X-129203388-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24129203388
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24129203388
    reference: chr 0
allele count: 1
allele frequency: 1.140055862737274e-5
allele num: 87715
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000102034
  ensembl protein: ENSP00000311280
  ensembl transcript: ENST00000308167
  gene symbol: ELF4
  hgvsc: ENST00000308167.5:c.1074C>T
  hgvsp: ENST00000308167.5:c.1074C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3319
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102034
  ensembl protein: ENSP00000338608
  ensembl transcript: ENST00000335997
  gene symbol: ELF4
  hgvsc: ENST00000335997.7:c.1074C>T
  hgvsp: ENST00000335997.7:c.1074C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3319
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1091
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 2436
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Leu358Leu
num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 1
  allele frequency: 2.085027418110548e-5
  allele num: 47961
  num of homozygotes: 0
population: Other
population: East Asian
population: South Asian
population: African
population: Latino
population: European (Finnish)
reference allele: G
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum

X-129203393-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24129203393
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24129203393
    reference: chr 0
allele count: 2
allele frequency: 2.280215708406015e-5
allele num: 87711
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102034
  ensembl protein: ENSP00000338608
  ensembl transcript: ENST00000335997
  gene symbol: ELF4
  hgvsc: ENST00000335997.7:c.1069G>A
  hgvsp: ENSP00000338608.7:p.Gly357Ser
  variant of: http://identifiers.org/hgnc/3319
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102034
  ensembl protein: ENSP00000311280
  ensembl transcript: ENST00000308167
  gene symbol: ELF4
  hgvsc: ENST00000308167.5:c.1069G>A
  hgvsp: ENSP00000311280.5:p.Gly357Ser
  variant of: http://identifiers.org/hgnc/3319
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1091
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
hgvs: p.Gly357Ser
num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 6634
  num of homozygotes: 0
population: Other
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Latino
reference allele: C
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: ClippingRankSum

X-129203394-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24129203394
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24129203394
    reference: chr 0
allele count: 1
allele frequency: 1.140081857877396e-5
allele num: 87713
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102034
  ensembl protein: ENSP00000338608
  ensembl transcript: ENST00000335997
  gene symbol: ELF4
  hgvsc: ENST00000335997.7:c.1068C>T
  hgvsp: ENST00000335997.7:c.1068C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3319
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000102034
  ensembl protein: ENSP00000311280
  ensembl transcript: ENST00000308167
  gene symbol: ELF4
  hgvsc: ENST00000308167.5:c.1068C>T
  hgvsp: ENST00000308167.5:c.1068C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3319
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6037
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Val356Val
num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 10122
  num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Latino
population: Other
reference allele: G
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum

X-129203411-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24129203411
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24129203411
    reference: chr 0
allele count: 1
allele frequency: 1.140263857056523e-5
allele num: 87699
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102034
  ensembl protein: ENSP00000311280
  ensembl transcript: ENST00000308167
  gene symbol: ELF4
  hgvsc: ENST00000308167.5:c.1051C>G
  hgvsp: ENSP00000311280.5:p.Pro351Ala
  variant of: http://identifiers.org/hgnc/3319
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102034
  ensembl protein: ENSP00000338608
  ensembl transcript: ENST00000335997
  gene symbol: ELF4
  hgvsc: ENST00000335997.7:c.1051C>G
  hgvsp: ENSP00000338608.7:p.Pro351Ala
  variant of: http://identifiers.org/hgnc/3319
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Pro351Ala
num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 9320
  num of homozygotes: 0
population: Other
population: East Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum

X-129203416-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24129203416
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24129203416
    reference: chr 0
allele count: 13
allele frequency: 1.482461341969621e-4
allele num: 87692
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102034
  ensembl protein: ENSP00000338608
  ensembl transcript: ENST00000335997
  gene symbol: ELF4
  hgvsc: ENST00000335997.7:c.1046A>G
  hgvsp: ENSP00000338608.7:p.Glu349Gly
  variant of: http://identifiers.org/hgnc/3319
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102034
  ensembl protein: ENSP00000311280
  ensembl transcript: ENST00000308167
  gene symbol: ELF4
  hgvsc: ENST00000308167.5:c.1046A>G
  hgvsp: ENSP00000311280.5:p.Glu349Gly
  variant of: http://identifiers.org/hgnc/3319
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
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  bin: 9.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
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  bin: 2.75e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 9.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6451
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  variant carriers: 0
hgvs: p.Glu349Gly
num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 10119
  num of homozygotes: 0
population: East Asian
population: Latino
population: European (Non-Finnish)
population: African
population: Other
population: European (Finnish)
reference allele: T
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: QD
site quality: VQSLOD

X-129203428-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24129203428
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24129203428
    reference: chr 0
allele count: 8
allele frequency: 9.12471200127746e-5
allele num: 87674
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102034
  ensembl protein: ENSP00000311280
  ensembl transcript: ENST00000308167
  gene symbol: ELF4
  hgvsc: ENST00000308167.5:c.1034G>C
  hgvsp: ENSP00000311280.5:p.Ser345Thr
  variant of: http://identifiers.org/hgnc/3319
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102034
  ensembl protein: ENSP00000338608
  ensembl transcript: ENST00000335997
  gene symbol: ELF4
  hgvsc: ENST00000335997.7:c.1034G>C
  hgvsp: ENSP00000338608.7:p.Ser345Thr
  variant of: http://identifiers.org/hgnc/3319
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2702
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
hgvs: p.Ser345Thr
num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 6634
  num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: African
population: Latino
population: Other
reference allele: C
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: VQSLOD

X-129203445-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24129203445
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24129203445
    reference: chr 0
allele count: 6
allele frequency: 6.847517204386976e-5
allele num: 87623
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000102034
  ensembl protein: ENSP00000311280
  ensembl transcript: ENST00000308167
  gene symbol: ELF4
  hgvsc: ENST00000308167.5:c.1017C>T
  hgvsp: ENST00000308167.5:c.1017C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3319
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102034
  ensembl protein: ENSP00000338608
  ensembl transcript: ENST00000335997
  gene symbol: ELF4
  hgvsc: ENST00000335997.7:c.1017C>T
  hgvsp: ENST00000335997.7:c.1017C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3319
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 92
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  variant carriers: 0
hgvs: p.Ala339Ala
num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 10110
  num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: African
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: MQ

X-129203446-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24129203446
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24129203446
    reference: chr 0
allele count: 1
allele frequency: 1.141278917154563e-5
allele num: 87621
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102034
  ensembl protein: ENSP00000311280
  ensembl transcript: ENST00000308167
  gene symbol: ELF4
  hgvsc: ENST00000308167.5:c.1016C>T
  hgvsp: ENSP00000311280.5:p.Ala339Val
  variant of: http://identifiers.org/hgnc/3319
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102034
  ensembl protein: ENSP00000338608
  ensembl transcript: ENST00000335997
  gene symbol: ELF4
  hgvsc: ENST00000335997.7:c.1016C>T
  hgvsp: ENSP00000338608.7:p.Ala339Val
  variant of: http://identifiers.org/hgnc/3319
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 2433
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hgvs: p.Ala339Val
num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 9310
  num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: East Asian
population: African
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: MQ

X-129203448-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24129203448
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24129203448
    reference: chr 0
allele count: 1
allele frequency: 1.141448269564423e-5
allele num: 87608
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102034
  ensembl protein: ENSP00000338608
  ensembl transcript: ENST00000335997
  gene symbol: ELF4
  hgvsc: ENST00000335997.7:c.1014T>C
  hgvsp: ENST00000335997.7:c.1014T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/3319
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000102034
  ensembl protein: ENSP00000311280
  ensembl transcript: ENST00000308167
  gene symbol: ELF4
  hgvsc: ENST00000308167.5:c.1014T>C
  hgvsp: ENST00000308167.5:c.1014T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/3319
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2703
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
hgvs: p.Ser338Ser
num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 10110
  num of homozygotes: 0
population: Other
population: African
population: Latino
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: A
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: MQ

X-129203456-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24129203456
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24129203456
    reference: chr 0
allele count: 3
allele frequency: 3.425948131145294e-5
allele num: 87567
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102034
  ensembl protein: ENSP00000311280
  ensembl transcript: ENST00000308167
  gene symbol: ELF4
  hgvsc: ENST00000308167.5:c.1006T>C
  hgvsp: ENSP00000311280.5:p.Ser336Pro
  variant of: http://identifiers.org/hgnc/3319
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102034
  ensembl protein: ENSP00000338608
  ensembl transcript: ENST00000335997
  gene symbol: ELF4
  hgvsc: ENST00000335997.7:c.1006T>C
  hgvsp: ENSP00000338608.7:p.Ser336Pro
  variant of: http://identifiers.org/hgnc/3319
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Ser336Pro
num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 6632
  num of homozygotes: 0
population: African
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: South Asian
population: Latino
reference allele: A
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: DP
site quality: InbreedingCoeff

X-129203457-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24129203457
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24129203457
    reference: chr 0
allele count: 1
allele frequency: 1.142100093652208e-5
allele num: 87558
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000102034
  ensembl protein: ENSP00000311280
  ensembl transcript: ENST00000308167
  gene symbol: ELF4
  hgvsc: ENST00000308167.5:c.1005A>G
  hgvsp: ENST00000308167.5:c.1005A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3319
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102034
  ensembl protein: ENSP00000338608
  ensembl transcript: ENST00000335997
  gene symbol: ELF4
  hgvsc: ENST00000335997.7:c.1005A>G
  hgvsp: ENST00000335997.7:c.1005A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3319
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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hgvs: p.Ser335Ser
num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 10110
  num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: African
population: European (Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: MQ

X-129203466-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24129203466
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24129203466
    reference: chr 0
allele count: 1
allele frequency: 1.142791840466259e-5
allele num: 87505
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000102034
  ensembl protein: ENSP00000311280
  ensembl transcript: ENST00000308167
  gene symbol: ELF4
  hgvsc: ENST00000308167.5:c.996C>A
  hgvsp: ENST00000308167.5:c.996C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3319
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102034
  ensembl protein: ENSP00000338608
  ensembl transcript: ENST00000335997
  gene symbol: ELF4
  hgvsc: ENST00000335997.7:c.996C>A
  hgvsp: ENST00000335997.7:c.996C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3319
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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hgvs: p.Ser332Ser
num of homozygotes: 0
population: Other
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 630
  num of homozygotes: 0
population: South Asian
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum

X-129203470-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24129203470
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24129203470
    reference: chr 0
allele count: 1
allele frequency: 1.143196835631159e-5
allele num: 87474
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102034
  ensembl protein: ENSP00000338608
  ensembl transcript: ENST00000335997
  gene symbol: ELF4
  hgvsc: ENST00000335997.7:c.992G>A
  hgvsp: ENSP00000338608.7:p.Ser331Asn
  variant of: http://identifiers.org/hgnc/3319
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102034
  ensembl protein: ENSP00000311280
  ensembl transcript: ENST00000308167
  gene symbol: ELF4
  hgvsc: ENST00000308167.5:c.992G>A
  hgvsp: ENSP00000311280.5:p.Ser331Asn
  variant of: http://identifiers.org/hgnc/3319
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2060
  bin: 6.75e1
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Ser331Asn
num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 10086
  num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Latino
population: East Asian
reference allele: C
site quality: ReadPosRankSum
site quality: QD
site quality: DP
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site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
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X-129203471-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24129203471
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24129203471
    reference: chr 0
allele count: 1
allele frequency: 1.143183766790512e-5
allele num: 87475
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102034
  ensembl protein: ENSP00000338608
  ensembl transcript: ENST00000335997
  gene symbol: ELF4
  hgvsc: ENST00000335997.7:c.991A>G
  hgvsp: ENSP00000338608.7:p.Ser331Gly
  variant of: http://identifiers.org/hgnc/3319
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102034
  ensembl protein: ENSP00000311280
  ensembl transcript: ENST00000308167
  gene symbol: ELF4
  hgvsc: ENST00000308167.5:c.991A>G
  hgvsp: ENSP00000311280.5:p.Ser331Gly
  variant of: http://identifiers.org/hgnc/3319
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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hgvs: p.Ser331Gly
num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 1
  allele frequency: 2.090650610469978e-5
  allele num: 47832
  num of homozygotes: 0
population: South Asian
population: African
population: East Asian
population: Other
population: Latino
population: European (Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
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site quality: MQRankSum
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site quality: QD

X-129203476-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24129203476
    reference: chr 0
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    type: ExactPosition
    position: 24129203476
    reference: chr 0
allele count: 1
allele frequency: 1.143654433376411e-5
allele num: 87439
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102034
  ensembl protein: ENSP00000338608
  ensembl transcript: ENST00000335997
  gene symbol: ELF4
  hgvsc: ENST00000335997.7:c.986G>A
  hgvsp: ENSP00000338608.7:p.Arg329Gln
  variant of: http://identifiers.org/hgnc/3319
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102034
  ensembl protein: ENSP00000311280
  ensembl transcript: ENST00000308167
  gene symbol: ELF4
  hgvsc: ENST00000308167.5:c.986G>A
  hgvsp: ENSP00000311280.5:p.Arg329Gln
  variant of: http://identifiers.org/hgnc/3319
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
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hgvs: p.Arg329Gln
num of homozygotes: 0
population: Latino
  type: Population
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  allele num: 9299
  num of homozygotes: 0
population: European (Finnish)
population: African
population: Other
population: East Asian
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
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site quality: QD

X-129203479-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24129203479
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24129203479
    reference: chr 0
allele count: 2
allele frequency: 2.287963026517492e-5
allele num: 87414
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102034
  ensembl protein: ENSP00000338608
  ensembl transcript: ENST00000335997
  gene symbol: ELF4
  hgvsc: ENST00000335997.7:c.983G>A
  hgvsp: ENSP00000338608.7:p.Arg328Gln
  variant of: http://identifiers.org/hgnc/3319
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102034
  ensembl protein: ENSP00000311280
  ensembl transcript: ENST00000308167
  gene symbol: ELF4
  hgvsc: ENST00000308167.5:c.983G>A
  hgvsp: ENSP00000311280.5:p.Arg328Gln
  variant of: http://identifiers.org/hgnc/3319
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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hgvs: p.Arg328Gln
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population: African
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  allele num: 8455
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population: Other
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population: South Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
reference allele: C
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
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site quality: DP
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X-129203480-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24129203480
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24129203480
    reference: chr 0
allele count: 7
allele frequency: 8.009519886493661e-5
allele num: 87396
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102034
  ensembl protein: ENSP00000338608
  ensembl transcript: ENST00000335997
  gene symbol: ELF4
  hgvsc: ENST00000335997.7:c.982C>T
  hgvsp: ENSP00000338608.7:p.Arg328Trp
  variant of: http://identifiers.org/hgnc/3319
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102034
  ensembl protein: ENSP00000311280
  ensembl transcript: ENST00000308167
  gene symbol: ELF4
  hgvsc: ENST00000308167.5:c.982C>T
  hgvsp: ENSP00000311280.5:p.Arg328Trp
  variant of: http://identifiers.org/hgnc/3319
canonical: true
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Arg328Trp
num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 4530
  num of homozygotes: 0
population: African
population: South Asian
population: East Asian
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: DP

X-129203503-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24129203503
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24129203503
    reference: chr 0
allele count: 1
allele frequency: 1.147815706710131e-5
allele num: 87122
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102034
  ensembl protein: ENSP00000338608
  ensembl transcript: ENST00000335997
  gene symbol: ELF4
  hgvsc: ENST00000335997.7:c.959C>T
  hgvsp: ENSP00000338608.7:p.Ser320Phe
  variant of: http://identifiers.org/hgnc/3319
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102034
  ensembl protein: ENSP00000311280
  ensembl transcript: ENST00000308167
  gene symbol: ELF4
  hgvsc: ENST00000308167.5:c.959C>T
  hgvsp: ENSP00000311280.5:p.Ser320Phe
  variant of: http://identifiers.org/hgnc/3319
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
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  bin: 6.75e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Ser320Phe
num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 8407
  num of homozygotes: 0
population: Other
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Latino
population: European (Finnish)
reference allele: G
site quality: DP
site quality: VQSLOD
site quality: FS
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site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
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X-129203508-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24129203508
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24129203508
    reference: chr 0
allele count: 3
allele frequency: 3.443921478590288e-5
allele num: 87110
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102034
  ensembl protein: ENSP00000338608
  ensembl transcript: ENST00000335997
  gene symbol: ELF4
  hgvsc: ENST00000335997.7:c.954G>A
  hgvsp: ENST00000335997.7:c.954G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3319
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000102034
  ensembl protein: ENSP00000311280
  ensembl transcript: ENST00000308167
  gene symbol: ELF4
  hgvsc: ENST00000308167.5:c.954G>A
  hgvsp: ENST00000308167.5:c.954G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3319
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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hgvs: p.Thr318Thr
num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 2
  allele frequency: 4.192784218360202e-5
  allele num: 47701
  num of homozygotes: 0
population: East Asian
population: Other
population: European (Finnish)
population: Latino
population: African
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: MQ

X-129203509-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24129203509
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24129203509
    reference: chr 0
allele count: 1
allele frequency: 1.148395691219367e-5
allele num: 87078
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102034
  ensembl protein: ENSP00000311280
  ensembl transcript: ENST00000308167
  gene symbol: ELF4
  hgvsc: ENST00000308167.5:c.953C>T
  hgvsp: ENSP00000311280.5:p.Thr318Met
  variant of: http://identifiers.org/hgnc/3319
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102034
  ensembl protein: ENSP00000338608
  ensembl transcript: ENST00000335997
  gene symbol: ELF4
  hgvsc: ENST00000335997.7:c.953C>T
  hgvsp: ENSP00000338608.7:p.Thr318Met
  variant of: http://identifiers.org/hgnc/3319
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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hgvs: p.Thr318Met
num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 1
  allele frequency: 1.509206157561123e-4
  allele num: 6626
  num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: Other
population: South Asian
population: European (Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: FS
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site quality: QD
site quality: MQRankSum
site quality: VQSLOD
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site quality: DP
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X-129203523-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24129203523
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24129203523
    reference: chr 0
allele count: 1
allele frequency: 1.150020125352194e-5
allele num: 86955
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000102034
  ensembl protein: ENSP00000311280
  ensembl transcript: ENST00000308167
  gene symbol: ELF4
  hgvsc: ENST00000308167.5:c.939A>G
  hgvsp: ENST00000308167.5:c.939A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3319
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102034
  ensembl protein: ENSP00000338608
  ensembl transcript: ENST00000335997
  gene symbol: ELF4
  hgvsc: ENST00000335997.7:c.939A>G
  hgvsp: ENST00000335997.7:c.939A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3319
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3082
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 8.75e1
  variant carriers: 0
hgvs: p.Pro313Pro
num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 9825
  num of homozygotes: 0
population: East Asian
population: Latino
population: European (Non-Finnish)
population: African
population: Other
population: European (Finnish)
reference allele: T
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: MQRankSum

X-129203530-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24129203530
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24129203530
    reference: chr 0
allele count: 1
allele frequency: 1.151198397531831e-5
allele num: 86866
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102034
  ensembl protein: ENSP00000338608
  ensembl transcript: ENST00000335997
  gene symbol: ELF4
  hgvsc: ENST00000335997.7:c.932C>A
  hgvsp: ENSP00000338608.7:p.Ala311Glu
  variant of: http://identifiers.org/hgnc/3319
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102034
  ensembl protein: ENSP00000311280
  ensembl transcript: ENST00000308167
  gene symbol: ELF4
  hgvsc: ENST00000308167.5:c.932C>A
  hgvsp: ENSP00000311280.5:p.Ala311Glu
  variant of: http://identifiers.org/hgnc/3319
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10148
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 211
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  variant carriers: 0
hgvs: p.Ala311Glu
num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 47628
  num of homozygotes: 0
population: Latino
population: African
population: Other
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: G
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: MQ

X-129203540-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24129203540
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24129203540
    reference: chr 0
allele count: 1
allele frequency: 1.153961550001154e-5
allele num: 86658
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102034
  ensembl protein: ENSP00000311280
  ensembl transcript: ENST00000308167
  gene symbol: ELF4
  hgvsc: ENST00000308167.5:c.922G>A
  hgvsp: ENSP00000311280.5:p.Glu308Lys
  variant of: http://identifiers.org/hgnc/3319
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102034
  ensembl protein: ENSP00000338608
  ensembl transcript: ENST00000335997
  gene symbol: ELF4
  hgvsc: ENST00000335997.7:c.922G>A
  hgvsp: ENSP00000338608.7:p.Glu308Lys
  variant of: http://identifiers.org/hgnc/3319
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4012
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Glu308Lys
num of homozygotes: 0
population: Other
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 618
  num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: African
population: South Asian
population: European (Finnish)
population: Latino
reference allele: C
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD

X-129203568-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24129203568
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24129203568
    reference: chr 0
allele count: 1
allele frequency: 1.153988183161005e-5
allele num: 86656
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102034
  ensembl protein: ENSP00000338608
  ensembl transcript: ENST00000335997
  gene symbol: ELF4
  hgvsc: ENST00000335997.7:c.894G>T
  hgvsp: ENST00000335997.7:c.894G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3319
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000102034
  ensembl protein: ENSP00000311280
  ensembl transcript: ENST00000308167
  gene symbol: ELF4
  hgvsc: ENST00000308167.5:c.894G>T
  hgvsp: ENST00000308167.5:c.894G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3319
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 4339
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Val298Val
num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 9569
  num of homozygotes: 0
population: Other
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP

X-129203584-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24129203584
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24129203584
    reference: chr 0
allele count: 1
allele frequency: 1.152804196207274e-5
allele num: 86745
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102034
  ensembl protein: ENSP00000338608
  ensembl transcript: ENST00000335997
  gene symbol: ELF4
  hgvsc: ENST00000335997.7:c.878T>G
  hgvsp: ENSP00000338608.7:p.Met293Arg
  variant of: http://identifiers.org/hgnc/3319
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102034
  ensembl protein: ENSP00000311280
  ensembl transcript: ENST00000308167
  gene symbol: ELF4
  hgvsc: ENST00000308167.5:c.878T>G
  hgvsp: ENSP00000311280.5:p.Met293Arg
  variant of: http://identifiers.org/hgnc/3319
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 361
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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hgvs: p.Met293Arg
num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 9292
  num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Other
population: South Asian
population: African
reference allele: A
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: MQ

X-129203594-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24129203594
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24129203594
    reference: chr 0
allele count: 4
allele frequency: 4.608507304484078e-5
allele num: 86796
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102034
  ensembl protein: ENSP00000311280
  ensembl transcript: ENST00000308167
  gene symbol: ELF4
  hgvsc: ENST00000308167.5:c.868T>G
  hgvsp: ENSP00000311280.5:p.Phe290Val
  variant of: http://identifiers.org/hgnc/3319
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102034
  ensembl protein: ENSP00000338608
  ensembl transcript: ENST00000335997
  gene symbol: ELF4
  hgvsc: ENST00000335997.7:c.868T>G
  hgvsp: ENSP00000338608.7:p.Phe290Val
  variant of: http://identifiers.org/hgnc/3319
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1518
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 965
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 4.25e1
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genotype depth: GenotypeDepth
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  bin: 6.25e1
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 2.25e1
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genotype quality: GenotypeQuality
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  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Phe290Val
num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 9296
  num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Other
population: African
population: East Asian
population: European (Non-Finnish)
reference allele: A
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: ReadPosRankSum

X-129203596-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24129203596
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24129203596
    reference: chr 0
allele count: 1
allele frequency: 1.151768540594082e-5
allele num: 86823
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102034
  ensembl protein: ENSP00000311280
  ensembl transcript: ENST00000308167
  gene symbol: ELF4
  hgvsc: ENST00000308167.5:c.866A>C
  hgvsp: ENSP00000311280.5:p.Gln289Pro
  variant of: http://identifiers.org/hgnc/3319
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102034
  ensembl protein: ENSP00000338608
  ensembl transcript: ENST00000335997
  gene symbol: ELF4
  hgvsc: ENST00000335997.7:c.866A>C
  hgvsp: ENSP00000338608.7:p.Gln289Pro
  variant of: http://identifiers.org/hgnc/3319
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 926
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
hgvs: p.Gln289Pro
num of homozygotes: 0
population: Other
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 626
  num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: African
population: East Asian
reference allele: T
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum

X-129203599-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24129203599
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24129203599
    reference: chr 0
allele count: 1
allele frequency: 1.151543067710732e-5
allele num: 86840
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102034
  ensembl protein: ENSP00000311280
  ensembl transcript: ENST00000308167
  gene symbol: ELF4
  hgvsc: ENST00000308167.5:c.863A>C
  hgvsp: ENSP00000311280.5:p.Tyr288Ser
  variant of: http://identifiers.org/hgnc/3319
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102034
  ensembl protein: ENSP00000338608
  ensembl transcript: ENST00000335997
  gene symbol: ELF4
  hgvsc: ENST00000335997.7:c.863A>C
  hgvsp: ENSP00000338608.7:p.Tyr288Ser
  variant of: http://identifiers.org/hgnc/3319
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9993
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Tyr288Ser
num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 1
  allele frequency: 2.097623392696075e-5
  allele num: 47673
  num of homozygotes: 0
population: Latino
population: European (Finnish)
population: Other
population: South Asian
population: East Asian
population: African
reference allele: T
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum

X-129203600-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24129203600
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24129203600
    reference: chr 0
allele count: 7
allele frequency: 8.061544131195872e-5
allele num: 86832
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102034
  ensembl protein: ENSP00000338608
  ensembl transcript: ENST00000335997
  gene symbol: ELF4
  hgvsc: ENST00000335997.7:c.862T>G
  hgvsp: ENSP00000338608.7:p.Tyr288Asp
  variant of: http://identifiers.org/hgnc/3319
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102034
  ensembl protein: ENSP00000311280
  ensembl transcript: ENST00000308167
  gene symbol: ELF4
  hgvsc: ENST00000308167.5:c.862T>G
  hgvsp: ENSP00000311280.5:p.Tyr288Asp
  variant of: http://identifiers.org/hgnc/3319
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 3728
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Tyr288Asp
num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 9653
  num of homozygotes: 0
population: East Asian
population: Other
population: European (Finnish)
population: Latino
population: African
population: European (Non-Finnish)
reference allele: A
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: QD

X-129203602-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24129203602
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24129203602
    reference: chr 0
allele count: 740
allele frequency: 8.888248294417219e-3
allele num: 83256
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102034
  ensembl protein: ENSP00000311280
  ensembl transcript: ENST00000308167
  gene symbol: ELF4
  hgvsc: ENST00000308167.5:c.860T>G
  hgvsp: ENSP00000311280.5:p.Val287Gly
  variant of: http://identifiers.org/hgnc/3319
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102034
  ensembl protein: ENSP00000338608
  ensembl transcript: ENST00000335997
  gene symbol: ELF4
  hgvsc: ENST00000335997.7:c.860T>G
  hgvsp: ENSP00000338608.7:p.Val287Gly
  variant of: http://identifiers.org/hgnc/3319
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.95to100.00
genotype depth: GenotypeDepth
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  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 8.75e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 5.25e1
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genotype quality: GenotypeQuality
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  bin: 1.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 5416
  bin: 6.75e1
  variant carriers: 28
hgvs: p.Val287Gly
num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 18
  allele frequency: 2.763703362505758e-3
  allele num: 6513
  num of homozygotes: 0
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
population: South Asian
reference allele: A
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum

X-129203656-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24129203656
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24129203656
    reference: chr 0
allele count: 12
allele frequency: 1.377189156930704e-4
allele num: 87134
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102034
  ensembl protein: ENSP00000311280
  ensembl transcript: ENST00000308167
  gene symbol: ELF4
  hgvsc: ENST00000308167.5:c.810-4C>G
  variant of: http://identifiers.org/hgnc/3319
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102034
  ensembl protein: ENSP00000338608
  ensembl transcript: ENST00000335997
  gene symbol: ELF4
  hgvsc: ENST00000335997.7:c.810-4C>G
  variant of: http://identifiers.org/hgnc/3319
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10149
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: c.810-4C>G
num of homozygotes: 0
population: African
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 8366
  num of homozygotes: 0
population: South Asian
population: Latino
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Other
reference allele: G
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum

X-129203661-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24129203661
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24129203661
    reference: chr 0
allele count: 2
allele frequency: 2.296738631143776e-5
allele num: 87080
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102034
  ensembl protein: ENSP00000338608
  ensembl transcript: ENST00000335997
  gene symbol: ELF4
  hgvsc: ENST00000335997.7:c.810-9T>A
  variant of: http://identifiers.org/hgnc/3319
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102034
  ensembl protein: ENSP00000311280
  ensembl transcript: ENST00000308167
  gene symbol: ELF4
  hgvsc: ENST00000308167.5:c.810-9T>A
  variant of: http://identifiers.org/hgnc/3319
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10116
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 2
  allele frequency: 4.196038939241356e-5
  allele num: 47664
  num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: East Asian
population: South Asian
population: Other
reference allele: A
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: VQSLOD

X-129203664-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24129203664
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24129203664
    reference: chr 0
allele count: 1
allele frequency: 1.149081883575024e-5
allele num: 87026
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102034
  ensembl protein: ENSP00000311280
  ensembl transcript: ENST00000308167
  gene symbol: ELF4
  hgvsc: ENST00000308167.5:c.810-12C>T
  variant of: http://identifiers.org/hgnc/3319
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102034
  ensembl protein: ENSP00000338608
  ensembl transcript: ENST00000335997
  gene symbol: ELF4
  hgvsc: ENST00000335997.7:c.810-12C>T
  variant of: http://identifiers.org/hgnc/3319
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12302
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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num of homozygotes: 0
population: Other
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 630
  num of homozygotes: 0
population: Latino
population: European (Finnish)
population: East Asian
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ

X-129203667-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24129203667
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24129203667
    reference: chr 0
allele count: 3
allele frequency: 3.448711906103071e-5
allele num: 86989
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102034
  ensembl protein: ENSP00000311280
  ensembl transcript: ENST00000308167
  gene symbol: ELF4
  hgvsc: ENST00000308167.5:c.810-15C>A
  variant of: http://identifiers.org/hgnc/3319
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102034
  ensembl protein: ENSP00000338608
  ensembl transcript: ENST00000335997
  gene symbol: ELF4
  hgvsc: ENST00000335997.7:c.810-15C>A
  variant of: http://identifiers.org/hgnc/3319
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: Other
  type: Population
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  allele num: 628
  num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: East Asian
population: African
population: European (Finnish)
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
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site quality: DP
site quality: InbreedingCoeff
site quality: FS
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site quality: VQSLOD
site quality: QD

X-129203673-A-G
type: Variant
location: Region
  begin: Position
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    position: 24129203673
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24129203673
    reference: chr 0
allele count: 1
allele frequency: 1.150245002185465e-5
allele num: 86938
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102034
  ensembl protein: ENSP00000338608
  ensembl transcript: ENST00000335997
  gene symbol: ELF4
  hgvsc: ENST00000335997.7:c.810-21T>C
  variant of: http://identifiers.org/hgnc/3319
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102034
  ensembl protein: ENSP00000311280
  ensembl transcript: ENST00000308167
  gene symbol: ELF4
  hgvsc: ENST00000308167.5:c.810-21T>C
  variant of: http://identifiers.org/hgnc/3319
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: East Asian
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  allele num: 6620
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population: African
population: European (Finnish)
population: South Asian
population: Other
population: Latino
population: European (Non-Finnish)
reference allele: A
site quality: FS
site quality: MQ
site quality: DP
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site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
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X-129203687-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24129203687
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24129203687
    reference: chr 0
allele count: 1
allele frequency: 1.153309421384663e-5
allele num: 86707
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102034
  ensembl protein: ENSP00000311280
  ensembl transcript: ENST00000308167
  gene symbol: ELF4
  hgvsc: ENST00000308167.5:c.810-35G>A
  variant of: http://identifiers.org/hgnc/3319
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102034
  ensembl protein: ENSP00000338608
  ensembl transcript: ENST00000335997
  gene symbol: ELF4
  hgvsc: ENST00000335997.7:c.810-35G>A
  variant of: http://identifiers.org/hgnc/3319
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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population: African
population: European (Finnish)
population: East Asian
population: Latino
population: Other
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
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X-129203688-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24129203688
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24129203688
    reference: chr 0
allele count: 69
allele frequency: 7.960130130823008e-4
allele num: 86682
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102034
  ensembl protein: ENSP00000338608
  ensembl transcript: ENST00000335997
  gene symbol: ELF4
  hgvsc: ENST00000335997.7:c.810-36C>T
  variant of: http://identifiers.org/hgnc/3319
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102034
  ensembl protein: ENSP00000311280
  ensembl transcript: ENST00000308167
  gene symbol: ELF4
  hgvsc: ENST00000308167.5:c.810-36C>T
  variant of: http://identifiers.org/hgnc/3319
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2012
  bin: 6.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
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population: African
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population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
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site quality: DP
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X-129203691-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24129203691
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24129203691
    reference: chr 0
allele count: 1
allele frequency: 1.153402537485583e-5
allele num: 86700
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102034
  ensembl protein: ENSP00000338608
  ensembl transcript: ENST00000335997
  gene symbol: ELF4
  hgvsc: ENST00000335997.7:c.810-39T>C
  variant of: http://identifiers.org/hgnc/3319
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102034
  ensembl protein: ENSP00000311280
  ensembl transcript: ENST00000308167
  gene symbol: ELF4
  hgvsc: ENST00000308167.5:c.810-39T>C
  variant of: http://identifiers.org/hgnc/3319
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 960
  bin: 9.75e1
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 9302
  num of homozygotes: 0
population: Other
population: East Asian
population: South Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
reference allele: A
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: FS

X-129203692-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24129203692
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24129203692
    reference: chr 0
allele count: 1
allele frequency: 1.153788464422933e-5
allele num: 86671
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102034
  ensembl protein: ENSP00000311280
  ensembl transcript: ENST00000308167
  gene symbol: ELF4
  hgvsc: ENST00000308167.5:c.810-40C>T
  variant of: http://identifiers.org/hgnc/3319
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102034
  ensembl protein: ENSP00000338608
  ensembl transcript: ENST00000335997
  gene symbol: ELF4
  hgvsc: ENST00000335997.7:c.810-40C>T
  variant of: http://identifiers.org/hgnc/3319
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2007
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: European (Finnish)
  type: Population
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  allele frequency: 0.0e0
  allele num: 4523
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population: East Asian
population: Other
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
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site quality: VQSLOD

X-129203696-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24129203696
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24129203696
    reference: chr 0
allele count: 6
allele frequency: 6.933210076265311e-5
allele num: 86540
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102034
  ensembl protein: ENSP00000338608
  ensembl transcript: ENST00000335997
  gene symbol: ELF4
  hgvsc: ENST00000335997.7:c.810-44C>G
  variant of: http://identifiers.org/hgnc/3319
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102034
  ensembl protein: ENSP00000311280
  ensembl transcript: ENST00000308167
  gene symbol: ELF4
  hgvsc: ENST00000308167.5:c.810-44C>G
  variant of: http://identifiers.org/hgnc/3319
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
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  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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population: East Asian
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  allele num: 6612
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population: South Asian
population: African
population: European (Non-Finnish)
population: Other
population: Latino
population: European (Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
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site quality: DP

X-129203697-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24129203697
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24129203697
    reference: chr 0
allele count: 3
allele frequency: 3.466645096430511e-5
allele num: 86539
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102034
  ensembl protein: ENSP00000311280
  ensembl transcript: ENST00000308167
  gene symbol: ELF4
  hgvsc: ENST00000308167.5:c.810-45C>T
  variant of: http://identifiers.org/hgnc/3319
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102034
  ensembl protein: ENSP00000338608
  ensembl transcript: ENST00000335997
  gene symbol: ELF4
  hgvsc: ENST00000335997.7:c.810-45C>T
  variant of: http://identifiers.org/hgnc/3319
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 691
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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population: East Asian
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population: Other
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population: European (Non-Finnish)
reference allele: G
site quality: MQ
site quality: FS
site quality: VQSLOD
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X-129204964-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24129204964
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24129204964
    reference: chr 0
allele count: 2
allele frequency: 2.279384110413366e-5
allele num: 87743
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102034
  ensembl protein: ENSP00000311280
  ensembl transcript: ENST00000308167
  gene symbol: ELF4
  hgvsc: ENST00000308167.5:c.809+51C>T
  variant of: http://identifiers.org/hgnc/3319
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102034
  ensembl protein: ENSP00000338608
  ensembl transcript: ENST00000335997
  gene symbol: ELF4
  hgvsc: ENST00000335997.7:c.809+51C>T
  variant of: http://identifiers.org/hgnc/3319
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  allele num: 633
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population: Latino
population: East Asian
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population: African
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population: European (Finnish)
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site quality: ClippingRankSum
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site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: QD

X-129204967-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24129204967
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24129204967
    reference: chr 0
allele count: 2
allele frequency: 2.279254228016593e-5
allele num: 87748
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102034
  ensembl protein: ENSP00000338608
  ensembl transcript: ENST00000335997
  gene symbol: ELF4
  hgvsc: ENST00000335997.7:c.809+48A>G
  variant of: http://identifiers.org/hgnc/3319
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102034
  ensembl protein: ENSP00000311280
  ensembl transcript: ENST00000308167
  gene symbol: ELF4
  hgvsc: ENST00000308167.5:c.809+48A>G
  variant of: http://identifiers.org/hgnc/3319
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
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genotype depth: GenotypeDepth
  all individuals: 334
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 5.25e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 297
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genotype depth: GenotypeDepth
  all individuals: 948
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 7.5e0
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 2783
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 19
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  variant carriers: 0
num of homozygotes: 0
population: Latino
  type: Population
  allele count: 2
  allele frequency: 2.145922746781116e-4
  allele num: 9320
  num of homozygotes: 0
population: African
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Other
population: East Asian
reference allele: T
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD

X-129204972-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24129204972
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24129204972
    reference: chr 0
allele count: 4
allele frequency: 4.558560406623588e-5
allele num: 87747
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102034
  ensembl protein: ENSP00000338608
  ensembl transcript: ENST00000335997
  gene symbol: ELF4
  hgvsc: ENST00000335997.7:c.809+43C>T
  variant of: http://identifiers.org/hgnc/3319
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102034
  ensembl protein: ENSP00000311280
  ensembl transcript: ENST00000308167
  gene symbol: ELF4
  hgvsc: ENST00000308167.5:c.809+43C>T
  variant of: http://identifiers.org/hgnc/3319
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1083
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 642
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 404
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: Latino
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 9320
  num of homozygotes: 0
population: Other
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: African
reference allele: G
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: QD

X-129204976-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24129204976
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24129204976
    reference: chr 0
allele count: 1
allele frequency: 1.13960113960114e-5
allele num: 87750
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102034
  ensembl protein: ENSP00000338608
  ensembl transcript: ENST00000335997
  gene symbol: ELF4
  hgvsc: ENST00000335997.7:c.809+39G>T
  variant of: http://identifiers.org/hgnc/3319
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102034
  ensembl protein: ENSP00000311280
  ensembl transcript: ENST00000308167
  gene symbol: ELF4
  hgvsc: ENST00000308167.5:c.809+39G>T
  variant of: http://identifiers.org/hgnc/3319
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 6638
  num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: Other
population: African
population: European (Finnish)
population: South Asian
reference allele: C
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: QD
site quality: InbreedingCoeff

X-129204980-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24129204980
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24129204980
    reference: chr 0
allele count: 1
allele frequency: 1.13960113960114e-5
allele num: 87750
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102034
  ensembl protein: ENSP00000338608
  ensembl transcript: ENST00000335997
  gene symbol: ELF4
  hgvsc: ENST00000335997.7:c.809+35C>T
  variant of: http://identifiers.org/hgnc/3319
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102034
  ensembl protein: ENSP00000311280
  ensembl transcript: ENST00000308167
  gene symbol: ELF4
  hgvsc: ENST00000308167.5:c.809+35C>T
  variant of: http://identifiers.org/hgnc/3319
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
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  variant carriers: 1
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 6638
  num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: DP

X-129204988-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24129204988
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24129204988
    reference: chr 0
allele count: 1
allele frequency: 1.139627114008296e-5
allele num: 87748
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102034
  ensembl protein: ENSP00000311280
  ensembl transcript: ENST00000308167
  gene symbol: ELF4
  hgvsc: ENST00000308167.5:c.809+27C>T
  variant of: http://identifiers.org/hgnc/3319
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102034
  ensembl protein: ENSP00000338608
  ensembl transcript: ENST00000335997
  gene symbol: ELF4
  hgvsc: ENST00000335997.7:c.809+27C>T
  variant of: http://identifiers.org/hgnc/3319
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1732
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 369
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: South Asian
  type: Population
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  allele num: 10124
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population: Other
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: African
population: East Asian
reference allele: G
site quality: DP
site quality: FS
site quality: InbreedingCoeff
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X-129204997-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24129204997
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24129204997
    reference: chr 0
allele count: 7
allele frequency: 7.976935261472542e-5
allele num: 87753
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102034
  ensembl protein: ENSP00000338608
  ensembl transcript: ENST00000335997
  gene symbol: ELF4
  hgvsc: ENST00000335997.7:c.809+18G>A
  variant of: http://identifiers.org/hgnc/3319
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102034
  ensembl protein: ENSP00000311280
  ensembl transcript: ENST00000308167
  gene symbol: ELF4
  hgvsc: ENST00000308167.5:c.809+18G>A
  variant of: http://identifiers.org/hgnc/3319
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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population: European (Non-Finnish)
  type: Population
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  allele num: 47988
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population: African
population: East Asian
population: Latino
population: European (Finnish)
population: South Asian
population: Other
reference allele: C
site quality: QD
site quality: DP
site quality: FS
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X-129205018-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24129205018
    reference: chr 0
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    type: ExactPosition
    position: 24129205018
    reference: chr 0
allele count: 1
allele frequency: 1.139536208763033e-5
allele num: 87755
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102034
  ensembl protein: ENSP00000311280
  ensembl transcript: ENST00000308167
  gene symbol: ELF4
  hgvsc: ENST00000308167.5:c.806T>A
  hgvsp: ENSP00000311280.5:p.Leu269Gln
  variant of: http://identifiers.org/hgnc/3319
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102034
  ensembl protein: ENSP00000338608
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  gene symbol: ELF4
  hgvsc: ENST00000335997.7:c.806T>A
  hgvsp: ENSP00000338608.7:p.Leu269Gln
  variant of: http://identifiers.org/hgnc/3319
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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hgvs: p.Leu269Gln
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population: European (Finnish)
  type: Population
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  allele num: 4530
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population: Other
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: African
population: Latino
reference allele: A
site quality: QD
site quality: VQSLOD
site quality: MQ
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site quality: InbreedingCoeff
site quality: DP
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X-129205024-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24129205024
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24129205024
    reference: chr 0
allele count: 1
allele frequency: 1.13954919433872e-5
allele num: 87754
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102034
  ensembl protein: ENSP00000338608
  ensembl transcript: ENST00000335997
  gene symbol: ELF4
  hgvsc: ENST00000335997.7:c.800G>A
  hgvsp: ENSP00000338608.7:p.Arg267Gln
  variant of: http://identifiers.org/hgnc/3319
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102034
  ensembl protein: ENSP00000311280
  ensembl transcript: ENST00000308167
  gene symbol: ELF4
  hgvsc: ENST00000308167.5:c.800G>A
  hgvsp: ENSP00000311280.5:p.Arg267Gln
  variant of: http://identifiers.org/hgnc/3319
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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hgvs: p.Arg267Gln
num of homozygotes: 0
population: African
  type: Population
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  allele num: 8516
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population: European (Non-Finnish)
population: Latino
population: Other
population: South Asian
population: East Asian
population: European (Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: QD
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site quality: MQ

X-129205026-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24129205026
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24129205026
    reference: chr 0
allele count: 4
allele frequency: 4.558092893933178e-5
allele num: 87756
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102034
  ensembl protein: ENSP00000338608
  ensembl transcript: ENST00000335997
  gene symbol: ELF4
  hgvsc: ENST00000335997.7:c.798G>A
  hgvsp: ENST00000335997.7:c.798G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3319
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000102034
  ensembl protein: ENSP00000311280
  ensembl transcript: ENST00000308167
  gene symbol: ELF4
  hgvsc: ENST00000308167.5:c.798G>A
  hgvsp: ENST00000308167.5:c.798G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3319
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Gly266Gly
num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 4530
  num of homozygotes: 0
population: South Asian
population: Other
population: East Asian
population: European (Non-Finnish)
population: Latino
population: African
reference allele: C
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP

X-129205044-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24129205044
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24129205044
    reference: chr 0
allele count: 1
allele frequency: 1.139458301523456e-5
allele num: 87761
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102034
  ensembl protein: ENSP00000338608
  ensembl transcript: ENST00000335997
  gene symbol: ELF4
  hgvsc: ENST00000335997.7:c.780G>A
  hgvsp: ENSP00000338608.7:p.Met260Ile
  variant of: http://identifiers.org/hgnc/3319
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102034
  ensembl protein: ENSP00000311280
  ensembl transcript: ENST00000308167
  gene symbol: ELF4
  hgvsc: ENST00000308167.5:c.780G>A
  hgvsp: ENSP00000311280.5:p.Met260Ile
  variant of: http://identifiers.org/hgnc/3319
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Met260Ile
num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 1
  allele frequency: 2.083506958913243e-5
  allele num: 47996
  num of homozygotes: 0
population: East Asian
population: African
population: South Asian
population: European (Finnish)
population: Other
population: Latino
reference allele: C
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
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site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
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site quality: DP

X-129205068-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24129205068
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24129205068
    reference: chr 0
allele count: 2
allele frequency: 2.278864669621595e-5
allele num: 87763
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000102034
  ensembl protein: ENSP00000311280
  ensembl transcript: ENST00000308167
  gene symbol: ELF4
  hgvsc: ENST00000308167.5:c.756G>A
  hgvsp: ENST00000308167.5:c.756G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3319
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102034
  ensembl protein: ENSP00000338608
  ensembl transcript: ENST00000335997
  gene symbol: ELF4
  hgvsc: ENST00000335997.7:c.756G>A
  hgvsp: ENST00000335997.7:c.756G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3319
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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hgvs: p.Gly252Gly
num of homozygotes: 0
population: East Asian
  type: Population
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  allele frequency: 0.0e0
  allele num: 6638
  num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: South Asian
population: African
population: Latino
reference allele: C
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
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site quality: VQSLOD
site quality: FS
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site quality: QD
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X-129205078-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24129205078
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24129205078
    reference: chr 0
allele count: 2
allele frequency: 2.278838703796545e-5
allele num: 87764
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102034
  ensembl protein: ENSP00000311280
  ensembl transcript: ENST00000308167
  gene symbol: ELF4
  hgvsc: ENST00000308167.5:c.746A>G
  hgvsp: ENSP00000311280.5:p.Lys249Arg
  variant of: http://identifiers.org/hgnc/3319
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102034
  ensembl protein: ENSP00000338608
  ensembl transcript: ENST00000335997
  gene symbol: ELF4
  hgvsc: ENST00000335997.7:c.746A>G
  hgvsp: ENSP00000338608.7:p.Lys249Arg
  variant of: http://identifiers.org/hgnc/3319
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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hgvs: p.Lys249Arg
num of homozygotes: 0
population: Latino
  type: Population
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  allele frequency: 0.0e0
  allele num: 9323
  num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Finnish)
population: African
population: Other
population: European (Non-Finnish)
reference allele: T
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
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X-129205079-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24129205079
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24129205079
    reference: chr 0
allele count: 1
allele frequency: 1.139432334810797e-5
allele num: 87763
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102034
  ensembl protein: ENSP00000338608
  ensembl transcript: ENST00000335997
  gene symbol: ELF4
  hgvsc: ENST00000335997.7:c.745A>C
  hgvsp: ENSP00000338608.7:p.Lys249Gln
  variant of: http://identifiers.org/hgnc/3319
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102034
  ensembl protein: ENSP00000311280
  ensembl transcript: ENST00000308167
  gene symbol: ELF4
  hgvsc: ENST00000308167.5:c.745A>C
  hgvsp: ENSP00000311280.5:p.Lys249Gln
  variant of: http://identifiers.org/hgnc/3319
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 4
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  variant carriers: 0
hgvs: p.Lys249Gln
num of homozygotes: 0
population: Other
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 633
  num of homozygotes: 0
population: African
population: South Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
reference allele: T
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum

X-129205080-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24129205080
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24129205080
    reference: chr 0
allele count: 2
allele frequency: 2.278838703796545e-5
allele num: 87764
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102034
  ensembl protein: ENSP00000338608
  ensembl transcript: ENST00000335997
  gene symbol: ELF4
  hgvsc: ENST00000335997.7:c.744C>T
  hgvsp: ENST00000335997.7:c.744C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3319
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000102034
  ensembl protein: ENSP00000311280
  ensembl transcript: ENST00000308167
  gene symbol: ELF4
  hgvsc: ENST00000308167.5:c.744C>T
  hgvsp: ENST00000308167.5:c.744C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3319
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1083
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Ser248Ser
num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 4530
  num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: African
population: Latino
population: Other
population: East Asian
reference allele: G
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: QD

X-129205083-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24129205083
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24129205083
    reference: chr 0
allele count: 1
allele frequency: 1.139432334810797e-5
allele num: 87763
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000102034
  ensembl protein: ENSP00000311280
  ensembl transcript: ENST00000308167
  gene symbol: ELF4
  hgvsc: ENST00000308167.5:c.741G>T
  hgvsp: ENST00000308167.5:c.741G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3319
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102034
  ensembl protein: ENSP00000338608
  ensembl transcript: ENST00000335997
  gene symbol: ELF4
  hgvsc: ENST00000335997.7:c.741G>T
  hgvsp: ENST00000335997.7:c.741G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3319
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 640
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Val247Val
num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 10125
  num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: Other
population: African
population: East Asian
reference allele: C
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: QD

X-129205114-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24129205114
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24129205114
    reference: chr 0
allele count: 1
allele frequency: 1.139445318019188e-5
allele num: 87762
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102034
  ensembl protein: ENSP00000311280
  ensembl transcript: ENST00000308167
  gene symbol: ELF4
  hgvsc: ENST00000308167.5:c.710G>T
  hgvsp: ENSP00000311280.5:p.Gly237Val
  variant of: http://identifiers.org/hgnc/3319
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102034
  ensembl protein: ENSP00000338608
  ensembl transcript: ENST00000335997
  gene symbol: ELF4
  hgvsc: ENST00000335997.7:c.710G>T
  hgvsp: ENSP00000338608.7:p.Gly237Val
  variant of: http://identifiers.org/hgnc/3319
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7932
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: p.Gly237Val
num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 1
  allele frequency: 2.083463549805196e-5
  allele num: 47997
  num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: European (Finnish)
population: Other
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
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X-129205144-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24129205144
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24129205144
    reference: chr 0
allele count: 1
allele frequency: 1.139536208763033e-5
allele num: 87755
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102034
  ensembl protein: ENSP00000311280
  ensembl transcript: ENST00000308167
  gene symbol: ELF4
  hgvsc: ENST00000308167.5:c.680A>G
  hgvsp: ENSP00000311280.5:p.Lys227Arg
  variant of: http://identifiers.org/hgnc/3319
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102034
  ensembl protein: ENSP00000338608
  ensembl transcript: ENST00000335997
  gene symbol: ELF4
  hgvsc: ENST00000335997.7:c.680A>G
  hgvsp: ENSP00000338608.7:p.Lys227Arg
  variant of: http://identifiers.org/hgnc/3319
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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hgvs: p.Lys227Arg
num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 4530
  num of homozygotes: 0
population: Other
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: T
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: DP

X-129205152-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24129205152
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24129205152
    reference: chr 0
allele count: 1
allele frequency: 1.139562180210363e-5
allele num: 87753
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000102034
  ensembl protein: ENSP00000311280
  ensembl transcript: ENST00000308167
  gene symbol: ELF4
  hgvsc: ENST00000308167.5:c.672C>T
  hgvsp: ENST00000308167.5:c.672C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3319
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102034
  ensembl protein: ENSP00000338608
  ensembl transcript: ENST00000335997
  gene symbol: ELF4
  hgvsc: ENST00000335997.7:c.672C>T
  hgvsp: ENST00000335997.7:c.672C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3319
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.25e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36246
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Thr224Thr
num of homozygotes: 0
population: Other
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 633
  num of homozygotes: 0
population: East Asian
population: African
population: South Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum

X-129205161-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24129205161
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24129205161
    reference: chr 0
allele count: 1
allele frequency: 1.139679066374909e-5
allele num: 87744
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102034
  ensembl protein: ENSP00000338608
  ensembl transcript: ENST00000335997
  gene symbol: ELF4
  hgvsc: ENST00000335997.7:c.663C>G
  hgvsp: ENSP00000338608.7:p.Asp221Glu
  variant of: http://identifiers.org/hgnc/3319
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102034
  ensembl protein: ENSP00000311280
  ensembl transcript: ENST00000308167
  gene symbol: ELF4
  hgvsc: ENST00000308167.5:c.663C>G
  hgvsp: ENSP00000311280.5:p.Asp221Glu
  variant of: http://identifiers.org/hgnc/3319
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 637
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 479
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 10176
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 2752
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
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  variant carriers: 0
hgvs: p.Asp221Glu
num of homozygotes: 0
population: Other
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 633
  num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Latino
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum

X-129205212-A-AGAGGGGCAGGCCGT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24129205212
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24129205226
    reference: chr 0
allele count: 1
allele frequency: 1.142817960527068e-5
allele num: 87503
alternate allele: AGAGGGGCAGGCCGT
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102034
  ensembl protein: ENSP00000311280
  ensembl transcript: ENST00000308167
  gene symbol: ELF4
  variant of: http://identifiers.org/hgnc/3319
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102034
  ensembl protein: ENSP00000338608
  ensembl transcript: ENST00000335997
  gene symbol: ELF4
  variant of: http://identifiers.org/hgnc/3319
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1678
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
  all individuals: 260
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: c.617-19_617-6dupACGGCCTGCCCCTC
num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 6622
  num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: South Asian
population: Latino
reference allele: A
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: MQ

X-129205215-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24129205215
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24129205215
    reference: chr 0
allele count: 1
allele frequency: 1.144138578064575e-5
allele num: 87402
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102034
  ensembl protein: ENSP00000311280
  ensembl transcript: ENST00000308167
  gene symbol: ELF4
  hgvsc: ENST00000308167.5:c.617-8C>T
  variant of: http://identifiers.org/hgnc/3319
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102034
  ensembl protein: ENSP00000338608
  ensembl transcript: ENST00000335997
  gene symbol: ELF4
  hgvsc: ENST00000335997.7:c.617-8C>T
  variant of: http://identifiers.org/hgnc/3319
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 925
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1672
  bin: 4.25e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: c.617-8C>T
num of homozygotes: 0
population: African
  type: Population
  allele count: 1
  allele frequency: 1.177301624676242e-4
  allele num: 8494
  num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: ReadPosRankSum

X-129205216-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24129205216
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24129205216
    reference: chr 0
allele count: 1
allele frequency: 1.144243311897842e-5
allele num: 87394
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102034
  ensembl protein: ENSP00000338608
  ensembl transcript: ENST00000335997
  gene symbol: ELF4
  hgvsc: ENST00000335997.7:c.617-9C>T
  variant of: http://identifiers.org/hgnc/3319
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102034
  ensembl protein: ENSP00000311280
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  gene symbol: ELF4
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canonical: true
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: European (Finnish)
  type: Population
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  allele frequency: 0.0e0
  allele num: 4502
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population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Other
reference allele: G
site quality: MQRankSum
site quality: BaseQRankSum
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site quality: FS
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X-129205216-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24129205216
    reference: chr 0
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    type: ExactPosition
    position: 24129205216
    reference: chr 0
allele count: 2
allele frequency: 2.288486623795684e-5
allele num: 87394
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102034
  ensembl protein: ENSP00000338608
  ensembl transcript: ENST00000335997
  gene symbol: ELF4
  hgvsc: ENST00000335997.7:c.617-9C>A
  variant of: http://identifiers.org/hgnc/3319
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102034
  ensembl protein: ENSP00000311280
  ensembl transcript: ENST00000308167
  gene symbol: ELF4
  hgvsc: ENST00000308167.5:c.617-9C>A
  variant of: http://identifiers.org/hgnc/3319
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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population: European (Non-Finnish)
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  allele num: 47791
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population: South Asian
population: African
population: European (Finnish)
population: Other
population: Latino
population: East Asian
reference allele: G
site quality: MQRankSum
site quality: ClippingRankSum
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X-129205224-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24129205224
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24129205224
    reference: chr 0
allele count: 2
allele frequency: 2.294025211337072e-5
allele num: 87183
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102034
  ensembl protein: ENSP00000311280
  ensembl transcript: ENST00000308167
  gene symbol: ELF4
  hgvsc: ENST00000308167.5:c.617-17G>A
  variant of: http://identifiers.org/hgnc/3319
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102034
  ensembl protein: ENSP00000338608
  ensembl transcript: ENST00000335997
  gene symbol: ELF4
  hgvsc: ENST00000335997.7:c.617-17G>A
  variant of: http://identifiers.org/hgnc/3319
canonical: true
consequence: intron
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genotype depth: GenotypeDepth
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population: European (Finnish)
population: South Asian
population: Latino
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population: European (Non-Finnish)
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: ReadPosRankSum
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X-129205225-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24129205225
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24129205225
    reference: chr 0
allele count: 1
allele frequency: 1.147697145677199e-5
allele num: 87131
alternate allele: A
annotation: Annotation
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  ensembl gene: ENSG00000102034
  ensembl protein: ENSP00000311280
  ensembl transcript: ENST00000308167
  gene symbol: ELF4
  hgvsc: ENST00000308167.5:c.617-18C>T
  variant of: http://identifiers.org/hgnc/3319
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102034
  ensembl protein: ENSP00000338608
  ensembl transcript: ENST00000335997
  gene symbol: ELF4
  hgvsc: ENST00000335997.7:c.617-18C>T
  variant of: http://identifiers.org/hgnc/3319
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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population: European (Non-Finnish)
population: African
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population: Latino
population: Other
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reference allele: G
site quality: MQ
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site quality: VQSLOD
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site quality: DP
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X-129205228-AGGGGCAGCCTGGGCAGCT-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24129205228
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24129205210
    reference: chr 0
allele count: 5
allele frequency: 5.740330413418596e-5
allele num: 87103
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102034
  ensembl protein: ENSP00000311280
  ensembl transcript: ENST00000308167
  gene symbol: ELF4
  variant of: http://identifiers.org/hgnc/3319
annotation: Annotation
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  consequence: intron_variant
  ensembl gene: ENSG00000102034
  ensembl protein: ENSP00000338608
  ensembl transcript: ENST00000335997
  gene symbol: ELF4
  variant of: http://identifiers.org/hgnc/3319
canonical: true
consequence: intron
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: East Asian
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  allele num: 6581
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population: South Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
reference allele: AGGGGCAGCCTGGGCAGCT
site quality: MQ
site quality: ClippingRankSum
site quality: QD
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X-129205237-C-T
type: Variant
location: Region
  begin: Position
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    position: 24129205237
    reference: chr 0
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    type: ExactPosition
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    reference: chr 0
allele count: 2
allele frequency: 2.305183204435173e-5
allele num: 86761
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102034
  ensembl protein: ENSP00000311280
  ensembl transcript: ENST00000308167
  gene symbol: ELF4
  hgvsc: ENST00000308167.5:c.617-30G>A
  variant of: http://identifiers.org/hgnc/3319
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102034
  ensembl protein: ENSP00000338608
  ensembl transcript: ENST00000335997
  gene symbol: ELF4
  hgvsc: ENST00000335997.7:c.617-30G>A
  variant of: http://identifiers.org/hgnc/3319
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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population: Other
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population: East Asian
population: European (Non-Finnish)
population: African
population: Latino
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population: South Asian
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X-129205248-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24129205248
    reference: chr 0
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    type: ExactPosition
    position: 24129205248
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allele count: 3
allele frequency: 3.468689297937286e-5
allele num: 86488
alternate allele: A
annotation: Annotation
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  gene symbol: ELF4
  hgvsc: ENST00000308167.5:c.617-41C>T
  variant of: http://identifiers.org/hgnc/3319
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102034
  ensembl protein: ENSP00000338608
  ensembl transcript: ENST00000335997
  gene symbol: ELF4
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  variant of: http://identifiers.org/hgnc/3319
canonical: true
consequence: intron
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genotype depth: GenotypeDepth
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population: African
population: East Asian
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site quality: VQSLOD
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site quality: InbreedingCoeff
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X-129205264-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24129205264
    reference: chr 0
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    type: ExactPosition
    position: 24129205264
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allele count: 1
allele frequency: 1.16138623060485e-5
allele num: 86104
alternate allele: C
annotation: Annotation
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  consequence: intron_variant
  ensembl gene: ENSG00000102034
  ensembl protein: ENSP00000311280
  ensembl transcript: ENST00000308167
  gene symbol: ELF4
  hgvsc: ENST00000308167.5:c.616+47C>G
  variant of: http://identifiers.org/hgnc/3319
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102034
  ensembl protein: ENSP00000338608
  ensembl transcript: ENST00000335997
  gene symbol: ELF4
  hgvsc: ENST00000335997.7:c.616+47C>G
  variant of: http://identifiers.org/hgnc/3319
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
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site quality: VQSLOD
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X-129205284-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
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    reference: chr 0
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    type: ExactPosition
    position: 24129205284
    reference: chr 0
allele count: 4
allele frequency: 4.655601852929537e-5
allele num: 85918
alternate allele: T
annotation: Annotation
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  gene symbol: ELF4
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  variant of: http://identifiers.org/hgnc/3319
annotation: Annotation
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  ensembl gene: ENSG00000102034
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  gene symbol: ELF4
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  variant of: http://identifiers.org/hgnc/3319
canonical: true
consequence: intron
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 4340
  num of homozygotes: 0
population: Latino
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Other
population: African
reference allele: C
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum

X-129205290-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24129205290
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24129205290
    reference: chr 0
allele count: 2
allele frequency: 2.324554266719357e-5
allele num: 86038
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000102034
  ensembl protein: ENSP00000311280
  ensembl transcript: ENST00000308167
  gene symbol: ELF4
  hgvsc: ENST00000308167.5:c.616+21G>A
  variant of: http://identifiers.org/hgnc/3319
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000102034
  ensembl protein: ENSP00000338608
  ensembl transcript: ENST00000335997
  gene symbol: ELF4
  hgvsc: ENST00000335997.7:c.616+21G>A
  variant of: http://identifiers.org/hgnc/3319
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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num of homozygotes: 0
population: Other
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 614
  num of homozygotes: 0
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: South Asian
population: East Asian
reference allele: C
site quality: DP
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
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site quality: ReadPosRankSum

X-129205303-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24129205303
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24129205303
    reference: chr 0
allele count: 2
allele frequency: 2.31476123237888e-5
allele num: 86402
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102034
  ensembl protein: ENSP00000338608
  ensembl transcript: ENST00000335997
  gene symbol: ELF4
  hgvsc: ENST00000335997.7:c.616+8C>T
  variant of: http://identifiers.org/hgnc/3319
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000102034
  ensembl protein: ENSP00000311280
  ensembl transcript: ENST00000308167
  gene symbol: ELF4
  hgvsc: ENST00000308167.5:c.616+8C>T
  variant of: http://identifiers.org/hgnc/3319
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 21
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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hgvs: c.616+8C>T
num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 2
  allele frequency: 4.226810660016485e-5
  allele num: 47317
  num of homozygotes: 0
population: South Asian
population: Latino
population: Other
population: European (Finnish)
population: East Asian
population: African
reference allele: G
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD

X-129205330-C-CTTTCTTTCT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24129205330
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24129205339
    reference: chr 0
allele count: 1
allele frequency: 1.153030163269071e-5
allele num: 86728
alternate allele: CTTTCTTTCT
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000102034
  ensembl protein: ENSP00000338608
  ensembl transcript: ENST00000335997
  gene symbol: ELF4
  hgvsc: ENST00000335997.7:c.596_597insAGAAAGAAA
  variant of: http://identifiers.org/hgnc/3319
annotation: Annotation
  canonical: true
  consequence: inframe_insertion
  ensembl gene: ENSG00000102034
  ensembl protein: ENSP00000311280
  ensembl transcript: ENST00000308167
  gene symbol: ELF4
  hgvsc: ENST00000308167.5:c.596_597insAGAAAGAAA
  variant of: http://identifiers.org/hgnc/3319
canonical: true
consequence: inframe insertion
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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hgvs: p.Lys199_Lys200insGluArgLys
num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 4345
  num of homozygotes: 0
population: Other
population: South Asian
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
reference allele: C
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD
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X-129205330-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24129205330
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24129205330
    reference: chr 0
allele count: 1
allele frequency: 1.153030163269071e-5
allele num: 86728
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000102034
  ensembl protein: ENSP00000311280
  ensembl transcript: ENST00000308167
  gene symbol: ELF4
  hgvsc: ENST00000308167.5:c.597G>A
  hgvsp: ENST00000308167.5:c.597G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3319
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000102034
  ensembl protein: ENSP00000338608
  ensembl transcript: ENST00000335997
  gene symbol: ELF4
  hgvsc: ENST00000335997.7:c.597G>A
  hgvsp: ENST00000335997.7:c.597G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3319
canonical: true
consequence: synonymous
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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hgvs: p.Lys199Lys
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population: European (Finnish)
  type: Population
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  allele frequency: 0.0e0
  allele num: 4345
  num of homozygotes: 0
population: South Asian
population: Latino
population: European (Non-Finnish)
population: East Asian
population: African
population: Other
reference allele: C
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
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site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP

X-129205333-C-CTTTCTTTCTTT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24129205333
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24129205344
    reference: chr 0
allele count: 1
allele frequency: 1.152844066311591e-5
allele num: 86742
alternate allele: CTTTCTTTCTTT
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000102034
  ensembl protein: ENSP00000311280
  ensembl transcript: ENST00000308167
  gene symbol: ELF4
  hgvsp: ENSP00000311280.5:p.Ser201GlufsTer64
  variant of: http://identifiers.org/hgnc/3319
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000102034
  ensembl protein: ENSP00000338608
  ensembl transcript: ENST00000335997
  gene symbol: ELF4
  hgvsp: ENSP00000338608.7:p.Ser201GlufsTer64
  variant of: http://identifiers.org/hgnc/3319
canonical: true
consequence: frameshift
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 736
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1356
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1208
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 911
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2262
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20942
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6997
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 952
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21404
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1678
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 373
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 155
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 6.75e1
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genotype quality: GenotypeQuality
  all individuals: 13
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 8.75e1
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genotype quality: GenotypeQuality
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  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 2.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1609
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1023
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40079
  bin: 6.25e1
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genotype quality: GenotypeQuality
  all individuals: 220
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 232
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 287
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 688
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5308
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1673
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Ser201GlufsTer64
num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 4344
  num of homozygotes: 0
population: Other
population: East Asian
population: South Asian
population: African
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: DP
site quality: InbreedingCoeff

X-129205334-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 24129205334
    reference: chr 0
  end: Position
    type: ExactPosition
    position: 24129205334
    reference: chr 0
allele count: 1
allele frequency: 1.152777617669775e-5
allele num: 86747
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000102034
  ensembl protein: ENSP00000338608
  ensembl transcript: ENST00000335997
  gene symbol: ELF4
  hgvsc: ENST00000335997.7:c.593G>A
  hgvsp: ENSP00000338608.7:p.Arg198Lys
  variant of: http://identifiers.org/hgnc/3319
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000102034
  ensembl protein: ENSP00000311280
  ensembl transcript: ENST00000308167
  gene symbol: ELF4
  hgvsc: ENST00000308167.5:c.593G>A
  hgvsp: ENSP00000311280.5:p.Arg198Lys
  variant of: http://identifiers.org/hgnc/3319
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 594
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 912
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1171
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20989
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 686
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Arg198Lys
num of homozygotes: 0
reference allele: C

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 633
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6636
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10122
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8511
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9322
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -2.71e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.62e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.57e-1

QD
type: SiteQuality
SIO_000300: 3.063e1

MQ
type: SiteQuality
SIO_000300: 5.875e1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 4.07e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.94e-1

DP
type: SiteQuality
SIO_000300: 2.60649e6

BaseQRankSum
type: SiteQuality
SIO_000300: -8.87e-1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 633
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8511
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 4.170141784820684e-5
allele num: 47960
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10122
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9321
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.9e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.75e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.21e-1

MQ
type: SiteQuality
SIO_000300: 5.819e1

DP
type: SiteQuality
SIO_000300: 2.606232e6

VQSLOD
type: SiteQuality
SIO_000300: -8.397e-1

FS
type: SiteQuality
SIO_000300: 3.493e0

QD
type: SiteQuality
SIO_000300: 1.24e1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.36e-1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6634
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.084983945623619e-5
allele num: 47962
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8510
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9322
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 633
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.801e0

MQ
type: SiteQuality
SIO_000300: 5.923e1

VQSLOD
type: SiteQuality
SIO_000300: -1.429e-1

QD
type: SiteQuality
SIO_000300: 1.761e1

MQRankSum
type: SiteQuality
SIO_000300: 1.47e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.732e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.4e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.2e-1

DP
type: SiteQuality
SIO_000300: 2.606067e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.66e-1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 633
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.507386192342478e-4
allele num: 6634
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8507
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47955
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10120
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.55e0

QD
type: SiteQuality
SIO_000300: 1.54e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.005e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

FS
type: SiteQuality
SIO_000300: 9.96e-1

VQSLOD
type: SiteQuality
SIO_000300: -4.112e0

MQ
type: SiteQuality
SIO_000300: 5.878e1

DP
type: SiteQuality
SIO_000300: 2.605395e6

MQRankSum
type: SiteQuality
SIO_000300: -1.87e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.141e0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6634
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9319
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 13
allele frequency: 2.710931309171289e-4
allele num: 47954
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8503
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 633
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.903e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.89e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.78e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.58e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.73e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.813e-1

FS
type: SiteQuality
SIO_000300: 5.24e-1

DP
type: SiteQuality
SIO_000300: 2.605187e6

QD
type: SiteQuality
SIO_000300: 2.06e1

VQSLOD
type: SiteQuality
SIO_000300: 9.23e0

European (Non-Finnish)
type: Population
allele count: 8
allele frequency: 1.668578579622484e-4
allele num: 47945
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10115
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8498
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9319
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 633
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 4.45e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.68e-1

MQ
type: SiteQuality
SIO_000300: 5.958e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.053e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.52e-1

QD
type: SiteQuality
SIO_000300: 2.007e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.804e-1

DP
type: SiteQuality
SIO_000300: 2.60309e6

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 4.84e0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9311
num of homozygotes: 0

East Asian
type: Population
allele count: 6
allele frequency: 9.044317154054868e-4
allele num: 6634
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8491
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 633
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47914
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.836e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.355e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.05e0

VQSLOD
type: SiteQuality
SIO_000300: -1.014e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.629e0

DP
type: SiteQuality
SIO_000300: 2.600968e6

MQRankSum
type: SiteQuality
SIO_000300: 9.77e-1

QD
type: SiteQuality
SIO_000300: 1.672e1

MQ
type: SiteQuality
SIO_000300: 5.954e1

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47913
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 633
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6634
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.177578897786152e-4
allele num: 8492
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10109
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -1.578e0

QD
type: SiteQuality
SIO_000300: 1.921e1

VQSLOD
type: SiteQuality
SIO_000300: -9.824000000000001e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.01e0

DP
type: SiteQuality
SIO_000300: 2.600259e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.691e0

MQRankSum
type: SiteQuality
SIO_000300: -1.42e-1

FS
type: SiteQuality
SIO_000300: 2.958e0

MQ
type: SiteQuality
SIO_000300: 5.844e1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 633
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8486
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9310
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6634
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.087464774031938e-5
allele num: 47905
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

QD
type: SiteQuality
SIO_000300: 1.335e1

VQSLOD
type: SiteQuality
SIO_000300: -3.436e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.48e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.552e0

MQRankSum
type: SiteQuality
SIO_000300: 6.13e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.448e0

DP
type: SiteQuality
SIO_000300: 2.59994e6

MQ
type: SiteQuality
SIO_000300: 5.954e1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8480
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 631
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 6.266187651432868e-5
allele num: 47876
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10110
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9308
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.69e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.76e0

MQ
type: SiteQuality
SIO_000300: 5.971e1

VQSLOD
type: SiteQuality
SIO_000300: 4.5e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.16e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.93e-1

FS
type: SiteQuality
SIO_000300: 1.373e0

QD
type: SiteQuality
SIO_000300: 1.858e1

DP
type: SiteQuality
SIO_000300: 2.598414e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.02e-2

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6632
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.088947379415513e-5
allele num: 47871
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 631
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9306
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8478
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.45e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.598094e6

QD
type: SiteQuality
SIO_000300: 2.686e1

VQSLOD
type: SiteQuality
SIO_000300: 1.21e0

MQ
type: SiteQuality
SIO_000300: 5.934e1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10096
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.508523155830442e-4
allele num: 6629
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8472
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9303
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47845
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.595867e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.77e-1

MQ
type: SiteQuality
SIO_000300: 5.88e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.33e-2

MQRankSum
type: SiteQuality
SIO_000300: 7.74e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -9.261e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.643e0

QD
type: SiteQuality
SIO_000300: 1.054e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.0e-2

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 630
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47834
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8465
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.07515320933233e-4
allele num: 9301
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6628
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.98e-1

QD
type: SiteQuality
SIO_000300: 1.348e1

DP
type: SiteQuality
SIO_000300: 2.593909e6

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.077e0

MQRankSum
type: SiteQuality
SIO_000300: -7.79e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.22e-1

MQ
type: SiteQuality
SIO_000300: 5.933e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.2e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -8.97e-1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10087
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8465
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6628
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 630
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9303
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.63e-1

FS
type: SiteQuality
SIO_000300: 2.394e0

MQ
type: SiteQuality
SIO_000300: 5.959e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.788e0

VQSLOD
type: SiteQuality
SIO_000300: 1.27e0

DP
type: SiteQuality
SIO_000300: 2.5935e6

ClippingRankSum
type: SiteQuality
SIO_000300: 8.41e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.79e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.929999999999999e-1

QD
type: SiteQuality
SIO_000300: 2.149e1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.182172833668282e-4
allele num: 8459
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 630
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6627
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10077
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47817
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.591483e6

MQRankSum
type: SiteQuality
SIO_000300: 1.16e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.399999999999999e-3

FS
type: SiteQuality
SIO_000300: 4.521e0

VQSLOD
type: SiteQuality
SIO_000300: 1.22e-1

MQ
type: SiteQuality
SIO_000300: 5.954e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.72e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.708e0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.17e-1

QD
type: SiteQuality
SIO_000300: 1.439e1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 630
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6626
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10064
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47808
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9301
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.712e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.3e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.53e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.63e0

MQRankSum
type: SiteQuality
SIO_000300: 8.41e-1

DP
type: SiteQuality
SIO_000300: 2.58983e6

VQSLOD
type: SiteQuality
SIO_000300: 6.41e-1

QD
type: SiteQuality
SIO_000300: 1.382e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.900000000000001e-3

MQ
type: SiteQuality
SIO_000300: 5.974e1

African
type: Population
allele count: 2
allele frequency: 2.366583836232399e-4
allele num: 8451
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10060
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6628
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9301
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 630
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 1.046112645409658e-4
allele num: 47796
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 8.03e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.35e-1

MQ
type: SiteQuality
SIO_000300: 5.925e1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.350000000000001e-1

MQRankSum
type: SiteQuality
SIO_000300: -6.850000000000001e-1

VQSLOD
type: SiteQuality
SIO_000300: -6.306e-1

FS
type: SiteQuality
SIO_000300: 1.793e0

QD
type: SiteQuality
SIO_000300: 1.517e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.85e-2

DP
type: SiteQuality
SIO_000300: 2.588335e6

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 628
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6626
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47697
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.005935016597928e-4
allele num: 9941
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9294
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4529
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.567261e6

VQSLOD
type: SiteQuality
SIO_000300: 6.67e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.31e-1

MQRankSum
type: SiteQuality
SIO_000300: -5.37e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.871e0

QD
type: SiteQuality
SIO_000300: 1.541e1

MQ
type: SiteQuality
SIO_000300: 5.956e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.9e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.84e-1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6626
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 627
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4529
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9293
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8408
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.007455168245013e-4
allele num: 9926
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.36e0

QD
type: SiteQuality
SIO_000300: 1.606e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.4e0

VQSLOD
type: SiteQuality
SIO_000300: -1.08e-2

MQRankSum
type: SiteQuality
SIO_000300: 5.95e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.29e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -5.35e-1

FS
type: SiteQuality
SIO_000300: 4.037e0

DP
type: SiteQuality
SIO_000300: 2.566144e6

MQ
type: SiteQuality
SIO_000300: 5.955e1

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47686
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8408
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9293
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 625
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9911
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4529
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.66e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.62e-1

QD
type: SiteQuality
SIO_000300: 3.206e1

MQRankSum
type: SiteQuality
SIO_000300: 1.62e0

VQSLOD
type: SiteQuality
SIO_000300: -2.863e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.62e-1

DP
type: SiteQuality
SIO_000300: 2.564061e6

BaseQRankSum
type: SiteQuality
SIO_000300: 9.62e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6628
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9291
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.098371663589055e-5
allele num: 47656
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8403
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 624
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4528
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 5.13e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.09e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 9.8e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.5e-3

MQ
type: SiteQuality
SIO_000300: 5.968e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.6e-1

DP
type: SiteQuality
SIO_000300: 2.552988e6

QD
type: SiteQuality
SIO_000300: 1.5e1

MQRankSum
type: SiteQuality
SIO_000300: 1.64e-1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9290
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8400
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 623
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4529
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.508750754375377e-4
allele num: 6628
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9768
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.547901e6

FS
type: SiteQuality
SIO_000300: 1.3394e1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.87e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.01e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.77e-2

MQRankSum
type: SiteQuality
SIO_000300: -1.182e0

VQSLOD
type: SiteQuality
SIO_000300: -1.769e0

QD
type: SiteQuality
SIO_000300: 9.34e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.71e0

MQ
type: SiteQuality
SIO_000300: 5.978e1

East Asian
type: Population
allele count: 1
allele frequency: 1.509661835748792e-4
allele num: 6624
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47587
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9672
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4467
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9283
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 4.16e0

VQSLOD
type: SiteQuality
SIO_000300: -1.346e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -1.798e0

DP
type: SiteQuality
SIO_000300: 2.541838e6

MQ
type: SiteQuality
SIO_000300: 5.766e1

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.04e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.96e-1

QD
type: SiteQuality
SIO_000300: 1.385e1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6620
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.187789523696401e-4
allele num: 8419
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4529
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47611
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.832e0

VQSLOD
type: SiteQuality
SIO_000300: -2.924e0

MQ
type: SiteQuality
SIO_000300: 5.944e1

FS
type: SiteQuality
SIO_000300: 4.264e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.16e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.264e0

MQRankSum
type: SiteQuality
SIO_000300: 7.9e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

QD
type: SiteQuality
SIO_000300: 2.35e0

DP
type: SiteQuality
SIO_000300: 2.538481e6

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4529
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6627
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.098944231051781e-5
allele num: 47643
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 625
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8433
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.5e-2

DP
type: SiteQuality
SIO_000300: 2.540185e6

VQSLOD
type: SiteQuality
SIO_000300: -1.706e0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.53e0

MQ
type: SiteQuality
SIO_000300: 5.96e1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9632
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4525
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 624
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.371916508538899e-4
allele num: 8432
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6629
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 4.196567208023837e-5
allele num: 47658
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.58e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -1.732e0

DP
type: SiteQuality
SIO_000300: 2.544202e6

VQSLOD
type: SiteQuality
SIO_000300: -1.083e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.23e-1

QD
type: SiteQuality
SIO_000300: 3.9e0

MQ
type: SiteQuality
SIO_000300: 5.959e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.47e-1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9639
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.097623392696075e-5
allele num: 47673
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4528
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9296
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African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8433
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6628
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InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -2.48e-1

FS
type: SiteQuality
SIO_000300: 3.4298e1

QD
type: SiteQuality
SIO_000300: 2.17e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.736e0

DP
type: SiteQuality
SIO_000300: 2.545085e6

MQ
type: SiteQuality
SIO_000300: 5.945e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.6e-2

VQSLOD
type: SiteQuality
SIO_000300: -6.717e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.38e-1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9298
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4528
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 626
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6629
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African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8439
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VQSLOD
type: SiteQuality
SIO_000300: -2.551e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -5.78e-1

MQ
type: SiteQuality
SIO_000300: 5.907e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.589e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

QD
type: SiteQuality
SIO_000300: 4.52e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.22e-1

DP
type: SiteQuality
SIO_000300: 2.546256e6

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

East Asian
type: Population
allele count: 1
allele frequency: 1.509206157561123e-4
allele num: 6626
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 625
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4523
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9298
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.185114956150747e-4
allele num: 8438
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European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 1.048899704210283e-4
allele num: 47669
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MQRankSum
type: SiteQuality
SIO_000300: -1.66e-1

VQSLOD
type: SiteQuality
SIO_000300: -8.692e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.32e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.211e0

MQ
type: SiteQuality
SIO_000300: 5.934e1

FS
type: SiteQuality
SIO_000300: 3.9312e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.13e-1

DP
type: SiteQuality
SIO_000300: 2.546981e6

QD
type: SiteQuality
SIO_000300: 1.8e0

Other
type: Population
allele count: 9
allele frequency: 1.581722319859402e-2
allele num: 569
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European (Finnish)
type: Population
allele count: 79
allele frequency: 1.962732919254659e-2
allele num: 4025
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European (Non-Finnish)
type: Population
allele count: 462
allele frequency: 1.015607825895801e-2
allele num: 45490
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Latino
type: Population
allele count: 11
allele frequency: 1.192024273948851e-3
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African
type: Population
allele count: 158
allele frequency: 2.025641025641026e-2
allele num: 7800
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South Asian
type: Population
allele count: 3
allele frequency: 3.114941335271519e-4
allele num: 9631
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InbreedingCoeff
type: SiteQuality
SIO_000300: -2.35e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -5.421e0

QD
type: SiteQuality
SIO_000300: 1.69e0

MQRankSum
type: SiteQuality
SIO_000300: -4.0e-2

FS
type: SiteQuality
SIO_000300: 2.94289e2

VQSLOD
type: SiteQuality
SIO_000300: -4.102e2

DP
type: SiteQuality
SIO_000300: 2.646606e6

ClippingRankSum
type: SiteQuality
SIO_000300: 5.01e0

MQ
type: SiteQuality
SIO_000300: 5.928e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.712e0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9977
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9316
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 11
allele frequency: 2.306514856052505e-4
allele num: 47691
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6625
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European (Finnish)
type: Population
allele count: 1
allele frequency: 2.208480565371025e-4
allele num: 4528
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 631
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QD
type: SiteQuality
SIO_000300: 1.618e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.74e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.18e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.36e0

DP
type: SiteQuality
SIO_000300: 2.480113e6

FS
type: SiteQuality
SIO_000300: 6.08e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.7e-2

MQ
type: SiteQuality
SIO_000300: 5.97e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.05e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.68e-1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8347
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4528
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9313
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6623
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9975
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 630
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ClippingRankSum
type: SiteQuality
SIO_000300: -7.37e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.87e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

DP
type: SiteQuality
SIO_000300: 2.477072e6

MQRankSum
type: SiteQuality
SIO_000300: 1.63e0

FS
type: SiteQuality
SIO_000300: 5.587e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.95e0

MQ
type: SiteQuality
SIO_000300: 5.981e1

QD
type: SiteQuality
SIO_000300: 1.359e1

VQSLOD
type: SiteQuality
SIO_000300: -1.532e-1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9312
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4529
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6621
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8331
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9971
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European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.099428955324152e-5
allele num: 47632
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ReadPosRankSum
type: SiteQuality
SIO_000300: -9.340000000000001e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 8.539999999999999e0

MQRankSum
type: SiteQuality
SIO_000300: 6.67e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.08e-1

DP
type: SiteQuality
SIO_000300: 2.474546e6

VQSLOD
type: SiteQuality
SIO_000300: -3.696e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -5.196e0

MQ
type: SiteQuality
SIO_000300: 5.98e1

Latino
type: Population
allele count: 3
allele frequency: 3.221649484536082e-4
allele num: 9312
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47618
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6621
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8313
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4528
num of homozygotes: 0

South Asian
type: Population
allele count: 0
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allele num: 9969
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ReadPosRankSum
type: SiteQuality
SIO_000300: 3.3e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.092e0

MQ
type: SiteQuality
SIO_000300: 5.976e1

MQRankSum
type: SiteQuality
SIO_000300: -7.82e-1

DP
type: SiteQuality
SIO_000300: 2.472134e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

FS
type: SiteQuality
SIO_000300: 6.73e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.73e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.81e-1

QD
type: SiteQuality
SIO_000300: 1.422e1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8294
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4528
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9958
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 628
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9307
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European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.1007079385753e-5
allele num: 47603
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FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.934e1

DP
type: SiteQuality
SIO_000300: 2.46597e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.964e0

MQRankSum
type: SiteQuality
SIO_000300: -3.8e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.8e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.8e-1

QD
type: SiteQuality
SIO_000300: 1.293e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.45e-1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8226
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4524
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6616
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9300
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 627
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South Asian
type: Population
allele count: 1
allele frequency: 1.007150770470339e-4
allele num: 9929
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MQRankSum
type: SiteQuality
SIO_000300: 1.8e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.03e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.17e-2

FS
type: SiteQuality
SIO_000300: 2.346e0

DP
type: SiteQuality
SIO_000300: 2.430851e6

MQ
type: SiteQuality
SIO_000300: 5.98e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.92e-1

QD
type: SiteQuality
SIO_000300: 1.649e1

VQSLOD
type: SiteQuality
SIO_000300: 2.91e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.134e0

Latino
type: Population
allele count: 69
allele frequency: 7.422547332185886e-3
allele num: 9296
num of homozygotes: 0

East Asian
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allele count: 0
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African
type: Population
allele count: 0
allele frequency: 0.0e0
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 627
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4524
num of homozygotes: 0

South Asian
type: Population
allele count: 0
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allele num: 9915
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InbreedingCoeff
type: SiteQuality
SIO_000300: 9.88e-2

MQRankSum
type: SiteQuality
SIO_000300: 2.87e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.11e-1

DP
type: SiteQuality
SIO_000300: 2.426687e6

MQ
type: SiteQuality
SIO_000300: 5.973e1

VQSLOD
type: SiteQuality
SIO_000300: 6.22e0

QD
type: SiteQuality
SIO_000300: 1.682e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.16e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.99e-1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 625
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6616
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9920
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4524
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8222
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European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.105662125455349e-5
allele num: 47491
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BaseQRankSum
type: SiteQuality
SIO_000300: -3.17e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.28e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.3e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 6.26e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.76e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.39e-1

DP
type: SiteQuality
SIO_000300: 2.411924e6

QD
type: SiteQuality
SIO_000300: 1.064e1

FS
type: SiteQuality
SIO_000300: 4.419e0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6615
num of homozygotes: 0

Other
type: Population
allele count: 0
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allele num: 625
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African
type: Population
allele count: 0
allele frequency: 0.0e0
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9300
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European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.106194317487731e-5
allele num: 47479
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South Asian
type: Population
allele count: 0
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allele num: 9913
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BaseQRankSum
type: SiteQuality
SIO_000300: -3.42e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.954e1

QD
type: SiteQuality
SIO_000300: 2.375e1

DP
type: SiteQuality
SIO_000300: 2.407735e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.9e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -4.9e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.01e-2

MQRankSum
type: SiteQuality
SIO_000300: 1.12e0

VQSLOD
type: SiteQuality
SIO_000300: -2.229e0

South Asian
type: Population
allele count: 5
allele frequency: 5.06482982171799e-4
allele num: 9872
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African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8190
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European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.108725907806503e-5
allele num: 47422
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 624
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9299
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4521
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.25e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -3.741e0

MQRankSum
type: SiteQuality
SIO_000300: 3.18e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.945e1

QD
type: SiteQuality
SIO_000300: 1.756e1

VQSLOD
type: SiteQuality
SIO_000300: 3.81e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.46e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.22e-1

DP
type: SiteQuality
SIO_000300: 2.390613e6

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9298
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4523
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 625
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South Asian
type: Population
allele count: 3
allele frequency: 3.038590094196293e-4
allele num: 9873
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47425
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 3.31e0

VQSLOD
type: SiteQuality
SIO_000300: -1.63e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.41e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -1.434e0

MQRankSum
type: SiteQuality
SIO_000300: -3.12e-1

QD
type: SiteQuality
SIO_000300: 2.768e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.471e0

DP
type: SiteQuality
SIO_000300: 2.387198e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.06e0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9320
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6638
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 4.168056018672891e-5
allele num: 47984
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8516
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10122
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.34e0

MQRankSum
type: SiteQuality
SIO_000300: 1.3e-2

VQSLOD
type: SiteQuality
SIO_000300: 3.39e0

DP
type: SiteQuality
SIO_000300: 1.97427e6

MQ
type: SiteQuality
SIO_000300: 5.975e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.52e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.54e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -6.024e0

QD
type: SiteQuality
SIO_000300: 2.113e1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8516
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10124
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47987
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 633
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6638
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.81e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 8.25e0

DP
type: SiteQuality
SIO_000300: 1.973993e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.01e-1

FS
type: SiteQuality
SIO_000300: 1.89e0

MQRankSum
type: SiteQuality
SIO_000300: 7.54e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.4e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.178e0

MQ
type: SiteQuality
SIO_000300: 5.989e1

QD
type: SiteQuality
SIO_000300: 2.02e1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 633
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10123
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European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 8.335590889199158e-5
allele num: 47987
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6638
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8516
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.97387e6

VQSLOD
type: SiteQuality
SIO_000300: 9.91e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

FS
type: SiteQuality
SIO_000300: 1.569e0

MQRankSum
type: SiteQuality
SIO_000300: 3.85e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.689e0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.159999999999999e-1

MQ
type: SiteQuality
SIO_000300: 5.971e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.55e-1

QD
type: SiteQuality
SIO_000300: 1.311e1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9322
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47986
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 633
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African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8516
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 9.876543209876543e-5
allele num: 10125
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MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 4.34e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.973509e6

QD
type: SiteQuality
SIO_000300: 3.328e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.24e-2

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10124
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8516
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9322
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.08389772229979e-5
allele num: 47987
num of homozygotes: 0

Other
type: Population
allele count: 0
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allele num: 633
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MQRankSum
type: SiteQuality
SIO_000300: 8.85e-1

VQSLOD
type: SiteQuality
SIO_000300: -3.386e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 3.7e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.094e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.551e0

QD
type: SiteQuality
SIO_000300: 5.4e-1

FS
type: SiteQuality
SIO_000300: 4.601e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.74e0

DP
type: SiteQuality
SIO_000300: 1.973583e6

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 633
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47986
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9321
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.17426021606388e-4
allele num: 8516
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East Asian
type: Population
allele count: 0
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num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.973818e6

FS
type: SiteQuality
SIO_000300: 1.4479e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -4.899e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.022e0

VQSLOD
type: SiteQuality
SIO_000300: -2.115e0

MQRankSum
type: SiteQuality
SIO_000300: 8.38e-1

QD
type: SiteQuality
SIO_000300: 1.51e1

MQ
type: SiteQuality
SIO_000300: 5.913e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.41e0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8516
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6638
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9323
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

South Asian
type: Population
allele count: 0
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allele num: 10125
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Other
type: Population
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QD
type: SiteQuality
SIO_000300: 1.326e1

DP
type: SiteQuality
SIO_000300: 1.974019e6

FS
type: SiteQuality
SIO_000300: 5.89e-1

MQ
type: SiteQuality
SIO_000300: 5.972e1

MQRankSum
type: SiteQuality
SIO_000300: 1.41e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.25e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.956e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.632e0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.38e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.72e-1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 633
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European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.083767451552407e-5
allele num: 47990
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
allele count: 0
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African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8516
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Latino
type: Population
allele count: 0
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allele num: 9323
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 5.7e-1

VQSLOD
type: SiteQuality
SIO_000300: -3.095e0

MQ
type: SiteQuality
SIO_000300: 5.929e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.62e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.15e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.97327e6

BaseQRankSum
type: SiteQuality
SIO_000300: -5.71e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.22e-1

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.083767451552407e-5
allele num: 47990
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9323
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 633
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10124
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6638
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.018e-1

DP
type: SiteQuality
SIO_000300: 1.972939e6

VQSLOD
type: SiteQuality
SIO_000300: 1.063e1

QD
type: SiteQuality
SIO_000300: 3.053e1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.904e1

South Asian
type: Population
allele count: 0
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allele num: 10125
num of homozygotes: 0

Other
type: Population
allele count: 0
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allele num: 633
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6638
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 6.251172094767769e-5
allele num: 47991
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9323
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.17426021606388e-4
allele num: 8516
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.855e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.586e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.732e0

MQ
type: SiteQuality
SIO_000300: 5.963e1

FS
type: SiteQuality
SIO_000300: 1.766e0

QD
type: SiteQuality
SIO_000300: 1.734e1

MQRankSum
type: SiteQuality
SIO_000300: 6.899999999999999e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.26e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.18e-1

DP
type: SiteQuality
SIO_000300: 1.972943e6

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6638
num of homozygotes: 0

African
type: Population
allele count: 0
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allele num: 8516
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10125
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 633
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Latino
type: Population
allele count: 0
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allele num: 9323
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FS
type: SiteQuality
SIO_000300: 3.143e0

MQ
type: SiteQuality
SIO_000300: 5.972e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.55e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.2e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -6.062e0

VQSLOD
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 5.32e0

MQRankSum
type: SiteQuality
SIO_000300: 1.83e0

DP
type: SiteQuality
SIO_000300: 1.972269e6

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
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European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47998
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Other
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allele count: 0
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allele num: 633
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South Asian
type: Population
allele count: 1
allele frequency: 9.876543209876543e-5
allele num: 10125
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African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.072616110693983e-4
allele num: 9323
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.883e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.58e-1

MQ
type: SiteQuality
SIO_000300: 5.954e1

DP
type: SiteQuality
SIO_000300: 1.972136e6

VQSLOD
type: SiteQuality
SIO_000300: 5.44e0

FS
type: SiteQuality
SIO_000300: 4.8e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.9e-1

QD
type: SiteQuality
SIO_000300: 1.778e1

MQRankSum
type: SiteQuality
SIO_000300: -6.68e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.77e0

South Asian
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allele count: 0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 6638
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

African
type: Population
allele count: 0
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Other
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allele count: 0
allele frequency: 0.0e0
allele num: 633
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European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 4.166753474030709e-5
allele num: 47999
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MQRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: -2.253e0

ReadPosRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 2.871e-1

VQSLOD
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.627e1

FS
type: SiteQuality
SIO_000300: 2.764e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.31e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.971917e6

African
type: Population
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num of homozygotes: 0

South Asian
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Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.083420142505938e-5
allele num: 47998
num of homozygotes: 0

East Asian
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allele count: 0
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num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

FS
type: SiteQuality
SIO_000300: 8.98e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.63e-1

DP
type: SiteQuality
SIO_000300: 1.971876e6

QD
type: SiteQuality
SIO_000300: 3.1e0

VQSLOD
type: SiteQuality
SIO_000300: -2.042e0

MQ
type: SiteQuality
SIO_000300: 5.672e1

MQRankSum
type: SiteQuality
SIO_000300: -6.249e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.54e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.029e0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10125
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 47999
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
type: Population
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allele num: 9323
num of homozygotes: 0

Other
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allele count: 0
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allele num: 633
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East Asian
type: Population
allele count: 2
allele frequency: 3.01295570955107e-4
allele num: 6638
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BaseQRankSum
type: SiteQuality
SIO_000300: -8.231999999999999e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.61e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.804e-1

DP
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: -1.586e0

VQSLOD
type: SiteQuality
SIO_000300: 5.32e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.919999999999999e-1

FS
type: SiteQuality
SIO_000300: 1.464e0

QD
type: SiteQuality
SIO_000300: 1.933e1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 2.083420142505938e-5
allele num: 47998
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele num: 633
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African
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East Asian
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allele num: 6638
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ClippingRankSum
type: SiteQuality
SIO_000300: 5.97e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.2e-2

FS
type: SiteQuality
SIO_000300: 2.137e1

VQSLOD
type: SiteQuality
SIO_000300: -3.19e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.0e0

MQ
type: SiteQuality
SIO_000300: 5.98e1

DP
type: SiteQuality
SIO_000300: 1.971441e6

MQRankSum
type: SiteQuality
SIO_000300: -1.355e0

QD
type: SiteQuality
SIO_000300: 1.413e1

African
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num of homozygotes: 0

East Asian
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 9323
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 633
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South Asian
type: Population
allele count: 0
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MQRankSum
type: SiteQuality
SIO_000300: -5.05e-1

BaseQRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.984e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.970998e6

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.12e0

QD
type: SiteQuality
SIO_000300: 1.623e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.44e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.31e-1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 633
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6638
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.174536058256989e-4
allele num: 8514
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9323
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47992
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10125
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MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.8e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 2.8e-2

MQRankSum
type: SiteQuality
SIO_000300: 1.68e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.586e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.79e-1

QD
type: SiteQuality
SIO_000300: 3.035e1

BaseQRankSum
type: SiteQuality
SIO_000300: 9.370000000000001e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.970083e6

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6638
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8514
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10125
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4530
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9323
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.083767451552407e-5
allele num: 47990
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MQRankSum
type: SiteQuality
SIO_000300: 1.11e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

QD
type: SiteQuality
SIO_000300: 1.449e1

FS
type: SiteQuality
SIO_000300: 1.918e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.16e-1

VQSLOD
type: SiteQuality
SIO_000300: -8.309999999999999e-2

MQ
type: SiteQuality
SIO_000300: 5.969e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.16e0

DP
type: SiteQuality
SIO_000300: 1.969586e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.05e0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8512
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European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.084028009336445e-5
allele num: 47984
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 4529
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6638
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9323
num of homozygotes: 0

South Asian
type: Population
allele count: 0
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allele num: 10125
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ReadPosRankSum
type: SiteQuality
SIO_000300: -8.46e-1

FS
type: SiteQuality
SIO_000300: 4.985e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -4.79e-2

DP
type: SiteQuality
SIO_000300: 1.968756e6

MQRankSum
type: SiteQuality
SIO_000300: 6.4e-1

QD
type: SiteQuality
SIO_000300: 1.824e1

BaseQRankSum
type: SiteQuality
SIO_000300: 8.88e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.38e0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 630
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European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.089864158829676e-5
allele num: 47850
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4508
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8496
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10105
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9292
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FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.377e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.24e-2

MQRankSum
type: SiteQuality
SIO_000300: 1.33e-1

QD
type: SiteQuality
SIO_000300: 7.76e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.29e0

DP
type: SiteQuality
SIO_000300: 1.941917e6

VQSLOD
type: SiteQuality
SIO_000300: 4.73e0

MQ
type: SiteQuality
SIO_000300: 5.958e1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4502
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 628
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9284
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47795
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South Asian
type: Population
allele count: 0
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allele num: 10093
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BaseQRankSum
type: SiteQuality
SIO_000300: 1.5e0

MQRankSum
type: SiteQuality
SIO_000300: -1.72e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.5e-3

VQSLOD
type: SiteQuality
SIO_000300: 1.83e0

FS
type: SiteQuality
SIO_000300: 2.496e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.53e0

DP
type: SiteQuality
SIO_000300: 1.931203e6

QD
type: SiteQuality
SIO_000300: 1.211e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.9e-1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8492
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9284
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.092444184051391e-5
allele num: 47791
num of homozygotes: 0

South Asian
type: Population
allele count: 0
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allele num: 10092
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6607
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 626
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MQRankSum
type: SiteQuality
SIO_000300: 3.7e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.642e0

VQSLOD
type: SiteQuality
SIO_000300: -2.131e0

QD
type: SiteQuality
SIO_000300: 2.373e1

FS
type: SiteQuality
SIO_000300: 1.385e0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.4e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.76e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.22e-1

DP
type: SiteQuality
SIO_000300: 1.93064e6

South Asian
type: Population
allele count: 2
allele frequency: 1.981767736821245e-4
allele num: 10092
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8492
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4502
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 626
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9284
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6607
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MQRankSum
type: SiteQuality
SIO_000300: 3.7e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 9.4e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.76e-2

FS
type: SiteQuality
SIO_000300: 1.385e0

DP
type: SiteQuality
SIO_000300: 1.93064e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.22e-1

QD
type: SiteQuality
SIO_000300: 2.373e1

VQSLOD
type: SiteQuality
SIO_000300: -2.131e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.642e0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4486
num of homozygotes: 0

South Asian
type: Population
allele count: 0
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allele num: 10075
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Latino
type: Population
allele count: 2
allele frequency: 2.158428663932657e-4
allele num: 9266
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6584
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47660
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 627
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BaseQRankSum
type: SiteQuality
SIO_000300: 4.14e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.1e0

QD
type: SiteQuality
SIO_000300: 2.424e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 5.33e-1

FS
type: SiteQuality
SIO_000300: 6.106e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.9e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 1.1e0

VQSLOD
type: SiteQuality
SIO_000300: -1.996e0

DP
type: SiteQuality
SIO_000300: 1.900983e6

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47624
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8483
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 2.232142857142857e-4
allele num: 4480
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9261
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 627
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10073
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 5.189e0

VQSLOD
type: SiteQuality
SIO_000300: -2.157e0

QD
type: SiteQuality
SIO_000300: 2.252e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.52e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.74e-2

DP
type: SiteQuality
SIO_000300: 1.893043e6

MQRankSum
type: SiteQuality
SIO_000300: -1.417e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.92e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.33e-1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 625
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European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47620
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8483
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4474
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MQ
type: SiteQuality
SIO_000300: 5.151e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.767e0

QD
type: SiteQuality
SIO_000300: 4.23e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.33e0

DP
type: SiteQuality
SIO_000300: 1.885361e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.14e0

MQRankSum
type: SiteQuality
SIO_000300: -2.941e0

FS
type: SiteQuality
SIO_000300: 6.06e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.5e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.81e-2

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6551
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47413
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.361275088547816e-4
allele num: 8470
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9228
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4445
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10033
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BaseQRankSum
type: SiteQuality
SIO_000300: -4.048e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.42e0

MQRankSum
type: SiteQuality
SIO_000300: 1.45e0

VQSLOD
type: SiteQuality
SIO_000300: 4.64e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.19e-2

FS
type: SiteQuality
SIO_000300: 3.129e0

MQ
type: SiteQuality
SIO_000300: 5.943e1

QD
type: SiteQuality
SIO_000300: 1.714e1

DP
type: SiteQuality
SIO_000300: 1.825868e6

ClippingRankSum
type: SiteQuality
SIO_000300: -6.25e-1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 620
num of homozygotes: 0

South Asian
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allele count: 0
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African
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allele count: 3
allele frequency: 3.550295857988166e-4
allele num: 8450
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 9190
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4420
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.16e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.79e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.55e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.43e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-3

MQ
type: SiteQuality
SIO_000300: 5.966e1

DP
type: SiteQuality
SIO_000300: 1.788283e6

FS
type: SiteQuality
SIO_000300: 1.094e0

QD
type: SiteQuality
SIO_000300: 1.614e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.57e-1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4388
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 1.003310926055985e-4
allele num: 9967
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9160
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47027
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6525
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 611
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VQSLOD
type: SiteQuality
SIO_000300: -4.317e-1

QD
type: SiteQuality
SIO_000300: 2.86e1

MQ
type: SiteQuality
SIO_000300: 5.845e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.8e-3

DP
type: SiteQuality
SIO_000300: 1.733245e6

FS
type: SiteQuality
SIO_000300: 0.0e0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9141
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6538
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 46960
num of homozygotes: 0

South Asian
type: Population
allele count: 4
allele frequency: 4.038364462392731e-4
allele num: 9905
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8419
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VQSLOD
type: SiteQuality
SIO_000300: 8.6e-1

QD
type: SiteQuality
SIO_000300: 1.557e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.800000000000001e-3

MQ
type: SiteQuality
SIO_000300: 5.966e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.354e0

MQRankSum
type: SiteQuality
SIO_000300: 5.51e-1

FS
type: SiteQuality
SIO_000300: 1.113e0

DP
type: SiteQuality
SIO_000300: 1.714209e6

ClippingRankSum
type: SiteQuality
SIO_000300: -8.39e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.2e0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4330
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 4.249351973823992e-5
allele num: 47066
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6546
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.72249e6

QD
type: SiteQuality
SIO_000300: 6.97e0

FS
type: SiteQuality
SIO_000300: 1.3976e1

VQSLOD
type: SiteQuality
SIO_000300: -1.658e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.61e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -1.404e0

MQRankSum
type: SiteQuality
SIO_000300: 1.47e-1

MQ
type: SiteQuality
SIO_000300: 5.934e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.61e-1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9923
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 619
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4334
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6575
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8436
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.655e1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.258e0

DP
type: SiteQuality
SIO_000300: 1.761974e6

FS
type: SiteQuality
SIO_000300: 1.378e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.94e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.09e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -1.01e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.945e-1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 621
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9923
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.103713053539497e-5
allele num: 47535
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8459
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6601
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9244
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.8898e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.67e-2

MQRankSum
type: SiteQuality
SIO_000300: -3.297e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.243e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.305e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.69e0

VQSLOD
type: SiteQuality
SIO_000300: -2.668e0

MQ
type: SiteQuality
SIO_000300: 5.778e1

QD
type: SiteQuality
SIO_000300: 2.79e0

DP
type: SiteQuality
SIO_000300: 1.797397e6

South Asian
type: Population
allele count: 1
allele frequency: 1.007759750075582e-4
allele num: 9923
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9244
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47535
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6601
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8459
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 621
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -3.297e0

QD
type: SiteQuality
SIO_000300: 2.79e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.67e-2

FS
type: SiteQuality
SIO_000300: 2.8898e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.243e0

MQ
type: SiteQuality
SIO_000300: 5.778e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.69e0

VQSLOD
type: SiteQuality
SIO_000300: -2.668e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.305e0

DP
type: SiteQuality
SIO_000300: 1.797397e6

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 619
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6601
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9929
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8465
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.103624545091192e-5
allele num: 47537
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9247
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.37e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.949e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.275e0

VQSLOD
type: SiteQuality
SIO_000300: -2.933e0

QD
type: SiteQuality
SIO_000300: 8.0e-2

MQRankSum
type: SiteQuality
SIO_000300: -2.822e0

FS
type: SiteQuality
SIO_000300: 1.1416e1

MQ
type: SiteQuality
SIO_000300: 5.808e1

DP
type: SiteQuality
SIO_000300: 1.799597e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4