1

FS
type: SiteQuality
SIO_000300: 3.749e0

QD
type: SiteQuality
SIO_000300: 1.417e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.59e0

MQRankSum
type: SiteQuality
SIO_000300: -1.037e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.8e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.5e-1

DP
type: SiteQuality
SIO_000300: 3.613561e6

GenotypeQuality
all individuals: 55
bin: 5.25e1
variant carriers: 24

GenotypeQuality
all individuals: 34
bin: 4.75e1
variant carriers: 17

GenotypeQuality
all individuals: 15
bin: 2.5e0
variant carriers: 4

GenotypeQuality
all individuals: 18
bin: 3.25e1
variant carriers: 6

GenotypeQuality
all individuals: 544
bin: 6.75e1
variant carriers: 61

GenotypeQuality
all individuals: 43
bin: 4.25e1
variant carriers: 21

GenotypeQuality
all individuals: 13
bin: 2.75e1
variant carriers: 6

GenotypeQuality
all individuals: 8
bin: 1.25e1
variant carriers: 3

GenotypeQuality
all individuals: 55682
bin: 9.75e1
variant carriers: 41781

GenotypeQuality
all individuals: 6
bin: 7.5e0
variant carriers: 2

GenotypeQuality
all individuals: 641
bin: 7.75e1
variant carriers: 104

GenotypeQuality
all individuals: 643
bin: 8.75e1
variant carriers: 120

East Asian
type: Population
allele count: 7967
allele frequency: 9.210404624277456e-1
allele num: 8650
num of homozygotes: 3677

African
type: Population
allele count: 4753
allele frequency: 4.570192307692308e-1
allele num: 10400
num of homozygotes: 1079

South Asian
type: Population
allele count: 9831
allele frequency: 5.955294402713835e-1
allele num: 16508
num of homozygotes: 2974

Other
type: Population
allele count: 387
allele frequency: 4.262114537444934e-1
allele num: 908
num of homozygotes: 87

European (Non-Finnish)
type: Population
allele count: 25130
allele frequency: 3.767729167291373e-1
allele num: 66698
num of homozygotes: 4779

Latino
type: Population
allele count: 8069
allele frequency: 6.981311645613428e-1
allele num: 11558
num of homozygotes: 2909

European (Finnish)
type: Population
allele count: 2532
allele frequency: 3.832879200726612e-1
allele num: 6606
num of homozygotes: 482

QD
type: SiteQuality
SIO_000300: 2.165e1

InbreedingCoeff
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ClippingRankSum
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FS
type: SiteQuality
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BaseQRankSum
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MQ
type: SiteQuality
SIO_000300: 5.966e1

VQSLOD
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ReadPosRankSum
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SIO_000300: 3.76e-1

DP
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MQRankSum
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 66738
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
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allele num: 16512
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ClippingRankSum
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InbreedingCoeff
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MQRankSum
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DP
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FS
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VQSLOD
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BaseQRankSum
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MQ
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QD
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele frequency: 9.611687812379854e-5
allele num: 10404
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
allele num: 16512
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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Other
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num of homozygotes: 0

InbreedingCoeff
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MQ
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FS
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ReadPosRankSum
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MQRankSum
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DP
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BaseQRankSum
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VQSLOD
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ClippingRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 4.495729057395475e-5
allele num: 66730
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

DP
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MQ
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QD
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FS
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ReadPosRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -1.524e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.26e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.56e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66738
num of homozygotes: 0

African
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allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

MQRankSum
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SIO_000300: -3.23e-1

InbreedingCoeff
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ClippingRankSum
type: SiteQuality
SIO_000300: 1.67e-1

ReadPosRankSum
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SIO_000300: -2.94e-1

VQSLOD
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QD
type: SiteQuality
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FS
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 3.800239e6

BaseQRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.023e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66736
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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South Asian
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allele frequency: 3.634161114476075e-4
allele num: 16510
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East Asian
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

FS
type: SiteQuality
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MQ
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BaseQRankSum
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ReadPosRankSum
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InbreedingCoeff
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ClippingRankSum
type: SiteQuality
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VQSLOD
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QD
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MQRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 9
allele frequency: 1.348637875745497e-4
allele num: 66734
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

InbreedingCoeff
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SIO_000300: -1.0e-4

DP
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MQ
type: SiteQuality
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MQRankSum
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BaseQRankSum
type: SiteQuality
SIO_000300: -7.29e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 9.1e-2

VQSLOD
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ReadPosRankSum
type: SiteQuality
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FS
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.456e1

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.498441620714457e-5
allele num: 66736
num of homozygotes: 0

East Asian
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Other
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South Asian
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allele count: 0
allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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African
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European (Finnish)
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MQRankSum
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ReadPosRankSum
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ClippingRankSum
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MQ
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VQSLOD
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QD
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FS
type: SiteQuality
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BaseQRankSum
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DP
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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num of homozygotes: 0

Latino
type: Population
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European (Non-Finnish)
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South Asian
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African
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East Asian
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European (Finnish)
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allele count: 3
allele frequency: 4.535833081342606e-4
allele num: 6614
num of homozygotes: 0

VQSLOD
type: SiteQuality
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QD
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DP
type: SiteQuality
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FS
type: SiteQuality
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ClippingRankSum
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MQRankSum
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MQ
type: SiteQuality
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BaseQRankSum
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InbreedingCoeff
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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South Asian
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allele num: 16510
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European (Finnish)
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allele frequency: 0.0e0
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East Asian
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 10404
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European (Non-Finnish)
type: Population
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allele frequency: 0.0e0
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Other
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BaseQRankSum
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DP
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InbreedingCoeff
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ReadPosRankSum
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FS
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ClippingRankSum
type: SiteQuality
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QD
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MQ
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SIO_000300: 5.932e1

MQRankSum
type: SiteQuality
SIO_000300: 6.47e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.4e-2

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3618
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 95
bin: 4.75e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056935190793458e-5
allele num: 16510
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66728
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 5.82e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.49e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 8.27e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.57e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.17e0

FS
type: SiteQuality
SIO_000300: 8.61e-1

QD
type: SiteQuality
SIO_000300: 1.178e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 3.483363e6

GenotypeQuality
all individuals: 2482
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3191
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66728
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056935190793458e-5
allele num: 16510
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.1429e1

MQRankSum
type: SiteQuality
SIO_000300: -8.41e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 3.91e0

DP
type: SiteQuality
SIO_000300: 3.483246e6

VQSLOD
type: SiteQuality
SIO_000300: -1.312e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.18e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.13e-1

QD
type: SiteQuality
SIO_000300: 1.745e1

MQ
type: SiteQuality
SIO_000300: 5.972e1

GenotypeQuality
all individuals: 31
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2471
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variant carriers: 0

GenotypeQuality
all individuals: 42201
bin: 9.75e1
variant carriers: 45

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

African
type: Population
allele count: 44
allele frequency: 4.229142637447136e-3
allele num: 10404
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498756032493031e-5
allele num: 66722
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.639999999999999e-1

DP
type: SiteQuality
SIO_000300: 3.48339e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 1.92e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.78e0

MQRankSum
type: SiteQuality
SIO_000300: 1.02e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.591e1

FS
type: SiteQuality
SIO_000300: 2.493e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.03e-1

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 59
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variant carriers: 0

GenotypeQuality
all individuals: 3836
bin: 6.25e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.638562543192812e-5
allele num: 11576
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66730
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

African
type: Population
allele count: 7
allele frequency: 6.726888333653661e-4
allele num: 10406
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.7e-1

MQ
type: SiteQuality
SIO_000300: 5.973e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.09e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

DP
type: SiteQuality
SIO_000300: 3.482723e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.610000000000001e-1

FS
type: SiteQuality
SIO_000300: 6.126e0

VQSLOD
type: SiteQuality
SIO_000300: 1.7e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.7e-1

QD
type: SiteQuality
SIO_000300: 1.452e1

GenotypeQuality
all individuals: 25
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2484
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 40
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variant carriers: 0

GenotypeQuality
all individuals: 14
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variant carriers: 0

GenotypeQuality
all individuals: 3195
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variant carriers: 0

GenotypeQuality
all individuals: 2918
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 4.75e1
variant carriers: 0

African
type: Population
allele count: 4
allele frequency: 3.844675124951942e-4
allele num: 10404
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66728
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 4.41e0

MQRankSum
type: SiteQuality
SIO_000300: -1.38e-1

QD
type: SiteQuality
SIO_000300: 1.439e1

VQSLOD
type: SiteQuality
SIO_000300: 1.72e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.5e-1

DP
type: SiteQuality
SIO_000300: 3.482897e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.513e0

MQ
type: SiteQuality
SIO_000300: 5.971e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 5.1e-1

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 24
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 9
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GenotypeQuality
all individuals: 1531
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variant carriers: 0

GenotypeQuality
all individuals: 23
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variant carriers: 0

GenotypeQuality
all individuals: 2487
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variant carriers: 0

GenotypeQuality
all individuals: 42197
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2921
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498711108446736e-5
allele num: 66724
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 7.357e0

QD
type: SiteQuality
SIO_000300: 1.513e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 4.48e-1

DP
type: SiteQuality
SIO_000300: 3.483013e6

BaseQRankSum
type: SiteQuality
SIO_000300: -4.855e0

MQRankSum
type: SiteQuality
SIO_000300: 2.22e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.97e-1

MQ
type: SiteQuality
SIO_000300: 5.97e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.0e-3

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 3197
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.611687812379854e-5
allele num: 10404
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66720
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.48e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.22e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.311e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.39e-1

FS
type: SiteQuality
SIO_000300: 1.199e0

DP
type: SiteQuality
SIO_000300: 3.483003e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.907e1

QD
type: SiteQuality
SIO_000300: 1.234e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.53e-1

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1535
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 42198
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
all individuals: 2477
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2921
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1802
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499160470136723e-5
allele num: 66704
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10390
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.139999999999999e-1

FS
type: SiteQuality
SIO_000300: 1.162e0

VQSLOD
type: SiteQuality
SIO_000300: 1.83e0

MQ
type: SiteQuality
SIO_000300: 5.624e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 1.41e-1

MQRankSum
type: SiteQuality
SIO_000300: -6.899999999999999e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.1e-2

QD
type: SiteQuality
SIO_000300: 1.736e1

DP
type: SiteQuality
SIO_000300: 3.482619e6

GenotypeQuality
all individuals: 12
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 2

GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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GenotypeQuality
all individuals: 2919
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1801
bin: 8.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10390
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.998590662388677e-5
allele num: 66698
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 3.482523e6

VQSLOD
type: SiteQuality
SIO_000300: 3.58e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

QD
type: SiteQuality
SIO_000300: 1.619e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.25e0

FS
type: SiteQuality
SIO_000300: 7.47e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.83e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.165e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.66e-1

GenotypeQuality
all individuals: 16
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2915
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3971
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1535
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42198
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 5
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1802
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3197
bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.21153380179307e-4
allele num: 16508
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10380
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11572
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66684
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 4.19e-1

FS
type: SiteQuality
SIO_000300: 3.435e0

QD
type: SiteQuality
SIO_000300: 1.286e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.647e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.04e0

MQRankSum
type: SiteQuality
SIO_000300: 2.07e-1

DP
type: SiteQuality
SIO_000300: 3.482067e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.77e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.928e1